Csa1G171070 (gene) Cucumber (Chinese Long) v2

NameCsa1G171070
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
LocationChr1 : 10644326 .. 10646362 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATGTTCCCACATTGCTATTTTAATAGATGTATTGGAAAATATGGGCGGCCGTTAGCGCTTTCTCCTTCTAAACTCAAAACATTAAGCTGTTTCCTCTTTGCTGCAAAGTATGGCACTCCTTGTGCCTTCGTGGAGTCAAATACGGCGGAAAGCCAAGATTGGGACCCCTGCACTGCCCCTTTCACTGGTGTCCTTCAAGATGAAGACCTTCTTCGAACGACCCACATTTCTTCTTCTGGTACTTCCTCTAATTCTACTGGGCTCTATGTTCTGGACCTCATCAACTGTGGTTCTTTAGAACCTGAACGAACACTTTACAGTAAAATGCTAAACAAATGCACATACTTGCGCAAACTTAAGCAGGGCAGAGCCATTCATGCCCACATCCAGAGTTCTACGTTTGAGGATGATCTGGTACTTCTCAATTTTATCTTAAACATGTATGCGAAATGTGGCAGTCTTGAGGAGGCACAGGACCTGTTTGATAAAATGCCTACAAAAGACATGGTTAGTTGGACTGTGCTGATCAGTGGCTATTCTCAGAGCGGGCAAGCATCTGAAGCTCTTGCTTTGTTCCCTAAGATGCTCCACCTGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCCTGTTGAAGGCTTCTGGTACTGGCCCTAGTGACCACCATGGCAGGCAACTTCATGCATTCTCCCTCAAATATGGCTATGATATGAATGTTCATGTTGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGCGCATATGCGAGAAGCCAAAGTGATTTTTAACAGCCTGGCTGCAAAAAATGTGGTGTCTTGGAATGCTCTAATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAGGTTGTTTTTGCAGATGCTAAGACAGGGTTTTGAACCTACACATTTTACATACTCTAGTGTTTTTACTGCCTGTGCGAGCTCTGGATCTTTGGAGCAAGGCAAATGGGTTCATGCCCATGTAATAAAATCTGGTGGACAGCCCATTGCTTATATTGGAAACACTCTCATTGACATGTATGCTAAATCAGGCAGCATCAAGGATGCAAAGAAAGTCTTCCGGAGGTTGGTTAAACAGGATATTGTTTCGTGGAACTCGATTATATCGGGATATGCACAACATGGACTGGGAGCTGAAGCTTTACAACTATTTGAACAGATGTTGAAGGCCAAGGTTCAACCTAACGAAATTACTTTTCTCTCTGTTCTTACTGCTTGTAGCCATTCGGGGCTTTTGGATGAAGGGCAGTATTATTTTGAATTGATGAAGAAACACAAGATAGAAGCACAGGTTGCACATCATGTAACAGTTGTTGATCTTTTAGGTCGAGCAGGACGGCTTAACGAAGCCAACAAGTTCATAGAGGAAATGCCTATCAAACCTACTGCAGCTGTCTGGGGAGCCTTGCTTGGTTCTTGCAGGATGCATAAGAATATGGATTTGGGTGTTTATGCTGCCGAACAGATTTTCGAGCTTGACCCCCATGACTCAGGTCCTCATGTACTGTTGTCTAATATTTATGCTTCTGCTGGTAGATTGAGTGATGCAGCAAAGGTAAGGAAGATGATGAAAGAGAGTGGGGTAAAGAAAGAACCTGCCTGTAGTTGGGTTGAAATTGAGAATGAAGTCCATGTGTTTGTGGCAAATGATGATTCACATCCAATGAGAGAAGAAATACAGAGGATGTGGGAGAAAATAAGTGGGAAAATTAAAGAGATTGGGTATGTGCCAGACACAAGCCATGTGCTTTTCTTCATGAACCAGCAGGACAGAGAATTAAAGCTACAGTACCATAGTGAGAAGTTAGCATTAGCATTTGCAGTCTTGAAAACTCCTCCTGGATTAACCATTAGGATTAAGAAGAACATTAGAATTTGTGGTGATTGCCACTCTGCATTCAAGTTTGCTTCTAGAGTCTTAGGAAGAGAAATCATCGTAAGAGACACCAACAGATTTCACCATTTCCTTCATGGCATGTGTTCTTGCAGGGACTATTGGTAG

mRNA sequence

ATGGTTATGTTCCCACATTGCTATTTTAATAGATGTATTGGAAAATATGGGCGGCCGTTAGCGCTTTCTCCTTCTAAACTCAAAACATTAAGCTGTTTCCTCTTTGCTGCAAAGTATGGCACTCCTTGTGCCTTCGTGGAGTCAAATACGGCGGAAAGCCAAGATTGGGACCCCTGCACTGCCCCTTTCACTGGTGTCCTTCAAGATGAAGACCTTCTTCGAACGACCCACATTTCTTCTTCTGGTACTTCCTCTAATTCTACTGGGCTCTATGTTCTGGACCTCATCAACTGTGGTTCTTTAGAACCTGAACGAACACTTTACAGTAAAATGCTAAACAAATGCACATACTTGCGCAAACTTAAGCAGGGCAGAGCCATTCATGCCCACATCCAGAGTTCTACGTTTGAGGATGATCTGGTACTTCTCAATTTTATCTTAAACATGTATGCGAAATGTGGCAGTCTTGAGGAGGCACAGGACCTGTTTGATAAAATGCCTACAAAAGACATGGTTAGTTGGACTGTGCTGATCAGTGGCTATTCTCAGAGCGGGCAAGCATCTGAAGCTCTTGCTTTGTTCCCTAAGATGCTCCACCTGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCCTGTTGAAGGCTTCTGGTACTGGCCCTAGTGACCACCATGGCAGGCAACTTCATGCATTCTCCCTCAAATATGGCTATGATATGAATGTTCATGTTGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGCGCATATGCGAGAAGCCAAAGTGATTTTTAACAGCCTGGCTGCAAAAAATGTGGTGTCTTGGAATGCTCTAATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAGGTTGTTTTTGCAGATGCTAAGACAGGGTTTTGAACCTACACATTTTACATACTCTAGTGTTTTTACTGCCTGTGCGAGCTCTGGATCTTTGGAGCAAGGCAAATGGGTTCATGCCCATGTAATAAAATCTGGTGGACAGCCCATTGCTTATATTGGAAACACTCTCATTGACATGTATGCTAAATCAGGCAGCATCAAGGATGCAAAGAAAGTCTTCCGGAGGTTGGTTAAACAGGATATTGTTTCGTGGAACTCGATTATATCGGGATATGCACAACATGGACTGGGAGCTGAAGCTTTACAACTATTTGAACAGATGTTGAAGGCCAAGGTTCAACCTAACGAAATTACTTTTCTCTCTGTTCTTACTGCTTGTAGCCATTCGGGGCTTTTGGATGAAGGGCAGTATTATTTTGAATTGATGAAGAAACACAAGATAGAAGCACAGGTTGCACATCATGTAACAGTTGTTGATCTTTTAGGTCGAGCAGGACGGCTTAACGAAGCCAACAAGTTCATAGAGGAAATGCCTATCAAACCTACTGCAGCTGTCTGGGGAGCCTTGCTTGGTTCTTGCAGGATGCATAAGAATATGGATTTGGGTGTTTATGCTGCCGAACAGATTTTCGAGCTTGACCCCCATGACTCAGGTCCTCATGTACTGTTGTCTAATATTTATGCTTCTGCTGGTAGATTGAGTGATGCAGCAAAGGTAAGGAAGATGATGAAAGAGAGTGGGGTAAAGAAAGAACCTGCCTGTAGTTGGGTTGAAATTGAGAATGAAGTCCATGTGTTTGTGGCAAATGATGATTCACATCCAATGAGAGAAGAAATACAGAGGATGTGGGAGAAAATAAGTGGGAAAATTAAAGAGATTGGGTATGTGCCAGACACAAGCCATGTGCTTTTCTTCATGAACCAGCAGGACAGAGAATTAAAGCTACAGTACCATAGTGAGAAGTTAGCATTAGCATTTGCAGTCTTGAAAACTCCTCCTGGATTAACCATTAGGATTAAGAAGAACATTAGAATTTGTGGTGATTGCCACTCTGCATTCAAGTTTGCTTCTAGAGTCTTAGGAAGAGAAATCATCGTAAGAGACACCAACAGATTTCACCATTTCCTTCATGGCATGTGTTCTTGCAGGGACTATTGGTAG

Coding sequence (CDS)

ATGGTTATGTTCCCACATTGCTATTTTAATAGATGTATTGGAAAATATGGGCGGCCGTTAGCGCTTTCTCCTTCTAAACTCAAAACATTAAGCTGTTTCCTCTTTGCTGCAAAGTATGGCACTCCTTGTGCCTTCGTGGAGTCAAATACGGCGGAAAGCCAAGATTGGGACCCCTGCACTGCCCCTTTCACTGGTGTCCTTCAAGATGAAGACCTTCTTCGAACGACCCACATTTCTTCTTCTGGTACTTCCTCTAATTCTACTGGGCTCTATGTTCTGGACCTCATCAACTGTGGTTCTTTAGAACCTGAACGAACACTTTACAGTAAAATGCTAAACAAATGCACATACTTGCGCAAACTTAAGCAGGGCAGAGCCATTCATGCCCACATCCAGAGTTCTACGTTTGAGGATGATCTGGTACTTCTCAATTTTATCTTAAACATGTATGCGAAATGTGGCAGTCTTGAGGAGGCACAGGACCTGTTTGATAAAATGCCTACAAAAGACATGGTTAGTTGGACTGTGCTGATCAGTGGCTATTCTCAGAGCGGGCAAGCATCTGAAGCTCTTGCTTTGTTCCCTAAGATGCTCCACCTGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCCTGTTGAAGGCTTCTGGTACTGGCCCTAGTGACCACCATGGCAGGCAACTTCATGCATTCTCCCTCAAATATGGCTATGATATGAATGTTCATGTTGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGCGCATATGCGAGAAGCCAAAGTGATTTTTAACAGCCTGGCTGCAAAAAATGTGGTGTCTTGGAATGCTCTAATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAGGTTGTTTTTGCAGATGCTAAGACAGGGTTTTGAACCTACACATTTTACATACTCTAGTGTTTTTACTGCCTGTGCGAGCTCTGGATCTTTGGAGCAAGGCAAATGGGTTCATGCCCATGTAATAAAATCTGGTGGACAGCCCATTGCTTATATTGGAAACACTCTCATTGACATGTATGCTAAATCAGGCAGCATCAAGGATGCAAAGAAAGTCTTCCGGAGGTTGGTTAAACAGGATATTGTTTCGTGGAACTCGATTATATCGGGATATGCACAACATGGACTGGGAGCTGAAGCTTTACAACTATTTGAACAGATGTTGAAGGCCAAGGTTCAACCTAACGAAATTACTTTTCTCTCTGTTCTTACTGCTTGTAGCCATTCGGGGCTTTTGGATGAAGGGCAGTATTATTTTGAATTGATGAAGAAACACAAGATAGAAGCACAGGTTGCACATCATGTAACAGTTGTTGATCTTTTAGGTCGAGCAGGACGGCTTAACGAAGCCAACAAGTTCATAGAGGAAATGCCTATCAAACCTACTGCAGCTGTCTGGGGAGCCTTGCTTGGTTCTTGCAGGATGCATAAGAATATGGATTTGGGTGTTTATGCTGCCGAACAGATTTTCGAGCTTGACCCCCATGACTCAGGTCCTCATGTACTGTTGTCTAATATTTATGCTTCTGCTGGTAGATTGAGTGATGCAGCAAAGGTAAGGAAGATGATGAAAGAGAGTGGGGTAAAGAAAGAACCTGCCTGTAGTTGGGTTGAAATTGAGAATGAAGTCCATGTGTTTGTGGCAAATGATGATTCACATCCAATGAGAGAAGAAATACAGAGGATGTGGGAGAAAATAAGTGGGAAAATTAAAGAGATTGGGTATGTGCCAGACACAAGCCATGTGCTTTTCTTCATGAACCAGCAGGACAGAGAATTAAAGCTACAGTACCATAGTGAGAAGTTAGCATTAGCATTTGCAGTCTTGAAAACTCCTCCTGGATTAACCATTAGGATTAAGAAGAACATTAGAATTTGTGGTGATTGCCACTCTGCATTCAAGTTTGCTTCTAGAGTCTTAGGAAGAGAAATCATCGTAAGAGACACCAACAGATTTCACCATTTCCTTCATGGCATGTGTTCTTGCAGGGACTATTGGTAG

Protein sequence

MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW*
BLAST of Csa1G171070 vs. Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 7.6e-227
Identity = 381/619 (61.55%), Postives = 475/619 (76.74%), Query Frame = 1

Query: 61  APFTGVLQDEDLLRTTHISSSGTSSNST-GLYVLDLINCGSLEPERTLYSKMLNKCTYLR 120
           AP +   +DE L   ++     TSSN   G Y+           +R  Y+ +L KCT  +
Sbjct: 24  APVSEDSEDESLKFPSNDLLLRTSSNDLEGSYI---------PADRRFYNTLLKKCTVFK 83

Query: 121 KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 180
            L QGR +HAHI  S F  D+V+ N +LNMYAKCGSLEEA+ +F+KMP +D V+WT LIS
Sbjct: 84  LLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLIS 143

Query: 181 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 240
           GYSQ  +  +AL  F +ML  G+ PNEFTLSS++KA+        G QLH F +K G+D 
Sbjct: 144 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 203

Query: 241 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQML 300
           NVHVGS+LLD+Y R+  M +A+++F++L ++N VSWNALIAGHAR+   E  + LF  ML
Sbjct: 204 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 263

Query: 301 RQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 360
           R GF P+HF+Y+S+F AC+S+G LEQGKWVHA++IKSG + +A+ GNTL+DMYAKSGSI 
Sbjct: 264 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 323

Query: 361 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 420
           DA+K+F RL K+D+VSWNS+++ YAQHG G EA+  FE+M +  ++PNEI+FLSVLTACS
Sbjct: 324 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 383

Query: 421 HSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWG 480
           HSGLLDEG +Y+ELMKK  I  +  H+VTVVDLLGRAG LN A +FIEEMPI+PTAA+W 
Sbjct: 384 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 443

Query: 481 ALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 540
           ALL +CRMHKN +LG YAAE +FELDP D GPHV+L NIYAS GR +DAA+VRK MKESG
Sbjct: 444 ALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESG 503

Query: 541 VKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMN 600
           VKKEPACSWVEIEN +H+FVAND+ HP REEI R WE++  KIKE+GYVPDTSHV+  ++
Sbjct: 504 VKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVD 563

Query: 601 QQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVR 660
           QQ+RE+ LQYHSEK+ALAFA+L TPPG TI IKKNIR+CGDCH+A K AS+V+GREIIVR
Sbjct: 564 QQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVR 623

Query: 661 DTNRFHHFLHGMCSCRDYW 679
           DTNRFHHF  G CSC+DYW
Sbjct: 624 DTNRFHHFKDGNCSCKDYW 633

BLAST of Csa1G171070 vs. Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 2.7e-139
Identity = 261/630 (41.43%), Postives = 393/630 (62.38%), Query Frame = 1

Query: 71  DLLRTTHISSSGTSSN-------------STGLYVLDLINCGSLEPERTL--YSKMLNKC 130
           +L+R  H S S + +N             S G     L+    L PE     Y  +LN C
Sbjct: 3   NLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNAC 62

Query: 131 TYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWT 190
              R L+ G+ +HAH+  + +     L   +L  Y KC  LE+A+ + D+MP K++VSWT
Sbjct: 63  LDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122

Query: 191 VLISGYSQSGQASEALALFPKMLHLGFQPNEFT----LSSLLKASGTGPSDHHGRQLHAF 250
            +IS YSQ+G +SEAL +F +M+    +PNEFT    L+S ++ASG G     G+Q+H  
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL----GKQIHGL 182

Query: 251 SLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHV 310
            +K+ YD ++ VGSSLLDMYA+   ++EA+ IF  L  ++VVS  A+IAG+A+ G  E  
Sbjct: 183 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 242

Query: 311 MRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDM 370
           + +F ++  +G  P + TY+S+ TA +    L+ GK  H HV++      A + N+LIDM
Sbjct: 243 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 302

Query: 371 YAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK-VQPNEIT 430
           Y+K G++  A+++F  + ++  +SWN+++ GY++HGLG E L+LF  M   K V+P+ +T
Sbjct: 303 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 362

Query: 431 FLSVLTACSHSGLLDEGQYYFELMK--KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 490
            L+VL+ CSH  + D G   F+ M   ++  +    H+  +VD+LGRAGR++EA +FI+ 
Sbjct: 363 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 422

Query: 491 MPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 550
           MP KPTA V G+LLG+CR+H ++D+G     ++ E++P ++G +V+LSN+YASAGR +D 
Sbjct: 423 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 482

Query: 551 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 610
             VR MM +  V KEP  SW++ E  +H F AND +HP REE+    ++IS K+K+ GYV
Sbjct: 483 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 542

Query: 611 PDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFA 670
           PD S VL+ ++++ +E  L  HSEKLAL F ++ T  G+ IR+ KN+RIC DCH+  K  
Sbjct: 543 PDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIF 602

Query: 671 SRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           S+V  RE+ +RD NRFH  + G+CSC DYW
Sbjct: 603 SKVFEREVSLRDKNRFHQIVDGICSCGDYW 628

BLAST of Csa1G171070 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 3.3e-137
Identity = 254/602 (42.19%), Postives = 364/602 (60.47%), Query Frame = 1

Query: 81  SGTSSNSTGLYVLDLINC---GSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFE 140
           +G S N      L+++      +L+P       +L   + LR +  G+ IH +   S F+
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268

Query: 141 DDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM 200
             + +   +++MYAKCGSLE A+ LFD M  +++VSW  +I  Y Q+    EA+ +F KM
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328

Query: 201 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 260
           L  G +P + ++   L A         GR +H  S++ G D NV V +SL+ MY +   +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388

Query: 261 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 320
             A  +F  L ++ +VSWNA+I G A+ G     +  F QM  +  +P  FTY SV TA 
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448

Query: 321 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 380
           A        KW+H  V++S      ++   L+DMYAK G+I  A+ +F  + ++ + +WN
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 508

Query: 381 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK- 440
           ++I GY  HG G  AL+LFE+M K  ++PN +TFLSV++ACSHSGL++ G   F +MK+ 
Sbjct: 509 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 568

Query: 441 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVY 500
           + IE  + H+  +VDLLGRAGRLNEA  FI +MP+KP   V+GA+LG+C++HKN++    
Sbjct: 569 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 628

Query: 501 AAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVH 560
           AAE++FEL+P D G HVLL+NIY +A       +VR  M   G++K P CS VEI+NEVH
Sbjct: 629 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 688

Query: 561 VFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLAL 620
            F +   +HP  ++I    EK+   IKE GYVPDT+ VL   N    +L L  HSEKLA+
Sbjct: 689 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQL-LSTHSEKLAI 748

Query: 621 AFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRD 679
           +F +L T  G TI ++KN+R+C DCH+A K+ S V GREI+VRD  RFHHF +G CSC D
Sbjct: 749 SFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGD 808


HSP 2 Score: 227.3 bits (578), Expect = 5.2e-58
Identity = 132/442 (29.86%), Postives = 232/442 (52.49%), Query Frame = 1

Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           +EP    ++ +L  C    +L+ G+ IH  +  S F  DL  +  + NMYAKC  + EA+
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190

Query: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
            +FD+MP +D+VSW  +++GYSQ+G A  AL +   M     +P+  T+ S+L A     
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250

Query: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
               G+++H ++++ G+D  V++ ++L+DMYA+   +  A+ +F+ +  +NVVSWN++I 
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310

Query: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
            + +    +  M +F +ML +G +PT  +      ACA  G LE+G+++H   ++ G   
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370

Query: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
              + N+LI MY K   +  A  +F +L  + +VSWN++I G+AQ+G   +AL  F QM 
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430

Query: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 460
              V+P+  T++SV+TA +   +    ++   ++ +  ++  V     +VD+  + G + 
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490

Query: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPH--VLLSNI 520
            A + I +M  +     W A++     H     G  A E   E+      P+    LS I
Sbjct: 491 IA-RLIFDMMSERHVTTWNAMIDGYGTH---GFGKAALELFEEMQKGTIKPNGVTFLSVI 550

Query: 521 YA--SAGRLSDAAKVRKMMKES 539
            A   +G +    K   MMKE+
Sbjct: 551 SACSHSGLVEAGLKCFYMMKEN 568


HSP 3 Score: 178.3 bits (451), Expect = 2.8e-43
Identity = 93/376 (24.73%), Postives = 205/376 (54.52%), Query Frame = 1

Query: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNF----ILNMYAKCGSLEEAQDLFDKM 170
           +L +C+ L++L+Q       I    F++ L   +F    +++++ + GS++EA  +F+ +
Sbjct: 43  LLERCSSLKELRQ-------ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI 102

Query: 171 PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGR 230
            +K  V +  ++ G+++     +AL  F +M +   +P  +  + LLK  G       G+
Sbjct: 103 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 162

Query: 231 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 290
           ++H   +K G+ +++   + L +MYA+   + EA+ +F+ +  +++VSWN ++AG+++ G
Sbjct: 163 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 222

Query: 291 EGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 350
                + +   M  +  +P+  T  SV  A ++   +  GK +H + ++SG   +  I  
Sbjct: 223 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 282

Query: 351 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 410
            L+DMYAK GS++ A+++F  ++++++VSWNS+I  Y Q+    EA+ +F++ML   V+P
Sbjct: 283 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 342

Query: 411 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFI 470
            +++ +  L AC+  G L+ G++  +L  +  ++  V+   +++ +  +   ++ A    
Sbjct: 343 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 402

Query: 471 EEMPIKPTAAVWGALL 483
            ++  + T   W A++
Sbjct: 403 GKLQSR-TLVSWNAMI 410

BLAST of Csa1G171070 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 478.4 bits (1230), Expect = 1.3e-133
Identity = 233/577 (40.38%), Postives = 361/577 (62.56%), Query Frame = 1

Query: 103  PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
            P +  Y  +L  C  L  L+ G  IH+ I  + F+ +  + + +++MYAK G L+ A D+
Sbjct: 488  PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547

Query: 163  FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222
              +   KD+VSWT +I+GY+Q     +AL  F +ML  G + +E  L++ + A     + 
Sbjct: 548  LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607

Query: 223  HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282
              G+Q+HA +   G+  ++   ++L+ +Y+R   + E+ + F    A + ++WNAL++G 
Sbjct: 608  KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667

Query: 283  ARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIA 342
             + G  E  +R+F++M R+G +  +FT+ S   A + + +++QGK VHA + K+G     
Sbjct: 668  QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727

Query: 343  YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 402
             + N LI MYAK GSI DA+K F  +  ++ VSWN+II+ Y++HG G+EAL  F+QM+ +
Sbjct: 728  EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787

Query: 403  KVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNE 462
             V+PN +T + VL+ACSH GL+D+G  YFE M  ++ +  +  H+V VVD+L RAG L+ 
Sbjct: 788  NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847

Query: 463  ANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYAS 522
            A +FI+EMPIKP A VW  LL +C +HKNM++G +AA  + EL+P DS  +VLLSN+YA 
Sbjct: 848  AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907

Query: 523  AGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGK 582
            + +       R+ MKE GVKKEP  SW+E++N +H F   D +HP+ +EI   ++ ++ +
Sbjct: 908  SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 967

Query: 583  IKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDC 642
              EIGYV D   +L  +  + ++  +  HSEKLA++F +L  P  + I + KN+R+C DC
Sbjct: 968  ASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDC 1027

Query: 643  HSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
            H+  KF S+V  REIIVRD  RFHHF  G CSC+DYW
Sbjct: 1028 HAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064


HSP 2 Score: 208.0 bits (528), Expect = 3.3e-52
Identity = 119/401 (29.68%), Postives = 200/401 (49.88%), Query Frame = 1

Query: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
           +YVL ++      P    +S +L+ C  +  L+ G  +H  +    F  D  + N ++++
Sbjct: 279 MYVLGIM------PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 338

Query: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
           Y   G+L  A+ +F  M  +D V++  LI+G SQ G   +A+ LF +M   G +P+  TL
Sbjct: 339 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 398

Query: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
           +SL+ A     +   G+QLHA++ K G+  N  +  +LL++YA+ A +  A   F     
Sbjct: 399 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 458

Query: 270 KNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWV 329
           +NVV WN ++  +    +  +  R+F QM  +   P  +TY S+   C   G LE G+ +
Sbjct: 459 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 518

Query: 330 HAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLG 389
           H+ +IK+  Q  AY+ + LIDMYAK G +  A  +  R   +D+VSW ++I+GY Q+   
Sbjct: 519 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 578

Query: 390 AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTV 449
            +AL  F QML   ++ +E+   + ++AC+    L EGQ            + +     +
Sbjct: 579 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 638

Query: 450 VDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKN 491
           V L  R G++ E+    E+       A W AL+   +   N
Sbjct: 639 VTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 672


HSP 3 Score: 180.6 bits (457), Expect = 5.6e-44
Identity = 113/449 (25.17%), Postives = 212/449 (47.22%), Query Frame = 1

Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           LEP+    + ++  C+    L +G+ +HA+     F  +  +   +LN+YAKC  +E A 
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444

Query: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
           D F +   +++V W V++  Y        +  +F +M      PN++T  S+LK      
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504

Query: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
               G Q+H+  +K  + +N +V S L+DMYA+   +  A  I    A K+VVSW  +IA
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564

Query: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
           G+ +    +  +  F QML +G        ++  +ACA   +L++G+ +HA    SG   
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624

Query: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
                N L+ +Y++ G I+++   F +    D ++WN+++SG+ Q G   EAL++F +M 
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684

Query: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 460
           +  +  N  TF S + A S +  + +G+    ++ K   +++      ++ +  + G ++
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744

Query: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGP-HVLLSNIY 520
           +A K   E+  K   + W A++ +   H     G  A +   ++   +  P HV L  + 
Sbjct: 745 DAEKQFLEVSTKNEVS-WNAIINAYSKH---GFGSEALDSFDQMIHSNVRPNHVTLVGVL 804

Query: 521 ASAGRL----SDAAKVRKMMKESGVKKEP 545
           ++   +       A    M  E G+  +P
Sbjct: 805 SACSHIGLVDKGIAYFESMNSEYGLSPKP 829


HSP 4 Score: 174.5 bits (441), Expect = 4.0e-42
Identity = 101/336 (30.06%), Postives = 176/336 (52.38%), Query Frame = 1

Query: 127 IHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQ 186
           IHA I      D  V+ N ++++Y++ G ++ A+ +FD +  KD  SW  +ISG S++  
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268

Query: 187 ASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSS 246
            +EA+ LF  M  LG  P  +  SS+L A     S   G QLH   LK G+  + +V ++
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328

Query: 247 LLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPT 306
           L+ +Y    ++  A+ IF++++ ++ V++N LI G ++ G GE  M LF +M   G EP 
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388

Query: 307 HFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFR 366
             T +S+  AC++ G+L +G+ +HA+  K G      I   L+++YAK   I+ A   F 
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448

Query: 367 RLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE 426
               +++V WN ++  Y        + ++F QM   ++ PN+ T+ S+L  C   G L+ 
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508

Query: 427 GQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 463
           G+     + K   +        ++D+  + G+L+ A
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544


HSP 5 Score: 162.2 bits (409), Expect = 2.1e-38
Identity = 106/392 (27.04%), Postives = 186/392 (47.45%), Query Frame = 1

Query: 93  LDLINCGSLEPERTLYSKMLNKCTYLR-KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYA 152
           +D +    + P       +L  C      L +GR +H+ I     + +  L   + + Y 
Sbjct: 72  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131

Query: 153 KCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSS 212
             G L  A  +FD+MP + + +W  +I   +      E   LF +M+     PNE T S 
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191

Query: 213 LLKAS-GTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK 272
           +L+A  G   +     Q+HA  L  G   +  V + L+D+Y+R   +  A+ +F+ L  K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251

Query: 273 NVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVH 332
           +  SW A+I+G ++       +RLF  M   G  PT + +SSV +AC    SLE G+ +H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311

Query: 333 AHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGA 392
             V+K G     Y+ N L+ +Y   G++  A+ +F  + ++D V++N++I+G +Q G G 
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371

Query: 393 EALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVV 452
           +A++LF++M    ++P+  T  S++ ACS  G L  GQ       K    +       ++
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431

Query: 453 DLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 483
           +L  +   +  A  +  E  ++    +W  +L
Sbjct: 432 NLYAKCADIETALDYFLETEVE-NVVLWNVML 462

BLAST of Csa1G171070 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 2.2e-133
Identity = 230/580 (39.66%), Postives = 364/580 (62.76%), Query Frame = 1

Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           + P+   +  +L  C+ L  L+ GR +HA +    F+ D+ + N ++ +YAKC  L  A+
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 161 DLFD--KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGT 220
            +F+   +P + +VSWT ++S Y+Q+G+  EAL +F +M  +  +P+   L S+L A   
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234

Query: 221 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 280
                 GR +HA  +K G ++   +  SL  MYA+   +  AK++F+ + + N++ WNA+
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 281 IAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 340
           I+G+A+ G     + +F +M+ +   P   + +S  +ACA  GSLEQ + ++ +V +S  
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354

Query: 341 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 400
           +   +I + LIDM+AK GS++ A+ VF R + +D+V W+++I GY  HG   EA+ L+  
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414

Query: 401 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 460
           M +  V PN++TFL +L AC+HSG++ EG ++F  M  HKI  Q  H+  V+DLLGRAG 
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGH 474

Query: 461 LNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNI 520
           L++A + I+ MP++P   VWGALL +C+ H++++LG YAA+Q+F +DP ++G +V LSN+
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 534

Query: 521 YASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKI 580
           YA+A      A+VR  MKE G+ K+  CSWVE+   +  F   D SHP  EEI+R  E I
Sbjct: 535 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 594

Query: 581 SGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRIC 640
             ++KE G+V +    L  +N ++ E  L  HSE++A+A+ ++ TP G  +RI KN+R C
Sbjct: 595 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRAC 654

Query: 641 GDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
            +CH+A K  S+++ REI+VRDTNRFHHF  G+CSC DYW
Sbjct: 655 VNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694


HSP 2 Score: 187.2 bits (474), Expect = 6.0e-46
Identity = 107/407 (26.29%), Postives = 204/407 (50.12%), Query Frame = 1

Query: 106 TLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDK 165
           + Y+ +++  T+  +LKQ   IHA +     +    L+  +++  +  G +  A+ +FD 
Sbjct: 22  SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 81

Query: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
           +P   +  W  +I GYS++    +AL ++  M      P+ FT   LLKA         G
Sbjct: 82  LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 141

Query: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNS--LAAKNVVSWNALIAGHA 285
           R +HA   + G+D +V V + L+ +YA+   +  A+ +F    L  + +VSW A+++ +A
Sbjct: 142 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 201

Query: 286 RKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAY 345
           + GE    + +F QM +   +P      SV  A      L+QG+ +HA V+K G +    
Sbjct: 202 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 261

Query: 346 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 405
           +  +L  MYAK G +  AK +F ++   +++ WN++ISGYA++G   EA+ +F +M+   
Sbjct: 262 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 321

Query: 406 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEAN 465
           V+P+ I+  S ++AC+  G L++ +  +E + +      V     ++D+  + G + E  
Sbjct: 322 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGA 381

Query: 466 KFIEEMPIKPTAAVWGALLGSCRMH--KNMDLGVYAAEQIFELDPHD 509
           + + +  +     VW A++    +H      + +Y A +   + P+D
Sbjct: 382 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424

BLAST of Csa1G171070 vs. TrEMBL
Match: M5X1J8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 5.7e-253
Identity = 414/561 (73.80%), Postives = 496/561 (88.41%), Query Frame = 1

Query: 120 KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 179
           +L+Q R +HAHI +S F+DDL + N ILNMY KCGSLE+A++LFD+MP+KD+V+WT LIS
Sbjct: 3   RLQQARIVHAHILTSHFKDDLPIHNTILNMYVKCGSLEDARNLFDQMPSKDLVTWTALIS 62

Query: 180 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDH--HGRQLHAFSLKYGY 239
           GYSQ  +  +AL LFP+ML  G +PN+FTLSSL KA+G    D+  HGRQLHA+ LKYG+
Sbjct: 63  GYSQYDRPQDALVLFPQMLLRGLEPNQFTLSSLFKAAGAVSDDNNKHGRQLHAYCLKYGF 122

Query: 240 DMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQ 299
           D NV+VG+SL+DMYARW HM E+++IF+SL  KN VSWNALIAGHARK +GEH +RLF +
Sbjct: 123 DTNVYVGTSLVDMYARWGHMDESQLIFDSLETKNEVSWNALIAGHARKAQGEHALRLFWK 182

Query: 300 MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGS 359
           MLR+GF+PTHFTYSSVFTACAS+GS+EQGKWVHAH+IKSG + +A++GNTL+DMYAKSGS
Sbjct: 183 MLREGFKPTHFTYSSVFTACASAGSMEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGS 242

Query: 360 IKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTA 419
           I+DA+KVF RLV+QDIVSWNS+++GYAQHGLG E +Q FE+ML+  +QPN+ITFL VLTA
Sbjct: 243 IEDARKVFDRLVRQDIVSWNSMLTGYAQHGLGQETVQRFEEMLRIGIQPNDITFLCVLTA 302

Query: 420 CSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 479
           CSH+GLLDEGQYYF+LMK + IE Q++H+VT+VDLLGRAG L+ A KFI EMPI+PTAAV
Sbjct: 303 CSHAGLLDEGQYYFDLMKSYNIELQISHYVTIVDLLGRAGLLDRAAKFIREMPIEPTAAV 362

Query: 480 WGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 539
           WGALLG+CRMHKN+DLG YAAE++FELDPHDSGPHVLLSNIYASAGRLSDAA+VRK+MK+
Sbjct: 363 WGALLGACRMHKNIDLGAYAAERVFELDPHDSGPHVLLSNIYASAGRLSDAARVRKLMKD 422

Query: 540 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 599
            GVKKEPACSWVEIEN VH+FVANDD+HP R EI +MWE ISGKIK+IGYVPDTSHVLFF
Sbjct: 423 CGVKKEPACSWVEIENAVHMFVANDDAHPQRVEILQMWETISGKIKDIGYVPDTSHVLFF 482

Query: 600 MNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREII 659
           ++QQ+RE+KLQYHSEKLALAFA+L T PG TIRIKKNIR+CGDCHSA K+ S+V GREII
Sbjct: 483 VDQQEREVKLQYHSEKLALAFALLNTTPGSTIRIKKNIRVCGDCHSAIKYVSKVEGREII 542

Query: 660 VRDTNRFHHFLHGMCSCRDYW 679
           VRDTNRFHHF +G CSCRDYW
Sbjct: 543 VRDTNRFHHFRNGSCSCRDYW 563

BLAST of Csa1G171070 vs. TrEMBL
Match: M5X1J8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 4.5e-16
Identity = 52/179 (29.05%), Postives = 90/179 (50.28%), Query Frame = 1

Query: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
           +P    YS +   C     ++QG+ +HAH+  S  +    + N +L+MYAK GS+E+A+ 
Sbjct: 189 KPTHFTYSSVFTACASAGSMEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGSIEDARK 248

Query: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
           +FD++  +D+VSW  +++GY+Q G   E +  F +ML +G QPN+ T   +L A      
Sbjct: 249 VFDRLVRQDIVSWNSMLTGYAQHGLGQETVQRFEEMLRIGIQPNDITFLCVLTACSHAGL 308

Query: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM-REAKVIFNSLAAKNVVSWNALI 280
              G+        Y  ++ +    +++D+  R   + R AK I           W AL+
Sbjct: 309 LDEGQYYFDLMKSYNIELQISHYVTIVDLLGRAGLLDRAAKFIREMPIEPTAAVWGALL 367


HSP 2 Score: 878.6 bits (2269), Expect = 4.8e-252
Identity = 435/657 (66.21%), Postives = 527/657 (80.21%), Query Frame = 1

Query: 26  KLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSS 85
           KLK+   +  A++Y T          +   WD C++  + +++D+DLL+ + +  SGT  
Sbjct: 27  KLKSRVAYA-ASRYSTYAIASTLLPRQQTKWDYCSSS-SCIIEDKDLLQKS-LHPSGT-- 86

Query: 86  NSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNF 145
              GL+VLDL++ GSLEP R LY  +L KCT LRK K G+ +HAHI +S F  DLV+LN 
Sbjct: 87  ---GLHVLDLLDQGSLEPHRALYHLLLKKCTRLRKPKLGKIVHAHILNSLFRHDLVILNS 146

Query: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205
           +LNMYAKCG L++A++LFD+MP KDMVSWT LI+ YSQ G+   A+ LFP ML LGF PN
Sbjct: 147 LLNMYAKCGCLDDARNLFDQMPVKDMVSWTTLITAYSQHGRPFHAILLFPHMLSLGFFPN 206

Query: 206 EFTLSSLLKASGTGPSD----HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAK 265
           +FTLSSLLKAS   P       HG QLHAF  K G   NV+VGSSLLDMYAR   M EA+
Sbjct: 207 QFTLSSLLKASAALPDTPHIHFHGTQLHAFCFKCGLHSNVYVGSSLLDMYARCGCMDEAR 266

Query: 266 VIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSG 325
           +IF++L +KN VSWNALIAGHARKG+ +H + LF +MLRQ F+PTHFT+ S+  ACAS+G
Sbjct: 267 LIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQDFQPTHFTFCSILGACASTG 326

Query: 326 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIIS 385
           SLEQGKWVHAHVIKSGG+ +A++GNTL+ MYAKSGSI+DAK +F RLVK D+VSWNS+++
Sbjct: 327 SLEQGKWVHAHVIKSGGEIVAFMGNTLLHMYAKSGSIQDAKMIFDRLVKSDVVSWNSMLT 386

Query: 386 GYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEA 445
            YAQHGLG EA+Q F++ML+  V PN+ITFL +LTACS +GLLD+GQYYF+LM  + IE 
Sbjct: 387 AYAQHGLGKEAVQWFQEMLRIGVGPNDITFLCLLTACSRAGLLDQGQYYFKLMSNYNIEP 446

Query: 446 QVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQI 505
           Q++H+VT+VDL GRAG L++A +FI EMPIKPTAAVWGALLG+CRMHKNM+LG YAAE++
Sbjct: 447 QISHYVTIVDLFGRAGLLDKAERFIREMPIKPTAAVWGALLGACRMHKNMELGTYAAERV 506

Query: 506 FELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVAN 565
           FELDPHDSGP VLLSNIYASAGR SDAAKVRKMMKESGVKKEPACSWVEIEN VHVFVAN
Sbjct: 507 FELDPHDSGPLVLLSNIYASAGRWSDAAKVRKMMKESGVKKEPACSWVEIENTVHVFVAN 566

Query: 566 DDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVL 625
           DD+HP  EEI +MWE+IS +IKEIGYVPD SHVLF+M+QQ+RE+KLQYHSEKLALAFA+L
Sbjct: 567 DDAHPQMEEIHKMWEEISARIKEIGYVPDISHVLFYMDQQEREIKLQYHSEKLALAFALL 626

Query: 626 KTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
            + PG TIRIKKNIR+CGDCHSA KF S+V+ REIIVRDTNRFHHF  G CSC DYW
Sbjct: 627 NSSPGSTIRIKKNIRVCGDCHSAIKFVSQVVRREIIVRDTNRFHHFRGGSCSCGDYW 675

BLAST of Csa1G171070 vs. TrEMBL
Match: F6GZB2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0455g00030 PE=4 SV=1)

HSP 1 Score: 869.8 bits (2246), Expect = 2.2e-249
Identity = 432/645 (66.98%), Postives = 516/645 (80.00%), Query Frame = 1

Query: 35  FAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLD 94
           FA  +     F +SN +E +D D   A F  V QD+DLLR +       S   TGLY LD
Sbjct: 26  FATIHAPAAPFSDSNDSEVEDGD--AASFC-VFQDKDLLRKSQ------SDGGTGLYALD 85

Query: 95  LINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDD-LVLLNFILNMYAKC 154
           LI  GSL P+  LYSK+L +CT L K++QGR +HAH+  S F D+ LVL N I+NMYAKC
Sbjct: 86  LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 145

Query: 155 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 214
           G L++A+ +FD+MPTKDMV+WT LI+G+SQ+ +  +AL LFP+ML LGFQPN FTLSSLL
Sbjct: 146 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 205

Query: 215 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 274
           KASG+      G QLHAF LKYGY  +V+VGS+L+DMYAR  HM  A++ F+ +  K+ V
Sbjct: 206 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 265

Query: 275 SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 334
           SWNALI+GHARKGEGEH + L  +M R+ F+PTHFTYSSV +ACAS G+LEQGKWVHAH+
Sbjct: 266 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHM 325

Query: 335 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEAL 394
           IKSG + IA+IGNTL+DMYAK+GSI DAK+VF RLVK D+VSWN++++G AQHGLG E L
Sbjct: 326 IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETL 385

Query: 395 QLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLL 454
             FEQML+  ++PNEI+FL VLTACSHSGLLDEG YYFELMKK+K+E  V H+VT VDLL
Sbjct: 386 DRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLL 445

Query: 455 GRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHV 514
           GR G L+ A +FI EMPI+PTAAVWGALLG+CRMHKNM+LGVYAAE+ FELDPHDSGP +
Sbjct: 446 GRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRM 505

Query: 515 LLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQR 574
           LLSNIYASAGR  D AKVRKMMKESGVKK+PACSWVEIEN VH+FVAND++HP  +EI+ 
Sbjct: 506 LLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRG 565

Query: 575 MWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKK 634
            WE+ISGKIKEIGYVPDTSHVL F++QQ+RE KLQYHSEKLALAFA+L TP G  IRIKK
Sbjct: 566 KWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKK 625

Query: 635 NIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           NIR+CGDCH+A KF S+V+ REIIVRDTNRFH F  G CSC DYW
Sbjct: 626 NIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGSCSCGDYW 661

BLAST of Csa1G171070 vs. TrEMBL
Match: A0A0D2NHM0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G032400 PE=4 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 4.1e-243
Identity = 414/617 (67.10%), Postives = 507/617 (82.17%), Query Frame = 1

Query: 66  VLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGR 125
           ++QD+DLL  + ++ SGT     GL+VLDL++ GSLEP  TLY  +L KCT+LRK K G+
Sbjct: 48  IVQDKDLLLKS-LNPSGT-----GLHVLDLVDEGSLEPHPTLYHLLLKKCTFLRKPKLGK 107

Query: 126 AIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSG 185
            +HAHI +S F  D+V+LN +LNMYAKCG L++A++LFD+M  KDMV+WT LI+ YSQ  
Sbjct: 108 IVHAHISNSHFRGDVVILNTLLNMYAKCGCLDDARNLFDEMSVKDMVTWTTLITAYSQHD 167

Query: 186 QASEALALFPKMLHLGFQPNEFTLSSLLKASG----TGPSDHHGRQLHAFSLKYGYDMNV 245
           +  +AL LFP+ML LGF PNEFTLSSLLKAS     T     HG QLH FS K G+  NV
Sbjct: 168 RPLDALLLFPQMLSLGFFPNEFTLSSLLKASAALSDTPQIYFHGAQLHGFSFKCGFHSNV 227

Query: 246 HVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQ 305
           +VGSSLLDMYAR   M EA  +F+ L  KN VSWNALIA HARKG+ +  + LFL+MLRQ
Sbjct: 228 YVGSSLLDMYARCGCMDEAHFVFDVLPTKNEVSWNALIADHARKGQLDRALSLFLKMLRQ 287

Query: 306 GFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDA 365
            F+PTHFT+SS+F ACAS+GSLEQGKWVHAHVIKSGG+ IA++GNTL+ MYAKSGSI+DA
Sbjct: 288 DFQPTHFTFSSIFGACASTGSLEQGKWVHAHVIKSGGEIIAFMGNTLLHMYAKSGSIQDA 347

Query: 366 KKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHS 425
           K +F RLVK+D+VSWNS+++ YAQHGLG EA+Q F++ML   + PN+ITFL +LTACS +
Sbjct: 348 KMIFDRLVKRDLVSWNSMLTAYAQHGLGKEAVQCFQKMLNIGLVPNDITFLCLLTACSRA 407

Query: 426 GLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL 485
           GLL+EGQYYF+ M ++ IE  ++H+VT+VDLLGRAG LNEA +FI EMPI+PTAAVWGAL
Sbjct: 408 GLLEEGQYYFKSMNRYNIEPGISHYVTIVDLLGRAGLLNEALRFINEMPIQPTAAVWGAL 467

Query: 486 LGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVK 545
           LG+CRMHKN+++G +AAE++FELDPHDSGPHVLLSNIYAS  R  DAAKVRK+MKESGVK
Sbjct: 468 LGACRMHKNVEMGSFAAERVFELDPHDSGPHVLLSNIYASGNRWRDAAKVRKLMKESGVK 527

Query: 546 KEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQ 605
           KEPACSWVEI+N VH+FVA+DDSHP    I + WE+IS +IKEIGYVPDTSHVLF+M++Q
Sbjct: 528 KEPACSWVEIQNTVHMFVASDDSHPQMGAIYKKWEEISARIKEIGYVPDTSHVLFYMDEQ 587

Query: 606 DRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDT 665
           +RE+KLQYHSEKLALAFA+L +P G TIRIKKNIR+CGDCHSAFKF S+V+GREIIVRDT
Sbjct: 588 EREVKLQYHSEKLALAFALLNSPDGSTIRIKKNIRVCGDCHSAFKFVSKVVGREIIVRDT 647

Query: 666 NRFHHFLHGMCSCRDYW 679
           NRFHHF  G CSC ++W
Sbjct: 648 NRFHHFYDGSCSCGNFW 658

BLAST of Csa1G171070 vs. TrEMBL
Match: A0A067GG88_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047067mg PE=4 SV=1)

HSP 1 Score: 842.4 bits (2175), Expect = 3.8e-241
Identity = 401/566 (70.85%), Postives = 480/566 (84.81%), Query Frame = 1

Query: 114 KCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVS 173
           KCT+L+KLK+ R +HAHI  S F++D+ + N ILN YAKCG L+EA+ LFD+MP KDMV+
Sbjct: 1   KCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMPVKDMVT 60

Query: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHH-GRQLHAFS 233
           WT LISGYSQ+ Q   A+ LF +ML LG +PN+FTLSS+LKASG G +D   GRQ+HAF 
Sbjct: 61  WTALISGYSQNDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFGRQVHAFC 120

Query: 234 LKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVM 293
           LKYGYD NV+VGSSLLDMYAR+  M +A  +F +L +KN VSWNALIAGHARK EGE  +
Sbjct: 121 LKYGYDWNVYVGSSLLDMYARFDQMDDAWFLFTALESKNEVSWNALIAGHARKSEGEKAL 180

Query: 294 RLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMY 353
           R F +MLR+GFEPTHF+YSSVFTA AS+GSLEQGKWVHAHVIKSGGQ +A++GNTL+DMY
Sbjct: 181 RTFSEMLREGFEPTHFSYSSVFTALASTGSLEQGKWVHAHVIKSGGQLVAFVGNTLVDMY 240

Query: 354 AKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFL 413
           AKSGSI+DA+KVF RL+K+D+VSWNS+++G AQHGLG   ++ FE+ML+  + PN++TFL
Sbjct: 241 AKSGSIEDAEKVFNRLLKRDVVSWNSMLTGCAQHGLGKATVRWFEKMLRNGIAPNQVTFL 300

Query: 414 SVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK 473
            VLTACSH+GLLDEGQ YF LMKKH +E + AH+VT VDLLGRAG L+ A KFI EMPI+
Sbjct: 301 CVLTACSHAGLLDEGQGYFALMKKHGVEPEEAHYVTFVDLLGRAGLLDRALKFIREMPIE 360

Query: 474 PTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVR 533
           PTAAVWGALLG+CRMHKN++LG YAAE+IFELDPHDSGPH+LL+NIYASAGRL+DAA+ R
Sbjct: 361 PTAAVWGALLGACRMHKNVELGAYAAERIFELDPHDSGPHILLANIYASAGRLNDAARAR 420

Query: 534 KMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTS 593
           KMMKESGVKKEPACSWVE +N VH+FVANDD+HP R  I + W +IS KIK+IGYVPD+S
Sbjct: 421 KMMKESGVKKEPACSWVETKNAVHMFVANDDAHPQRAMIHKKWREISEKIKQIGYVPDSS 480

Query: 594 HVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVL 653
           HVL + +QQ+RE KLQ HSEKLALAFA++ TPPG TI IKKNIR+CGDCHSAFKFAS+V+
Sbjct: 481 HVLSYADQQEREAKLQVHSEKLALAFALISTPPGSTIHIKKNIRVCGDCHSAFKFASKVV 540

Query: 654 GREIIVRDTNRFHHFLHGMCSCRDYW 679
            REIIVRDTNRFHHF  G CSC DYW
Sbjct: 541 EREIIVRDTNRFHHFRDGFCSCGDYW 566

BLAST of Csa1G171070 vs. TAIR10
Match: AT3G24000.1 (AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 769.2 bits (1985), Expect = 2.1e-222
Identity = 374/608 (61.51%), Postives = 467/608 (76.81%), Query Frame = 1

Query: 61  APFTGVLQDEDLLRTTHISSSGTSSNST-GLYVLDLINCGSLEPERTLYSKMLNKCTYLR 120
           AP +   +DE L   ++     TSSN   G Y+           +R  Y+ +L KCT  +
Sbjct: 24  APVSEDSEDESLKFPSNDLLLRTSSNDLEGSYI---------PADRRFYNTLLKKCTVFK 83

Query: 121 KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 180
            L QGR +HAHI  S F  D+V+ N +LNMYAKCGSLEEA+ +F+KMP +D V+WT LIS
Sbjct: 84  LLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLIS 143

Query: 181 GYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDM 240
           GYSQ  +  +AL  F +ML  G+ PNEFTLSS++KA+        G QLH F +K G+D 
Sbjct: 144 GYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS 203

Query: 241 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQML 300
           NVHVGS+LLD+Y R+  M +A+++F++L ++N VSWNALIAGHAR+   E  + LF  ML
Sbjct: 204 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 263

Query: 301 RQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 360
           R GF P+HF+Y+S+F AC+S+G LEQGKWVHA++IKSG + +A+ GNTL+DMYAKSGSI 
Sbjct: 264 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 323

Query: 361 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 420
           DA+K+F RL K+D+VSWNS+++ YAQHG G EA+  FE+M +  ++PNEI+FLSVLTACS
Sbjct: 324 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 383

Query: 421 HSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWG 480
           HSGLLDEG +Y+ELMKK  I  +  H+VTVVDLLGRAG LN A +FIEEMPI+PTAA+W 
Sbjct: 384 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 443

Query: 481 ALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESG 540
           ALL +CRMHKN +LG YAAE +FELDP D GPHV+L NIYAS GR +DAA+VRK MKESG
Sbjct: 444 ALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESG 503

Query: 541 VKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMN 600
           VKKEPACSWVEIEN +H+FVAND+ HP REEI R WE++  KIKE+GYVPDTSHV+  ++
Sbjct: 504 VKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVD 563

Query: 601 QQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVR 660
           QQ+RE+ LQYHSEK+ALAFA+L TPPG TI IKKNIR+CGDCH+A K AS+V+GREIIVR
Sbjct: 564 QQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVR 622

Query: 661 DTNRFHHF 668
           DTNRFHHF
Sbjct: 624 DTNRFHHF 622

BLAST of Csa1G171070 vs. TAIR10
Match: AT3G13770.1 (AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 497.3 bits (1279), Expect = 1.5e-140
Identity = 261/630 (41.43%), Postives = 393/630 (62.38%), Query Frame = 1

Query: 71  DLLRTTHISSSGTSSN-------------STGLYVLDLINCGSLEPERTL--YSKMLNKC 130
           +L+R  H S S + +N             S G     L+    L PE     Y  +LN C
Sbjct: 3   NLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNAC 62

Query: 131 TYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWT 190
              R L+ G+ +HAH+  + +     L   +L  Y KC  LE+A+ + D+MP K++VSWT
Sbjct: 63  LDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122

Query: 191 VLISGYSQSGQASEALALFPKMLHLGFQPNEFT----LSSLLKASGTGPSDHHGRQLHAF 250
            +IS YSQ+G +SEAL +F +M+    +PNEFT    L+S ++ASG G     G+Q+H  
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL----GKQIHGL 182

Query: 251 SLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHV 310
            +K+ YD ++ VGSSLLDMYA+   ++EA+ IF  L  ++VVS  A+IAG+A+ G  E  
Sbjct: 183 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 242

Query: 311 MRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDM 370
           + +F ++  +G  P + TY+S+ TA +    L+ GK  H HV++      A + N+LIDM
Sbjct: 243 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 302

Query: 371 YAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK-VQPNEIT 430
           Y+K G++  A+++F  + ++  +SWN+++ GY++HGLG E L+LF  M   K V+P+ +T
Sbjct: 303 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 362

Query: 431 FLSVLTACSHSGLLDEGQYYFELMK--KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 490
            L+VL+ CSH  + D G   F+ M   ++  +    H+  +VD+LGRAGR++EA +FI+ 
Sbjct: 363 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 422

Query: 491 MPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 550
           MP KPTA V G+LLG+CR+H ++D+G     ++ E++P ++G +V+LSN+YASAGR +D 
Sbjct: 423 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 482

Query: 551 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 610
             VR MM +  V KEP  SW++ E  +H F AND +HP REE+    ++IS K+K+ GYV
Sbjct: 483 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 542

Query: 611 PDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFA 670
           PD S VL+ ++++ +E  L  HSEKLAL F ++ T  G+ IR+ KN+RIC DCH+  K  
Sbjct: 543 PDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIF 602

Query: 671 SRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           S+V  RE+ +RD NRFH  + G+CSC DYW
Sbjct: 603 SKVFEREVSLRDKNRFHQIVDGICSCGDYW 628

BLAST of Csa1G171070 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 490.3 bits (1261), Expect = 1.9e-138
Identity = 254/602 (42.19%), Postives = 364/602 (60.47%), Query Frame = 1

Query: 81  SGTSSNSTGLYVLDLINC---GSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFE 140
           +G S N      L+++      +L+P       +L   + LR +  G+ IH +   S F+
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268

Query: 141 DDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM 200
             + +   +++MYAKCGSLE A+ LFD M  +++VSW  +I  Y Q+    EA+ +F KM
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328

Query: 201 LHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHM 260
           L  G +P + ++   L A         GR +H  S++ G D NV V +SL+ MY +   +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388

Query: 261 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 320
             A  +F  L ++ +VSWNA+I G A+ G     +  F QM  +  +P  FTY SV TA 
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448

Query: 321 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 380
           A        KW+H  V++S      ++   L+DMYAK G+I  A+ +F  + ++ + +WN
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 508

Query: 381 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK- 440
           ++I GY  HG G  AL+LFE+M K  ++PN +TFLSV++ACSHSGL++ G   F +MK+ 
Sbjct: 509 AMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 568

Query: 441 HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVY 500
           + IE  + H+  +VDLLGRAGRLNEA  FI +MP+KP   V+GA+LG+C++HKN++    
Sbjct: 569 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 628

Query: 501 AAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVH 560
           AAE++FEL+P D G HVLL+NIY +A       +VR  M   G++K P CS VEI+NEVH
Sbjct: 629 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 688

Query: 561 VFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLAL 620
            F +   +HP  ++I    EK+   IKE GYVPDT+ VL   N    +L L  HSEKLA+
Sbjct: 689 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQL-LSTHSEKLAI 748

Query: 621 AFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRD 679
           +F +L T  G TI ++KN+R+C DCH+A K+ S V GREI+VRD  RFHHF +G CSC D
Sbjct: 749 SFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGD 808


HSP 2 Score: 227.3 bits (578), Expect = 2.9e-59
Identity = 132/442 (29.86%), Postives = 232/442 (52.49%), Query Frame = 1

Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           +EP    ++ +L  C    +L+ G+ IH  +  S F  DL  +  + NMYAKC  + EA+
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190

Query: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
            +FD+MP +D+VSW  +++GYSQ+G A  AL +   M     +P+  T+ S+L A     
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250

Query: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
               G+++H ++++ G+D  V++ ++L+DMYA+   +  A+ +F+ +  +NVVSWN++I 
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310

Query: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
            + +    +  M +F +ML +G +PT  +      ACA  G LE+G+++H   ++ G   
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370

Query: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
              + N+LI MY K   +  A  +F +L  + +VSWN++I G+AQ+G   +AL  F QM 
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430

Query: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 460
              V+P+  T++SV+TA +   +    ++   ++ +  ++  V     +VD+  + G + 
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490

Query: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPH--VLLSNI 520
            A + I +M  +     W A++     H     G  A E   E+      P+    LS I
Sbjct: 491 IA-RLIFDMMSERHVTTWNAMIDGYGTH---GFGKAALELFEEMQKGTIKPNGVTFLSVI 550

Query: 521 YA--SAGRLSDAAKVRKMMKES 539
            A   +G +    K   MMKE+
Sbjct: 551 SACSHSGLVEAGLKCFYMMKEN 568


HSP 3 Score: 178.3 bits (451), Expect = 1.6e-44
Identity = 93/376 (24.73%), Postives = 205/376 (54.52%), Query Frame = 1

Query: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNF----ILNMYAKCGSLEEAQDLFDKM 170
           +L +C+ L++L+Q       I    F++ L   +F    +++++ + GS++EA  +F+ +
Sbjct: 43  LLERCSSLKELRQ-------ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI 102

Query: 171 PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGR 230
            +K  V +  ++ G+++     +AL  F +M +   +P  +  + LLK  G       G+
Sbjct: 103 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 162

Query: 231 QLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKG 290
           ++H   +K G+ +++   + L +MYA+   + EA+ +F+ +  +++VSWN ++AG+++ G
Sbjct: 163 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 222

Query: 291 EGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 350
                + +   M  +  +P+  T  SV  A ++   +  GK +H + ++SG   +  I  
Sbjct: 223 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 282

Query: 351 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 410
            L+DMYAK GS++ A+++F  ++++++VSWNS+I  Y Q+    EA+ +F++ML   V+P
Sbjct: 283 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 342

Query: 411 NEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFI 470
            +++ +  L AC+  G L+ G++  +L  +  ++  V+   +++ +  +   ++ A    
Sbjct: 343 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 402

Query: 471 EEMPIKPTAAVWGALL 483
            ++  + T   W A++
Sbjct: 403 GKLQSR-TLVSWNAMI 410

BLAST of Csa1G171070 vs. TAIR10
Match: AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 478.4 bits (1230), Expect = 7.3e-135
Identity = 233/577 (40.38%), Postives = 361/577 (62.56%), Query Frame = 1

Query: 103  PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
            P +  Y  +L  C  L  L+ G  IH+ I  + F+ +  + + +++MYAK G L+ A D+
Sbjct: 488  PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547

Query: 163  FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222
              +   KD+VSWT +I+GY+Q     +AL  F +ML  G + +E  L++ + A     + 
Sbjct: 548  LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607

Query: 223  HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282
              G+Q+HA +   G+  ++   ++L+ +Y+R   + E+ + F    A + ++WNAL++G 
Sbjct: 608  KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667

Query: 283  ARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIA 342
             + G  E  +R+F++M R+G +  +FT+ S   A + + +++QGK VHA + K+G     
Sbjct: 668  QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727

Query: 343  YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 402
             + N LI MYAK GSI DA+K F  +  ++ VSWN+II+ Y++HG G+EAL  F+QM+ +
Sbjct: 728  EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787

Query: 403  KVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNE 462
             V+PN +T + VL+ACSH GL+D+G  YFE M  ++ +  +  H+V VVD+L RAG L+ 
Sbjct: 788  NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847

Query: 463  ANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYAS 522
            A +FI+EMPIKP A VW  LL +C +HKNM++G +AA  + EL+P DS  +VLLSN+YA 
Sbjct: 848  AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907

Query: 523  AGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGK 582
            + +       R+ MKE GVKKEP  SW+E++N +H F   D +HP+ +EI   ++ ++ +
Sbjct: 908  SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKR 967

Query: 583  IKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDC 642
              EIGYV D   +L  +  + ++  +  HSEKLA++F +L  P  + I + KN+R+C DC
Sbjct: 968  ASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDC 1027

Query: 643  HSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
            H+  KF S+V  REIIVRD  RFHHF  G CSC+DYW
Sbjct: 1028 HAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064


HSP 2 Score: 208.0 bits (528), Expect = 1.8e-53
Identity = 119/401 (29.68%), Postives = 200/401 (49.88%), Query Frame = 1

Query: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
           +YVL ++      P    +S +L+ C  +  L+ G  +H  +    F  D  + N ++++
Sbjct: 279 MYVLGIM------PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 338

Query: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
           Y   G+L  A+ +F  M  +D V++  LI+G SQ G   +A+ LF +M   G +P+  TL
Sbjct: 339 YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 398

Query: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269
           +SL+ A     +   G+QLHA++ K G+  N  +  +LL++YA+ A +  A   F     
Sbjct: 399 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 458

Query: 270 KNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWV 329
           +NVV WN ++  +    +  +  R+F QM  +   P  +TY S+   C   G LE G+ +
Sbjct: 459 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 518

Query: 330 HAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLG 389
           H+ +IK+  Q  AY+ + LIDMYAK G +  A  +  R   +D+VSW ++I+GY Q+   
Sbjct: 519 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFD 578

Query: 390 AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTV 449
            +AL  F QML   ++ +E+   + ++AC+    L EGQ            + +     +
Sbjct: 579 DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 638

Query: 450 VDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKN 491
           V L  R G++ E+    E+       A W AL+   +   N
Sbjct: 639 VTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 672


HSP 3 Score: 180.6 bits (457), Expect = 3.1e-45
Identity = 113/449 (25.17%), Postives = 212/449 (47.22%), Query Frame = 1

Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           LEP+    + ++  C+    L +G+ +HA+     F  +  +   +LN+YAKC  +E A 
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444

Query: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
           D F +   +++V W V++  Y        +  +F +M      PN++T  S+LK      
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504

Query: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
               G Q+H+  +K  + +N +V S L+DMYA+   +  A  I    A K+VVSW  +IA
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564

Query: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
           G+ +    +  +  F QML +G        ++  +ACA   +L++G+ +HA    SG   
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 624

Query: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
                N L+ +Y++ G I+++   F +    D ++WN+++SG+ Q G   EAL++F +M 
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684

Query: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 460
           +  +  N  TF S + A S +  + +G+    ++ K   +++      ++ +  + G ++
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744

Query: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGP-HVLLSNIY 520
           +A K   E+  K   + W A++ +   H     G  A +   ++   +  P HV L  + 
Sbjct: 745 DAEKQFLEVSTKNEVS-WNAIINAYSKH---GFGSEALDSFDQMIHSNVRPNHVTLVGVL 804

Query: 521 ASAGRL----SDAAKVRKMMKESGVKKEP 545
           ++   +       A    M  E G+  +P
Sbjct: 805 SACSHIGLVDKGIAYFESMNSEYGLSPKP 829


HSP 4 Score: 174.5 bits (441), Expect = 2.3e-43
Identity = 101/336 (30.06%), Postives = 176/336 (52.38%), Query Frame = 1

Query: 127 IHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQ 186
           IHA I      D  V+ N ++++Y++ G ++ A+ +FD +  KD  SW  +ISG S++  
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268

Query: 187 ASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSS 246
            +EA+ LF  M  LG  P  +  SS+L A     S   G QLH   LK G+  + +V ++
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328

Query: 247 LLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPT 306
           L+ +Y    ++  A+ IF++++ ++ V++N LI G ++ G GE  M LF +M   G EP 
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388

Query: 307 HFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFR 366
             T +S+  AC++ G+L +G+ +HA+  K G      I   L+++YAK   I+ A   F 
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448

Query: 367 RLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE 426
               +++V WN ++  Y        + ++F QM   ++ PN+ T+ S+L  C   G L+ 
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508

Query: 427 GQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 463
           G+     + K   +        ++D+  + G+L+ A
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544


HSP 5 Score: 162.2 bits (409), Expect = 1.2e-39
Identity = 106/392 (27.04%), Postives = 186/392 (47.45%), Query Frame = 1

Query: 93  LDLINCGSLEPERTLYSKMLNKCTYLR-KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYA 152
           +D +    + P       +L  C      L +GR +H+ I     + +  L   + + Y 
Sbjct: 72  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131

Query: 153 KCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSS 212
             G L  A  +FD+MP + + +W  +I   +      E   LF +M+     PNE T S 
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191

Query: 213 LLKAS-GTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK 272
           +L+A  G   +     Q+HA  L  G   +  V + L+D+Y+R   +  A+ +F+ L  K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251

Query: 273 NVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVH 332
           +  SW A+I+G ++       +RLF  M   G  PT + +SSV +AC    SLE G+ +H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311

Query: 333 AHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGA 392
             V+K G     Y+ N L+ +Y   G++  A+ +F  + ++D V++N++I+G +Q G G 
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371

Query: 393 EALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVV 452
           +A++LF++M    ++P+  T  S++ ACS  G L  GQ       K    +       ++
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALL 431

Query: 453 DLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 483
           +L  +   +  A  +  E  ++    +W  +L
Sbjct: 432 NLYAKCADIETALDYFLETEVE-NVVLWNVML 462

BLAST of Csa1G171070 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 477.6 bits (1228), Expect = 1.2e-134
Identity = 230/580 (39.66%), Postives = 364/580 (62.76%), Query Frame = 1

Query: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
           + P+   +  +L  C+ L  L+ GR +HA +    F+ D+ + N ++ +YAKC  L  A+
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 161 DLFD--KMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGT 220
            +F+   +P + +VSWT ++S Y+Q+G+  EAL +F +M  +  +P+   L S+L A   
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234

Query: 221 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 280
                 GR +HA  +K G ++   +  SL  MYA+   +  AK++F+ + + N++ WNA+
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 281 IAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 340
           I+G+A+ G     + +F +M+ +   P   + +S  +ACA  GSLEQ + ++ +V +S  
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354

Query: 341 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 400
           +   +I + LIDM+AK GS++ A+ VF R + +D+V W+++I GY  HG   EA+ L+  
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414

Query: 401 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 460
           M +  V PN++TFL +L AC+HSG++ EG ++F  M  HKI  Q  H+  V+DLLGRAG 
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGH 474

Query: 461 LNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNI 520
           L++A + I+ MP++P   VWGALL +C+ H++++LG YAA+Q+F +DP ++G +V LSN+
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 534

Query: 521 YASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKI 580
           YA+A      A+VR  MKE G+ K+  CSWVE+   +  F   D SHP  EEI+R  E I
Sbjct: 535 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 594

Query: 581 SGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRIC 640
             ++KE G+V +    L  +N ++ E  L  HSE++A+A+ ++ TP G  +RI KN+R C
Sbjct: 595 ESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRAC 654

Query: 641 GDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
            +CH+A K  S+++ REI+VRDTNRFHHF  G+CSC DYW
Sbjct: 655 VNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694


HSP 2 Score: 187.2 bits (474), Expect = 3.4e-47
Identity = 107/407 (26.29%), Postives = 204/407 (50.12%), Query Frame = 1

Query: 106 TLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDK 165
           + Y+ +++  T+  +LKQ   IHA +     +    L+  +++  +  G +  A+ +FD 
Sbjct: 22  SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 81

Query: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
           +P   +  W  +I GYS++    +AL ++  M      P+ FT   LLKA         G
Sbjct: 82  LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 141

Query: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNS--LAAKNVVSWNALIAGHA 285
           R +HA   + G+D +V V + L+ +YA+   +  A+ +F    L  + +VSW A+++ +A
Sbjct: 142 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 201

Query: 286 RKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAY 345
           + GE    + +F QM +   +P      SV  A      L+QG+ +HA V+K G +    
Sbjct: 202 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 261

Query: 346 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 405
           +  +L  MYAK G +  AK +F ++   +++ WN++ISGYA++G   EA+ +F +M+   
Sbjct: 262 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 321

Query: 406 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEAN 465
           V+P+ I+  S ++AC+  G L++ +  +E + +      V     ++D+  + G + E  
Sbjct: 322 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGA 381

Query: 466 KFIEEMPIKPTAAVWGALLGSCRMH--KNMDLGVYAAEQIFELDPHD 509
           + + +  +     VW A++    +H      + +Y A +   + P+D
Sbjct: 382 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424

BLAST of Csa1G171070 vs. NCBI nr
Match: gi|449443492|ref|XP_004139511.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 1380.9 bits (3573), Expect = 0.0e+00
Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 1

Query: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT 60
           MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT
Sbjct: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCT 60

Query: 61  APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK 120
           APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK
Sbjct: 61  APFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRK 120

Query: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180
           LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISG 180

Query: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240
           YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN
Sbjct: 181 YSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMN 240

Query: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300
           VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR
Sbjct: 241 VHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLR 300

Query: 301 QGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD 360
           QGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD
Sbjct: 301 QGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKD 360

Query: 361 AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSH 420
           AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSH
Sbjct: 361 AKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSH 420

Query: 421 SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGA 480
           SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGA
Sbjct: 421 SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGA 480

Query: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540
           LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV
Sbjct: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGV 540

Query: 541 KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ 600
           KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ
Sbjct: 541 KKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQ 600

Query: 601 QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD 660
           QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD
Sbjct: 601 QDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRD 660

Query: 661 TNRFHHFLHGMCSCRDYW 679
           TNRFHHFLHGMCSCRDYW
Sbjct: 661 TNRFHHFLHGMCSCRDYW 678

BLAST of Csa1G171070 vs. NCBI nr
Match: gi|659128608|ref|XP_008464284.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 639/681 (93.83%), Postives = 655/681 (96.18%), Query Frame = 1

Query: 1   MVMFPHCYFNRCIGKYGRPLALSPSKLKTLSCFLFAAKYGT---PCAFVESNTAESQDWD 60
           MVMFPHCYFNRCIGKYG  LALS SKLKTL CFLFAAKYGT   PCAF ESN AESQDW+
Sbjct: 1   MVMFPHCYFNRCIGKYGL-LALSHSKLKTLRCFLFAAKYGTGLAPCAFTESNMAESQDWN 60

Query: 61  PCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTY 120
           P TAPFTGVLQDEDLLRTTHISSS  SS+STGLYVLDLINCGSLEPERTLYSKMLNKCTY
Sbjct: 61  PATAPFTGVLQDEDLLRTTHISSSDVSSSSTGLYVLDLINCGSLEPERTLYSKMLNKCTY 120

Query: 121 LRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVL 180
           LRKLKQGRAIHAHIQSS FE+D VLLNFILNMYAKCGSLEEAQDLFDKMPTKD VSWTVL
Sbjct: 121 LRKLKQGRAIHAHIQSSAFENDPVLLNFILNMYAKCGSLEEAQDLFDKMPTKDRVSWTVL 180

Query: 181 ISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY 240
           ISGYSQS +ASEALALFPKMLHLGFQPNEFTLSSLLKASG GPSD HGRQLHAFSLKYGY
Sbjct: 181 ISGYSQSRRASEALALFPKMLHLGFQPNEFTLSSLLKASGAGPSDDHGRQLHAFSLKYGY 240

Query: 241 DMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQ 300
           DMNVHVGSSLLDMYARW HMREAKVIF SLAAKNVVSWNALIAGHARKGEGEHVMRLF Q
Sbjct: 241 DMNVHVGSSLLDMYARWGHMREAKVIFKSLAAKNVVSWNALIAGHARKGEGEHVMRLFSQ 300

Query: 301 MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGS 360
           MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGS
Sbjct: 301 MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGS 360

Query: 361 IKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTA 420
           IKDAKKVF+RLVK+DIVSWNSIISGYAQHGLGAEALQLFEQ+LKAKVQPNEITFLSVLTA
Sbjct: 361 IKDAKKVFQRLVKRDIVSWNSIISGYAQHGLGAEALQLFEQVLKAKVQPNEITFLSVLTA 420

Query: 421 CSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAV 480
           CSHSGLLDEG+YYFELMKKH IE QVAHHVTVVDLLGRAGRLNEANKFIEEMP++PTAAV
Sbjct: 421 CSHSGLLDEGKYYFELMKKHGIEPQVAHHVTVVDLLGRAGRLNEANKFIEEMPMEPTAAV 480

Query: 481 WGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKE 540
           WGALLG+CRMHKNMDLGVYAAE+IFELDPHDSGPHVLLSNIYASAGRL DA  VRKMMKE
Sbjct: 481 WGALLGACRMHKNMDLGVYAAEKIFELDPHDSGPHVLLSNIYASAGRLRDAGNVRKMMKE 540

Query: 541 SGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 600
           SGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF
Sbjct: 541 SGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFF 600

Query: 601 MNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREII 660
           M+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFAS+VLGREII
Sbjct: 601 MDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASKVLGREII 660

Query: 661 VRDTNRFHHFLHGMCSCRDYW 679
           VRDTNRFHHFLHGMCSCRDYW
Sbjct: 661 VRDTNRFHHFLHGMCSCRDYW 680

BLAST of Csa1G171070 vs. NCBI nr
Match: gi|659128610|ref|XP_008464285.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 605/643 (94.09%), Postives = 621/643 (96.58%), Query Frame = 1

Query: 39  YGT---PCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDL 98
           YGT   PCAF ESN AESQDW+P TAPFTGVLQDEDLLRTTHISSS  SS+STGLYVLDL
Sbjct: 2   YGTGLAPCAFTESNMAESQDWNPATAPFTGVLQDEDLLRTTHISSSDVSSSSTGLYVLDL 61

Query: 99  INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGS 158
           INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSS FE+D VLLNFILNMYAKCGS
Sbjct: 62  INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSAFENDPVLLNFILNMYAKCGS 121

Query: 159 LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 218
           LEEAQDLFDKMPTKD VSWTVLISGYSQS +ASEALALFPKMLHLGFQPNEFTLSSLLKA
Sbjct: 122 LEEAQDLFDKMPTKDRVSWTVLISGYSQSRRASEALALFPKMLHLGFQPNEFTLSSLLKA 181

Query: 219 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 278
           SG GPSD HGRQLHAFSLKYGYDMNVHVGSSLLDMYARW HMREAKVIF SLAAKNVVSW
Sbjct: 182 SGAGPSDDHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWGHMREAKVIFKSLAAKNVVSW 241

Query: 279 NALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK 338
           NALIAGHARKGEGEHVMRLF QMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK
Sbjct: 242 NALIAGHARKGEGEHVMRLFSQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK 301

Query: 339 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQL 398
           SGGQPIAYIGNTLIDMYAKSGSIKDAKKVF+RLVK+DIVSWNSIISGYAQHGLGAEALQL
Sbjct: 302 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFQRLVKRDIVSWNSIISGYAQHGLGAEALQL 361

Query: 399 FEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGR 458
           FEQ+LKAKVQPNEITFLSVLTACSHSGLLDEG+YYFELMKKH IE QVAHHVTVVDLLGR
Sbjct: 362 FEQVLKAKVQPNEITFLSVLTACSHSGLLDEGKYYFELMKKHGIEPQVAHHVTVVDLLGR 421

Query: 459 AGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLL 518
           AGRLNEANKFIEEMP++PTAAVWGALLG+CRMHKNMDLGVYAAE+IFELDPHDSGPHVLL
Sbjct: 422 AGRLNEANKFIEEMPMEPTAAVWGALLGACRMHKNMDLGVYAAEKIFELDPHDSGPHVLL 481

Query: 519 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMW 578
           SNIYASAGRL DA  VRKMMKESGVKKEPACSWVEIENEVH+FVANDDSHPMREEIQRMW
Sbjct: 482 SNIYASAGRLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQRMW 541

Query: 579 EKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 638
           EKISGKIKEIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAFAVLKTPPGLTIRIKKNI
Sbjct: 542 EKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKKNI 601

Query: 639 RICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           RICGDCHSAFKFAS+VLGREIIVRDTNRFHHFLHGMCSCRDYW
Sbjct: 602 RICGDCHSAFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 644

BLAST of Csa1G171070 vs. NCBI nr
Match: gi|645236270|ref|XP_008224655.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Prunus mume])

HSP 1 Score: 930.2 bits (2403), Expect = 2.0e-267
Identity = 451/665 (67.82%), Postives = 550/665 (82.71%), Query Frame = 1

Query: 16  YGRPLALSPSKLKTLSCFLFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRT 75
           Y    A+   KL   +  L  +     C   E   +E +DW       + ++QD+DLLR 
Sbjct: 16  YKNAAAVGIQKLSLSAAQLRTSATRASCTDSEE-ISEGEDWYA-----SHIIQDKDLLRK 75

Query: 76  THISSSGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSST 135
           + + +SGT     GL+VLDL+N GSLE +RTLY+K+LN+CT + +L+Q R +HAHI +S 
Sbjct: 76  S-LHNSGT-----GLHVLDLVNRGSLEADRTLYNKLLNRCTQMGRLQQARIVHAHILTSH 135

Query: 136 FEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFP 195
           F+DDL + N ILNMY KCGSLE+A++LFD+MP KD+V+WT LISGYSQ+ +  +AL LFP
Sbjct: 136 FKDDLPIHNTILNMYVKCGSLEDARNLFDQMPCKDLVTWTALISGYSQNDRPQDALVLFP 195

Query: 196 KMLHLGFQPNEFTLSSLLKASGTGPSDH--HGRQLHAFSLKYGYDMNVHVGSSLLDMYAR 255
           +ML  G +PN+FTLSSL KA+G    D+  HGRQLH + LKYG+D NV+VG+SL+DMYAR
Sbjct: 196 QMLLRGLEPNQFTLSSLFKAAGAVSDDNNEHGRQLHTYCLKYGFDTNVYVGTSLVDMYAR 255

Query: 256 WAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSV 315
           W HM E+++IF+SL  KN VSWNALIAGHARK +GEH +RL  +MLR+GF+PTHFTYSSV
Sbjct: 256 WGHMDESQLIFDSLETKNEVSWNALIAGHARKAQGEHALRLLGKMLREGFKPTHFTYSSV 315

Query: 316 FTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDI 375
           F ACAS+GS+EQGKWVHAH+IKSG + +A++GNTL+DMYAKSGSI+DA+KVF RLV+QDI
Sbjct: 316 FIACASAGSMEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGSIEDARKVFDRLVRQDI 375

Query: 376 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 435
           VSWNS+++GYAQHGLG E +Q FE+ML+  +QPN+ITFL VLTACSH+GLLDEGQYYF+L
Sbjct: 376 VSWNSMLTGYAQHGLGQETVQRFEEMLRIGIQPNDITFLCVLTACSHAGLLDEGQYYFDL 435

Query: 436 MKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDL 495
           MK + IE Q++H+VT+VDLLGRAG L+ A KFI EMPI+PTAAVWGALLG+CRMHKN+DL
Sbjct: 436 MKSYNIEPQISHYVTIVDLLGRAGLLDRAEKFIREMPIEPTAAVWGALLGACRMHKNIDL 495

Query: 496 GVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIEN 555
           G YAAE++FELDPHDSGPHVLLSNIYASAGRLSDAA+VRK+MK+ GVKKEPACSWVEIEN
Sbjct: 496 GAYAAERVFELDPHDSGPHVLLSNIYASAGRLSDAARVRKLMKDCGVKKEPACSWVEIEN 555

Query: 556 EVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEK 615
            VH+FVANDD+HP R EI +MWE ISGKIKEIGYVPDTSHVLFF++QQ+RE+KLQYHSEK
Sbjct: 556 AVHMFVANDDAHPQRVEILQMWETISGKIKEIGYVPDTSHVLFFVDQQEREVKLQYHSEK 615

Query: 616 LALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCS 675
           LALAFA+L T PG TIRIKKNIR+CGDCHSA K+ S+V GREIIVRDTNRFHHF  G CS
Sbjct: 616 LALAFALLNTTPGSTIRIKKNIRVCGDCHSAIKYVSKVEGREIIVRDTNRFHHFRDGSCS 668

Query: 676 CRDYW 679
           CRDYW
Sbjct: 676 CRDYW 668

BLAST of Csa1G171070 vs. NCBI nr
Match: gi|1009111377|ref|XP_015900763.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 921.8 bits (2381), Expect = 7.1e-265
Identity = 445/645 (68.99%), Postives = 539/645 (83.57%), Query Frame = 1

Query: 34  LFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVL 93
           L +  +GT  A    + +ES   D C A  +GV+QD+DLLR ++          TGL+VL
Sbjct: 33  LASCPFGTSAAPALFSDSESGGND-CYA--SGVIQDKDLLRKSY------GGPGTGLHVL 92

Query: 94  DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153
           DLI+ GSLE +R LY+ +L +CT + KL++GR +HAHI +S F+DDLV+ N ILNMYAKC
Sbjct: 93  DLIDRGSLEADRILYNTLLKRCTQMGKLREGRIVHAHILNSQFKDDLVMGNTILNMYAKC 152

Query: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213
           G L++A+ LFD+MP KDMV+WT LI+GYSQ+ Q  +AL LFP+ML  G +PN+FTLSSLL
Sbjct: 153 GGLKDARTLFDEMPVKDMVTWTALITGYSQNDQPEDALVLFPQMLRHGLEPNQFTLSSLL 212

Query: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273
           KASG  P+D +GRQLHA+ LKYG+  NV+VGSSL+DMYAR  HM EA+ IF+ + +KN V
Sbjct: 213 KASGGRPTDKYGRQLHAYCLKYGFVSNVYVGSSLVDMYARCGHMVEAQSIFDDIVSKNEV 272

Query: 274 SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 333
           SWNALIAGHARKGEGEH  RLF +M R+ F+PTHFTYSS+  ACAS+GSLEQGKWVHAH+
Sbjct: 273 SWNALIAGHARKGEGEHAFRLFWKMQREDFKPTHFTYSSILAACASTGSLEQGKWVHAHM 332

Query: 334 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEAL 393
           IKSGG+ +A+ GNTL+ MYAKSGSI+DAKKVF RL+KQD+VSWNSI++GYAQHGL  E L
Sbjct: 333 IKSGGRLVAFAGNTLLYMYAKSGSIEDAKKVFDRLLKQDLVSWNSILTGYAQHGLAKETL 392

Query: 394 QLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLL 453
           Q FE+ML+  ++PN+ITFL VLTACSH+GLLDEGQYY ELMKK+K+E QV+H+VT+VDLL
Sbjct: 393 QQFEEMLRIGIEPNDITFLCVLTACSHAGLLDEGQYYLELMKKYKVEPQVSHYVTIVDLL 452

Query: 454 GRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHV 513
           GRAG L+ A +FI+EMPI+PTAAVWGALLG+CRMHKNM+LG YAAE++FELDPHDSGPH+
Sbjct: 453 GRAGLLDRAERFIKEMPIEPTAAVWGALLGACRMHKNMELGAYAAERVFELDPHDSGPHI 512

Query: 514 LLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQR 573
           LL NIYASAGR  DAAKVRKMMK+SGVKKEPACSWVEIEN VH+FVANDD+HP REEI R
Sbjct: 513 LLYNIYASAGRWDDAAKVRKMMKDSGVKKEPACSWVEIENAVHMFVANDDAHPQREEIHR 572

Query: 574 MWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKK 633
           MWE I  KIK+IGY+PDTSHVL F++QQ+RELKLQYHSEKLALAF++L TPPG +IRIKK
Sbjct: 573 MWENIQSKIKKIGYIPDTSHVLLFVDQQERELKLQYHSEKLALAFSLLNTPPGSSIRIKK 632

Query: 634 NIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 679
           NIR+CGDCHSA K+ S+V+GREII+RDTNRFHHF  G CSC DYW
Sbjct: 633 NIRVCGDCHSAIKYVSKVVGREIILRDTNRFHHFRDGSCSCGDYW 668

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP252_ARATH7.6e-22761.55Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... [more]
PP227_ARATH2.7e-13941.43Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... [more]
PPR32_ARATH3.3e-13742.19Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP307_ARATH1.3e-13340.38Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... [more]
PP224_ARATH2.2e-13339.66Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
M5X1J8_PRUPE5.7e-25373.80Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1[more]
M5X1J8_PRUPE4.5e-1629.05Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1[more]
F6GZB2_VITVI2.2e-24966.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0455g00030 PE=4 SV=... [more]
A0A0D2NHM0_GOSRA4.1e-24367.10Uncharacterized protein OS=Gossypium raimondii GN=B456_002G032400 PE=4 SV=1[more]
A0A067GG88_CITSI3.8e-24170.85Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047067mg PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G24000.12.1e-22261.51 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13770.11.5e-14041.43 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G11290.11.9e-13842.19 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G13650.17.3e-13540.38 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G12770.11.2e-13439.66 mitochondrial editing factor 22[more]
Match NameE-valueIdentityDescription
gi|449443492|ref|XP_004139511.1|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
gi|659128608|ref|XP_008464284.1|0.0e+0093.83PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ... [more]
gi|659128610|ref|XP_008464285.1|0.0e+0094.09PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ... [more]
gi|645236270|ref|XP_008224655.1|2.0e-26767.82PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
gi|1009111377|ref|XP_015900763.1|7.1e-26568.99PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016787 hydrolase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU157180cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G171070.1Csa1G171070.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU157180CU157180transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 448..469
score: 0.64coord: 517..540
score: 0.14coord: 346..371
score: 8.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 169..215
score: 1.1E-10coord: 270..318
score: 1.8E-13coord: 372..419
score: 5.2
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 346..374
score: 8.0E-5coord: 374..408
score: 1.7E-8coord: 273..306
score: 1.8E-7coord: 172..206
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 271..305
score: 12.233coord: 407..441
score: 8.977coord: 139..169
score: 9.328coord: 104..138
score: 5.086coord: 508..542
score: 8.1coord: 442..476
score: 6.489coord: 341..371
score: 7.618coord: 240..270
score: 5.711coord: 306..340
score: 8.561coord: 372..406
score: 12.912coord: 170..204
score: 1
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 148..203
score: 4.3E-11coord: 472..530
score: 4.3E-11coord: 269..403
score: 4.3
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 441..531
score: 2.32E-7coord: 348..406
score: 2.32E-7coord: 106..197
score: 2.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 68..549
score:
NoneNo IPR availablePANTHERPTHR24015:SF897SUBFAMILY NOT NAMEDcoord: 68..549
score: