Carg09859 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTGGCGGCTATTTGATTTCGGTGGAATCGGCCACCAGGAGATTCAGTTAGACCCTACCCGTTACCTCTGGGGAAGAGGAAGATCATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTATCTACCAATGTCCTCTTCATCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAGGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGTATCTTTCTCACCCTTTCCTTGCGTGTTTGATGTTTTCGGTTTGTAATGGAGCTCTTTTTCGTAGGATTTTAATGTTTTTGCTTCCCGTTCATGGAGATTATGCTTACCCTTTTTATGTAGCTTAGCTAGTATATTTGCTAGATTAAGTTGGGTGGATAATTGGAGCGTTTCCTAGGATTTGATATAATTATTGTTAAATTTTGTCTCTGAAGGTTGTTTAAAATGCTTGTTCATGAGTTATCTTGCCAGGTTCTTCCTGCAACTGTACCTGTCTGCTTGTTTTGGCTATGTCTGCATTTTCCATGGAAAGTATCCATCCCTTGAGCTCAATTGAAAATGGGCGATTTCTATCTTTGGACGAGGGGCACCAACCATTATAATGTTTACTTATTTGCATTGTCACAGATTTCATGAGAATGGGCCATAATTTGTTGCCTGGATATTTTGACTTCATATTTGTGATAGTTCTTGTAGATTGTATTGCACTGGGTAAATGCTTATTGCACTGTAGTTGTTGAACTGAGATTGAAAGAAGATATTGGCAGTCCTCACGATTGTTTGTCGCGCAATTTAATAGTTATATTTATACTTCACCATTTCAGTTTTGGGGGTGTTTTGTTTGTTCAATTTGTTTTCTGTTCTTCTGCCGGGTTTCTACTTGATGATTTTGGAAAATCAACTGACATCATCAGGTTGTTCATAAATTTATCTTGAATCATTTTTGTAAGGGCGCATTTTTTGGTGGTCAATTCGTTTTCTAATTTGAAATTGCTGATGTTCTTACCTGACAAACGAAGTTTGGTTAGTAACTAGTTAGAAAAGTCTATGAAGTGCTTGAGTAGGCTATAGCTGGTGTTCTTTACATTGAATGCTTCTTGACTATTTGGTTGCAGGAGTGGGAGAGGCCAAAGCCAGGGCGTAGGCCAGACATTTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCGTGTGATCCCCCTGAAGAGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAGTAGATGATTTTGAAGAACTCCTTGAGTTTTTTGCCCCTTTTCCATCTTCACTTTGTTTTTTGATAGGCTGAAAGCAATAGATATCCCCAGGGGACGATGAGCTGAGATAGTCAACTATGAACCAAACATGTTTGACTGCTACTACTGATATTGCAATTCTATATTAAATTAAAAATCTTTTTAGGATTTCCCATTCTCTGGAGTTTCAACCCCTACTTTAGGCAGTTCATTTTACGAATAATTATCATGAATGATATGCCTTCTCACCCGTTTCCTGTC TTGTGGCGGCTATTTGATTTCGGTGGAATCGGCCACCAGGAGATTCAGTTAGACCCTACCCGTTACCTCTGGGGAAGAGGAAGATCATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTATCTACCAATGTCCTCTTCATCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAGGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGAGTGGGAGAGGCCAAAGCCAGGGCGTAGGCCAGACATTTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCGTGTGATCCCCCTGAAGAGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAGTAGATGATTTTGAAGAACTCCTTGAGTTTTTTGCCCCTTTTCCATCTTCACTTTGTTTTTTGATAGGCTGAAAGCAATAGATATCCCCAGGGGACGATGAGCTGAGATAGTCAACTATGAACCAAACATGTTTGACTGCTACTACTGATATTGCAATTCTATATTAAATTAAAAATCTTTTTAGGATTTCCCATTCTCTGGAGTTTCAACCCCTACTTTAGGCAGTTCATTTTACGAATAATTATCATGAATGATATGCCTTCTCACCCGTTTCCTGTC ATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTATCTACCAATGTCCTCTTCATCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAGGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGAGTGGGAGAGGCCAAAGCCAGGGCGTAGGCCAGACATTTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCGTGTGATCCCCCTGAAGAGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAGTAG MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRGRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
BLAST of Carg09859 vs. NCBI nr
Match: XP_022960823.1 (uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata]) HSP 1 Score: 177.9 bits (450), Expect = 2.4e-41 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of Carg09859 vs. NCBI nr
Match: XP_023516602.1 (uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516603.1 uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516604.1 uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40 Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of Carg09859 vs. NCBI nr
Match: XP_022987895.1 (uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima]) HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38 Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Carg09859 vs. NCBI nr
Match: XP_022960824.1 (uncharacterized protein LOC111461515 isoform X2 [Cucurbita moschata]) HSP 1 Score: 154.8 bits (390), Expect = 2.1e-34 Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of Carg09859 vs. NCBI nr
Match: XP_023516605.1 (uncharacterized protein LOC111780429 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33 Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of Carg09859 vs. TAIR10
Match: AT2G17240.1 (unknown protein) HSP 1 Score: 69.7 bits (169), Expect = 1.6e-12 Identity = 50/94 (53.19%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Carg09859 vs. TAIR10
Match: AT3G24506.1 (unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 4.5e-10 Identity = 40/77 (51.95%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of Carg09859 vs. TrEMBL
Match: tr|A0A1S3CKP8|A0A1S3CKP8_CUCME (uncharacterized protein LOC103501552 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501552 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.1e-32 Identity = 75/91 (82.42%), Postives = 79/91 (86.81%), Query Frame = 0
BLAST of Carg09859 vs. TrEMBL
Match: tr|A0A1S4E470|A0A1S4E470_CUCME (uncharacterized protein LOC103501552 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501552 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.2e-26 Identity = 68/85 (80.00%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of Carg09859 vs. TrEMBL
Match: tr|A0A0A0LWI5|A0A0A0LWI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G366960 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 7.3e-23 Identity = 63/93 (67.74%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of Carg09859 vs. TrEMBL
Match: tr|A0A2P4GWX7|A0A2P4GWX7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_61078 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.2e-11 Identity = 53/101 (52.48%), Postives = 59/101 (58.42%), Query Frame = 0
BLAST of Carg09859 vs. TrEMBL
Match: tr|A0A2I4G4L0|A0A2I4G4L0_9ROSI (coiled-coil domain-containing protein 9-like OS=Juglans regia OX=51240 GN=LOC109004661 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.9e-11 Identity = 52/104 (50.00%), Postives = 65/104 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |