Cp4.1LG07g07350 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g07350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionOSBP(Oxysterol binding protein)-related protein 4B, putative
LocationCp4.1LG07 : 6318066 .. 6318620 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATACAACTTTTCATTGGGATGTGAAGAACAAAGTGATATCAAGAACATCTTCAATTGGTTGTTCATCTCGCAGCATTTACTATTGTGGAACACCTGAAGGTGTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAACATCCACCCCCTCAAGACATGCTTCCGCCCCTCACCCCTCCCCCGGCGGTTCTCAGTCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAACCCGACCTCGACCCCTGATAAGGCTTCGGTTTTGGAGGAGAAGCAAGAAGAATGGTAGGAGAGATGCCCGAGCTAGAACTATTGACTATAGTAATGAAGATCATTTTGGTCACTCTGATAAGTTGGAGGCGTTTTCGTTTCTTAGCTCTGATTGTGAGTTCATGACGTCGTCTCGGGATTCTATGTTGTCTTCGCCGTCGTTGTCTTTGTCTTCTTCTTCATCACCATCGTCGTTCTTCGAGTCGTTAACTATACGTCGACGTCTGAGTTGTAATGCTTGGCAAATTAACCGGATTCTAGCGTGTTACCATTGCTAG

mRNA sequence

ATGGATACAACTTTTCATTGGGATGTGAAGAACAAAGTGATATCAAGAACATCTTCAATTGGTTGTTCATCTCGCAGCATTTACTATTGTGGAACACCTGAAGGTGTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAACATCCACCCCCTCAAGACATGCTTCCGCCCCTCACCCCTCCCCCGGCGGTTCTCAGTCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAACCCGACCTCGACCCCTGATAAGGCTTCGGTTTTGGAGGAGAAGCAAGAAGAATGGTAGGAGAGATGCCCGAGCTAGAACTATTGACTATAGTAATGAAGATCATTTTGGTCACTCTGATAAGTTGGAGGCGTTTTCGTTTCTTAGCTCTGATTGTGAGTTCATGACGTCGTCTCGGGATTCTATGTTGTCTTCGCCGTCGTTGTCTTTGTCTTCTTCTTCATCACCATCGTCGTTCTTCGAGTCGTTAACTATACGTCGACGTCTGAGTTGTAATGCTTGGCAAATTAACCGGATTCTAGCGTGTTACCATTGCTAG

Coding sequence (CDS)

ATGGATACAACTTTTCATTGGGATGTGAAGAACAAAGTGATATCAAGAACATCTTCAATTGGTTGTTCATCTCGCAGCATTTACTATTGTGGAACACCTGAAGGTGTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAACATCCACCCCCTCAAGACATGCTTCCGCCCCTCACCCCTCCCCCGGCGGTTCTCAGTCTCGGGTTACCGAAACCGTGCATCGAACAACCGAAAACCCGACCTCGACCCCTGATAAGGCTTCGGTTTTGGAGGAGAAGCAAGAAGAATGGTAGGAGAGATGCCCGAGCTAGAACTATTGACTATAGTAATGAAGATCATTTTGGTCACTCTGATAAGTTGGAGGCGTTTTCGTTTCTTAGCTCTGATTGTGAGTTCATGACGTCGTCTCGGGATTCTATGTTGTCTTCGCCGTCGTTGTCTTTGTCTTCTTCTTCATCACCATCGTCGTTCTTCGAGTCGTTAACTATACGTCGACGTCTGAGTTGTAATGCTTGGCAAATTAACCGGATTCTAGCGTGTTACCATTGCTAG

Protein sequence

MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKNGRRDARARTIDYSNEDHFGHSDKLEAFSFLSSDCEFMTSSRDSMLSSPSLSLSSSSSPSSFFESLTIRRRLSCNAWQINRILACYHC
Homology
[Close]
BLAST of Cp4.1LG07g07350 vs. TrEMBL
Match: A0A0A0LHA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G059740 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-34
Identity = 77/111 (69.37%), Postives = 92/111 (82.88%), Query Frame = 1 

Query: 6   HWDVKNKVISRTSSIGCSSRSIYYCGTP-EGVPFKWETQPGTPKHPPPQDMLPPLTPPPA 65
           HWD+KNKVISRTSSIG SS SIYY GT  +GVPFKWETQPGTPK PPPQD+LPPL+PPPA
Sbjct: 7   HWDMKNKVISRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPPLSPPPA 66

Query: 66  VLSLGLPKPCIEQPKTRPRPLIRLRFWR---RSKKNGRRDARARTIDYSNE 113
           VLSLG+PKP I+QPK+RP P +RLRFW+   +S+  G+  A+  TID+ N+
Sbjct: 67  VLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYND 117

[Close]
BLAST of Cp4.1LG07g07350 vs. TrEMBL
Match: M5XJH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019983mg PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 84/184 (45.65%), Postives = 110/184 (59.78%), Query Frame = 1 

Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGL 70
           N+ +SR  S+GCSSR IYYC + EGVPF WE QPGTP++PP ++ +PP++PPPA LSLGL
Sbjct: 19  NRNLSRNPSVGCSSR-IYYCRSSEGVPFNWEMQPGTPRNPPKEEAIPPISPPPAALSLGL 78

Query: 71  PKPCI-EQPKTRP--RPLIRLRFWRRSKKNGRRDARARTIDYSNEDH-FGHSDKLEAFSF 130
           PKP + +QP  RP   PL RL+FWR+SKKN +R        + N ++  G SDK +   F
Sbjct: 79  PKPYMDQQPNKRPPTSPLPRLKFWRKSKKNKQRKNNV----HDNVNYVVGGSDKFDKVEF 138

Query: 131 LSSDCEFMTSS---RDSMLSSPSLSLS--------SSSSPSSFFESLTIRRRLSCNAWQI 180
            SSD EFM S+     S  SS S S S        SS   +   ES +     SC+ W+ 
Sbjct: 139 CSSDSEFMASTSPQNSSPSSSSSFSFSKGRLSRQCSSLQSTQARESFSSSGHFSCSPWKF 197

[Close]
BLAST of Cp4.1LG07g07350 vs. TrEMBL
Match: B9N307_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s18290g PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-24
Identity = 84/186 (45.16%), Postives = 108/186 (58.06%), Query Frame = 1 

Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGL 70
           N+VISR SS+GCSSR +YY  + EGVPFKWE QPGTPK PP ++ +PP+ PPPA+L +GL
Sbjct: 26  NRVISRNSSVGCSSRILYY-RSAEGVPFKWEMQPGTPKDPPKEESIPPIRPPPALLGIGL 85

Query: 71  PKPCIE--QPKTRPRPLIRLRFWRRSKKNGR-----RDARARTIDYSNEDHFGHSDKLEA 130
           PKPCI+   PKT  R   R  FW+  KKN R     R ++   I  +N++    SDK E 
Sbjct: 86  PKPCIDIKGPKTSMRSRFRFWFWKHIKKNKRNEKPQRGSQGNDIINANDE----SDKFEM 145

Query: 131 FSFLSSDCEFMT----SSRDSMLSSPSLSLSSSSSP--SSFFESLTIRRRL----SCNAW 180
           F F SSD +F +    +S  S  SS SL  S+  S   S  FES + R  +     C  W
Sbjct: 146 FEFYSSDGDFNSFSPRNSSPSSSSSSSLYFSNGHSRKLSRIFESASARDSMQKPHGCIPW 205

[Close]
BLAST of Cp4.1LG07g07350 vs. TrEMBL
Match: W9QUR8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012856 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.5e-24
Identity = 86/191 (45.03%), Postives = 111/191 (58.12%), Query Frame = 1 

Query: 11  NKVISRTSSIG-CSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLG 70
           NK+I+R SS+G CSSR  YY    EG+PF+WE QPGTPK  P ++ +PPL+PPPA+LSLG
Sbjct: 18  NKMITRNSSVGACSSRIYYYRSAGEGIPFQWEMQPGTPKDLPKEEAIPPLSPPPAILSLG 77

Query: 71  LPKPCIEQPKTRPRPLIRLRFWRRSKK----------NGRRDARARTID-YSNEDHFGHS 130
           LPKPCI   + +PR   +L+FWR + K          +G+     ++ID  +  D+  H 
Sbjct: 78  LPKPCINFEEPKPRSRSKLKFWRNNSKGKITLQVKKISGQATKNNQSIDGITACDYKDH- 137

Query: 131 DKLEAFSFLSSDCEFMTSS--RD-SMLSSPSLSLS------SSSSPSSFFESLTIRRRLS 181
              E F F SSDCEFM SS  RD S  SS SLS S      SS   S  +        +S
Sbjct: 138 ---EKFDFCSSDCEFMASSPMRDSSSSSSSSLSFSNGHSRQSSRLQSPAWHPPNRSSLIS 197

[Close]
BLAST of Cp4.1LG07g07350 vs. TrEMBL
Match: V4UVA7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010707mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-23
Identity = 83/207 (40.10%), Postives = 114/207 (55.07%), Query Frame = 1 

Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGL 70
           NKV+SR SS+GCSSR++YY    EGVPFKWE QPG PK PP +D++PPL+PPPAVLSLGL
Sbjct: 20  NKVLSRGSSVGCSSRALYYISNTEGVPFKWEMQPGKPKEPPKEDIIPPLSPPPAVLSLGL 79

Query: 71  PKPCIEQPKTRPR----PLIRLRFWRRSKK--------------NGRRDARARTIDYSNE 130
           PKP IE+P +  +      I+L FW++++K               G  ++   +I + N+
Sbjct: 80  PKPAIEEPPSNNKASILKSIKLMFWKQNRKGQGVLLNKNKYVIQKGSNNSNKGSIAHVND 139

Query: 131 DHFGHSDKLEAFSFLSSDC---EFMTSSRDSMLSSPSLSLSS----------SSSPSSFF 181
             F  S++   F + SSD    EF  SSR+S  SS + S  S           SS SS  
Sbjct: 140 --FSSSEESVNFEYYSSDDIGEEFTASSRNSSSSSSNYSSFSFCNNNNNNAHHSSQSSSR 199

[Close]
BLAST of Cp4.1LG07g07350 vs. TAIR10
Match: AT4G25845.1 (AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2))

HSP 1 Score: 74.7 bits (182), Expect = 6.6e-14
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 1 

Query: 14 ISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGLPKP 73
          ISR SS+G     +     PEGVPF+WE QPGTP +  P++++PPL+PPPA+LSLGLPKP
Sbjct: 12 ISRNSSVGYYDERM-----PEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74 --CIEQPKTRPRPL-IRLRFWR 93
             IE+PK    P  ++LR W+
Sbjct: 72 SISIEEPKNFVFPTKLKLRNWK 88

[Close]
BLAST of Cp4.1LG07g07350 vs. TAIR10
Match: AT5G01790.1 (AT5G01790.1 unknown protein)

HSP 1 Score: 48.1 bits (113), Expect = 6.6e-06
Identity = 34/86 (39.53%), Postives = 43/86 (50.00%), Query Frame = 1 

Query: 19  SIGCSS-RSIYYCGTPEGVPFKWETQPGTPKHPPPQ-DMLPPLTPPPAVLSLGLPKPCIE 78
           S  C S R  YY G    VPF+WE+ PGTPKHP  +   LPPLTPPP+  S    +    
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRR 116

Query: 79  QPKTRPRPLIRL---RFWRRSKKNGR 100
             K+  + L  +    FW     NG+
Sbjct: 117 SKKSTKKILALIPTRLFWLSGDHNGK 142

[Close]
BLAST of Cp4.1LG07g07350 vs. NCBI nr
Match: gi|659069759|ref|XP_008451658.1| (PREDICTED: uncharacterized protein LOC103492889 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 5.4e-50
Identity = 119/192 (61.98%), Postives = 137/192 (71.35%), Query Frame = 1 

Query: 5   FHWDVKNKVISRTSSIGCSSRSIYYCGTP-EGVPFKWETQPGTPKHPPPQDMLPPLTPPP 64
           FHWD+KNKVISRTSSIGCSS SIYY GT  +GVPFKWETQPGTPK PPPQD+LPPL+PPP
Sbjct: 6   FHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPPLSPPP 65

Query: 65  AVLSLGLPKP-CIEQPKTRPRPLIRLRFWRR--SKKNGRRDARARTIDYSNEDHFGHSDK 124
           AVLSLG+PKP CI+QPK+R  P +RLRFW++    ++G R A+   ID+ N       DK
Sbjct: 66  AVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDHYN-------DK 125

Query: 125 LEAFSFLSSDCEFMTSSRDSMLSSPSLSLSSSSSPSSFFESLTI---------RRRLSCN 184
           LE FSFLSSDCEFM S       S S + SSSSSPSSF +SL +         R     N
Sbjct: 126 LETFSFLSSDCEFMASPSPRDPMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRPSSWNN 185

[Close]
BLAST of Cp4.1LG07g07350 vs. NCBI nr
Match: gi|700206024|gb|KGN61143.1| (hypothetical protein Csa_2G059740 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 3.2e-34
Identity = 77/111 (69.37%), Postives = 92/111 (82.88%), Query Frame = 1 

Query: 6   HWDVKNKVISRTSSIGCSSRSIYYCGTP-EGVPFKWETQPGTPKHPPPQDMLPPLTPPPA 65
           HWD+KNKVISRTSSIG SS SIYY GT  +GVPFKWETQPGTPK PPPQD+LPPL+PPPA
Sbjct: 7   HWDMKNKVISRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPPLSPPPA 66

Query: 66  VLSLGLPKPCIEQPKTRPRPLIRLRFWR---RSKKNGRRDARARTIDYSNE 113
           VLSLG+PKP I+QPK+RP P +RLRFW+   +S+  G+  A+  TID+ N+
Sbjct: 67  VLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYND 117

[Close]
BLAST of Cp4.1LG07g07350 vs. NCBI nr
Match: gi|645234250|ref|XP_008223726.1| (PREDICTED: uncharacterized protein LOC103323510 [Prunus mume])

HSP 1 Score: 125.6 bits (314), Expect = 9.2e-26
Identity = 83/182 (45.60%), Postives = 110/182 (60.44%), Query Frame = 1 

Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGL 70
           N+ +SR  S+GCSSR IYYC + EGVPF WE QPGTP++PP ++ +PP++PPPA +SLGL
Sbjct: 27  NRNLSRNPSVGCSSR-IYYCRSSEGVPFNWEMQPGTPRNPPKEEAIPPISPPPAAVSLGL 86

Query: 71  PKPCI-EQPKTRP--RPLIRLRFWRRSKKNGRRDARAR-TIDYSNEDHFGHSDKLEAFSF 130
           PKP + +QP  RP   PL RL+FWR+SKKN +R       ++Y      G SDK +   F
Sbjct: 87  PKPYMDQQPNKRPPTSPLPRLKFWRKSKKNKQRKNNVNDNVNYV----VGGSDKFDKVEF 146

Query: 131 LSSDCEFM--------TSSRDSMLSSPSLSLSSSSSPSS-FFESLTIRRRLSCNAWQINR 180
            SSD EFM        +SS  S  S   LS   SS  S+   ES +     SC+ W+ + 
Sbjct: 147 CSSDTEFMASTSPLNSSSSSSSSFSKGRLSRQCSSLQSTQARESFSSSGHFSCSPWKFSS 203

[Close]
BLAST of Cp4.1LG07g07350 vs. NCBI nr
Match: gi|596266083|ref|XP_007225028.1| (hypothetical protein PRUPE_ppa019983mg [Prunus persica])

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-25
Identity = 84/184 (45.65%), Postives = 110/184 (59.78%), Query Frame = 1 

Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGL 70
           N+ +SR  S+GCSSR IYYC + EGVPF WE QPGTP++PP ++ +PP++PPPA LSLGL
Sbjct: 19  NRNLSRNPSVGCSSR-IYYCRSSEGVPFNWEMQPGTPRNPPKEEAIPPISPPPAALSLGL 78

Query: 71  PKPCI-EQPKTRP--RPLIRLRFWRRSKKNGRRDARARTIDYSNEDH-FGHSDKLEAFSF 130
           PKP + +QP  RP   PL RL+FWR+SKKN +R        + N ++  G SDK +   F
Sbjct: 79  PKPYMDQQPNKRPPTSPLPRLKFWRKSKKNKQRKNNV----HDNVNYVVGGSDKFDKVEF 138

Query: 131 LSSDCEFMTSS---RDSMLSSPSLSLS--------SSSSPSSFFESLTIRRRLSCNAWQI 180
            SSD EFM S+     S  SS S S S        SS   +   ES +     SC+ W+ 
Sbjct: 139 CSSDSEFMASTSPQNSSPSSSSSFSFSKGRLSRQCSSLQSTQARESFSSSGHFSCSPWKF 197

[Close]
BLAST of Cp4.1LG07g07350 vs. NCBI nr
Match: gi|1009105392|ref|XP_015887184.1| (PREDICTED: uncharacterized protein LOC107421988 [Ziziphus jujuba])

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-25
Identity = 81/185 (43.78%), Postives = 107/185 (57.84%), Query Frame = 1 

Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKHPPPQDMLPPLTPPPAVLSLGL 70
           N++ISR S++GCSSR +YY  + EG+PF+WE QPGTPK PP ++ LPPL+PPPAV+SLGL
Sbjct: 24  NRIISRNSTVGCSSR-VYYYRSSEGIPFEWEMQPGTPKDPPKEEALPPLSPPPAVISLGL 83

Query: 71  PKPCI--EQPKTRPRPLIRLRFWRRSKKNGRRDARARTIDYSNEDHFGHSDKLEAFSFLS 130
           PKPCI   +PKT  R +  +RFW++ KKN +    ++  +    D    +   E   F  
Sbjct: 84  PKPCILNLEPKTPSRSIWLIRFWKKCKKN-KHKISSKFENNVGGDLQSDNKYYEKEEFCG 143

Query: 131 SDCEFMTSSRDSMLSSPSLSLSSSSSPSSFFESL--------------TIRRRLSCNAWQ 180
           SD EFM S R S       S SSSSSP SF                  + RR LSC+ W 
Sbjct: 144 SDHEFMASQRHS-------STSSSSSPMSFSNGFDMESSSRMRSPARDSFRRPLSCSPWN 199

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g07350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG07g07350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHA2_CUCSA2.2e-3469.37Uncharacterized protein OS=Cucumis sativus GN=Csa_2G059740 PE=4 SV=1[more]
M5XJH2_PRUPE1.1e-2545.65Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019983mg PE=4 SV=1[more]
B9N307_POPTR2.1e-2445.16Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s18290g PE=4 SV=1[more]
W9QUR8_9ROSA3.5e-2445.03Uncharacterized protein OS=Morus notabilis GN=L484_012856 PE=4 SV=1[more]
V4UVA7_9ROSI5.1e-2340.10Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010707mg PE=4 SV=1[more]
BLAST of Cp4.1LG07g07350 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25845.16.6e-1452.44 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding p... [more]
AT5G01790.16.6e-0639.53 unknown protein[more]
BLAST of Cp4.1LG07g07350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069759|ref|XP_008451658.1|5.4e-5061.98PREDICTED: uncharacterized protein LOC103492889 [Cucumis melo][more]
gi|700206024|gb|KGN61143.1|3.2e-3469.37hypothetical protein Csa_2G059740 [Cucumis sativus][more]
gi|645234250|ref|XP_008223726.1|9.2e-2645.60PREDICTED: uncharacterized protein LOC103323510 [Prunus mume][more]
gi|596266083|ref|XP_007225028.1|1.6e-2545.65hypothetical protein PRUPE_ppa019983mg [Prunus persica][more]
gi|1009105392|ref|XP_015887184.1|2.1e-2543.78PREDICTED: uncharacterized protein LOC107421988 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007789DUF688
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g07350.1Cp4.1LG07g07350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007789Protein of unknown function DUF688PFAMPF05097DUF688coord: 33..134
score: 4.
NoneNo IPR availablePANTHERPTHR33257FAMILY NOT NAMEDcoord: 11..169
score: 4.1
NoneNo IPR availablePANTHERPTHR33257:SF6SUBFAMILY NOT NAMEDcoord: 11..169
score: 4.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g07350Cucsa.089310Cucumber (Gy14) v1cgycpeB0179
Cp4.1LG07g07350CmaCh05G006880Cucurbita maxima (Rimu)cmacpeB790
Cp4.1LG07g07350CmoCh05G007230Cucurbita moschata (Rifu)cmocpeB743
Cp4.1LG07g07350CmoCh11G003870Cucurbita moschata (Rifu)cmocpeB140
Cp4.1LG07g07350CmoCh12G008920Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g07350Cla022818Watermelon (97103) v1cpewmB814
Cp4.1LG07g07350Csa1G423160Cucumber (Chinese Long) v2cpecuB807
Cp4.1LG07g07350Csa2G059740Cucumber (Chinese Long) v2cpecuB811
Cp4.1LG07g07350MELO3C004021Melon (DHL92) v3.5.1cpemeB777
Cp4.1LG07g07350ClCG11G012130Watermelon (Charleston Gray)cpewcgB723
Cp4.1LG07g07350CSPI02G06050Wild cucumber (PI 183967)cpecpiB812
Cp4.1LG07g07350CSPI01G20300Wild cucumber (PI 183967)cpecpiB807
Cp4.1LG07g07350Lsi11G007600Bottle gourd (USVL1VR-Ls)cpelsiB654
Cp4.1LG07g07350MELO3C004021.2Melon (DHL92) v3.6.1cpemedB913
Cp4.1LG07g07350CsaV3_2G008430Cucumber (Chinese Long) v3cpecucB1005
Cp4.1LG07g07350CsaV3_1G031620Cucumber (Chinese Long) v3cpecucB0999
Cp4.1LG07g07350Bhi06G001116Wax gourdcpewgoB1018
Cp4.1LG07g07350CsGy2G006170Cucumber (Gy14) v2cgybcpeB261
Cp4.1LG07g07350Carg09028Silver-seed gourdcarcpeB0848
Cp4.1LG07g07350Carg24221Silver-seed gourdcarcpeB1382
Cp4.1LG07g07350Carg27569Silver-seed gourdcarcpeB0321
Cp4.1LG07g07350Carg08376Silver-seed gourdcarcpeB0089
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g07350Cp4.1LG11g06410Cucurbita pepo (Zucchini)cpecpeB150
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g07350Wax gourdcpewgoB1071
Cp4.1LG07g07350Cucurbita pepo (Zucchini)cpecpeB142
Cp4.1LG07g07350Cucurbita pepo (Zucchini)cpecpeB499
Cp4.1LG07g07350Cucurbita maxima (Rimu)cmacpeB163
Cp4.1LG07g07350Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g07350Bottle gourd (USVL1VR-Ls)cpelsiB681
Cp4.1LG07g07350Watermelon (Charleston Gray)cpewcgB745
Cp4.1LG07g07350Watermelon (97103) v1cpewmB820
Cp4.1LG07g07350Melon (DHL92) v3.5.1cpemeB749
Cp4.1LG07g07350Cucumber (Gy14) v2cgybcpeB145
Cp4.1LG07g07350Melon (DHL92) v3.6.1cpemedB888