Carg27569 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27569
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	OSBP(Oxysterol binding protein)-related protein 4B, putative
Location	Cucurbita_argyrosperma_scaffold_441 : 76448 .. 77002 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACAACTTTTCATTGGGATGTGAAGAACAAAGTGATATCAAGAACATCTTCAATTGGTTGCTCTTCTCGCAGCATTTACTATTGTGGAACACCTGAAGGTGTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAAGATCCACCCCCTCAAGACATGCTTCCGCCCCTCACCCCTCCCCCGGCGGTTCTCAGTCTCGGGTTACCGAAACCGTGTATCGAACAACCGAAAACCCGACCTCGACCCCTGATAAGGCTTCGGTTTTGGAGGAGAAGCAAGAAGAATGGTAAGAGAGATGCCCGAGCTAGAACTATTGACTATAGTAATGAAGATCGTTTTGGTCACCCTGATAAGTTGGAGACGTTTTCGTTTCTTAGCTCTGATTGTGAGTTCATGACATCGTCTCGGAATTCTATGTCGTCGTCGCCGTCGTTGTCTTTGTCTTCTTCTTCATCACCATCGTCATTCTTCGAGTCGTTAACTGTACGTCGACGTCTGAATTGTAATGCTTGGCAAATTAACCGGATTCTAGCTTGTTACCATTGCTAG

mRNA sequence

ATGGATACAACTTTTCATTGGGATGTGAAGAACAAAGTGATATCAAGAACATCTTCAATTGGTTGCTCTTCTCGCAGCATTTACTATTGTGGAACACCTGAAGGTGTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAAGATCCACCCCCTCAAGACATGCTTCCGCCCCTCACCCCTCCCCCGGCGGTTCTCAGTCTCGGGTTACCGAAACCGTGTATCGAACAACCGAAAACCCGACCTCGACCCCTGATAAGGCTTCGGTTTTGGAGGAGAAGCAAGAAGAATGGTAAGAGAGATGCCCGAGCTAGAACTATTGACTATAGTAATGAAGATCGTTTTGGTCACCCTGATAAGTTGGAGACGTTTTCGTTTCTTAGCTCTGATTGTGAGTTCATGACATCGTCTCGGAATTCTATGTCGTCGTCGCCGTCGTTGTCTTTGTCTTCTTCTTCATCACCATCGTCATTCTTCGAGTCGTTAACTGTACGTCGACGTCTGAATTGTAATGCTTGGCAAATTAACCGGATTCTAGCTTGTTACCATTGCTAG

Coding sequence (CDS)

ATGGATACAACTTTTCATTGGGATGTGAAGAACAAAGTGATATCAAGAACATCTTCAATTGGTTGCTCTTCTCGCAGCATTTACTATTGTGGAACACCTGAAGGTGTCCCTTTCAAATGGGAAACACAGCCAGGAACTCCCAAAGATCCACCCCCTCAAGACATGCTTCCGCCCCTCACCCCTCCCCCGGCGGTTCTCAGTCTCGGGTTACCGAAACCGTGTATCGAACAACCGAAAACCCGACCTCGACCCCTGATAAGGCTTCGGTTTTGGAGGAGAAGCAAGAAGAATGGTAAGAGAGATGCCCGAGCTAGAACTATTGACTATAGTAATGAAGATCGTTTTGGTCACCCTGATAAGTTGGAGACGTTTTCGTTTCTTAGCTCTGATTGTGAGTTCATGACATCGTCTCGGAATTCTATGTCGTCGTCGCCGTCGTTGTCTTTGTCTTCTTCTTCATCACCATCGTCATTCTTCGAGTCGTTAACTGTACGTCGACGTCTGAATTGTAATGCTTGGCAAATTAACCGGATTCTAGCTTGTTACCATTGCTAG

Protein sequence

MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLTPPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKNGKRDARARTIDYSNEDRFGHPDKLETFSFLSSDCEFMTSSRNSMSSSPSLSLSSSSSPSSFFESLTVRRRLNCNAWQINRILACYHC

Homology

[Close]

BLAST of Carg27569 vs. NCBI nr
Match: XP_022938321.1 (putative protein TPRXL [Cucurbita moschata])

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87
Identity = 167/180 (92.78%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60
           MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT
Sbjct: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60

Query: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKNGKRDARARTIDYSNEDRFGHPDK 120
           PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKNGKRDARARTIDYSNEDRFG+PDK
Sbjct: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKNGKRDARARTIDYSNEDRFGNPDK 120

Query: 121 LETFSFLSSDCEFMTSSRNSMXXXXXXXXXXXXXXXSFFESLTVRRRLNCNAWQINRILA 180
           LETFSFLSSDCEFMTSSRNSM        XXXX   SFFESLTVRRRL+CNAWQINRILA
Sbjct: 121 LETFSFLSSDCEFMTSSRNSMLSSPSLSLXXXXSPSSFFESLTVRRRLSCNAWQINRILA 180

[Close]

BLAST of Carg27569 vs. NCBI nr
Match: XP_022929606.1 (uncharacterized protein LOC111436141 [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 5.7e-56
Identity = 135/194 (69.59%), Postives = 151/194 (77.84%), Query Frame = 0


Query: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60
           MD  FHWD+K+KVI+RTSSIGCSSRS YYCG  EGVPFKWETQPGTPKDPPPQD+LPPL+
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKK--NGKRDARARTIDYSNEDRFGHP 120
           PPPAV+SLGLP PCIE+PKTRPRP ++L FWRR KK  +G R A+A TIDYSN       
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYSN------- 120

Query: 121 DKLETFSFLSSDCEFMTSSRNSMXXXXXXXXXXXXXXXSFFESLTVR--------RRLNC 180
           DKLETFSFLSSDCEFM S R+SM     XXXXXXXXXX   ESLTVR        R  +C
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM-----XXXXXXXXXXXLIESLTVRNMGRVSLGRPSSC 180

Query: 181 N-AWQINRILACYH 184
           + A +I+RILACYH
Sbjct: 181 STAGKIHRILACYH 182

[Close]

BLAST of Carg27569 vs. NCBI nr
Match: XP_023546389.1 (uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.9 bits (572), Expect = 2.2e-55
Identity = 133/194 (68.56%), Postives = 150/194 (77.32%), Query Frame = 0


Query: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60
           MD  FHWD+K+KVI+RTSSIGCSSRS YYCG  EGVPF WETQPGTPKDPPPQD+LPPL+
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFVWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKK--NGKRDARARTIDYSNEDRFGHP 120
           PPPAV+SLGLP PCIE+PKTRPRP ++LRFWRR KK  +G R A+A TIDYSN       
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYSN------- 120

Query: 121 DKLETFSFLSSDCEFMTSSRNSMXXXXXXXXXXXXXXXSFFESLTVR--------RRLNC 180
           DKLETFSFLSSDCEFM S R+SM      XXXXXXXXX   ESLTV+        R  +C
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSM-----SXXXXXXXXXXXXESLTVQNMGRASLGRPSSC 180

Query: 181 N-AWQINRILACYH 184
           + A +I+RILACYH
Sbjct: 181 STAGKIHRILACYH 182

[Close]

BLAST of Carg27569 vs. NCBI nr
Match: XP_022997465.1 (uncharacterized protein LOC111492375 [Cucurbita maxima])

HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55
Identity = 138/194 (71.13%), Postives = 152/194 (78.35%), Query Frame = 0


Query: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60
           MD  FHWD+K+KVI+RTSSIGCSSRS YYCG  EGVPFKWETQPGTPKDPPPQD+LPPL+
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKK--NGKRDARARTIDYSNEDRFGHP 120
           PPPAVLSLGLP PCIE+PKTRPRP ++LRFWRR KK  +  R A+A TIDYSN       
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYSN------- 120

Query: 121 DKLETFSFLSSDCEFMTSSRNSMXXXXXXXXXXXXXXXSFFESLTVR--------RRLNC 180
            KLETFSFLSSDCEFM S R+SM  XXXXXXXXXXXXX   ESLTVR        R  +C
Sbjct: 121 GKLETFSFLSSDCEFMASPRDSM--XXXXXXXXXXXXXXXIESLTVRHMGRVSLGRPSSC 180

Query: 181 -NAWQINRILACYH 184
             A +I+RILACYH
Sbjct: 181 GTAGKIHRILACYH 185

[Close]

BLAST of Carg27569 vs. NCBI nr
Match: XP_022153305.1 (uncharacterized protein LOC111020830 [Momordica charantia])

HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 129/187 (68.98%), Postives = 142/187 (75.94%), Query Frame = 0


Query: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60
           MD  FHWD K+KVISRTSS+GCSSRSIYYCGT EGVPFKWETQPGTPKDPPPQ+MLPPL+
Sbjct: 1   MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPLS 60

Query: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRRSKKNGKRDARARTIDYSNEDRFGHPDK 120
           PPPAVLSLGLPKPCIE+P  RPR  + LRFWR+S+K  KR+         N D FGHPDK
Sbjct: 61  PPPAVLSLGLPKPCIERPNPRPRLRMSLRFWRKSEK--KRE---------NGDGFGHPDK 120

Query: 121 LETFSFLSSDCEFMTSSRNSMXXXXXXXXXXXXXXXSFFESLTVRRRLNCN---AWQINR 180
           LET SF+SSD EFM S R+S+     XXXXXXXXXX   ESL VR     +    WQINR
Sbjct: 121 LETSSFMSSDGEFMASPRDSV--SSLXXXXXXXXXXXLLESLNVRNMGRVSFGRPWQINR 174

Query: 181 ILACYHC 185
            LACYHC
Sbjct: 181 FLACYHC 174

[Close]

BLAST of Carg27569 vs. TAIR10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2))

HSP 1 Score: 74.3 bits (181), Expect = 8.6e-14
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 14 ISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLTPPPAVLSLGLPKP 73
          ISR SS+G      Y    PEGVPF+WE QPGTP +  P++++PPL+PPPA+LSLGLPKP
Sbjct: 12 ISRNSSVG-----YYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74 --CIEQPKTRPRPL-IRLRFWR 93
             IE+PK    P  ++LR W+
Sbjct: 72 SISIEEPKNFVFPTKLKLRNWK 88

[Close]

BLAST of Carg27569 vs. TAIR10
Match: AT5G01790.1 (unknown protein)

HSP 1 Score: 45.4 bits (106), Expect = 4.3e-05
Identity = 34/89 (38.20%), Postives = 43/89 (48.31%), Query Frame = 0


Query: 15  SRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQ-DMLPPLTPPPAVLSLGLPKP 74
           S  S+   S R  YY G    VPF+WE+ PGTPK P  +   LPPLTPPP+  S    + 
Sbjct: 54  SSVSAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQI 113

Query: 75  CIEQPKTRPRPLIRL---RFWRRSKKNGK 100
                K+  + L  +    FW     NGK
Sbjct: 114 RRRSKKSTKKILALIPTRLFWLSGDHNGK 142

[Close]

BLAST of Carg27569 vs. TrEMBL
Match: tr|A0A0A0LHA2|A0A0A0LHA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059740 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 0


Query: 6   HWDVKNKVISRTSSIGCSSRSIYYCGT-PEGVPFKWETQPGTPKDPPPQDMLPPLTPPPA 65
           HWD+KNKVISRTSSIG SS SIYY GT  +GVPFKWETQPGTPKDPPPQD+LPPL+PPPA
Sbjct: 7   HWDMKNKVISRTSSIGYSSHSIYYSGTADQGVPFKWETQPGTPKDPPPQDLLPPLSPPPA 66

Query: 66  VLSLGLPKPCIEQPKTRPRPLIRLRFWR---RSKKNGKRDARARTIDYSNE 113
           VLSLG+PKP I+QPK+RP P +RLRFW+   +S+  GK  A+  TID+ N+
Sbjct: 67  VLSLGVPKPYIDQPKSRPLPRMRLRFWKKIMKSRDGGKAAAQTTTIDHYND 117

[Close]

BLAST of Carg27569 vs. TrEMBL
Match: tr|A0A2I4FHG1|A0A2I4FHG1_9ROSI (uncharacterized protein LOC108998834 OS=Juglans regia OX=51240 GN=LOC108998834 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-27
Identity = 84/178 (47.19%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 8   DVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLTPPPAVLS 67
           +  +K++S  SS+G SSR IYY  + EGVPFKWE QPGTPKDPP  + +PPL+PPPAVLS
Sbjct: 21  EFNHKILSGNSSVGYSSR-IYYHRSNEGVPFKWEMQPGTPKDPPNDEGIPPLSPPPAVLS 80

Query: 68  LGLPKPCIEQPKTRPRPLIRLRFWRRSKKNGKRDARARTIDYSNEDRFGHPDKLETFSFL 127
           LGLPKPCI+    + +   R+RFW +SKKN +R    +     + D     DK E F F 
Sbjct: 81  LGLPKPCIKVQPNKAKTWPRIRFWNKSKKNKQRSEDVKAGPRRSHDHTTGSDKFERFEFC 140

Query: 128 SSDCEFMTSSR--NSMXXXXXXXXXXXXXXXSFFESL---TVRRRLNCNAWQINRILA 181
           SSD EFMTS R  +S XXXX           S  +S    + R  L+C+ W I+ IL+
Sbjct: 141 SSDREFMTSPRISSSSXXXXLSFSNGPSLQSSRLQSPGRDSFRVPLSCSPWNISTILS 197

[Close]

BLAST of Carg27569 vs. TrEMBL
Match: tr|A0A2P6QTB2|A0A2P6QTB2_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0402361 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.1e-26
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLTPPPAVLSLGL 70
           N+ +SR SS+GCSSR IYYC T EGVPF WE QPGTP++PP ++ + PLTPPPAV+SLGL
Sbjct: 7   NRSLSRNSSVGCSSR-IYYCRTNEGVPFNWEMQPGTPRNPPKEEAIAPLTPPPAVISLGL 66

Query: 71  PKPCIEQPKTRPRPLIRLRFWRRSKKNGKRDARARTIDYSNEDRFGHPDKLETFSFLSSD 130
           PKPCI+   ++P    RL FWR+SKKN K      T+  +N  R    DK + F F SSD
Sbjct: 67  PKPCIDVRHSKPPTRPRLGFWRKSKKN-KESKNVTTV--NNVAR--GSDKFDMFDFCSSD 126

Query: 131 CEFMTSS 138
            EFM S+
Sbjct: 127 SEFMAST 127

[Close]

BLAST of Carg27569 vs. TrEMBL
Match: tr|A0A2P5DRN1|A0A2P5DRN1_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_038800 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.3e-26
Identity = 87/188 (46.28%), Postives = 113/188 (60.11%), Query Frame = 0


Query: 5   FHWDVKN-KVISRTSSIGCSSRSIYY--CGTPEGVPFKWETQPGTPKDPPPQDMLPPLTP 64
           F ++VKN  ++SR SS+G SSR  YY   GT  G+PF+WE QPGTPKDPP ++ LPPL+P
Sbjct: 12  FSFNVKNDNILSRNSSVGYSSRIYYYRTAGT-GGIPFQWEMQPGTPKDPPKEEALPPLSP 71

Query: 65  PPAVLSLGLPKPC-IEQPKTRPRPLIRLRFWRRSKKNGKR-DARARTIDYSNEDRFGHPD 124
           PPAV SLGLPKPC I+Q   +PR  + +RFW+RSK+N  +  A  R  D S++ + G  D
Sbjct: 72  PPAVTSLGLPKPCVIDQEPCKPRRRL-IRFWKRSKRNDHQLRAYNRKSDQSDDVQNGVSD 131

Query: 125 -KLETFSFLSSDCEFMTS---SRNSMXXXXXXXXXXXXXXXSFFESLT----VRRRLNCN 180
            K E F F SSDCEFM S   + +S                S F+S       R  L+C+
Sbjct: 132 YKDEKFEFCSSDCEFMASPARNSSSSSSPSLSFSNGFSSQSSRFQSPAWHPRSRSTLSCS 191

[Close]

BLAST of Carg27569 vs. TrEMBL
Match: tr|M5XJH2|M5XJH2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019983mg PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.6e-25
Identity = 72/136 (52.94%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 11  NKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLTPPPAVLSLGL 70
           N+ +SR  S+GCSSR IYYC + EGVPF WE QPGTP++PP ++ +PP++PPPA LSLGL
Sbjct: 19  NRNLSRNPSVGCSSR-IYYCRSSEGVPFNWEMQPGTPRNPPKEEAIPPISPPPAALSLGL 78

Query: 71  PKPCI-EQPKTRP--RPLIRLRFWRRSKKNGKRDARAR-TIDYSNEDRFGHPDKLETFSF 130
           PKP + +QP  RP   PL RL+FWR+SKKN +R       ++Y      G  DK +   F
Sbjct: 79  PKPYMDQQPNKRPPTSPLPRLKFWRKSKKNKQRKNNVHDNVNYV----VGGSDKFDKVEF 138

Query: 131 LSSDCEFM--TSSRNS 141
            SSD EFM  TS +NS
Sbjct: 139 CSSDSEFMASTSPQNS 149

The following BLAST results are available for this feature:

BLAST of Carg27569 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938321.1	1.3e-87	92.78	putative protein TPRXL [Cucurbita moschata]	[more]
XP_022929606.1	5.7e-56	69.59	uncharacterized protein LOC111436141 [Cucurbita moschata]	[more]
XP_023546389.1	2.2e-55	68.56	uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo]	[more]
XP_022997465.1	2.8e-55	71.13	uncharacterized protein LOC111492375 [Cucurbita maxima]	[more]
XP_022153305.1	2.4e-54	68.98	uncharacterized protein LOC111020830 [Momordica charantia]	[more]

BLAST of Carg27569 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25845.1	8.6e-14	53.66	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT5G01790.1	4.3e-05	38.20	unknown protein	[more]

BLAST of Carg27569 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg27569 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHA2\|A0A0A0LHA2_CUCSA	2.8e-35	71.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G059740 PE=4 SV=1	[more]
tr\|A0A2I4FHG1\|A0A2I4FHG1_9ROSI	1.7e-27	47.19	uncharacterized protein LOC108998834 OS=Juglans regia OX=51240 GN=LOC108998834 P...	[more]
tr\|A0A2P6QTB2\|A0A2P6QTB2_ROSCH	3.1e-26	55.91	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0402361 PE=4...	[more]
tr\|A0A2P5DRN1\|A0A2P5DRN1_PARAD	5.3e-26	46.28	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_038800 PE...	[more]
tr\|M5XJH2\|M5XJH2_PRUPE	2.6e-25	52.94	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019983mg PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27569-RA	Carg27569-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33257	FAMILY NOT NAMED	coord: 11..162
None	No IPR available	PANTHER	PTHR33257:SF6	SUBFAMILY NOT NAMED	coord: 11..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27569	Cla022818	Watermelon (97103) v1	carwmB0214
Carg27569	Csa2G059740	Cucumber (Chinese Long) v2	carcuB0252
Carg27569	MELO3C004021	Melon (DHL92) v3.5.1	carmeB0230
Carg27569	ClCG11G012130	Watermelon (Charleston Gray)	carwcgB0219
Carg27569	CSPI02G06050	Wild cucumber (PI 183967)	carcpiB0257
Carg27569	Cucsa.089310	Cucumber (Gy14) v1	carcgyB0267
Carg27569	CmoCh12G008920	Cucurbita moschata (Rifu)	carcmoB0318
Carg27569	Lsi11G007600	Bottle gourd (USVL1VR-Ls)	carlsiB202
Carg27569	Cp4.1LG07g07350	Cucurbita pepo (Zucchini)	carcpeB0321
Carg27569	CsGy2G006170	Cucumber (Gy14) v2	carcgybB0241
Carg27569	MELO3C004021.2	Melon (DHL92) v3.6.1	carmedB0237
Carg27569	CsaV3_2G008430	Cucumber (Chinese Long) v3	carcucB0256
Carg27569	Cla97C11G218030	Watermelon (97103) v2	carwmbB0228
Carg27569	Bhi06G001116	Wax gourd	carwgoB0278

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None