Csa1G423160 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAGATTTGCATGAATTTTACTTTTCAAAAATTGGGAAACTATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACTACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGATCAGCCCTCCCCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAACCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGAAGAATCCCTGTCCGTTGGATCTTAATAATAAAAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAAAGGAAAATCTGCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGGCGAGTTTAG ATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACTACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGATCAGCCCTCCCCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAACCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGAAGAATCCCTGTCCGTTGGATCTTAATAATAAAAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAAAGGAAAATCTGCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGGCGAGTTTAG ATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACTACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGATCAGCCCTCCCCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAACCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGAAGAATCCCTGTCCGTTGGATCTTAATAATAAAAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAAAGGAAAATCTGCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGGCGAGTTTAG MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV*
BLAST of Csa1G423160 vs. TrEMBL
Match: A0A0A0LUL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423160 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 3.5e-98 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Csa1G423160 vs. TrEMBL
Match: M5XJH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019983mg PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 6.4e-20 Identity = 75/188 (39.89%), Postives = 94/188 (50.00%), Query Frame = 1
BLAST of Csa1G423160 vs. TrEMBL
Match: A0A0D2VJS5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G246500 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 7.9e-18 Identity = 63/152 (41.45%), Postives = 84/152 (55.26%), Query Frame = 1
BLAST of Csa1G423160 vs. TrEMBL
Match: B9T4C1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0355980 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.9e-17 Identity = 74/195 (37.95%), Postives = 90/195 (46.15%), Query Frame = 1
BLAST of Csa1G423160 vs. TrEMBL
Match: W9QUR8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012856 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.7e-17 Identity = 67/191 (35.08%), Postives = 89/191 (46.60%), Query Frame = 1
BLAST of Csa1G423160 vs. TAIR10
Match: AT4G25845.1 (AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13 Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of Csa1G423160 vs. NCBI nr
Match: gi|449457253|ref|XP_004146363.1| (PREDICTED: uncharacterized protein LOC101210202 [Cucumis sativus]) HSP 1 Score: 365.5 bits (937), Expect = 5.0e-98 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
BLAST of Csa1G423160 vs. NCBI nr
Match: gi|645234250|ref|XP_008223726.1| (PREDICTED: uncharacterized protein LOC103323510 [Prunus mume]) HSP 1 Score: 106.3 bits (264), Expect = 5.4e-20 Identity = 73/184 (39.67%), Postives = 93/184 (50.54%), Query Frame = 1
BLAST of Csa1G423160 vs. NCBI nr
Match: gi|596266083|ref|XP_007225028.1| (hypothetical protein PRUPE_ppa019983mg [Prunus persica]) HSP 1 Score: 105.5 bits (262), Expect = 9.2e-20 Identity = 75/188 (39.89%), Postives = 94/188 (50.00%), Query Frame = 1
BLAST of Csa1G423160 vs. NCBI nr
Match: gi|1009105392|ref|XP_015887184.1| (PREDICTED: uncharacterized protein LOC107421988 [Ziziphus jujuba]) HSP 1 Score: 103.2 bits (256), Expect = 4.6e-19 Identity = 72/186 (38.71%), Postives = 96/186 (51.61%), Query Frame = 1
BLAST of Csa1G423160 vs. NCBI nr
Match: gi|694438800|ref|XP_009346343.1| (PREDICTED: uncharacterized protein LOC103938068 [Pyrus x bretschneideri]) HSP 1 Score: 99.0 bits (245), Expect = 8.7e-18 Identity = 68/152 (44.74%), Postives = 84/152 (55.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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