Csa1G097650 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCCTCCCCCTTTTTTCTCTCTAACTCCATGGATAACCATCGCTCCCCTGTTTTCACTTGGGCCTATTTCTTGCAAGCCAATGTGAGTTTCTCCTCTGTTTTCAATTTCGGTTTTTCATTTCCATTTCCGTTTTCGTTTTCGTTTTCATTTTTGTGCTTTTGGTTTTAACAGAACATTGATGAGTTACGCCATTCACTTTTATGCACAACTCTAGAGCTTGAACAAACTAGAATTGCTGTTCAAGAAGAGCTTAAGAGAAGAGATGATCAAGTTTTTCATCTCAAGAATCTCTTGAATCAAGCCATTAAAGAGAGAGATGAAGCTAATAAAAAATGTGAGAATCTTCTTCTTCACAAACTCTTCTTCAATCAACATTCTGCTCCAATTTCCACCATTGATGACGACCCCACCAAAGCATTTGACTCACAAAATGCTTTCTCTTCCTCCGATTGCGACGAGAGCATCGTATCTGTCTCATCTCCAGTCCCCCCACCGCCGGATATCTCCGATTGGATCTCTGATAAGCCATTGCCGGAAAAGGGTAAGCTCTTACAAGCTGTCATGAAAGCCGGTCCGCTTCTTCAAACTCTGCTTCTCGCTGGACCGCTTCCTCAGTGGAGACATCCTCCGCCGCCGCTTGAATCTTTCCACTTGCCGCCGGTTGCAATTCCACATCCTCCGCCACCGCCGCCGCTGGTACCTGTTCATTCTGAGGCTACTCATTGTGGGATTGTTAACAAGAAGAGGGCTCTGTCTTTGTGTGAGGAATCGGATACGTTACCGGCGACCAAATTCCAAAGGCTTGTTTTTCACTGACTTTCAACCAAAACAACTTAGATTAATCTTACATAATTATATATTAAATTAGAATCAGTCTCAAAAAAAGAAGAAAACACAAAATGGGTCATTTTTTGTGACTTTATTTTGTATAGTTGTTTGTTCTATATATATTACCCCCCAAAACAAAACCCCTAGTTTAGTTAGCTTGGAGTAACTCAAAAAATGGGTTCTCTCTTTCTTTCTTTTTCTTGGCCTCTCCATAGAAATTGTGTGATATGTGACGACATTGATATAGGATGTAGCGTAGCTGATCTGAGAATAGTTGAATTGATTTAAGTATTAGTAAATGTGGAATGTACGGATTTGTAATAGTAGTTTTTTTTTATAAAAAAAATAGTGAAGTTAGAGTGATAGTTTGATTAGGGTTTGGGGGTATTAAGAGAGATTGAGGAGTCTTAAGATGTGTGGGGGAGAGTAGTTGGGGAGGAAAAGCATATGGTCCTACATATCAAGAAGGATCTTTGTTGTTTGTGTGATTTTGTATGGATTTGTATACCAAAAAGATTTAGACCAAGTTTAATTTTATTGTA ATGGATAACCATCGCTCCCCTGTTTTCACTTGGGCCTATTTCTTGCAAGCCAATAACATTGATGAGTTACGCCATTCACTTTTATGCACAACTCTAGAGCTTGAACAAACTAGAATTGCTGTTCAAGAAGAGCTTAAGAGAAGAGATGATCAAGTTTTTCATCTCAAGAATCTCTTGAATCAAGCCATTAAAGAGAGAGATGAAGCTAATAAAAAATGTGAGAATCTTCTTCTTCACAAACTCTTCTTCAATCAACATTCTGCTCCAATTTCCACCATTGATGACGACCCCACCAAAGCATTTGACTCACAAAATGCTTTCTCTTCCTCCGATTGCGACGAGAGCATCGTATCTGTCTCATCTCCAGTCCCCCCACCGCCGGATATCTCCGATTGGATCTCTGATAAGCCATTGCCGGAAAAGGGTAAGCTCTTACAAGCTGTCATGAAAGCCGGTCCGCTTCTTCAAACTCTGCTTCTCGCTGGACCGCTTCCTCAGTGGAGACATCCTCCGCCGCCGCTTGAATCTTTCCACTTGCCGCCGGTTGCAATTCCACATCCTCCGCCACCGCCGCCGCTGGTACCTGTTCATTCTGAGGCTACTCATTGTGGGATTGTTAACAAGAAGAGGGCTCTGTCTTTGTGTGAGGAATCGGATACGTTACCGGCGACCAAATTCCAAAGGCTTGTTTTTCACTGA ATGGATAACCATCGCTCCCCTGTTTTCACTTGGGCCTATTTCTTGCAAGCCAATAACATTGATGAGTTACGCCATTCACTTTTATGCACAACTCTAGAGCTTGAACAAACTAGAATTGCTGTTCAAGAAGAGCTTAAGAGAAGAGATGATCAAGTTTTTCATCTCAAGAATCTCTTGAATCAAGCCATTAAAGAGAGAGATGAAGCTAATAAAAAATGTGAGAATCTTCTTCTTCACAAACTCTTCTTCAATCAACATTCTGCTCCAATTTCCACCATTGATGACGACCCCACCAAAGCATTTGACTCACAAAATGCTTTCTCTTCCTCCGATTGCGACGAGAGCATCGTATCTGTCTCATCTCCAGTCCCCCCACCGCCGGATATCTCCGATTGGATCTCTGATAAGCCATTGCCGGAAAAGGGTAAGCTCTTACAAGCTGTCATGAAAGCCGGTCCGCTTCTTCAAACTCTGCTTCTCGCTGGACCGCTTCCTCAGTGGAGACATCCTCCGCCGCCGCTTGAATCTTTCCACTTGCCGCCGGTTGCAATTCCACATCCTCCGCCACCGCCGCCGCTGGTACCTGTTCATTCTGAGGCTACTCATTGTGGGATTGTTAACAAGAAGAGGGCTCTGTCTTTGTGTGAGGAATCGGATACGTTACCGGCGACCAAATTCCAAAGGCTTGTTTTTCACTGA MDNHRSPVFTWAYFLQANNIDELRHSLLCTTLELEQTRIAVQEELKRRDDQVFHLKNLLNQAIKERDEANKKCENLLLHKLFFNQHSAPISTIDDDPTKAFDSQNAFSSSDCDESIVSVSSPVPPPPDISDWISDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFHLPPVAIPHPPPPPPLVPVHSEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH*
BLAST of Csa1G097650 vs. TrEMBL
Match: A0A0A0LS86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097650 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 1.5e-133 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of Csa1G097650 vs. TrEMBL
Match: A0A0B2QJ34_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_021066 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72 Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
BLAST of Csa1G097650 vs. TrEMBL
Match: I1M4G8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G322300 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72 Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
BLAST of Csa1G097650 vs. TrEMBL
Match: A0A067L6B7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05439 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70 Identity = 148/260 (56.92%), Postives = 177/260 (68.08%), Query Frame = 1
BLAST of Csa1G097650 vs. TrEMBL
Match: A0A0B0MI14_GOSAR (Transcription factor MafA OS=Gossypium arboreum GN=F383_09559 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.2e-69 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1
BLAST of Csa1G097650 vs. TAIR10
Match: AT5G22930.1 (AT5G22930.1 Protein of unknown function (DUF1635)) HSP 1 Score: 198.7 bits (504), Expect = 3.8e-51 Identity = 109/233 (46.78%), Postives = 144/233 (61.80%), Query Frame = 1
BLAST of Csa1G097650 vs. TAIR10
Match: AT3G44940.1 (AT3G44940.1 Protein of unknown function (DUF1635)) HSP 1 Score: 194.5 bits (493), Expect = 7.2e-50 Identity = 116/262 (44.27%), Postives = 153/262 (58.40%), Query Frame = 1
BLAST of Csa1G097650 vs. TAIR10
Match: AT2G28140.1 (AT2G28140.1 Protein of unknown function (DUF1635)) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43 Identity = 108/226 (47.79%), Postives = 137/226 (60.62%), Query Frame = 1
BLAST of Csa1G097650 vs. TAIR10
Match: AT2G28690.1 (AT2G28690.1 Protein of unknown function (DUF1635)) HSP 1 Score: 105.5 bits (262), Expect = 4.4e-23 Identity = 70/190 (36.84%), Postives = 101/190 (53.16%), Query Frame = 1
BLAST of Csa1G097650 vs. TAIR10
Match: AT5G59760.1 (AT5G59760.1 Protein of unknown function (DUF1635)) HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19 Identity = 60/183 (32.79%), Postives = 91/183 (49.73%), Query Frame = 1
BLAST of Csa1G097650 vs. NCBI nr
Match: gi|449459090|ref|XP_004147279.1| (PREDICTED: formin-3 [Cucumis sativus]) HSP 1 Score: 483.4 bits (1243), Expect = 2.2e-133 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of Csa1G097650 vs. NCBI nr
Match: gi|659072065|ref|XP_008463249.1| (PREDICTED: formin-3 [Cucumis melo]) HSP 1 Score: 467.2 bits (1201), Expect = 1.6e-128 Identity = 225/232 (96.98%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of Csa1G097650 vs. NCBI nr
Match: gi|955360090|ref|XP_014621534.1| (PREDICTED: arp2/3 complex-activating protein rickA [Glycine max]) HSP 1 Score: 281.2 bits (718), Expect = 1.7e-72 Identity = 148/254 (58.27%), Postives = 183/254 (72.05%), Query Frame = 1
BLAST of Csa1G097650 vs. NCBI nr
Match: gi|802551260|ref|XP_012064704.1| (PREDICTED: dual specificity protein kinase splA [Jatropha curcas]) HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70 Identity = 148/260 (56.92%), Postives = 177/260 (68.08%), Query Frame = 1
BLAST of Csa1G097650 vs. NCBI nr
Match: gi|728815208|gb|KHG01768.1| (Transcription factor MafA [Gossypium arboreum]) HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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