Carg03207 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03207
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	arp2/3 complex-activating protein rickA-like
Location	Cucurbita_argyrosperma_scaffold_005 : 631806 .. 632745 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAGTTATGGATTTCTTATAAGAACTTCAACTGTCAGTCTGAAACCGCATTCCTCTCTCTCTCTCTCTTCTTTTTCTCTCTCTGAAGCTTTTGGAGTTCAGTAATGGAGAACCAACGCAGTGCTCTTCTGGGTTGGGCTTACTTTTTCCAAGGAAAGGTAAAGAAACCTTAAATTATTTGCAGAAATTGGCTTCTGGGTTTGTTTCTTCCATTTGTGATTTTCATGGTTGTGATGATGATTTTGCTTCGAAACAGAACATTGAAGAATTGAGGCATTCGCTTTTTTGTGCGACTCTGGAGCTGGAACAGACGAGAGTTGCAGTTCAAGAGGAGCTGAGAAAGAGAGATGAACAGTTGATTCATCTCAAAGATCTTTTTAGCAGAGCCATTAGAGAGAGAGATGAAGCCAATGAAAAGTTTCAGAAACTATTCATTGAGAAGTTTCTACTTCAGCAACGAACAGATCCACATTCAGGAGTTTCCAGCATTGAAGATGAACCAAAGAAAGGTATTGATTCCATCAATGGCTTCTCTTCGTCGGATTGTGAAGAAAGCATTGTCTCATCTCCTGCTATTGATCCAATTCCGCCGCCACAGTTCCCTCCAGCTCTGCCCACCGCGGTGGACTTGGTTACAGAGAAGCCATTGCCTGAAAAAGGCAAGCTTTTGGAAGCAGTGATGAAAGCAGGTCCTCTGCTTCAGACACTGCTTGTAGCTGGACCTCTGCCTGAGTGGAGACATCCACCACCACCACTTGAATCGTTTGAAATTCCTCCGGTGACAATTCCTTCGACGCCTCCGCCACAGATGATCCGAGATTCTCTAGGCACCTTCAATGGCAGCAGCCAGATTTCCAACTGTGGAAGCAGGAAAAGGGCTTTCTTGGAAGGCTCTGATTCTCCAACAGAGACGAAGTCTCTTAGGCTTGCTCCCTGCTGA

mRNA sequence

GTCAGTTATGGATTTCTTATAAGAACTTCAACTGTCAGTCTGAAACCGCATTCCTCTCTCTCTCTCTCTTCTTTTTCTCTCTCTGAAGCTTTTGGAGTTCAGTAATGGAGAACCAACGCAGTGCTCTTCTGGGTTGGGCTTACTTTTTCCAAGGAAAGAAATTGGCTTCTGGGTTTGTTTCTTCCATTTGTGATTTTCATGGTTGTGATGATGATTTTGCTTCGAAACAGAACATTGAAGAATTGAGGCATTCGCTTTTTTGTGCGACTCTGGAGCTGGAACAGACGAGAGTTGCAGTTCAAGAGGAGCTGAGAAAGAGAGATGAACAGTTGATTCATCTCAAAGATCTTTTTAGCAGAGCCATTAGAGAGAGAGATGAAGCCAATGAAAAGTTTCAGAAACTATTCATTGAGAAGTTTCTACTTCAGCAACGAACAGATCCACATTCAGGAGTTTCCAGCATTGAAGATGAACCAAAGAAAGGTATTGATTCCATCAATGGCTTCTCTTCGTCGGATTGTGAAGAAAGCATTGTCTCATCTCCTGCTATTGATCCAATTCCGCCGCCACAGTTCCCTCCAGCTCTGCCCACCGCGGTGGACTTGGTTACAGAGAAGCCATTGCCTGAAAAAGGCAAGCTTTTGGAAGCAGTGATGAAAGCAGGTCCTCTGCTTCAGACACTGCTTGTAGCTGGACCTCTGCCTGAGTGGAGACATCCACCACCACCACTTGAATCGTTTGAAATTCCTCCGGTGACAATTCCTTCGACGCCTCCGCCACAGATGATCCGAGATTCTCTAGGCACCTTCAATGGCAGCAGCCAGATTTCCAACTGTGGAAGCAGGAAAAGGGCTTTCTTGGAAGGCTCTGATTCTCCAACAGAGACGAAGTCTCTTAGGCTTGCTCCCTGCTGA

Coding sequence (CDS)

ATGGAGAACCAACGCAGTGCTCTTCTGGGTTGGGCTTACTTTTTCCAAGGAAAGAAATTGGCTTCTGGGTTTGTTTCTTCCATTTGTGATTTTCATGGTTGTGATGATGATTTTGCTTCGAAACAGAACATTGAAGAATTGAGGCATTCGCTTTTTTGTGCGACTCTGGAGCTGGAACAGACGAGAGTTGCAGTTCAAGAGGAGCTGAGAAAGAGAGATGAACAGTTGATTCATCTCAAAGATCTTTTTAGCAGAGCCATTAGAGAGAGAGATGAAGCCAATGAAAAGTTTCAGAAACTATTCATTGAGAAGTTTCTACTTCAGCAACGAACAGATCCACATTCAGGAGTTTCCAGCATTGAAGATGAACCAAAGAAAGGTATTGATTCCATCAATGGCTTCTCTTCGTCGGATTGTGAAGAAAGCATTGTCTCATCTCCTGCTATTGATCCAATTCCGCCGCCACAGTTCCCTCCAGCTCTGCCCACCGCGGTGGACTTGGTTACAGAGAAGCCATTGCCTGAAAAAGGCAAGCTTTTGGAAGCAGTGATGAAAGCAGGTCCTCTGCTTCAGACACTGCTTGTAGCTGGACCTCTGCCTGAGTGGAGACATCCACCACCACCACTTGAATCGTTTGAAATTCCTCCGGTGACAATTCCTTCGACGCCTCCGCCACAGATGATCCGAGATTCTCTAGGCACCTTCAATGGCAGCAGCCAGATTTCCAACTGTGGAAGCAGGAAAAGGGCTTTCTTGGAAGGCTCTGATTCTCCAACAGAGACGAAGTCTCTTAGGCTTGCTCCCTGCTGA

Protein sequence

MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQTRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTDPHSGVSSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLLEAVMKAGPLLQTLLVAGPLPEWRHPPPPLESFEIPPVTIPSTPPPQMIRDSLGTFNGSSQISNCGSRKRAFLEGSDSPTETKSLRLAPC

Homology

[Close]

BLAST of Carg03207 vs. NCBI nr
Match: XP_022943873.1 (uncharacterized protein LOC111448472 [Cucurbita moschata])

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 244/269 (90.71%), Postives = 244/269 (90.71%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           MENQRSALLGWAYFFQGK                        NIEELRHSLFCATLELEQ
Sbjct: 1   MENQRSALLGWAYFFQGK------------------------NIEELRHSLFCATLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTDPHSGVSSI 120
           TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTDPHSGVSSI
Sbjct: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTDPHSGVSSI 120

Query: 121 EDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL 180
           EDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL
Sbjct: 121 EDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL 180

Query: 181 EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGTFNGSSQ 240
           EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGTFNGSSQ
Sbjct: 181 EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGTFNGSSQ 240

Query: 241 ISNCGSRKRAFLEGSDSPTETKSLRLAPC 270
           ISNCGSRKRAFLEGSDSPTETKS RLAPC
Sbjct: 241 ISNCGSRKRAFLEGSDSPTETKSQRLAPC 245

[Close]

BLAST of Carg03207 vs. NCBI nr
Match: XP_022985577.1 (uncharacterized protein LOC111483607 [Cucurbita maxima])

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 241/269 (89.59%), Postives = 242/269 (89.96%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           MENQRSALLGWAYFFQGK                        NIEELRHSLFCATLELEQ
Sbjct: 1   MENQRSALLGWAYFFQGK------------------------NIEELRHSLFCATLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTDPHSGVSSI 120
           TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLL QRTDPHSGVSSI
Sbjct: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLHQRTDPHSGVSSI 120

Query: 121 EDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL 180
           EDEPKK IDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL
Sbjct: 121 EDEPKKCIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL 180

Query: 181 EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGTFNGSSQ 240
           EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQM+RDSLGTFNGSSQ
Sbjct: 181 EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMLRDSLGTFNGSSQ 240

Query: 241 ISNCGSRKRAFLEGSDSPTETKSLRLAPC 270
           ISNCGSRKRAFLEGSDSPTETKS RLAPC
Sbjct: 241 ISNCGSRKRAFLEGSDSPTETKSQRLAPC 245

[Close]

BLAST of Carg03207 vs. NCBI nr
Match: XP_023512550.1 (uncharacterized protein LOC111777259 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 3.1e-95
Identity = 239/269 (88.85%), Postives = 243/269 (90.33%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           ME+QRSALLGWAYFFQGK                        NIEELRHSLFCATLELEQ
Sbjct: 1   MEHQRSALLGWAYFFQGK------------------------NIEELRHSLFCATLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTDPHSGVSSI 120
           TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLL QRTDPHSGVSSI
Sbjct: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLHQRTDPHSGVSSI 120

Query: 121 EDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL 180
           EDEPKKGIDSINGF+SSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL
Sbjct: 121 EDEPKKGIDSINGFTSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKGKLL 180

Query: 181 EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGTFNGSSQ 240
           EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQM+RDSLGTFNGSSQ
Sbjct: 181 EAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMLRDSLGTFNGSSQ 240

Query: 241 ISNCGSRKRAFLEGSDSPTETKSLRLAPC 270
           IS+CGSRKRAFLEGSDSPTETKS RLAPC
Sbjct: 241 ISSCGSRKRAFLEGSDSPTETKSQRLAPC 245

[Close]

BLAST of Carg03207 vs. NCBI nr
Match: XP_008465402.1 (PREDICTED: uncharacterized protein LOC103503032 [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 3.6e-83
Identity = 220/275 (80.00%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           MENQRSALL WAYFFQGK                        NIEELRHSLFCATLELEQ
Sbjct: 1   MENQRSALLSWAYFFQGK------------------------NIEELRHSLFCATLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLL---QQRTDPHSGV 120
           TRVAVQEELRKRDEQLIHLKDLFS+AIRERDEANEKFQKL IEK LL   QQRTDPHSG+
Sbjct: 61  TRVAVQEELRKRDEQLIHLKDLFSKAIRERDEANEKFQKLLIEKLLLQQQQQRTDPHSGI 120

Query: 121 SSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALP---TAVDLVTEKPLP 180
           SSIEDEPKKGIDSINGFS SDCEESIVSSPAIDPIPPPQFPPA       V+LV EKPLP
Sbjct: 121 SSIEDEPKKGIDSINGFSLSDCEESIVSSPAIDPIPPPQFPPAXXXPHIQVELVPEKPLP 180

Query: 181 EKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGT 240
           EKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     QM+RDS  T
Sbjct: 181 EKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPPSQMLRDSPVT 240

Query: 241 FNGSSQISNCGSRKRAFLEGSDSPTETKSLRLAPC 270
           FNGSS I+NCG+RKRAFLEGSDSPTETK  RLAPC
Sbjct: 241 FNGSSHITNCGNRKRAFLEGSDSPTETKCQRLAPC 251

[Close]

BLAST of Carg03207 vs. NCBI nr
Match: XP_011657021.1 (PREDICTED: uncharacterized protein LOC101221076 [Cucumis sativus] >KGN46875.1 hypothetical protein Csa_6G148170 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 6.4e-80
Identity = 214/277 (77.26%), Postives = 220/277 (79.42%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           MENQRSALLGWAYFFQGK                        NIEELRHSLFCATLELEQ
Sbjct: 1   MENQRSALLGWAYFFQGK------------------------NIEELRHSLFCATLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKF-----LLQQRTDPHS 120
           TRVAVQEELRKRDEQLIHLKDLFS+AIRERDEANEKFQKL IEK          RTDPHS
Sbjct: 61  TRVAVQEELRKRDEQLIHLKDLFSKAIRERDEANEKFQKLLIEKLXXXXXXXXXRTDPHS 120

Query: 121 GVSSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALP---TAVDLVTEKP 180
           G+SSIEDEPKKGIDSINGFS SDCEESIVSSPAIDPIPPPQFPP        V+LV EKP
Sbjct: 121 GISSIEDEPKKGIDSINGFSLSDCEESIVSSPAIDPIPPPQFPPXXXXPHIEVELVPEKP 180

Query: 181 LPEKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSL 240
           LPEKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       M+RDS 
Sbjct: 181 LPEKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTPPSHMLRDSP 240

Query: 241 GTFNGSSQISNCGSRKRAFLEGSDSPTETKSLRLAPC 270
            TFNGSS I+NCG+RKRAFLEGSDSPTETK  RLAPC
Sbjct: 241 VTFNGSSHITNCGNRKRAFLEGSDSPTETKCQRLAPC 253

[Close]

BLAST of Carg03207 vs. TAIR10
Match: AT5G22930.1 (Protein of unknown function (DUF1635))

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 88/193 (45.60%), Postives = 111/193 (57.51%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           M+NQ +ALLGW Y+   K                          EE+R SL   TLEL+Q
Sbjct: 1   MDNQSNALLGWPYYSHAK------------------------TTEEIRQSLLYTTLELDQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQR---TDPHSGV 120
           T++   EE+RKRDEQLIHLKD+ ++ I+ERDEA EK Q+L  +   LQQ+   T P SG 
Sbjct: 61  TKMFAYEEIRKRDEQLIHLKDILTKTIKERDEALEKCQRLMFDSHSLQQQKHMTPPLSGA 120

Query: 121 SSIEDE--PKKGIDSINGFSSSDCEESIVSSPAIDPIPPP-QFPPALPTAV---DLVTEK 180
           SSIEDE    + + S   FSSSDCEESI+S       PPP Q      T +    L+ +K
Sbjct: 121 SSIEDEQVQPQQLRSNKSFSSSDCEESIMSPTDHIMNPPPCQLEEVSGTEIIMDPLLQDK 169

Query: 181 PLPEKGKLLEAVM 185
           PLPEKGKLL+AV+
Sbjct: 181 PLPEKGKLLQAVI 169

[Close]

BLAST of Carg03207 vs. TAIR10
Match: AT2G28140.1 (Protein of unknown function (DUF1635))

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-22
Identity = 67/144 (46.53%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 42  QNIEELRHSLFCATLELEQTRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLF 101
           + IEELRHSL   T+ELEQTR+   EEL  +D+Q++ LKDL ++AI+E+DEA E+++++ 
Sbjct: 21  KTIEELRHSLLHTTMELEQTRMVASEELIAKDDQIMQLKDLLNKAIKEKDEAQERYKRIL 80

Query: 102 IEK-FLLQQRTDPHSGVSSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPA 161
           +++ FLLQ +TD        E +P     +INGF SSD EESIVSS          F P 
Sbjct: 81  LDQNFLLQHQTDE-------EQDP-----NINGFHSSDGEESIVSS----------FEPP 140

Query: 162 LPTAVDLVTEKPLPEKGKLLEAVM 185
           +   +D   E  LPEKGKLL+AV+
Sbjct: 141 VEIELDF-PEMTLPEKGKLLKAVV 141

[Close]

BLAST of Carg03207 vs. TAIR10
Match: AT3G44940.1 (Protein of unknown function (DUF1635))

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 70/201 (34.83%), Postives = 95/201 (47.26%), Query Frame = 0


Query: 3   NQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQTR 62
           +Q ++LL W YF  GK                          EELR +L   T+ELEQT+
Sbjct: 2   DQSNSLLSWTYFSHGK------------------------TTEELRQTLVYTTMELEQTK 61

Query: 63  VAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTDPHSGVSSIED 122
           +   EELRKRDEQLIHL+D+ ++ ++ERDEA EK+  L                      
Sbjct: 62  LVAHEELRKRDEQLIHLEDVLTKTLKERDEALEKYNHLXXXXXXXXXXXXXXXXXXXXXX 121

Query: 123 ----------------EPKK-GIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPAL--PT 182
                           +P++  ++S   FSSSD EESI+S   IDP+   Q         
Sbjct: 122 XXXXXXXXXXXXXXXVQPQQPQLNSNKSFSSSDTEESIMSPSVIDPVTMNQQIEVSGDEM 178

Query: 183 AVDLVTEKPLPEKGKLLEAVM 185
              L+ +KPLPEKGKLL+AV+
Sbjct: 182 LATLLPDKPLPEKGKLLQAVI 178

[Close]

BLAST of Carg03207 vs. TrEMBL
Match: tr|A0A1S3CNT5|A0A1S3CNT5_CUCME (uncharacterized protein LOC103503032 OS=Cucumis melo OX=3656 GN=LOC103503032 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.4e-83
Identity = 220/275 (80.00%), Postives = 226/275 (82.18%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           MENQRSALL WAYFFQGK                        NIEELRHSLFCATLELEQ
Sbjct: 1   MENQRSALLSWAYFFQGK------------------------NIEELRHSLFCATLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLL---QQRTDPHSGV 120
           TRVAVQEELRKRDEQLIHLKDLFS+AIRERDEANEKFQKL IEK LL   QQRTDPHSG+
Sbjct: 61  TRVAVQEELRKRDEQLIHLKDLFSKAIRERDEANEKFQKLLIEKLLLQQQQQRTDPHSGI 120

Query: 121 SSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALP---TAVDLVTEKPLP 180
           SSIEDEPKKGIDSINGFS SDCEESIVSSPAIDPIPPPQFPPA       V+LV EKPLP
Sbjct: 121 SSIEDEPKKGIDSINGFSLSDCEESIVSSPAIDPIPPPQFPPAXXXPHIQVELVPEKPLP 180

Query: 181 EKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGT 240
           EKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     QM+RDS  T
Sbjct: 181 EKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPPSQMLRDSPVT 240

Query: 241 FNGSSQISNCGSRKRAFLEGSDSPTETKSLRLAPC 270
           FNGSS I+NCG+RKRAFLEGSDSPTETK  RLAPC
Sbjct: 241 FNGSSHITNCGNRKRAFLEGSDSPTETKCQRLAPC 251

[Close]

BLAST of Carg03207 vs. TrEMBL
Match: tr|A0A0A0KAW2|A0A0A0KAW2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148170 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.2e-80
Identity = 214/277 (77.26%), Postives = 220/277 (79.42%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           MENQRSALLGWAYFFQGK                        NIEELRHSLFCATLELEQ
Sbjct: 1   MENQRSALLGWAYFFQGK------------------------NIEELRHSLFCATLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKF-----LLQQRTDPHS 120
           TRVAVQEELRKRDEQLIHLKDLFS+AIRERDEANEKFQKL IEK          RTDPHS
Sbjct: 61  TRVAVQEELRKRDEQLIHLKDLFSKAIRERDEANEKFQKLLIEKLXXXXXXXXXRTDPHS 120

Query: 121 GVSSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALP---TAVDLVTEKP 180
           G+SSIEDEPKKGIDSINGFS SDCEESIVSSPAIDPIPPPQFPP        V+LV EKP
Sbjct: 121 GISSIEDEPKKGIDSINGFSLSDCEESIVSSPAIDPIPPPQFPPXXXXPHIEVELVPEKP 180

Query: 181 LPEKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSL 240
           LPEKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       M+RDS 
Sbjct: 181 LPEKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTPPSHMLRDSP 240

Query: 241 GTFNGSSQISNCGSRKRAFLEGSDSPTETKSLRLAPC 270
            TFNGSS I+NCG+RKRAFLEGSDSPTETK  RLAPC
Sbjct: 241 VTFNGSSHITNCGNRKRAFLEGSDSPTETKCQRLAPC 253

[Close]

BLAST of Carg03207 vs. TrEMBL
Match: tr|A0A2I4EHV2|A0A2I4EHV2_9ROSI (proline-rich receptor-like protein kinase PERK10 OS=Juglans regia OX=51240 GN=LOC108989716 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 7.0e-51
Identity = 171/277 (61.73%), Postives = 198/277 (71.48%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           M++QR+ LL WAY++QGK                         +EELR SL   TLELEQ
Sbjct: 1   MDDQRNPLLSWAYYYQGK------------------------TMEELRTSLLYTTLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQ---QRTDPHSGV 120
           TR+A QEELRKRD+QL+HLKDL S+AIRERDEA EK Q+L +EK L Q   Q+T P SG+
Sbjct: 61  TRLAAQEELRKRDDQLLHLKDLLSKAIRERDEAQEKCQRLLLEKILFQQQHQQTAPLSGI 120

Query: 121 SSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPP-----ALP-TAVDLVTEK 180
           SSIEDEP++GIDS NGFSSSDCEESIVSSP +DPIPP + PP     ++P T ++L  EK
Sbjct: 121 SSIEDEPRRGIDSNNGFSSSDCEESIVSSPIVDPIPPSRLPPPPATQSVPQTTIELAPEK 180

Query: 181 PLPEKGKLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIR-D 240
           PLPEKGKLL+AVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        R D
Sbjct: 181 PLPEKGKLLQAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPPQPEFRQD 240

Query: 241 SLGTFNGSSQISNCG-SRKRAFLEGSDSPTETKSLRL 267
           SL      +  ++CG +RKR   EGSDSPTETK  RL
Sbjct: 241 SLTNIISCNTPTSCGINRKRVLCEGSDSPTETKYPRL 253

[Close]

BLAST of Carg03207 vs. TrEMBL
Match: tr|A0A2P4IZ76|A0A2P4IZ76_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58873 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50
Identity = 168/285 (58.95%), Postives = 195/285 (68.42%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           M+NQRS LL   Y+ QGK                         +EELRHSL   TLELEQ
Sbjct: 1   MDNQRSPLLNLVYYCQGK------------------------TMEELRHSLLFTTLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQ-------RTDP 120
           T++AVQEELRKRD+QL+HLKDL  + IRE+DEA EK  +L +EK L+QQ          P
Sbjct: 61  TKLAVQEELRKRDDQLLHLKDLLDKTIREKDEAQEKCHRLLLEKLLIQQXXXXXXXXAAP 120

Query: 121 HSGVSSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPL 180
            SG+SSIEDEP++GIDS NGFSSSDCEESIVSSP +DP PPPQ P    ++++LV EKPL
Sbjct: 121 LSGISSIEDEPRRGIDSNNGFSSSDCEESIVSSPIVDPTPPPQLPAPSQSSLELVPEKPL 180

Query: 181 PEKGKLLEAVM----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           PEKGKLL+AVM          XXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXX
Sbjct: 181 PEKGKLLQAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIPSAXXXXXXXXXXX 240

Query: 241 XXQMIRDSLGTFNGSSQISNCG--SRKRAFLEGSDSPTETKSLRL 267
           XX + +DSL   NG + ++NCG  +RKR   EGSDSPTETK  RL
Sbjct: 241 XXXLHQDSLFNINGCNSLTNCGRVNRKRVLYEGSDSPTETKYQRL 261

[Close]

BLAST of Carg03207 vs. TrEMBL
Match: tr|I1M4G8|I1M4G8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100806513 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.5e-48
Identity = 176/276 (63.77%), Postives = 200/276 (72.46%), Query Frame = 0


Query: 1   MENQRSALLGWAYFFQGKKLASGFVSSICDFHGCDDDFASKQNIEELRHSLFCATLELEQ 60
           M+NQRS LL WAY+FQGK                        ++EELR SL   TLELEQ
Sbjct: 1   MDNQRSPLLSWAYYFQGK------------------------SMEELRQSLIYTTLELEQ 60

Query: 61  TRVAVQEELRKRDEQLIHLKDLFSRAIRERDEANEKFQKLFIEKFLLQQRTD---PHSGV 120
           TRVAVQEEL+KRDEQL++LKDL S+ IRERDEA EK Q+L +EK + QQ+     P SG+
Sbjct: 61  TRVAVQEELKKRDEQLLNLKDLLSKTIRERDEAQEKCQRLLLEKLVFQQQLQHAAPVSGI 120

Query: 121 SSIEDEPKKGIDSINGFSSSDCEESIVSSPAIDPIPPPQFPPALPTAVDLVTEKPLPEKG 180
           SSIEDEP++GIDS NG SSSDCEESIVSSP ID +P PQ P ++   ++L  +KPLPEKG
Sbjct: 121 SSIEDEPRRGIDSNNGHSSSDCEESIVSSPVIDHLPQPQ-PQSM---IELTPDKPLPEKG 180

Query: 181 KLLEAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMIRDSLGTF-- 240
           KLL+AVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        TF  
Sbjct: 181 KLLQAVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHQDTFFN 240

Query: 241 --NGSSQ-ISNCG--SRKRAFLEGSDSPTETKSLRL 267
             NGSS   +NCG  SRKR F +GSDSPTETK  RL
Sbjct: 241 KTNGSSSTTTNCGRLSRKRVFCDGSDSPTETKYQRL 248

The following BLAST results are available for this feature:

BLAST of Carg03207 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943873.1	1.5e-97	90.71	uncharacterized protein LOC111448472 [Cucurbita moschata]	[more]
XP_022985577.1	1.1e-95	89.59	uncharacterized protein LOC111483607 [Cucurbita maxima]	[more]
XP_023512550.1	3.1e-95	88.85	uncharacterized protein LOC111777259 [Cucurbita pepo subsp. pepo]	[more]
XP_008465402.1	3.6e-83	80.00	PREDICTED: uncharacterized protein LOC103503032 [Cucumis melo]	[more]
XP_011657021.1	6.4e-80	77.26	PREDICTED: uncharacterized protein LOC101221076 [Cucumis sativus] >KGN46875.1 hy...	[more]

BLAST of Carg03207 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22930.1	1.3e-29	45.60	Protein of unknown function (DUF1635)	[more]
AT2G28140.1	3.3e-22	46.53	Protein of unknown function (DUF1635)	[more]
AT3G44940.1	3.8e-18	34.83	Protein of unknown function (DUF1635)	[more]

BLAST of Carg03207 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03207 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CNT5\|A0A1S3CNT5_CUCME	2.4e-83	80.00	uncharacterized protein LOC103503032 OS=Cucumis melo OX=3656 GN=LOC103503032 PE=...	[more]
tr\|A0A0A0KAW2\|A0A0A0KAW2_CUCSA	4.2e-80	77.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148170 PE=4 SV=1	[more]
tr\|A0A2I4EHV2\|A0A2I4EHV2_9ROSI	7.0e-51	61.73	proline-rich receptor-like protein kinase PERK10 OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|A0A2P4IZ76\|A0A2P4IZ76_QUESU	1.2e-50	58.95	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58873 PE=4 SV=1	[more]
tr\|I1M4G8\|I1M4G8_SOYBN	2.5e-48	63.77	Uncharacterized protein OS=Glycine max OX=3847 GN=100806513 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012862	DUF1635

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03207-RA	Carg03207-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012862	Protein of unknown function DUF1635	PFAM	PF07795	DUF1635	coord: 43..265 e-value: 1.9E-79 score: 266.5
IPR012862	Protein of unknown function DUF1635	PANTHER	PTHR33431	FAMILY NOT NAMED	coord: 1..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..269
None	No IPR available	PANTHER	PTHR33431:SF3	SUBFAMILY NOT NAMED	coord: 1..266

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03207	Cla008704	Watermelon (97103) v1	carwmB0330
Carg03207	Csa1G097650	Cucumber (Chinese Long) v2	carcuB0360
Carg03207	Csa6G148170	Cucumber (Chinese Long) v2	carcuB0371
Carg03207	MELO3C026948	Melon (DHL92) v3.5.1	carmeB0340
Carg03207	ClCG02G021540	Watermelon (Charleston Gray)	carwcgB0327
Carg03207	CSPI06G11860	Wild cucumber (PI 183967)	carcpiB0374
Carg03207	Cucsa.385740	Cucumber (Gy14) v1	carcgyB0403
Carg03207	CmaCh20G005210	Cucurbita maxima (Rimu)	carcmaB0473
Carg03207	CmaCh02G013820	Cucurbita maxima (Rimu)	carcmaB0474
Carg03207	CmaCh13G002280	Cucurbita maxima (Rimu)	carcmaB0467
Carg03207	CmoCh02G014150	Cucurbita moschata (Rifu)	carcmoB0465
Carg03207	CmoCh13G002310	Cucurbita moschata (Rifu)	carcmoB0458
Carg03207	CmoCh20G005510	Cucurbita moschata (Rifu)	carcmoB0464
Carg03207	Lsi10G012280	Bottle gourd (USVL1VR-Ls)	carlsiB303
Carg03207	Cp4.1LG05g02920	Cucurbita pepo (Zucchini)	carcpeB0480
Carg03207	Cp4.1LG20g07090	Cucurbita pepo (Zucchini)	carcpeB0470
Carg03207	Cp4.1LG16g05140	Cucurbita pepo (Zucchini)	carcpeB0465
Carg03207	CsGy1G013240	Cucumber (Gy14) v2	carcgybB0342
Carg03207	CsGy6G011980	Cucumber (Gy14) v2	carcgybB0351
Carg03207	MELO3C026948.2	Melon (DHL92) v3.6.1	carmedB0346
Carg03207	CsaV3_6G014310	Cucumber (Chinese Long) v3	carcucB0375
Carg03207	CsaV3_1G013310	Cucumber (Chinese Long) v3	carcucB0363
Carg03207	Cla97C02G047620	Watermelon (97103) v2	carwmbB0346
Carg03207	Bhi10G000108	Wax gourd	carwgoB0421
Carg03207	Bhi08G000227	Wax gourd	carwgoB0427

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03207	Carg02585	Silver-seed gourd	carcarB366

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03207	Silver-seed gourd	carcarB187
Carg03207	Silver-seed gourd	carcarB287
Carg03207	Cucurbita maxima (Rimu)	carcmaB0482
Carg03207	Cucurbita moschata (Rifu)	carcmoB0460
Carg03207	Cucurbita moschata (Rifu)	carcmoB0469
Carg03207	Watermelon (97103) v2	carwmbB0340
Carg03207	Watermelon (97103) v2	carwmbB0353
Carg03207	Wax gourd	carwgoB0415
Carg03207	Wax gourd	carwgoB0423