CmaCh13G003260 (gene) Cucurbita maxima (Rimu)

NameCmaCh13G003260
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCma_Chr13 : 3793592 .. 3795628 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTGCACCAATTTCTCCTTCTTCTCTCCAGAATTTAGTGCTTTCTGATCTTCCTAAACTCAAACCATTCAAATGTTTCTTCTCCGCCGCAAACTACGGCACTGGTTCGCCTCCTTGTTCCTTGACAGAGTCGGATTCGGCGGAAGGCCGAGACTGGAACGCCGCCGCTGCCGCCGTCCCTTTTACCGGTGTCCTCCAAGACGAAGACCTTCTTCGCAAGACCCACATTTCTTCTTCTGAAACTTCCACTAGTTCCACTGGGCTCTATGTTCTGGACCTTATAAATCATGGTAAATTGGAACCCGAACGAACGCTTTATAGTAAAATGCTGAACAAATGTACCCATTTGCGCAAGCTCAAGCTGGGCAGAGTCATCCACTCCCACATCCAGGGCTCTACGTTTGAGAATGATCTGGTAATTCAGAATTCTATCTTAAATATGTACGCCAAATGTGGTAGTCTTGAGGAGGCACACAACCTGTTTGATAAAATGCCTACAAGAGACATGGTTAGTTGGACCGTGTTGATTAGTGGCTATTCTCAGAGTGGGCGAGCGTTTGAAGCTCTTGGTTTGTTCCCTCAGATGTTCCACCAGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCTTGTTGAAGGCTTCTGGAGCTAGCCCTAGTGATGAGCATGGCAGGCAACTTCATGCATTTTCTCTCAAATATGGCTTTAATATGAATGTTCATGTGGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGGGCATATGCAAGAAGCCGAAGCGATTTTTAACGGGCTGGCTGCGAAAAATGTGGTGTCTTGGAATGCTCTGATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAAACTGTTTAGGCAGATGCTTAGGCAGAATTTCGAACCTACGCATTTTACATATTCTAGTGTTTTTACTGCTTGTGCTAGCTCTGGATCTTTCGAGCAAGGCAAATGGGTTCATGCCCATGTTATAAAATCTGGGGGACAACCGGTTGCCTATATTGGAAACACTCTCATTGACATGTATGCCAAATCAGGCAGCATCAAGGATGCAAAGAAGGTCTTCCAGAGGTTGGTTAAACAGGACGTCGTTTCGTGGAACTCGATTATATCTGGATATGCACAACATGGATTGGGAGCTGAAGCTTTACAGCTATTTGAGGAGATGCTAAAGGCCAAAGTTCAACCTAATGAAATTACTTTCCTCTCTGTTCTTACTGCTTGTAGCCATTCAGGGCTTCTAGATGAAGGGCAATATTATTTCGAACTAATGAAGAAATACGAGATCGAACCACAGGTTTCACACCATGTGACAGTCGTTGATCTATTAGGTCGAGCAGGTCGACTTGATGAAGCCAACAAGTTCATAAAGGAAATGCCTATCGAACCTACCGCAGCTGTCTGGGGAGCCTTGCTTGGTGCTTGCAGGATGCATAAGAACATGGATTTGGGTGCTTATGCTGCCGAACGGATTTTCGAGCTTGACCCTCATGACTCAGGTCCTCATGTACTATTGTCTAATATTTATGCTTCTGCTGGTAGATTGAATGATGCAGCTAATGTAAGAAAGATGATGAAAGAGAGTGGAGTTAAGAAAGAACCTGCCTGCAGTTGGGTTGAAATTGAGAACGGAGTTCATATGTTCGTGGCAAATGATGAATCACATCCAATGAGAGAAGAAATCCAGAAGATGTGGGAGAAAATAAGTGGAAAGATTAAAGAGATTGGGTATGTACCAGACACAAGCCATGTGCTTTTCTTCATGGACCAGCAGGACAGAGAAGTAAAGCTGCAATATCATAGTGAGAAGCTAGCATTAGCATTTTCAGTATTGAAAACTCCTCCTGGATTCACCATTAGGATCAAGAAGAACATTAGAATCTGTGGTGACTGCCATTCAGCATTCAAGTTTGCTTCGAAAGTCTTGGGAAGAGAAATCATTGTAAGAGATACCAATAGATTTCATCACTTCCTTGATGGCTTGTGTTCTTGCAGGGACTATTGGTAG

mRNA sequence

ATGAAAATTGCACCAATTTCTCCTTCTTCTCTCCAGAATTTAGTGCTTTCTGATCTTCCTAAACTCAAACCATTCAAATGTTTCTTCTCCGCCGCAAACTACGGCACTGGTTCGCCTCCTTGTTCCTTGACAGAGTCGGATTCGGCGGAAGGCCGAGACTGGAACGCCGCCGCTGCCGCCGTCCCTTTTACCGGTGTCCTCCAAGACGAAGACCTTCTTCGCAAGACCCACATTTCTTCTTCTGAAACTTCCACTAGTTCCACTGGGCTCTATGTTCTGGACCTTATAAATCATGGTAAATTGGAACCCGAACGAACGCTTTATAGTAAAATGCTGAACAAATGTACCCATTTGCGCAAGCTCAAGCTGGGCAGAGTCATCCACTCCCACATCCAGGGCTCTACGTTTGAGAATGATCTGGTAATTCAGAATTCTATCTTAAATATGTACGCCAAATGTGGTAGTCTTGAGGAGGCACACAACCTGTTTGATAAAATGCCTACAAGAGACATGGTTAGTTGGACCGTGTTGATTAGTGGCTATTCTCAGAGTGGGCGAGCGTTTGAAGCTCTTGGTTTGTTCCCTCAGATGTTCCACCAGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCTTGTTGAAGGCTTCTGGAGCTAGCCCTAGTGATGAGCATGGCAGGCAACTTCATGCATTTTCTCTCAAATATGGCTTTAATATGAATGTTCATGTGGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGGGCATATGCAAGAAGCCGAAGCGATTTTTAACGGGCTGGCTGCGAAAAATGTGGTGTCTTGGAATGCTCTGATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAAACTGTTTAGGCAGATGCTTAGGCAGAATTTCGAACCTACGCATTTTACATATTCTAGTGTTTTTACTGCTTGTGCTAGCTCTGGATCTTTCGAGCAAGGCAAATGGGTTCATGCCCATGTTATAAAATCTGGGGGACAACCGGTTGCCTATATTGGAAACACTCTCATTGACATGTATGCCAAATCAGGCAGCATCAAGGATGCAAAGAAGGTCTTCCAGAGGTTGGTTAAACAGGACGTCGTTTCGTGGAACTCGATTATATCTGGATATGCACAACATGGATTGGGAGCTGAAGCTTTACAGCTATTTGAGGAGATGCTAAAGGCCAAAGTTCAACCTAATGAAATTACTTTCCTCTCTGTTCTTACTGCTTGTAGCCATTCAGGGCTTCTAGATGAAGGGCAATATTATTTCGAACTAATGAAGAAATACGAGATCGAACCACAGGTTTCACACCATGTGACAGTCGTTGATCTATTAGGTCGAGCAGGTCGACTTGATGAAGCCAACAAGTTCATAAAGGAAATGCCTATCGAACCTACCGCAGCTGTCTGGGGAGCCTTGCTTGGTGCTTGCAGGATGCATAAGAACATGGATTTGGGTGCTTATGCTGCCGAACGGATTTTCGAGCTTGACCCTCATGACTCAGGTCCTCATGTACTATTGTCTAATATTTATGCTTCTGCTGGTAGATTGAATGATGCAGCTAATGTAAGAAAGATGATGAAAGAGAGTGGAGTTAAGAAAGAACCTGCCTGCAGTTGGGTTGAAATTGAGAACGGAGTTCATATGTTCGTGGCAAATGATGAATCACATCCAATGAGAGAAGAAATCCAGAAGATGTGGGAGAAAATAAGTGGAAAGATTAAAGAGATTGGGTATGTACCAGACACAAGCCATGTGCTTTTCTTCATGGACCAGCAGGACAGAGAAGTAAAGCTGCAATATCATAGTGAGAAGCTAGCATTAGCATTTTCAGTATTGAAAACTCCTCCTGGATTCACCATTAGGATCAAGAAGAACATTAGAATCTGTGGTGACTGCCATTCAGCATTCAAGTTTGCTTCGAAAGTCTTGGGAAGAGAAATCATTGTAAGAGATACCAATAGATTTCATCACTTCCTTGATGGCTTGTGTTCTTGCAGGGACTATTGGTAG

Coding sequence (CDS)

ATGAAAATTGCACCAATTTCTCCTTCTTCTCTCCAGAATTTAGTGCTTTCTGATCTTCCTAAACTCAAACCATTCAAATGTTTCTTCTCCGCCGCAAACTACGGCACTGGTTCGCCTCCTTGTTCCTTGACAGAGTCGGATTCGGCGGAAGGCCGAGACTGGAACGCCGCCGCTGCCGCCGTCCCTTTTACCGGTGTCCTCCAAGACGAAGACCTTCTTCGCAAGACCCACATTTCTTCTTCTGAAACTTCCACTAGTTCCACTGGGCTCTATGTTCTGGACCTTATAAATCATGGTAAATTGGAACCCGAACGAACGCTTTATAGTAAAATGCTGAACAAATGTACCCATTTGCGCAAGCTCAAGCTGGGCAGAGTCATCCACTCCCACATCCAGGGCTCTACGTTTGAGAATGATCTGGTAATTCAGAATTCTATCTTAAATATGTACGCCAAATGTGGTAGTCTTGAGGAGGCACACAACCTGTTTGATAAAATGCCTACAAGAGACATGGTTAGTTGGACCGTGTTGATTAGTGGCTATTCTCAGAGTGGGCGAGCGTTTGAAGCTCTTGGTTTGTTCCCTCAGATGTTCCACCAGGGCTTCCAACCCAATGAGTTCACTTTGTCTAGCTTGTTGAAGGCTTCTGGAGCTAGCCCTAGTGATGAGCATGGCAGGCAACTTCATGCATTTTCTCTCAAATATGGCTTTAATATGAATGTTCATGTGGGAAGTTCATTGCTCGATATGTATGCTAGGTGGGGGCATATGCAAGAAGCCGAAGCGATTTTTAACGGGCTGGCTGCGAAAAATGTGGTGTCTTGGAATGCTCTGATTGCTGGTCATGCTCGGAAGGGTGAAGGGGAGCATGTGATGAAACTGTTTAGGCAGATGCTTAGGCAGAATTTCGAACCTACGCATTTTACATATTCTAGTGTTTTTACTGCTTGTGCTAGCTCTGGATCTTTCGAGCAAGGCAAATGGGTTCATGCCCATGTTATAAAATCTGGGGGACAACCGGTTGCCTATATTGGAAACACTCTCATTGACATGTATGCCAAATCAGGCAGCATCAAGGATGCAAAGAAGGTCTTCCAGAGGTTGGTTAAACAGGACGTCGTTTCGTGGAACTCGATTATATCTGGATATGCACAACATGGATTGGGAGCTGAAGCTTTACAGCTATTTGAGGAGATGCTAAAGGCCAAAGTTCAACCTAATGAAATTACTTTCCTCTCTGTTCTTACTGCTTGTAGCCATTCAGGGCTTCTAGATGAAGGGCAATATTATTTCGAACTAATGAAGAAATACGAGATCGAACCACAGGTTTCACACCATGTGACAGTCGTTGATCTATTAGGTCGAGCAGGTCGACTTGATGAAGCCAACAAGTTCATAAAGGAAATGCCTATCGAACCTACCGCAGCTGTCTGGGGAGCCTTGCTTGGTGCTTGCAGGATGCATAAGAACATGGATTTGGGTGCTTATGCTGCCGAACGGATTTTCGAGCTTGACCCTCATGACTCAGGTCCTCATGTACTATTGTCTAATATTTATGCTTCTGCTGGTAGATTGAATGATGCAGCTAATGTAAGAAAGATGATGAAAGAGAGTGGAGTTAAGAAAGAACCTGCCTGCAGTTGGGTTGAAATTGAGAACGGAGTTCATATGTTCGTGGCAAATGATGAATCACATCCAATGAGAGAAGAAATCCAGAAGATGTGGGAGAAAATAAGTGGAAAGATTAAAGAGATTGGGTATGTACCAGACACAAGCCATGTGCTTTTCTTCATGGACCAGCAGGACAGAGAAGTAAAGCTGCAATATCATAGTGAGAAGCTAGCATTAGCATTTTCAGTATTGAAAACTCCTCCTGGATTCACCATTAGGATCAAGAAGAACATTAGAATCTGTGGTGACTGCCATTCAGCATTCAAGTTTGCTTCGAAAGTCTTGGGAAGAGAAATCATTGTAAGAGATACCAATAGATTTCATCACTTCCTTGATGGCTTGTGTTCTTGCAGGGACTATTGGTAG

Protein sequence

MKIAPISPSSLQNLVLSDLPKLKPFKCFFSAANYGTGSPPCSLTESDSAEGRDWNAAAAAVPFTGVLQDEDLLRKTHISSSETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW
BLAST of CmaCh13G003260 vs. Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 811.6 bits (2095), Expect = 6.5e-234
Identity = 380/575 (66.09%), Postives = 463/575 (80.52%), Query Frame = 1

Query: 104 ERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLF 163
           +R  Y+ +L KCT  + L  GR++H+HI  S F +D+V+ N++LNMYAKCGSLEEA  +F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 164 DKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDE 223
           +KMP RD V+WT LISGYSQ  R  +AL  F QM   G+ PNEFTLSS++KA+ A     
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 224 HGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHA 283
            G QLH F +K GF+ NVHVGS+LLD+Y R+G M +A+ +F+ L ++N VSWNALIAGHA
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238

Query: 284 RKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAY 343
           R+   E  ++LF+ MLR  F P+HF+Y+S+F AC+S+G  EQGKWVHA++IKSG + VA+
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298

Query: 344 IGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAK 403
            GNTL+DMYAKSGSI DA+K+F RL K+DVVSWNS+++ YAQHG G EA+  FEEM +  
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358

Query: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAGRLDEAN 463
           ++PNEI+FLSVLTACSHSGLLDEG +Y+ELMKK  I P+  H+VTVVDLLGRAG L+ A 
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418

Query: 464 KFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAG 523
           +FI+EMPIEPTAA+W ALL ACRMHKN +LGAYAAE +FELDP D GPHV+L NIYAS G
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478

Query: 524 RLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIK 583
           R NDAA VRK MKESGVKKEPACSWVEIEN +HMFVANDE HP REEI + WE++  KIK
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538

Query: 584 EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHS 643
           E+GYVPDTSHV+  +DQQ+REV LQYHSEK+ALAF++L TPPG TI IKKNIR+CGDCH+
Sbjct: 539 ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598

Query: 644 AFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           A K ASKV+GREIIVRDTNRFHHF DG CSC+DYW
Sbjct: 599 AIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

BLAST of CmaCh13G003260 vs. Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 3.6e-144
Identity = 259/626 (41.37%), Postives = 395/626 (63.10%), Query Frame = 1

Query: 71  DLLRKTHISSSETSTS---STGLYVLDLINHGKLE----------PERTL--YSKMLNKC 130
           +L+R  H S S + T+    T L +  L ++G+L+          PE     Y  +LN C
Sbjct: 3   NLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNAC 62

Query: 131 THLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWT 190
              R L+ G+ +H+H+  + +     ++  +L  Y KC  LE+A  + D+MP +++VSWT
Sbjct: 63  LDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122

Query: 191 VLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKY 250
            +IS YSQ+G + EAL +F +M     +PNEFT +++L +   +     G+Q+H   +K+
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182

Query: 251 GFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLF 310
            ++ ++ VGSSLLDMYA+ G ++EA  IF  L  ++VVS  A+IAG+A+ G  E  +++F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242

Query: 311 RQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKS 370
            ++  +   P + TY+S+ TA +     + GK  H HV++      A + N+LIDMY+K 
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302

Query: 371 GSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAK-VQPNEITFLSV 430
           G++  A+++F  + ++  +SWN+++ GY++HGLG E L+LF  M   K V+P+ +T L+V
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362

Query: 431 LTACSHSGLLDEGQYYFELMK--KYEIEPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIE 490
           L+ CSH  + D G   F+ M   +Y  +P   H+  +VD+LGRAGR+DEA +FIK MP +
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422

Query: 491 PTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVR 550
           PTA V G+LLGACR+H ++D+G     R+ E++P ++G +V+LSN+YASAGR  D  NVR
Sbjct: 423 PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVR 482

Query: 551 KMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIKEIGYVPDTS 610
            MM +  V KEP  SW++ E  +H F AND +HP REE+    ++IS K+K+ GYVPD S
Sbjct: 483 AMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLS 542

Query: 611 HVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVL 670
            VL+ +D++ +E  L  HSEKLAL F ++ T  G  IR+ KN+RIC DCH+  K  SKV 
Sbjct: 543 CVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVF 602

Query: 671 GREIIVRDTNRFHHFLDGLCSCRDYW 679
            RE+ +RD NRFH  +DG+CSC DYW
Sbjct: 603 EREVSLRDKNRFHQIVDGICSCGDYW 628

BLAST of CmaCh13G003260 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 8.4e-141
Identity = 253/599 (42.24%), Postives = 367/599 (61.27%), Query Frame = 1

Query: 81  SETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDL 140
           S+   +   L ++  +    L+P       +L   + LR + +G+ IH +   S F++ +
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271

Query: 141 VIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQ 200
            I  ++++MYAKCGSLE A  LFD M  R++VSW  +I  Y Q+    EA+ +F +M  +
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331

Query: 201 GFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEA 260
           G +P + ++   L A       E GR +H  S++ G + NV V +SL+ MY +   +  A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391

Query: 261 EAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASS 320
            ++F  L ++ +VSWNA+I G A+ G     +  F QM  +  +P  FTY SV TA A  
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451

Query: 321 GSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSII 380
                 KW+H  V++S      ++   L+DMYAK G+I  A+ +F  + ++ V +WN++I
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511

Query: 381 SGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-YEI 440
            GY  HG G  AL+LFEEM K  ++PN +TFLSV++ACSHSGL++ G   F +MK+ Y I
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571

Query: 441 EPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAE 500
           E  + H+  +VDLLGRAGRL+EA  FI +MP++P   V+GA+LGAC++HKN++    AAE
Sbjct: 572 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAE 631

Query: 501 RIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFV 560
           R+FEL+P D G HVLL+NIY +A        VR  M   G++K P CS VEI+N VH F 
Sbjct: 632 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 691

Query: 561 ANDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFS 620
           +   +HP  ++I    EK+   IKE GYVPDT+ VL  ++   +E  L  HSEKLA++F 
Sbjct: 692 SGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFG 751

Query: 621 VLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           +L T  G TI ++KN+R+C DCH+A K+ S V GREI+VRD  RFHHF +G CSC DYW
Sbjct: 752 LLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of CmaCh13G003260 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 2.4e-140
Identity = 233/581 (40.10%), Postives = 369/581 (63.51%), Query Frame = 1

Query: 100 KLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEA 159
           ++ P+   +  +L  C+ L  L++GR +H+ +    F+ D+ +QN ++ +YAKC  L  A
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173

Query: 160 HNLFD--KMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASG 219
             +F+   +P R +VSWT ++S Y+Q+G   EAL +F QM     +P+   L S+L A  
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233

Query: 220 ASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNA 279
                + GR +HA  +K G  +   +  SL  MYA+ G +  A+ +F+ + + N++ WNA
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293

Query: 280 LIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSG 339
           +I+G+A+ G     + +F +M+ ++  P   + +S  +ACA  GS EQ + ++ +V +S 
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353

Query: 340 GQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFE 399
            +   +I + LIDM+AK GS++ A+ VF R + +DVV W+++I GY  HG   EA+ L+ 
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413

Query: 400 EMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAG 459
            M +  V PN++TFL +L AC+HSG++ EG ++F  M  ++I PQ  H+  V+DLLGRAG
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAG 473

Query: 460 RLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSN 519
            LD+A + IK MP++P   VWGALL AC+ H++++LG YAA+++F +DP ++G +V LSN
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSN 533

Query: 520 IYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEK 579
           +YA+A   +  A VR  MKE G+ K+  CSWVE+   +  F   D+SHP  EEI++  E 
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEW 593

Query: 580 ISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRI 639
           I  ++KE G+V +    L  ++ ++ E  L  HSE++A+A+ ++ TP G  +RI KN+R 
Sbjct: 594 IESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRA 653

Query: 640 CGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           C +CH+A K  SK++ REI+VRDTNRFHHF DG+CSC DYW
Sbjct: 654 CVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

BLAST of CmaCh13G003260 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 495.7 bits (1275), Expect = 7.8e-139
Identity = 235/580 (40.52%), Postives = 368/580 (63.45%), Query Frame = 1

Query: 100  KLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEA 159
            ++ P +  Y  +L  C  L  L+LG  IHS I  + F+ +  + + +++MYAK G L+ A
Sbjct: 485  EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544

Query: 160  HNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGAS 219
             ++  +   +D+VSWT +I+GY+Q     +AL  F QM  +G + +E  L++ + A    
Sbjct: 545  WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604

Query: 220  PSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALI 279
             + + G+Q+HA +   GF+ ++   ++L+ +Y+R G ++E+   F    A + ++WNAL+
Sbjct: 605  QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664

Query: 280  AGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQ 339
            +G  + G  E  +++F +M R+  +  +FT+ S   A + + + +QGK VHA + K+G  
Sbjct: 665  SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724

Query: 340  PVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEM 399
                + N LI MYAK GSI DA+K F  +  ++ VSWN+II+ Y++HG G+EAL  F++M
Sbjct: 725  SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784

Query: 400  LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KYEIEPQVSHHVTVVDLLGRAGR 459
            + + V+PN +T + VL+ACSH GL+D+G  YFE M  +Y + P+  H+V VVD+L RAG 
Sbjct: 785  IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGL 844

Query: 460  LDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNI 519
            L  A +FI+EMPI+P A VW  LL AC +HKNM++G +AA  + EL+P DS  +VLLSN+
Sbjct: 845  LSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNL 904

Query: 520  YASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKI 579
            YA + + +     R+ MKE GVKKEP  SW+E++N +H F   D++HP+ +EI + ++ +
Sbjct: 905  YAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 964

Query: 580  SGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRIC 639
            + +  EIGYV D   +L  +  + ++  +  HSEKLA++F +L  P    I + KN+R+C
Sbjct: 965  TKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVC 1024

Query: 640  GDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
             DCH+  KF SKV  REIIVRD  RFHHF  G CSC+DYW
Sbjct: 1025 NDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

BLAST of CmaCh13G003260 vs. TrEMBL
Match: A0A0A0LSV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G171070 PE=4 SV=1)

HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 571/658 (86.78%), Postives = 612/658 (93.01%), Query Frame = 1

Query: 21  KLKPFKCFFSAANYGTGSPPCSLTESDSAEGRDWNAAAAAVPFTGVLQDEDLLRKTHISS 80
           KLK   CF  AA YGT   PC+  ES++AE +DW+   A  PFTGVLQDEDLLR THISS
Sbjct: 26  KLKTLSCFLFAAKYGT---PCAFVESNTAESQDWDPCTA--PFTGVLQDEDLLRTTHISS 85

Query: 81  SETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDL 140
           S TS++STGLYVLDLIN G LEPERTLYSKMLNKCT+LRKLK GR IH+HIQ STFE+DL
Sbjct: 86  SGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDL 145

Query: 141 VIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQ 200
           V+ N ILNMYAKCGSLEEA +LFDKMPT+DMVSWTVLISGYSQSG+A EAL LFP+M H 
Sbjct: 146 VLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHL 205

Query: 201 GFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEA 260
           GFQPNEFTLSSLLKASG  PSD HGRQLHAFSLKYG++MNVHVGSSLLDMYARW HM+EA
Sbjct: 206 GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 265

Query: 261 EAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASS 320
           + IFN LAAKNVVSWNALIAGHARKGEGEHVM+LF QMLRQ FEPTHFTYSSVFTACASS
Sbjct: 266 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 325

Query: 321 GSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSII 380
           GS EQGKWVHAHVIKSGGQP+AYIGNTLIDMYAKSGSIKDAKKVF+RLVKQD+VSWNSII
Sbjct: 326 GSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSII 385

Query: 381 SGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIE 440
           SGYAQHGLGAEALQLFE+MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK++IE
Sbjct: 386 SGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIE 445

Query: 441 PQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAER 500
            QV+HHVTVVDLLGRAGRL+EANKFI+EMPI+PTAAVWGALLG+CRMHKNMDLG YAAE+
Sbjct: 446 AQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQ 505

Query: 501 IFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVA 560
           IFELDPHDSGPHVLLSNIYASAGRL+DAA VRKMMKESGVKKEPACSWVEIEN VH+FVA
Sbjct: 506 IFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 565

Query: 561 NDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSV 620
           ND+SHPMREEIQ+MWEKISGKIKEIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAF+V
Sbjct: 566 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV 625

Query: 621 LKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           LKTPPG TIRIKKNIRICGDCHSAFKFAS+VLGREIIVRDTNRFHHFL G+CSCRDYW
Sbjct: 626 LKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678

BLAST of CmaCh13G003260 vs. TrEMBL
Match: A0A061GGP7_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_030473 PE=4 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 9.6e-261
Identity = 433/617 (70.18%), Postives = 510/617 (82.66%), Query Frame = 1

Query: 66  VLQDEDLLRKTHISSSETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGR 125
           +++D+DLL+K+         S TGL+VLDL++ G LEP R LY  +L KCT LRK KLG+
Sbjct: 65  IIEDKDLLQKS------LHPSGTGLHVLDLLDQGSLEPHRALYHLLLKKCTRLRKPKLGK 124

Query: 126 VIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSG 185
           ++H+HI  S F +DLVI NS+LNMYAKCG L++A NLFD+MP +DMVSWT LI+ YSQ G
Sbjct: 125 IVHAHILNSLFRHDLVILNSLLNMYAKCGCLDDARNLFDQMPVKDMVSWTTLITAYSQHG 184

Query: 186 RAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDEH----GRQLHAFSLKYGFNMNV 245
           R F A+ LFP M   GF PN+FTLSSLLKAS A P   H    G QLHAF  K G + NV
Sbjct: 185 RPFHAILLFPHMLSLGFFPNQFTLSSLLKASAALPDTPHIHFHGTQLHAFCFKCGLHSNV 244

Query: 246 HVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQ 305
           +VGSSLLDMYAR G M EA  IF+ L +KN VSWNALIAGHARKG+ +H + LFR+MLRQ
Sbjct: 245 YVGSSLLDMYARCGCMDEARLIFDALHSKNEVSWNALIAGHARKGQADHALWLFRKMLRQ 304

Query: 306 NFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDA 365
           +F+PTHFT+ S+  ACAS+GS EQGKWVHAHVIKSGG+ VA++GNTL+ MYAKSGSI+DA
Sbjct: 305 DFQPTHFTFCSILGACASTGSLEQGKWVHAHVIKSGGEIVAFMGNTLLHMYAKSGSIQDA 364

Query: 366 KKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHS 425
           K +F RLVK DVVSWNS+++ YAQHGLG EA+Q F+EML+  V PN+ITFL +LTACS +
Sbjct: 365 KMIFDRLVKSDVVSWNSMLTAYAQHGLGKEAVQWFQEMLRIGVGPNDITFLCLLTACSRA 424

Query: 426 GLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGAL 485
           GLLD+GQYYF+LM  Y IEPQ+SH+VT+VDL GRAG LD+A +FI+EMPI+PTAAVWGAL
Sbjct: 425 GLLDQGQYYFKLMSNYNIEPQISHYVTIVDLFGRAGLLDKAERFIREMPIKPTAAVWGAL 484

Query: 486 LGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVK 545
           LGACRMHKNM+LG YAAER+FELDPHDSGP VLLSNIYASAGR +DAA VRKMMKESGVK
Sbjct: 485 LGACRMHKNMELGTYAAERVFELDPHDSGPLVLLSNIYASAGRWSDAAKVRKMMKESGVK 544

Query: 546 KEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQ 605
           KEPACSWVEIEN VH+FVAND++HP  EEI KMWE+IS +IKEIGYVPD SHVLF+MDQQ
Sbjct: 545 KEPACSWVEIENTVHVFVANDDAHPQMEEIHKMWEEISARIKEIGYVPDISHVLFYMDQQ 604

Query: 606 DREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDT 665
           +RE+KLQYHSEKLALAF++L + PG TIRIKKNIR+CGDCHSA KF S+V+ REIIVRDT
Sbjct: 605 EREIKLQYHSEKLALAFALLNSSPGSTIRIKKNIRVCGDCHSAIKFVSQVVRREIIVRDT 664

Query: 666 NRFHHFLDGLCSCRDYW 679
           NRFHHF  G CSC DYW
Sbjct: 665 NRFHHFRGGSCSCGDYW 675

BLAST of CmaCh13G003260 vs. TrEMBL
Match: M5X1J8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1)

HSP 1 Score: 903.3 bits (2333), Expect = 1.8e-259
Identity = 421/561 (75.04%), Postives = 494/561 (88.06%), Query Frame = 1

Query: 120 KLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLIS 179
           +L+  R++H+HI  S F++DL I N+ILNMY KCGSLE+A NLFD+MP++D+V+WT LIS
Sbjct: 3   RLQQARIVHAHILTSHFKDDLPIHNTILNMYVKCGSLEDARNLFDQMPSKDLVTWTALIS 62

Query: 180 GYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSD--EHGRQLHAFSLKYGF 239
           GYSQ  R  +AL LFPQM  +G +PN+FTLSSL KA+GA   D  +HGRQLHA+ LKYGF
Sbjct: 63  GYSQYDRPQDALVLFPQMLLRGLEPNQFTLSSLFKAAGAVSDDNNKHGRQLHAYCLKYGF 122

Query: 240 NMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQ 299
           + NV+VG+SL+DMYARWGHM E++ IF+ L  KN VSWNALIAGHARK +GEH ++LF +
Sbjct: 123 DTNVYVGTSLVDMYARWGHMDESQLIFDSLETKNEVSWNALIAGHARKAQGEHALRLFWK 182

Query: 300 MLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGS 359
           MLR+ F+PTHFTYSSVFTACAS+GS EQGKWVHAH+IKSG + VA++GNTL+DMYAKSGS
Sbjct: 183 MLREGFKPTHFTYSSVFTACASAGSMEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGS 242

Query: 360 IKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTA 419
           I+DA+KVF RLV+QD+VSWNS+++GYAQHGLG E +Q FEEML+  +QPN+ITFL VLTA
Sbjct: 243 IEDARKVFDRLVRQDIVSWNSMLTGYAQHGLGQETVQRFEEMLRIGIQPNDITFLCVLTA 302

Query: 420 CSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAV 479
           CSH+GLLDEGQYYF+LMK Y IE Q+SH+VT+VDLLGRAG LD A KFI+EMPIEPTAAV
Sbjct: 303 CSHAGLLDEGQYYFDLMKSYNIELQISHYVTIVDLLGRAGLLDRAAKFIREMPIEPTAAV 362

Query: 480 WGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKE 539
           WGALLGACRMHKN+DLGAYAAER+FELDPHDSGPHVLLSNIYASAGRL+DAA VRK+MK+
Sbjct: 363 WGALLGACRMHKNIDLGAYAAERVFELDPHDSGPHVLLSNIYASAGRLSDAARVRKLMKD 422

Query: 540 SGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFF 599
            GVKKEPACSWVEIEN VHMFVAND++HP R EI +MWE ISGKIK+IGYVPDTSHVLFF
Sbjct: 423 CGVKKEPACSWVEIENAVHMFVANDDAHPQRVEILQMWETISGKIKDIGYVPDTSHVLFF 482

Query: 600 MDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREII 659
           +DQQ+REVKLQYHSEKLALAF++L T PG TIRIKKNIR+CGDCHSA K+ SKV GREII
Sbjct: 483 VDQQEREVKLQYHSEKLALAFALLNTTPGSTIRIKKNIRVCGDCHSAIKYVSKVEGREII 542

Query: 660 VRDTNRFHHFLDGLCSCRDYW 679
           VRDTNRFHHF +G CSCRDYW
Sbjct: 543 VRDTNRFHHFRNGSCSCRDYW 563

BLAST of CmaCh13G003260 vs. TrEMBL
Match: F6GZB2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0455g00030 PE=4 SV=1)

HSP 1 Score: 894.4 bits (2310), Expect = 8.4e-257
Identity = 431/642 (67.13%), Postives = 516/642 (80.37%), Query Frame = 1

Query: 38  SPPCSLTESDSAEGRDWNAAAAAVPFTGVLQDEDLLRKTHISSSETSTSSTGLYVLDLIN 97
           +P    ++S+ +E  D +AA+  V      QD+DLLRK+       S   TGLY LDLI 
Sbjct: 31  APAAPFSDSNDSEVEDGDAASFCV-----FQDKDLLRKSQ------SDGGTGLYALDLIQ 90

Query: 98  HGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTF-ENDLVIQNSILNMYAKCGSL 157
            G L P+  LYSK+L +CT L K++ GR++H+H+  S F +N LV+QN I+NMYAKCG L
Sbjct: 91  RGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCL 150

Query: 158 EEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKAS 217
           ++A  +FD+MPT+DMV+WT LI+G+SQ+ R  +AL LFPQM   GFQPN FTLSSLLKAS
Sbjct: 151 DDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKAS 210

Query: 218 GASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWN 277
           G+    + G QLHAF LKYG+  +V+VGS+L+DMYAR GHM  A+  F+G+  K+ VSWN
Sbjct: 211 GSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWN 270

Query: 278 ALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKS 337
           ALI+GHARKGEGEH + L  +M R+NF+PTHFTYSSV +ACAS G+ EQGKWVHAH+IKS
Sbjct: 271 ALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKS 330

Query: 338 GGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLF 397
           G + +A+IGNTL+DMYAK+GSI DAK+VF RLVK DVVSWN++++G AQHGLG E L  F
Sbjct: 331 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 390

Query: 398 EEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRA 457
           E+ML+  ++PNEI+FL VLTACSHSGLLDEG YYFELMKKY++EP V H+VT VDLLGR 
Sbjct: 391 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRV 450

Query: 458 GRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLS 517
           G LD A +FI+EMPIEPTAAVWGALLGACRMHKNM+LG YAAER FELDPHDSGP +LLS
Sbjct: 451 GLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLS 510

Query: 518 NIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWE 577
           NIYASAGR  D A VRKMMKESGVKK+PACSWVEIEN VH+FVANDE+HP  +EI+  WE
Sbjct: 511 NIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWE 570

Query: 578 KISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIR 637
           +ISGKIKEIGYVPDTSHVL F+DQQ+RE KLQYHSEKLALAF++L TP G  IRIKKNIR
Sbjct: 571 EISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIR 630

Query: 638 ICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           +CGDCH+A KF SKV+ REIIVRDTNRFH F DG CSC DYW
Sbjct: 631 VCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGSCSCGDYW 661

BLAST of CmaCh13G003260 vs. TrEMBL
Match: A0A0D2NHM0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G032400 PE=4 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 2.8e-252
Identity = 419/617 (67.91%), Postives = 505/617 (81.85%), Query Frame = 1

Query: 66  VLQDEDLLRKTHISSSETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGR 125
           ++QD+DLL K+       + S TGL+VLDL++ G LEP  TLY  +L KCT LRK KLG+
Sbjct: 48  IVQDKDLLLKS------LNPSGTGLHVLDLVDEGSLEPHPTLYHLLLKKCTFLRKPKLGK 107

Query: 126 VIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSG 185
           ++H+HI  S F  D+VI N++LNMYAKCG L++A NLFD+M  +DMV+WT LI+ YSQ  
Sbjct: 108 IVHAHISNSHFRGDVVILNTLLNMYAKCGCLDDARNLFDEMSVKDMVTWTTLITAYSQHD 167

Query: 186 RAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDE----HGRQLHAFSLKYGFNMNV 245
           R  +AL LFPQM   GF PNEFTLSSLLKAS A         HG QLH FS K GF+ NV
Sbjct: 168 RPLDALLLFPQMLSLGFFPNEFTLSSLLKASAALSDTPQIYFHGAQLHGFSFKCGFHSNV 227

Query: 246 HVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQ 305
           +VGSSLLDMYAR G M EA  +F+ L  KN VSWNALIA HARKG+ +  + LF +MLRQ
Sbjct: 228 YVGSSLLDMYARCGCMDEAHFVFDVLPTKNEVSWNALIADHARKGQLDRALSLFLKMLRQ 287

Query: 306 NFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDA 365
           +F+PTHFT+SS+F ACAS+GS EQGKWVHAHVIKSGG+ +A++GNTL+ MYAKSGSI+DA
Sbjct: 288 DFQPTHFTFSSIFGACASTGSLEQGKWVHAHVIKSGGEIIAFMGNTLLHMYAKSGSIQDA 347

Query: 366 KKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHS 425
           K +F RLVK+D+VSWNS+++ YAQHGLG EA+Q F++ML   + PN+ITFL +LTACS +
Sbjct: 348 KMIFDRLVKRDLVSWNSMLTAYAQHGLGKEAVQCFQKMLNIGLVPNDITFLCLLTACSRA 407

Query: 426 GLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGAL 485
           GLL+EGQYYF+ M +Y IEP +SH+VT+VDLLGRAG L+EA +FI EMPI+PTAAVWGAL
Sbjct: 408 GLLEEGQYYFKSMNRYNIEPGISHYVTIVDLLGRAGLLNEALRFINEMPIQPTAAVWGAL 467

Query: 486 LGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVK 545
           LGACRMHKN+++G++AAER+FELDPHDSGPHVLLSNIYAS  R  DAA VRK+MKESGVK
Sbjct: 468 LGACRMHKNVEMGSFAAERVFELDPHDSGPHVLLSNIYASGNRWRDAAKVRKLMKESGVK 527

Query: 546 KEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQ 605
           KEPACSWVEI+N VHMFVA+D+SHP    I K WE+IS +IKEIGYVPDTSHVLF+MD+Q
Sbjct: 528 KEPACSWVEIQNTVHMFVASDDSHPQMGAIYKKWEEISARIKEIGYVPDTSHVLFYMDEQ 587

Query: 606 DREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDT 665
           +REVKLQYHSEKLALAF++L +P G TIRIKKNIR+CGDCHSAFKF SKV+GREIIVRDT
Sbjct: 588 EREVKLQYHSEKLALAFALLNSPDGSTIRIKKNIRVCGDCHSAFKFVSKVVGREIIVRDT 647

Query: 666 NRFHHFLDGLCSCRDYW 679
           NRFHHF DG CSC ++W
Sbjct: 648 NRFHHFYDGSCSCGNFW 658

BLAST of CmaCh13G003260 vs. TAIR10
Match: AT3G24000.1 (AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 791.2 bits (2042), Expect = 5.1e-229
Identity = 373/566 (65.90%), Postives = 455/566 (80.39%), Query Frame = 1

Query: 104 ERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLF 163
           +R  Y+ +L KCT  + L  GR++H+HI  S F +D+V+ N++LNMYAKCGSLEEA  +F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 164 DKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDE 223
           +KMP RD V+WT LISGYSQ  R  +AL  F QM   G+ PNEFTLSS++KA+ A     
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 224 HGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHA 283
            G QLH F +K GF+ NVHVGS+LLD+Y R+G M +A+ +F+ L ++N VSWNALIAGHA
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238

Query: 284 RKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAY 343
           R+   E  ++LF+ MLR  F P+HF+Y+S+F AC+S+G  EQGKWVHA++IKSG + VA+
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298

Query: 344 IGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAK 403
            GNTL+DMYAKSGSI DA+K+F RL K+DVVSWNS+++ YAQHG G EA+  FEEM +  
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358

Query: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAGRLDEAN 463
           ++PNEI+FLSVLTACSHSGLLDEG +Y+ELMKK  I P+  H+VTVVDLLGRAG L+ A 
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418

Query: 464 KFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAG 523
           +FI+EMPIEPTAA+W ALL ACRMHKN +LGAYAAE +FELDP D GPHV+L NIYAS G
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478

Query: 524 RLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIK 583
           R NDAA VRK MKESGVKKEPACSWVEIEN +HMFVANDE HP REEI + WE++  KIK
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIK 538

Query: 584 EIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHS 643
           E+GYVPDTSHV+  +DQQ+REV LQYHSEK+ALAF++L TPPG TI IKKNIR+CGDCH+
Sbjct: 539 ELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHT 598

Query: 644 AFKFASKVLGREIIVRDTNRFHHFLD 670
           A K ASKV+GREIIVRDTNRFHHF D
Sbjct: 599 AIKLASKVVGREIIVRDTNRFHHFKD 624

BLAST of CmaCh13G003260 vs. TAIR10
Match: AT3G13770.1 (AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 513.5 bits (1321), Expect = 2.0e-145
Identity = 259/626 (41.37%), Postives = 395/626 (63.10%), Query Frame = 1

Query: 71  DLLRKTHISSSETSTS---STGLYVLDLINHGKLE----------PERTL--YSKMLNKC 130
           +L+R  H S S + T+    T L +  L ++G+L+          PE     Y  +LN C
Sbjct: 3   NLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNAC 62

Query: 131 THLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWT 190
              R L+ G+ +H+H+  + +     ++  +L  Y KC  LE+A  + D+MP +++VSWT
Sbjct: 63  LDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122

Query: 191 VLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKY 250
            +IS YSQ+G + EAL +F +M     +PNEFT +++L +   +     G+Q+H   +K+
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182

Query: 251 GFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLF 310
            ++ ++ VGSSLLDMYA+ G ++EA  IF  L  ++VVS  A+IAG+A+ G  E  +++F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242

Query: 311 RQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKS 370
            ++  +   P + TY+S+ TA +     + GK  H HV++      A + N+LIDMY+K 
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302

Query: 371 GSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAK-VQPNEITFLSV 430
           G++  A+++F  + ++  +SWN+++ GY++HGLG E L+LF  M   K V+P+ +T L+V
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362

Query: 431 LTACSHSGLLDEGQYYFELMK--KYEIEPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIE 490
           L+ CSH  + D G   F+ M   +Y  +P   H+  +VD+LGRAGR+DEA +FIK MP +
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422

Query: 491 PTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVR 550
           PTA V G+LLGACR+H ++D+G     R+ E++P ++G +V+LSN+YASAGR  D  NVR
Sbjct: 423 PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVR 482

Query: 551 KMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIKEIGYVPDTS 610
            MM +  V KEP  SW++ E  +H F AND +HP REE+    ++IS K+K+ GYVPD S
Sbjct: 483 AMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLS 542

Query: 611 HVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVL 670
            VL+ +D++ +E  L  HSEKLAL F ++ T  G  IR+ KN+RIC DCH+  K  SKV 
Sbjct: 543 CVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVF 602

Query: 671 GREIIVRDTNRFHHFLDGLCSCRDYW 679
            RE+ +RD NRFH  +DG+CSC DYW
Sbjct: 603 EREVSLRDKNRFHQIVDGICSCGDYW 628

BLAST of CmaCh13G003260 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 502.3 bits (1292), Expect = 4.7e-142
Identity = 253/599 (42.24%), Postives = 367/599 (61.27%), Query Frame = 1

Query: 81  SETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDL 140
           S+   +   L ++  +    L+P       +L   + LR + +G+ IH +   S F++ +
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271

Query: 141 VIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQ 200
            I  ++++MYAKCGSLE A  LFD M  R++VSW  +I  Y Q+    EA+ +F +M  +
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331

Query: 201 GFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEA 260
           G +P + ++   L A       E GR +H  S++ G + NV V +SL+ MY +   +  A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391

Query: 261 EAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASS 320
            ++F  L ++ +VSWNA+I G A+ G     +  F QM  +  +P  FTY SV TA A  
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451

Query: 321 GSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSII 380
                 KW+H  V++S      ++   L+DMYAK G+I  A+ +F  + ++ V +WN++I
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511

Query: 381 SGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-YEI 440
            GY  HG G  AL+LFEEM K  ++PN +TFLSV++ACSHSGL++ G   F +MK+ Y I
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571

Query: 441 EPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAE 500
           E  + H+  +VDLLGRAGRL+EA  FI +MP++P   V+GA+LGAC++HKN++    AAE
Sbjct: 572 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAE 631

Query: 501 RIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFV 560
           R+FEL+P D G HVLL+NIY +A        VR  M   G++K P CS VEI+N VH F 
Sbjct: 632 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 691

Query: 561 ANDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFS 620
           +   +HP  ++I    EK+   IKE GYVPDT+ VL  ++   +E  L  HSEKLA++F 
Sbjct: 692 SGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFG 751

Query: 621 VLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           +L T  G TI ++KN+R+C DCH+A K+ S V GREI+VRD  RFHHF +G CSC DYW
Sbjct: 752 LLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of CmaCh13G003260 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 500.7 bits (1288), Expect = 1.4e-141
Identity = 233/581 (40.10%), Postives = 369/581 (63.51%), Query Frame = 1

Query: 100 KLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEA 159
           ++ P+   +  +L  C+ L  L++GR +H+ +    F+ D+ +QN ++ +YAKC  L  A
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173

Query: 160 HNLFD--KMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASG 219
             +F+   +P R +VSWT ++S Y+Q+G   EAL +F QM     +P+   L S+L A  
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233

Query: 220 ASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNA 279
                + GR +HA  +K G  +   +  SL  MYA+ G +  A+ +F+ + + N++ WNA
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293

Query: 280 LIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSG 339
           +I+G+A+ G     + +F +M+ ++  P   + +S  +ACA  GS EQ + ++ +V +S 
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353

Query: 340 GQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFE 399
            +   +I + LIDM+AK GS++ A+ VF R + +DVV W+++I GY  HG   EA+ L+ 
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413

Query: 400 EMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAG 459
            M +  V PN++TFL +L AC+HSG++ EG ++F  M  ++I PQ  H+  V+DLLGRAG
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAG 473

Query: 460 RLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSN 519
            LD+A + IK MP++P   VWGALL AC+ H++++LG YAA+++F +DP ++G +V LSN
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSN 533

Query: 520 IYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEK 579
           +YA+A   +  A VR  MKE G+ K+  CSWVE+   +  F   D+SHP  EEI++  E 
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEW 593

Query: 580 ISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRI 639
           I  ++KE G+V +    L  ++ ++ E  L  HSE++A+A+ ++ TP G  +RI KN+R 
Sbjct: 594 IESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRA 653

Query: 640 CGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           C +CH+A K  SK++ REI+VRDTNRFHHF DG+CSC DYW
Sbjct: 654 CVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

BLAST of CmaCh13G003260 vs. TAIR10
Match: AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 495.7 bits (1275), Expect = 4.4e-140
Identity = 235/580 (40.52%), Postives = 368/580 (63.45%), Query Frame = 1

Query: 100  KLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEA 159
            ++ P +  Y  +L  C  L  L+LG  IHS I  + F+ +  + + +++MYAK G L+ A
Sbjct: 485  EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544

Query: 160  HNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGAS 219
             ++  +   +D+VSWT +I+GY+Q     +AL  F QM  +G + +E  L++ + A    
Sbjct: 545  WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604

Query: 220  PSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALI 279
             + + G+Q+HA +   GF+ ++   ++L+ +Y+R G ++E+   F    A + ++WNAL+
Sbjct: 605  QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664

Query: 280  AGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQ 339
            +G  + G  E  +++F +M R+  +  +FT+ S   A + + + +QGK VHA + K+G  
Sbjct: 665  SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD 724

Query: 340  PVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEM 399
                + N LI MYAK GSI DA+K F  +  ++ VSWN+II+ Y++HG G+EAL  F++M
Sbjct: 725  SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784

Query: 400  LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KYEIEPQVSHHVTVVDLLGRAGR 459
            + + V+PN +T + VL+ACSH GL+D+G  YFE M  +Y + P+  H+V VVD+L RAG 
Sbjct: 785  IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGL 844

Query: 460  LDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNI 519
            L  A +FI+EMPI+P A VW  LL AC +HKNM++G +AA  + EL+P DS  +VLLSN+
Sbjct: 845  LSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNL 904

Query: 520  YASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQKMWEKI 579
            YA + + +     R+ MKE GVKKEP  SW+E++N +H F   D++HP+ +EI + ++ +
Sbjct: 905  YAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 964

Query: 580  SGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRIC 639
            + +  EIGYV D   +L  +  + ++  +  HSEKLA++F +L  P    I + KN+R+C
Sbjct: 965  TKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVC 1024

Query: 640  GDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
             DCH+  KF SKV  REIIVRD  RFHHF  G CSC+DYW
Sbjct: 1025 NDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

BLAST of CmaCh13G003260 vs. NCBI nr
Match: gi|659128608|ref|XP_008464284.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 578/658 (87.84%), Postives = 612/658 (93.01%), Query Frame = 1

Query: 21  KLKPFKCFFSAANYGTGSPPCSLTESDSAEGRDWNAAAAAVPFTGVLQDEDLLRKTHISS 80
           KLK  +CF  AA YGTG  PC+ TES+ AE +DWN A A  PFTGVLQDEDLLR THISS
Sbjct: 25  KLKTLRCFLFAAKYGTGLAPCAFTESNMAESQDWNPATA--PFTGVLQDEDLLRTTHISS 84

Query: 81  SETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDL 140
           S+ S+SSTGLYVLDLIN G LEPERTLYSKMLNKCT+LRKLK GR IH+HIQ S FEND 
Sbjct: 85  SDVSSSSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSAFENDP 144

Query: 141 VIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQ 200
           V+ N ILNMYAKCGSLEEA +LFDKMPT+D VSWTVLISGYSQS RA EAL LFP+M H 
Sbjct: 145 VLLNFILNMYAKCGSLEEAQDLFDKMPTKDRVSWTVLISGYSQSRRASEALALFPKMLHL 204

Query: 201 GFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEA 260
           GFQPNEFTLSSLLKASGA PSD+HGRQLHAFSLKYG++MNVHVGSSLLDMYARWGHM+EA
Sbjct: 205 GFQPNEFTLSSLLKASGAGPSDDHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWGHMREA 264

Query: 261 EAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASS 320
           + IF  LAAKNVVSWNALIAGHARKGEGEHVM+LF QMLRQ FEPTHFTYSSVFTACASS
Sbjct: 265 KVIFKSLAAKNVVSWNALIAGHARKGEGEHVMRLFSQMLRQGFEPTHFTYSSVFTACASS 324

Query: 321 GSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSII 380
           GS EQGKWVHAHVIKSGGQP+AYIGNTLIDMYAKSGSIKDAKKVFQRLVK+D+VSWNSII
Sbjct: 325 GSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFQRLVKRDIVSWNSII 384

Query: 381 SGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIE 440
           SGYAQHGLGAEALQLFE++LKAKVQPNEITFLSVLTACSHSGLLDEG+YYFELMKK+ IE
Sbjct: 385 SGYAQHGLGAEALQLFEQVLKAKVQPNEITFLSVLTACSHSGLLDEGKYYFELMKKHGIE 444

Query: 441 PQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAER 500
           PQV+HHVTVVDLLGRAGRL+EANKFI+EMP+EPTAAVWGALLGACRMHKNMDLG YAAE+
Sbjct: 445 PQVAHHVTVVDLLGRAGRLNEANKFIEEMPMEPTAAVWGALLGACRMHKNMDLGVYAAEK 504

Query: 501 IFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVA 560
           IFELDPHDSGPHVLLSNIYASAGRL DA NVRKMMKESGVKKEPACSWVEIEN VHMFVA
Sbjct: 505 IFELDPHDSGPHVLLSNIYASAGRLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVA 564

Query: 561 NDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSV 620
           ND+SHPMREEIQ+MWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAF+V
Sbjct: 565 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAV 624

Query: 621 LKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           LKTPPG TIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFL G+CSCRDYW
Sbjct: 625 LKTPPGLTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 680

BLAST of CmaCh13G003260 vs. NCBI nr
Match: gi|659128610|ref|XP_008464285.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 1179.1 bits (3049), Expect = 0.0e+00
Identity = 571/645 (88.53%), Postives = 604/645 (93.64%), Query Frame = 1

Query: 34  YGTGSPPCSLTESDSAEGRDWNAAAAAVPFTGVLQDEDLLRKTHISSSETSTSSTGLYVL 93
           YGTG  PC+ TES+ AE +DWN A A  PFTGVLQDEDLLR THISSS+ S+SSTGLYVL
Sbjct: 2   YGTGLAPCAFTESNMAESQDWNPATA--PFTGVLQDEDLLRTTHISSSDVSSSSTGLYVL 61

Query: 94  DLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQNSILNMYAKC 153
           DLIN G LEPERTLYSKMLNKCT+LRKLK GR IH+HIQ S FEND V+ N ILNMYAKC
Sbjct: 62  DLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSAFENDPVLLNFILNMYAKC 121

Query: 154 GSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQPNEFTLSSLL 213
           GSLEEA +LFDKMPT+D VSWTVLISGYSQS RA EAL LFP+M H GFQPNEFTLSSLL
Sbjct: 122 GSLEEAQDLFDKMPTKDRVSWTVLISGYSQSRRASEALALFPKMLHLGFQPNEFTLSSLL 181

Query: 214 KASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEAIFNGLAAKNVV 273
           KASGA PSD+HGRQLHAFSLKYG++MNVHVGSSLLDMYARWGHM+EA+ IF  LAAKNVV
Sbjct: 182 KASGAGPSDDHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWGHMREAKVIFKSLAAKNVV 241

Query: 274 SWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGSFEQGKWVHAHV 333
           SWNALIAGHARKGEGEHVM+LF QMLRQ FEPTHFTYSSVFTACASSGS EQGKWVHAHV
Sbjct: 242 SWNALIAGHARKGEGEHVMRLFSQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 301

Query: 334 IKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISGYAQHGLGAEAL 393
           IKSGGQP+AYIGNTLIDMYAKSGSIKDAKKVFQRLVK+D+VSWNSIISGYAQHGLGAEAL
Sbjct: 302 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFQRLVKRDIVSWNSIISGYAQHGLGAEAL 361

Query: 394 QLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQVSHHVTVVDLL 453
           QLFE++LKAKVQPNEITFLSVLTACSHSGLLDEG+YYFELMKK+ IEPQV+HHVTVVDLL
Sbjct: 362 QLFEQVLKAKVQPNEITFLSVLTACSHSGLLDEGKYYFELMKKHGIEPQVAHHVTVVDLL 421

Query: 454 GRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIFELDPHDSGPHV 513
           GRAGRL+EANKFI+EMP+EPTAAVWGALLGACRMHKNMDLG YAAE+IFELDPHDSGPHV
Sbjct: 422 GRAGRLNEANKFIEEMPMEPTAAVWGALLGACRMHKNMDLGVYAAEKIFELDPHDSGPHV 481

Query: 514 LLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVANDESHPMREEIQK 573
           LLSNIYASAGRL DA NVRKMMKESGVKKEPACSWVEIEN VHMFVAND+SHPMREEIQ+
Sbjct: 482 LLSNIYASAGRLRDAGNVRKMMKESGVKKEPACSWVEIENEVHMFVANDDSHPMREEIQR 541

Query: 574 MWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLKTPPGFTIRIKK 633
           MWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAF+VLKTPPG TIRIKK
Sbjct: 542 MWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFAVLKTPPGLTIRIKK 601

Query: 634 NIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           NIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFL G+CSCRDYW
Sbjct: 602 NIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLHGMCSCRDYW 644

BLAST of CmaCh13G003260 vs. NCBI nr
Match: gi|449443492|ref|XP_004139511.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 571/658 (86.78%), Postives = 612/658 (93.01%), Query Frame = 1

Query: 21  KLKPFKCFFSAANYGTGSPPCSLTESDSAEGRDWNAAAAAVPFTGVLQDEDLLRKTHISS 80
           KLK   CF  AA YGT   PC+  ES++AE +DW+   A  PFTGVLQDEDLLR THISS
Sbjct: 26  KLKTLSCFLFAAKYGT---PCAFVESNTAESQDWDPCTA--PFTGVLQDEDLLRTTHISS 85

Query: 81  SETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDL 140
           S TS++STGLYVLDLIN G LEPERTLYSKMLNKCT+LRKLK GR IH+HIQ STFE+DL
Sbjct: 86  SGTSSNSTGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDL 145

Query: 141 VIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQ 200
           V+ N ILNMYAKCGSLEEA +LFDKMPT+DMVSWTVLISGYSQSG+A EAL LFP+M H 
Sbjct: 146 VLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHL 205

Query: 201 GFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEA 260
           GFQPNEFTLSSLLKASG  PSD HGRQLHAFSLKYG++MNVHVGSSLLDMYARW HM+EA
Sbjct: 206 GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 265

Query: 261 EAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASS 320
           + IFN LAAKNVVSWNALIAGHARKGEGEHVM+LF QMLRQ FEPTHFTYSSVFTACASS
Sbjct: 266 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 325

Query: 321 GSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSII 380
           GS EQGKWVHAHVIKSGGQP+AYIGNTLIDMYAKSGSIKDAKKVF+RLVKQD+VSWNSII
Sbjct: 326 GSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSII 385

Query: 381 SGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIE 440
           SGYAQHGLGAEALQLFE+MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK++IE
Sbjct: 386 SGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIE 445

Query: 441 PQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAER 500
            QV+HHVTVVDLLGRAGRL+EANKFI+EMPI+PTAAVWGALLG+CRMHKNMDLG YAAE+
Sbjct: 446 AQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQ 505

Query: 501 IFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVA 560
           IFELDPHDSGPHVLLSNIYASAGRL+DAA VRKMMKESGVKKEPACSWVEIEN VH+FVA
Sbjct: 506 IFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 565

Query: 561 NDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSV 620
           ND+SHPMREEIQ+MWEKISGKIKEIGYVPDTSHVLFFM+QQDRE+KLQYHSEKLALAF+V
Sbjct: 566 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV 625

Query: 621 LKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           LKTPPG TIRIKKNIRICGDCHSAFKFAS+VLGREIIVRDTNRFHHFL G+CSCRDYW
Sbjct: 626 LKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678

BLAST of CmaCh13G003260 vs. NCBI nr
Match: gi|645236270|ref|XP_008224655.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Prunus mume])

HSP 1 Score: 971.8 bits (2511), Expect = 6.0e-280
Identity = 463/656 (70.58%), Postives = 549/656 (83.69%), Query Frame = 1

Query: 26  KCFFSAANYGTGSPPCSLTESDS-AEGRDWNAAAAAVPFTGVLQDEDLLRKTHISSSETS 85
           K   SAA   T +   S T+S+  +EG DW A+        ++QD+DLLRK+        
Sbjct: 26  KLSLSAAQLRTSATRASCTDSEEISEGEDWYASH-------IIQDKDLLRKS------LH 85

Query: 86  TSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLKLGRVIHSHIQGSTFENDLVIQN 145
            S TGL+VLDL+N G LE +RTLY+K+LN+CT + +L+  R++H+HI  S F++DL I N
Sbjct: 86  NSGTGLHVLDLVNRGSLEADRTLYNKLLNRCTQMGRLQQARIVHAHILTSHFKDDLPIHN 145

Query: 146 SILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYSQSGRAFEALGLFPQMFHQGFQP 205
           +ILNMY KCGSLE+A NLFD+MP +D+V+WT LISGYSQ+ R  +AL LFPQM  +G +P
Sbjct: 146 TILNMYVKCGSLEDARNLFDQMPCKDLVTWTALISGYSQNDRPQDALVLFPQMLLRGLEP 205

Query: 206 NEFTLSSLLKASGASPSD--EHGRQLHAFSLKYGFNMNVHVGSSLLDMYARWGHMQEAEA 265
           N+FTLSSL KA+GA   D  EHGRQLH + LKYGF+ NV+VG+SL+DMYARWGHM E++ 
Sbjct: 206 NQFTLSSLFKAAGAVSDDNNEHGRQLHTYCLKYGFDTNVYVGTSLVDMYARWGHMDESQL 265

Query: 266 IFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQNFEPTHFTYSSVFTACASSGS 325
           IF+ L  KN VSWNALIAGHARK +GEH ++L  +MLR+ F+PTHFTYSSVF ACAS+GS
Sbjct: 266 IFDSLETKNEVSWNALIAGHARKAQGEHALRLLGKMLREGFKPTHFTYSSVFIACASAGS 325

Query: 326 FEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAKKVFQRLVKQDVVSWNSIISG 385
            EQGKWVHAH+IKSG + VA++GNTL+DMYAKSGSI+DA+KVF RLV+QD+VSWNS+++G
Sbjct: 326 MEQGKWVHAHMIKSGAKLVAFVGNTLLDMYAKSGSIEDARKVFDRLVRQDIVSWNSMLTG 385

Query: 386 YAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKYEIEPQ 445
           YAQHGLG E +Q FEEML+  +QPN+ITFL VLTACSH+GLLDEGQYYF+LMK Y IEPQ
Sbjct: 386 YAQHGLGQETVQRFEEMLRIGIQPNDITFLCVLTACSHAGLLDEGQYYFDLMKSYNIEPQ 445

Query: 446 VSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALLGACRMHKNMDLGAYAAERIF 505
           +SH+VT+VDLLGRAG LD A KFI+EMPIEPTAAVWGALLGACRMHKN+DLGAYAAER+F
Sbjct: 446 ISHYVTIVDLLGRAGLLDRAEKFIREMPIEPTAAVWGALLGACRMHKNIDLGAYAAERVF 505

Query: 506 ELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKKEPACSWVEIENGVHMFVAND 565
           ELDPHDSGPHVLLSNIYASAGRL+DAA VRK+MK+ GVKKEPACSWVEIEN VHMFVAND
Sbjct: 506 ELDPHDSGPHVLLSNIYASAGRLSDAARVRKLMKDCGVKKEPACSWVEIENAVHMFVAND 565

Query: 566 ESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQDREVKLQYHSEKLALAFSVLK 625
           ++HP R EI +MWE ISGKIKEIGYVPDTSHVLFF+DQQ+REVKLQYHSEKLALAF++L 
Sbjct: 566 DAHPQRVEILQMWETISGKIKEIGYVPDTSHVLFFVDQQEREVKLQYHSEKLALAFALLN 625

Query: 626 TPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTNRFHHFLDGLCSCRDYW 679
           T PG TIRIKKNIR+CGDCHSA K+ SKV GREIIVRDTNRFHHF DG CSCRDYW
Sbjct: 626 TTPGSTIRIKKNIRVCGDCHSAIKYVSKVEGREIIVRDTNRFHHFRDGSCSCRDYW 668

BLAST of CmaCh13G003260 vs. NCBI nr
Match: gi|1009111377|ref|XP_015900763.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 956.4 bits (2471), Expect = 2.6e-275
Identity = 459/676 (67.90%), Postives = 557/676 (82.40%), Query Frame = 1

Query: 10  SLQNLVLSD---LPKLKPFKCF----FSAANYGTGSPPCSLTESDSAEGRDWNAAAAAVP 69
           S ++LVL D     K++ F  F     ++  +GT + P   ++S+S  G D  A+     
Sbjct: 7   SSKSLVLCDGSACSKVRDFGGFVHRTLASCPFGTSAAPALFSDSESG-GNDCYAS----- 66

Query: 70  FTGVLQDEDLLRKTHISSSETSTSSTGLYVLDLINHGKLEPERTLYSKMLNKCTHLRKLK 129
             GV+QD+DLLRK++          TGL+VLDLI+ G LE +R LY+ +L +CT + KL+
Sbjct: 67  --GVIQDKDLLRKSY------GGPGTGLHVLDLIDRGSLEADRILYNTLLKRCTQMGKLR 126

Query: 130 LGRVIHSHIQGSTFENDLVIQNSILNMYAKCGSLEEAHNLFDKMPTRDMVSWTVLISGYS 189
            GR++H+HI  S F++DLV+ N+ILNMYAKCG L++A  LFD+MP +DMV+WT LI+GYS
Sbjct: 127 EGRIVHAHILNSQFKDDLVMGNTILNMYAKCGGLKDARTLFDEMPVKDMVTWTALITGYS 186

Query: 190 QSGRAFEALGLFPQMFHQGFQPNEFTLSSLLKASGASPSDEHGRQLHAFSLKYGFNMNVH 249
           Q+ +  +AL LFPQM   G +PN+FTLSSLLKASG  P+D++GRQLHA+ LKYGF  NV+
Sbjct: 187 QNDQPEDALVLFPQMLRHGLEPNQFTLSSLLKASGGRPTDKYGRQLHAYCLKYGFVSNVY 246

Query: 250 VGSSLLDMYARWGHMQEAEAIFNGLAAKNVVSWNALIAGHARKGEGEHVMKLFRQMLRQN 309
           VGSSL+DMYAR GHM EA++IF+ + +KN VSWNALIAGHARKGEGEH  +LF +M R++
Sbjct: 247 VGSSLVDMYARCGHMVEAQSIFDDIVSKNEVSWNALIAGHARKGEGEHAFRLFWKMQRED 306

Query: 310 FEPTHFTYSSVFTACASSGSFEQGKWVHAHVIKSGGQPVAYIGNTLIDMYAKSGSIKDAK 369
           F+PTHFTYSS+  ACAS+GS EQGKWVHAH+IKSGG+ VA+ GNTL+ MYAKSGSI+DAK
Sbjct: 307 FKPTHFTYSSILAACASTGSLEQGKWVHAHMIKSGGRLVAFAGNTLLYMYAKSGSIEDAK 366

Query: 370 KVFQRLVKQDVVSWNSIISGYAQHGLGAEALQLFEEMLKAKVQPNEITFLSVLTACSHSG 429
           KVF RL+KQD+VSWNSI++GYAQHGL  E LQ FEEML+  ++PN+ITFL VLTACSH+G
Sbjct: 367 KVFDRLLKQDLVSWNSILTGYAQHGLAKETLQQFEEMLRIGIEPNDITFLCVLTACSHAG 426

Query: 430 LLDEGQYYFELMKKYEIEPQVSHHVTVVDLLGRAGRLDEANKFIKEMPIEPTAAVWGALL 489
           LLDEGQYY ELMKKY++EPQVSH+VT+VDLLGRAG LD A +FIKEMPIEPTAAVWGALL
Sbjct: 427 LLDEGQYYLELMKKYKVEPQVSHYVTIVDLLGRAGLLDRAERFIKEMPIEPTAAVWGALL 486

Query: 490 GACRMHKNMDLGAYAAERIFELDPHDSGPHVLLSNIYASAGRLNDAANVRKMMKESGVKK 549
           GACRMHKNM+LGAYAAER+FELDPHDSGPH+LL NIYASAGR +DAA VRKMMK+SGVKK
Sbjct: 487 GACRMHKNMELGAYAAERVFELDPHDSGPHILLYNIYASAGRWDDAAKVRKMMKDSGVKK 546

Query: 550 EPACSWVEIENGVHMFVANDESHPMREEIQKMWEKISGKIKEIGYVPDTSHVLFFMDQQD 609
           EPACSWVEIEN VHMFVAND++HP REEI +MWE I  KIK+IGY+PDTSHVL F+DQQ+
Sbjct: 547 EPACSWVEIENAVHMFVANDDAHPQREEIHRMWENIQSKIKKIGYIPDTSHVLLFVDQQE 606

Query: 610 REVKLQYHSEKLALAFSVLKTPPGFTIRIKKNIRICGDCHSAFKFASKVLGREIIVRDTN 669
           RE+KLQYHSEKLALAFS+L TPPG +IRIKKNIR+CGDCHSA K+ SKV+GREII+RDTN
Sbjct: 607 RELKLQYHSEKLALAFSLLNTPPGSSIRIKKNIRVCGDCHSAIKYVSKVVGREIILRDTN 666

Query: 670 RFHHFLDGLCSCRDYW 679
           RFHHF DG CSC DYW
Sbjct: 667 RFHHFRDGSCSCGDYW 668

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP252_ARATH6.5e-23466.09Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... [more]
PP227_ARATH3.6e-14441.37Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... [more]
PPR32_ARATH8.4e-14142.24Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP224_ARATH2.4e-14040.10Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
PP307_ARATH7.8e-13940.52Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LSV8_CUCSA0.0e+0086.78Uncharacterized protein OS=Cucumis sativus GN=Csa_1G171070 PE=4 SV=1[more]
A0A061GGP7_THECC9.6e-26170.18Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G... [more]
M5X1J8_PRUPE1.8e-25975.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023254mg PE=4 SV=1[more]
F6GZB2_VITVI8.4e-25767.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0455g00030 PE=4 SV=... [more]
A0A0D2NHM0_GOSRA2.8e-25267.91Uncharacterized protein OS=Gossypium raimondii GN=B456_002G032400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G24000.15.1e-22965.90 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13770.12.0e-14541.37 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G11290.14.7e-14242.24 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G12770.11.4e-14140.10 mitochondrial editing factor 22[more]
AT4G13650.14.4e-14040.52 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659128608|ref|XP_008464284.1|0.0e+0087.84PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ... [more]
gi|659128610|ref|XP_008464285.1|0.0e+0088.53PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial ... [more]
gi|449443492|ref|XP_004139511.1|0.0e+0086.78PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
gi|645236270|ref|XP_008224655.1|6.0e-28070.58PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
gi|1009111377|ref|XP_015900763.1|2.6e-27567.90PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G003260.1CmaCh13G003260.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 144..169
score: 2.0E-4coord: 245..266
score: 0.13coord: 448..469
score: 0.12coord: 346..371
score: 0.001coord: 517..540
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 372..419
score: 8.6E-14coord: 270..318
score: 5.9E-14coord: 170..215
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 172..206
score: 5.5E-5coord: 142..171
score: 1.5E-4coord: 346..374
score: 1.3E-4coord: 273..306
score: 1.1E-7coord: 374..408
score: 9.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 508..542
score: 7.881coord: 240..270
score: 6.73coord: 306..340
score: 8.649coord: 372..406
score: 13.176coord: 407..441
score: 9.657coord: 170..204
score: 11.729coord: 341..371
score: 7.618coord: 139..169
score: 9.383coord: 271..305
score: 12.233coord: 442..476
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 247..403
score: 1.2E-9coord: 473..529
score: 1.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 292..531
score: 2.1
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 68..549
score:
NoneNo IPR availablePANTHERPTHR24015:SF897SUBFAMILY NOT NAMEDcoord: 68..549
score: