CU116660 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU116660
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 8541261 .. 8541547 (-)
Sequence length291
The following sequences are available for this feature:

transcribed_cluster sequence

CTTCTTTTTTGAGGCTGATTCTAATTTAATATATAATTATGTAAGATTAATCTAAGTTGTTTTGGTTGAAAGTCAGTGAAAAACAAGCCTTTGGAATTTGGTCGCCGGTAACGTATCCGATTCCTCACACAAAGACAGAGCCCTCTTCTTGTTAACAATCCCACAATGAGTAGCCTCAGAATGAACAGGTACCAGCGGCGGCGGTGGCGGAGGATGTGGAATTGCAACCGGCGGCAAGTGGAAAAGATTCAAGCGGCGGCGGCGGATGTCTCCACTGAGGAAGCGGTCCAG
Library categoryESTs
fruit (8DPP) library2
BLAST of CU116660 vs. TrEMBL
Match: A0A0A0LS86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097650 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = -1

Query: 76  SEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH 135
           SEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH
Sbjct: 198 SEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH 232

Query: 136 181
           
Sbjct: 258 232

BLAST of CU116660 vs. NCBI nr
Match: gi|449459090|ref|XP_004147279.1| (PREDICTED: formin-3 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = -1

Query: 76  SEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH 135
           SEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH
Sbjct: 198 SEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH 232

Query: 136 181
           
Sbjct: 258 232

BLAST of CU116660 vs. NCBI nr
Match: gi|659072065|ref|XP_008463249.1| (PREDICTED: formin-3 [Cucumis melo])

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-10
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = -1

Query: 76  SEATHCGIVNKKRALSLCEESDTLPATKFQRLVFH 135
           SEAT+CGIVNKKRALSLCEESD+LPATKFQRLVFH
Sbjct: 198 SEATNCGIVNKKRALSLCEESDSLPATKFQRLVFH 232

Query: 136 181
           
Sbjct: 258 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LS86_CUCSA5.3e-11100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097650 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449459090|ref|XP_004147279.1|3.4e-11100.00PREDICTED: formin-3 [Cucumis sativus][more]
gi|659072065|ref|XP_008463249.1|6.4e-1094.29PREDICTED: formin-3 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G097650Csa1G097650gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LYVRVFKNP3UI02LYVRVEST
FKNP3UI02MQGRSFKNP3UI02MQGRSEST