Csa1G366960 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G366960
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	At2g17240/T23A1.10
Location	Chr1 : 14244384 .. 14247311 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGATGCAATTTTATTTTAGCGGAATTACATTAAGAAGTGGGTGTGAGAATTCGATAATTTCATAAATTGAAAGGATAATTTGGCGGAGGAAACAGTGACGTTGTGGTGTGGAGAGGAAAATAAGAGGCGGTCCGGTGTCCAACAACTCTTGTGGCGGCTATTTGATTTTGGTGGAATCGGCCACCCGGAGATTCAGTAACACTCCAGCCGTCACCTCAGGAAACGGGAAGTTCATGGCGTCGATATCCTTTTTAACCTCTAAAACCCTAGTCTTACCATCGGTGACCTACCTACCACTATCTTCTTCTTCGTCTTCATCTACAACGCATAGTTGCTGTCTTGGTGGCTGCATATGCTCCTTCCCAATCAAGCCGATTTCTACTTCTAATTTGATTTTTGGTAGAAGGAGAACGGGGAGGCAGGTGGTCCGAATGGCCCCGGATGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAGTTGTATCTTTCTCACTCCTTTCCTCCTTTTTCTTTTTTCCTGCAGCATTTTATGTTTTTTGTCTTGCAATGGAGTTTTTTTTTATGAGATTTGGTGCTTTTGCTTCCCGTTTTTAATTACTTTTGCTACTGCACCCCTAGATTGCTTGGGGGTGGATAATTGAAGCATTTCTAGGAATTGTTATAGTTAGTGATAAATTTTTATCTATGAAGGTTTTAGAAGGCTTATTCGGGAGTTATCTTGCCACGTTTTTCCTGCAAATTATATCTGCCTGCTTGTTTCGGCTATGTCTGGATTTTAGTTGTTAAACTTAGATTGGTAGAAGTTATTGGCAGTCCTCAAGGCATTTTATTGAAGATCTCACGTTGGGAAAAAAAACAAGGGACCTCAAATCTCATTAAGTAGATGGGTTACTCGAATCTTTGTTATCTAATACAATATTTGTCCATGAAGTTCAAACGGGCATTTGGTCCAAAATAAAAAATTGGGATCTGACCCAAGAATGGCGAACCCAAGGAAACACTATCTTGAGGGGCATATTGAGGATCTTACATAGAAAAAATCTGAGGGACTTCACAACTTCAATAAGACAAATGACTTATCTTATTGTCAATTGGTTTTGAGGTAAAACTTTATGTTATCTAATGCGTTTGTGTGGCAGTTCATAGGGCTGGTGCAGTCTCTTTGAGGCATTTGATGCAACTTTGTCAGTTTGCAAGGTGGTCGGGAATCAATTGAGAGAAGTTGCTCTGTCATCCTCCTTTTCAAGAGAAAGAACCATTGTATGTGACAAGCTGCAGATGTGCCATTTGGTGGCATCTTTGGTCCAGAGAAATAGTAGAAGTTTCAGGGAGAGGAGAATTTTCACAGGGACGTTTGAGACCTTGTTAGATTCTATGACCTTGGTGTCCATATCTTTTTCTAATTACCCATTGAGTTACACTTTACTTGATTGGAGCCCCCTCATTTTTGTACGCTCCTCCTTTTTTGATGCTAGTACATTTTTTCACTTTTTTTTCTCAAATAAAAGGATACGCCAGATGTCATGAATGTTTGTGTTAGGACTCTTCCCCCTGCACACAGAAAATCCCAATAACAATATAGAAACAGAGATGGTACTTTGGATATTTATATATCACTATCAACCAGAAAGTGATCGCAATGATAATCCAGAACAAAAGAAAACAATAACAACAAGATAAGAAAATGATAGTAAAGGACTCCTGGCAATTTGAGAAGCTGGCTCTCTCCCTAAAAGCTCTCAGCAGCTTTTCCCAAAAATATAACCTACCTCATCAATCCCTAAAAACATTCCTTAAGTACCTCCATTCCCTTGGTAGGACCTCTCCAAGATATTCCTTTCATTTATTTATATGGGCCGAGCTGTCTTCTTGAACATTCTCTTTTTTACCCTTCCGTTTGTAGGTATGTATGATAGGAGGTCTAACAGTTTGTTGGGTAATTTAATAGTTTATCTTGGTATCTGCCCTTTTCAGTTTTGGTTGTGTCGATATAATGGTTCCATGGACTTAATTTGATGCTTGATGTCTGTTTGTTCATTTTAGTTTCCTGTTCTGTGGCTGGGGTTCTACTTAATGATTTTGGAAAATAAACATGATATCATTATGTTGTTCATAAATTTGTCATGAATATTAGTAAGCACGCATCTTTTGCGCTTCATTTTGTAGTATGAAACTTTAGATGTTCTTACCTGAAAACTAAGTTTATTTAGTAACTAGTAAGAAAATTCTATGAAGTGCTAGAGTAGGCTGTTACTGGTGTTCTTTTACATTTAATGCTTCTTAACTCTTTGGTTGCAGGAGTGGGAGAGGCCTAGGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCACTGCCACCACCATTGCCATGTGATCCCCCCCTTGAAGAAGACGAGGAGGAGGAGGAGAAGGAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGGGGAGGAATAGATGCTGTCCTTGAAGAACTACTTGAGTTCCTTTCCCTTTTTCCATCTTCACTTTGTTTTTTGATAGGCTGAAAGCGTTAGATATCCCTAGGGGATGATGAGCTGAGTTAGTTTACAATGAACCAAATATGTTTGAGAGCTACAACTTATATTGCAATTCTATATTAAAGTAAATCTCTTAGGATTTCTTATTTTCTCGAGTTCCCCTGCTATAGGCAATGTATTTTACGAATAATTATCATGAATGATATGCCTTCTCTCCCGTTTGTACTCTCTTATATTTGAGTGTAGTTTCAGAGCAAATCTTTAGAAGCTGACGCAGGGTAGCACAAGGGGTTTCGCATTACTATATTGACACAAATCCCATAAACTGTTTGTTCTAATTGGTCTCTGTTGTTATCATTATTTTTTTTTATGCAATTCCTTGTTGTTTTC

mRNA sequence

ATGGCGTCGATATCCTTTTTAACCTCTAAAACCCTAGTCTTACCATCGGTGACCTACCTACCACTATCTTCTTCTTCGTCTTCATCTACAACGCATAGTTGCTGTCTTGGTGGCTGCATATGCTCCTTCCCAATCAAGCCGATTTCTACTTCTAATTTGATTTTTGGTAGAAGGAGAACGGGGAGGCAGGTGGTCCGAATGGCCCCGGATGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAGTTGAGTGGGAGAGGCCTAGGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCACTGCCACCACCATTGCCATGTGATCCCCCCCTTGAAGAAGACGAGGAGGAGGAGGAGAAGGAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGGGGAGGAATAG

Coding sequence (CDS)

ATGGCGTCGATATCCTTTTTAACCTCTAAAACCCTAGTCTTACCATCGGTGACCTACCTACCACTATCTTCTTCTTCGTCTTCATCTACAACGCATAGTTGCTGTCTTGGTGGCTGCATATGCTCCTTCCCAATCAAGCCGATTTCTACTTCTAATTTGATTTTTGGTAGAAGGAGAACGGGGAGGCAGGTGGTCCGAATGGCCCCGGATGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAGTTGAGTGGGAGAGGCCTAGGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCACTGCCACCACCATTGCCATGTGATCCCCCCCTTGAAGAAGACGAGGAGGAGGAGGAGAAGGAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGGGGAGGAATAG

Protein sequence

MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRTGRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEEDEEEEEKEEEEEENPDKENPDEPGEE*

Homology

[Close]

BLAST of Csa1G366960 vs. TrEMBL
Match: A0A0A0LWI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G366960 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.3e-81
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


Query: 1   MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT 60
           MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT
Sbjct: 1   MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT 60

Query: 61  GRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEE 120
           GRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEE
Sbjct: 61  GRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEE 120

Query: 121 DEEEEEKEEEEEENPDKENPDEPGEE 147
           DEEEEEKEEEEEENPDKENPDEPGEE
Sbjct: 121 DEEEEEKEEEEEENPDKENPDEPGEE 146

[Close]

BLAST of Csa1G366960 vs. TrEMBL
Match: V4WD53_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009718mg PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-39
Identity = 91/151 (60.26%), Postives = 109/151 (72.19%), Query Frame = 1


Query: 8   TSKTLVLPSVTYLPLSSSSSSSTTHSC-CLGGCICSFPIKPISTSNLI--------FG-- 67
           TSKTL   +  +    +SSS+ST+HSC C    + +F    +  +N I        FG  
Sbjct: 11  TSKTLAF-APPHAAKMTSSSASTSHSCSCSMESVPNFSSNRLIPNNRIAQTLVVPQFGFT 70

Query: 68  -----RRRTGRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPP 127
                 +R  RQVVRMAP+EEKLTRR+PLDFP+EWE+P+P RRPDIFPQFSPMKTPLPPP
Sbjct: 71  RVIRYNQRAKRQVVRMAPEEEKLTRRSPLDFPIEWEKPKPARRPDIFPQFSPMKTPLPPP 130

Query: 128 LPCDPPLEEDEEEEEKEEEEEENPDKENPDE 143
           LPCDPP EEDEEEEEK+EEEEENPDKE+PD+
Sbjct: 131 LPCDPP-EEDEEEEEKKEEEEENPDKEDPDK 159

[Close]

BLAST of Csa1G366960 vs. TrEMBL
Match: A0A067EAG5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030986mg PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-39
Identity = 92/156 (58.97%), Postives = 108/156 (69.23%), Query Frame = 1


Query: 8   TSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLI------------- 67
           TSKTL   +  +    +SSS+ST+HSC      CS    P  +SN +             
Sbjct: 11  TSKTLAF-APPHAAKMTSSSASTSHSCS-----CSMESVPNFSSNRLIPNNRMAQTLVVP 70

Query: 68  -FG-------RRRTGRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKT 127
            FG        +R  RQVVRMAP+EEKLTRR+PLDFP+EWE+P+P RRPDIFPQFSPMKT
Sbjct: 71  QFGFTRVIRYNQRAKRQVVRMAPEEEKLTRRSPLDFPIEWEKPKPARRPDIFPQFSPMKT 130

Query: 128 PLPPPLPCDPPLEEDEEEEEKEEEEEENPDKENPDE 143
           PLPPPLPCDPP EEDEEEEEK+EEEEENPDKE+PD+
Sbjct: 131 PLPPPLPCDPP-EEDEEEEEKKEEEEENPDKEDPDK 159

[Close]

BLAST of Csa1G366960 vs. TrEMBL
Match: A0A078GCW3_BRANA (BnaA07g02500D protein OS=Brassica napus GN=BnaA07g02500D PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.1e-39
Identity = 88/148 (59.46%), Postives = 106/148 (71.62%), Query Frame = 1


Query: 1   MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT 60
           + S SFL S +LV+ S T +  SSSSS S     C       F   P S+ +L   RR  
Sbjct: 4   LPSASFLPSPSLVVLSPTKIFSSSSSSRSIV---CSSSRAHGFSSIPRSSPSLRMARRAN 63

Query: 61  GR--QVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPL 120
               QVV MAP+EEKLTRRNPLDFP+EWERP+PGRRPDIFP+FSPMKTPLPPP+P DPP 
Sbjct: 64  HNKLQVVAMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKTPLPPPMPYDPPA 123

Query: 121 EEDEEEEEKEEEEEENPDKENPDEPGEE 147
           E+DEEEEEK+EEEEENPD+E  ++P ++
Sbjct: 124 EDDEEEEEKKEEEEENPDQEEEEQPDKQ 148

[Close]

BLAST of Csa1G366960 vs. TrEMBL
Match: K9P2M9_9ROSI (Uncharacterized protein OS=Morella rubra PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.1e-39
Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 1


Query: 21  PLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGR---RRTGRQVVRMAPDEEKLTRR 80
           P  SSSSS+T+H+C L    CS    P+  S  +      R    QVVRMAP+EEKLTRR
Sbjct: 35  PPPSSSSSATSHTCRLVRPRCSMVSFPMFDSPRMVSSSSGRAKKLQVVRMAPEEEKLTRR 94

Query: 81  NPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEEDEEEEEKEEEEEENPDK 140
           NPLDFP+EWERP+PGRRPDIFPQFSPMKTPLPPPLP DPP EEDEEEEEK+EEEEE+P+K
Sbjct: 95  NPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPYDPP-EEDEEEEEKKEEEEEDPEK 154

Query: 141 ENPDEPGEE 147
           E P++P ++
Sbjct: 155 EEPEQPEKQ 162

[Close]

BLAST of Csa1G366960 vs. TAIR10
Match: AT2G17240.1 (AT2G17240.1 unknown protein)

HSP 1 Score: 158.3 bits (399), Expect = 3.6e-39
Identity = 80/142 (56.34%), Postives = 98/142 (69.01%), Query Frame = 1


Query: 5   SFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRTGRQV 64
           S  +++ L  PS+  L   +  SS +    C    + +F     S+S     R R   QV
Sbjct: 3   SLCSARFLPSPSLDILSTKTKISSDSRSLGCSSSRVFAFSSVHRSSSR----RNRNQLQV 62

Query: 65  VRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEEDEEE 124
           V MAP+EEKLTRRNPLDFP+EWERP+PGRRPDIFP+FSPMKTPLPPP+P DPP EEDEEE
Sbjct: 63  VSMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKTPLPPPMPYDPP-EEDEEE 122

Query: 125 EEKEEEEEENPDKENPDEPGEE 147
           EEK+EEEEENPD+E  ++P ++
Sbjct: 123 EEKKEEEEENPDQEEEEQPEKQ 139

[Close]

BLAST of Csa1G366960 vs. TAIR10
Match: AT3G24506.1 (AT3G24506.1 unknown protein)

HSP 1 Score: 150.6 bits (379), Expect = 7.6e-37
Identity = 78/130 (60.00%), Postives = 92/130 (70.77%), Query Frame = 1


Query: 21  PLSSSS------SSSTTHSCCLGGCICSFPIKPISTSNLIFGRR-RTGRQVVRMAPDEEK 80
           PLSSSS      S  +  S    G  CSF    I+       R+ R   QVV MAP+EEK
Sbjct: 20  PLSSSSLNRAAPSIFSPFSRINHGFSCSF----IAVQRFALSRKTRKQLQVVAMAPEEEK 79

Query: 81  LTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEEDEEEEEKEEEEEE 140
           LTRRNPLDFP+EWERP+PGRRPDIFP+FSPMK+PLPPP+P DPP EE+EEEE+KEEE E+
Sbjct: 80  LTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKSPLPPPMPYDPPEEEEEEEEKKEEETED 139

Query: 141 NPDKENPDEP 144
           +P+KE+ D+P
Sbjct: 140 DPEKEDEDQP 145

[Close]

BLAST of Csa1G366960 vs. NCBI nr
Match: gi|449461977|ref|XP_004148718.1| (PREDICTED: actin-binding protein [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 1.0e-80
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


Query: 1   MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT 60
           MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT
Sbjct: 1   MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT 60

Query: 61  GRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEE 120
           GRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEE
Sbjct: 61  GRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEE 120

Query: 121 DEEEEEKEEEEEENPDKENPDEPGEE 147
           DEEEEEKEEEEEENPDKENPDEPGEE
Sbjct: 121 DEEEEEKEEEEEENPDKENPDEPGEE 146

[Close]

BLAST of Csa1G366960 vs. NCBI nr
Match: gi|659126822|ref|XP_008463385.1| (PREDICTED: uncharacterized protein LOC103501552 [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 9.5e-66
Identity = 124/146 (84.93%), Postives = 134/146 (91.78%), Query Frame = 1


Query: 1   MASISFLTSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLIFGRRRT 60
           MASIS  +SKTLV PS TYL +S  SSSST+HSCCLGGC CSFPIKP+STSNLIFGRRRT
Sbjct: 67  MASISLFSSKTLVSPSATYLRIS--SSSSTSHSCCLGGCRCSFPIKPLSTSNLIFGRRRT 126

Query: 61  GRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPLEE 120
           GRQVVRMAP+EEKLTRRNPLDFP+EWERPRPGRRPDIFPQFSPMKTPLP PLPCDPP EE
Sbjct: 127 GRQVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFPQFSPMKTPLPLPLPCDPP-EE 186

Query: 121 DEEEEEKEEEEEENPDKENPDEPGEE 147
           DEEEEEK+EEEEENPDKENP+ P ++
Sbjct: 187 DEEEEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of Csa1G366960 vs. NCBI nr
Match: gi|645244661|ref|XP_008228525.1| (PREDICTED: coiled-coil domain-containing protein 9-like [Prunus mume])

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41
Identity = 92/153 (60.13%), Postives = 110/153 (71.90%), Query Frame = 1


Query: 7   LTSKTLVLPSVTYLP-LSSSSSSSTTHSCCLGGCICSF---PIKP-------ISTSNLIF 66
           L S TL LP    +P L  SSSSS++ S     C+CSF     KP       +    + F
Sbjct: 3   LRSLTLPLPFPAVIPPLPPSSSSSSSSSSSSSSCLCSFRPYQYKPNPGCSIALRAKPISF 62

Query: 67  GRRRTGRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPPLPCD 126
             RR    VVRMAP+EEKLTRR+PLDFP+EWERP+PGRRPDIFPQFSPMKTPLPPPLP D
Sbjct: 63  LNRRRQSHVVRMAPEEEKLTRRSPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPAD 122

Query: 127 PPLEEDEEEEEKEEEE--EENPDKENPDEPGEE 147
           PP E++EEEE+KEEEE  EE+PDKENP++PG++
Sbjct: 123 PPEEDEEEEEKKEEEEEGEEDPDKENPEDPGQQ 155

[Close]

BLAST of Csa1G366960 vs. NCBI nr
Match: gi|567918296|ref|XP_006451154.1| (hypothetical protein CICLE_v10009718mg [Citrus clementina])

HSP 1 Score: 170.2 bits (430), Expect = 2.6e-39
Identity = 91/151 (60.26%), Postives = 109/151 (72.19%), Query Frame = 1


Query: 8   TSKTLVLPSVTYLPLSSSSSSSTTHSC-CLGGCICSFPIKPISTSNLI--------FG-- 67
           TSKTL   +  +    +SSS+ST+HSC C    + +F    +  +N I        FG  
Sbjct: 11  TSKTLAF-APPHAAKMTSSSASTSHSCSCSMESVPNFSSNRLIPNNRIAQTLVVPQFGFT 70

Query: 68  -----RRRTGRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKTPLPPP 127
                 +R  RQVVRMAP+EEKLTRR+PLDFP+EWE+P+P RRPDIFPQFSPMKTPLPPP
Sbjct: 71  RVIRYNQRAKRQVVRMAPEEEKLTRRSPLDFPIEWEKPKPARRPDIFPQFSPMKTPLPPP 130

Query: 128 LPCDPPLEEDEEEEEKEEEEEENPDKENPDE 143
           LPCDPP EEDEEEEEK+EEEEENPDKE+PD+
Sbjct: 131 LPCDPP-EEDEEEEEKKEEEEENPDKEDPDK 159

[Close]

BLAST of Csa1G366960 vs. NCBI nr
Match: gi|641831847|gb|KDO50895.1| (hypothetical protein CISIN_1g030986mg [Citrus sinensis])

HSP 1 Score: 169.9 bits (429), Expect = 3.4e-39
Identity = 92/156 (58.97%), Postives = 108/156 (69.23%), Query Frame = 1


Query: 8   TSKTLVLPSVTYLPLSSSSSSSTTHSCCLGGCICSFPIKPISTSNLI------------- 67
           TSKTL   +  +    +SSS+ST+HSC      CS    P  +SN +             
Sbjct: 11  TSKTLAF-APPHAAKMTSSSASTSHSCS-----CSMESVPNFSSNRLIPNNRMAQTLVVP 70

Query: 68  -FG-------RRRTGRQVVRMAPDEEKLTRRNPLDFPVEWERPRPGRRPDIFPQFSPMKT 127
            FG        +R  RQVVRMAP+EEKLTRR+PLDFP+EWE+P+P RRPDIFPQFSPMKT
Sbjct: 71  QFGFTRVIRYNQRAKRQVVRMAPEEEKLTRRSPLDFPIEWEKPKPARRPDIFPQFSPMKT 130

Query: 128 PLPPPLPCDPPLEEDEEEEEKEEEEEENPDKENPDE 143
           PLPPPLPCDPP EEDEEEEEK+EEEEENPDKE+PD+
Sbjct: 131 PLPPPLPCDPP-EEDEEEEEKKEEEEENPDKEDPDK 159

The following BLAST results are available for this feature:

BLAST of Csa1G366960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWI5_CUCSA	7.3e-81	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G366960 PE=4 SV=1	[more]
V4WD53_9ROSI	1.8e-39	60.26	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009718mg PE=4 SV=1	[more]
A0A067EAG5_CITSI	2.4e-39	58.97	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030986mg PE=4 SV=1	[more]
A0A078GCW3_BRANA	3.1e-39	59.46	BnaA07g02500D protein OS=Brassica napus GN=BnaA07g02500D PE=4 SV=1	[more]
K9P2M9_9ROSI	4.1e-39	65.89	Uncharacterized protein OS=Morella rubra PE=2 SV=1	[more]

BLAST of Csa1G366960 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17240.1	3.6e-39	56.34	unknown protein	[more]
AT3G24506.1	7.6e-37	60.00	unknown protein	[more]

BLAST of Csa1G366960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461977\|ref\|XP_004148718.1\|	1.0e-80	100.00	PREDICTED: actin-binding protein [Cucumis sativus]	[more]
gi\|659126822\|ref\|XP_008463385.1\|	9.5e-66	84.93	PREDICTED: uncharacterized protein LOC103501552 [Cucumis melo]	[more]
gi\|645244661\|ref\|XP_008228525.1\|	2.8e-41	60.13	PREDICTED: coiled-coil domain-containing protein 9-like [Prunus mume]	[more]
gi\|567918296\|ref\|XP_006451154.1\|	2.6e-39	60.26	hypothetical protein CICLE_v10009718mg [Citrus clementina]	[more]
gi\|641831847\|gb\|KDO50895.1\|	3.4e-39	58.97	hypothetical protein CISIN_1g030986mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0015031	protein transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU097151	cucumber EST collection version 3.0	transcribed_cluster
CU155297	cucumber EST collection version 3.0	transcribed_cluster
CU160383	cucumber EST collection version 3.0	transcribed_cluster
CU160679	cucumber EST collection version 3.0	transcribed_cluster
CU172587	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G366960.1	Csa1G366960.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU097151	CU097151	transcribed_cluster
CU160679	CU160679	transcribed_cluster
CU172587	CU172587	transcribed_cluster
CU160383	CU160383	transcribed_cluster
CU155297	CU155297	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35713	FAMILY NOT NAMED	coord: 53..145 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G366960	Cla010630	Watermelon (97103) v1	cuwmB098
Csa1G366960	MELO3C025336	Melon (DHL92) v3.5.1	cumeB003
Csa1G366960	Lsi06G008810	Bottle gourd (USVL1VR-Ls)	culsiB062
Csa1G366960	MELO3C025336.2	Melon (DHL92) v3.6.1	cumedB050
Csa1G366960	Cla97C06G118250	Watermelon (97103) v2	cuwmbB083
Csa1G366960	Bhi02G000936	Wax gourd	cuwgoB098
Csa1G366960	CSPI01G19210	Wild cucumber (PI 183967)	cpicuB001
Csa1G366960	Cucsa.235530	Cucumber (Gy14) v1	cgycuB333
Csa1G366960	CmaCh11G006040	Cucurbita maxima (Rimu)	cmacuB103
Csa1G366960	CmaCh10G006100	Cucurbita maxima (Rimu)	cmacuB063
Csa1G366960	CmoCh10G006500	Cucurbita moschata (Rifu)	cmocuB053
Csa1G366960	CmoCh11G006090	Cucurbita moschata (Rifu)	cmocuB090
Csa1G366960	Cp4.1LG04g09980	Cucurbita pepo (Zucchini)	cpecuB640
Csa1G366960	Cp4.1LG18g04370	Cucurbita pepo (Zucchini)	cpecuB355
Csa1G366960	CsGy1G019140	Cucumber (Gy14) v2	cgybcuB002
Csa1G366960	Carg12191	Silver-seed gourd	carcuB0039
Csa1G366960	Carg09859	Silver-seed gourd	carcuB0134

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G366960	Silver-seed gourd	carcuB0596
Csa1G366960	Wax gourd	cuwgoB004
Csa1G366960	Cucumber (Gy14) v1	cgycuB149
Csa1G366960	Cucurbita maxima (Rimu)	cmacuB783