Csa1G089470 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G089470
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
LocationChr1 : 8351154 .. 8352006 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATGATTACGGCTTTTGCTCAATGTGGTAGAGGTTTAGAAGCATTAAAGCTCTTTGAGAGTTTGTTGACTGAAGATAGTTTTGTGCCTGATCATATCTGTTTTACCGCAGTTCTAACAGCTTGCAATCATGCAGGATTACTAGATGAGGCAGTTGAATATTTCAATAAAATGAGGCGTGAATACCATTTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGGAATGTAGAAAAGGCCAAGCAAATGATGGAGCAAATGCCTTACGAATCTAATTACGTAGTTTTGTGTTCCCTCTTGGGTGCTTGTAAAGTTCATGCAGAGGTCGAGCTTGGGAGGGAGGTGGCACATCGACTCATTGAGATGGATCCAAGTAATGCTGCACCATATTTGACGCTTGCCCATATCTCTGCGAAAGCTGGTTTATGGACACAGGTGGGTGAGATTAGAAAAGAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAACTCATGTATTCTCAGTTGGTGATGCTGCTCATCCGAAATCATGTGAGATTTATTCAAAACTTGATCAACTGAATTTGGATATGAAAGCAGCTGAACAATCATCAAAAGCACTTGAGTATGACGTTGAGTGTTAATGTCAGTGATGGAATAGAGTTATTGTTTGAAGTTCTAATAGCAGACTAGTTGGAAATGAGAATCCAGGGGATTCACCTTTGCAGTGAATTCTTGGATGAGCAATACTCATATTTGTTTAGGATGGTTGGATTAGAAAAAATGGCGGAGACTACCAGGGTGTGGCAATCGATTGCAACCCATA

mRNA sequence

ATGATTACGGCTTTTGCTCAATGTGGTAGAGGTTTAGAAGCATTAAAGCTCTTTGAGAGTTTGTTGACTGAAGATAGTTTTGTGCCTGATCATATCTGTTTTACCGCAGTTCTAACAGCTTGCAATCATGCAGGATTACTAGATGAGGCAGTTGAATATTTCAATAAAATGAGGCGTGAATACCATTTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGGAATGTAGAAAAGGCCAAGCAAATGATGGAGCAAATGCCTTACGAATCTAATTACGTAGTTTTGTGTTCCCTCTTGGGTGCTTGTAAAGTTCATGCAGAGGTCGAGCTTGGGAGGGAGGTGGCACATCGACTCATTGAGATGGATCCAAGTAATGCTGCACCATATTTGACGCTTGCCCATATCTCTGCGAAAGCTGGTTTATGGACACAGGTGGGTGAGATTAGAAAAGAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAACTCATGTATTCTCAGTTGGTGATGCTGCTCATCCGAAATCATGTGAGATTTATTCAAAACTTGATCAACTGAATTTGGATATGAAAGCAGCTGAACAATCATCAAAAGCACTTGAGTATGACGTTGAGTGTTAA

Coding sequence (CDS)

ATGATTACGGCTTTTGCTCAATGTGGTAGAGGTTTAGAAGCATTAAAGCTCTTTGAGAGTTTGTTGACTGAAGATAGTTTTGTGCCTGATCATATCTGTTTTACCGCAGTTCTAACAGCTTGCAATCATGCAGGATTACTAGATGAGGCAGTTGAATATTTCAATAAAATGAGGCGTGAATACCATTTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGGAATGTAGAAAAGGCCAAGCAAATGATGGAGCAAATGCCTTACGAATCTAATTACGTAGTTTTGTGTTCCCTCTTGGGTGCTTGTAAAGTTCATGCAGAGGTCGAGCTTGGGAGGGAGGTGGCACATCGACTCATTGAGATGGATCCAAGTAATGCTGCACCATATTTGACGCTTGCCCATATCTCTGCGAAAGCTGGTTTATGGACACAGGTGGGTGAGATTAGAAAAGAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAACTCATGTATTCTCAGTTGGTGATGCTGCTCATCCGAAATCATGTGAGATTTATTCAAAACTTGATCAACTGAATTTGGATATGAAAGCAGCTGAACAATCATCAAAAGCACTTGAGTATGACGTTGAGTGTTAA

Protein sequence

MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRREYHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGREVAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTHVFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC*
Homology
[Close]
BLAST of Csa1G089470 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.0e-47
Identity = 94/214 (43.93%), Postives = 136/214 (63.55%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  FAQ G G EAL+LF  +L E    PDHI    VL+AC HAG ++E   YF+ M R+
Sbjct: 464 MIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 523

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           + + P  DHY C++DL  R G +E+AK M+E+MP + + V+  SLL ACKVH  + LG+ 
Sbjct: 524 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKY 583

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
           VA +L+E++PSN+ PY+ L+++ A+ G W  V  +RK M+++ V K  G SWI+I    H
Sbjct: 584 VAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDH 643

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSK 215
           VF V D +HP+  +I+S LD L  +M+  +  ++
Sbjct: 644 VFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676


HSP 2 Score: 40.8 bits (94), Expect = 2.3e-02
Identity = 29/113 (25.66%), Postives = 56/113 (49.56%), Query Frame = 1 

Query: 20  SLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRREYHLDPQIDHYACLIDLYAR 79
           SL+ +  F+ D    +A++   +  G +++A   F++M      D  +  +  LI  + +
Sbjct: 176 SLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-----DRNVVSWNSLITCFEQ 235

Query: 80  NGNVEKAK---QMMEQMPYESNYVVLCSLLGACKVHAEVELGREVAHRLIEMD 130
           NG   +A    QMM +   E + V L S++ AC   + +++G+EV  R+++ D
Sbjct: 236 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283

[Close]
BLAST of Csa1G089470 vs. Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 7.4e-46
Identity = 85/222 (38.29%), Postives = 145/222 (65.32%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +A  G+G EA++LFE ++ E+   P+H+ F ++L AC H GL+D+ +EYF  M+R+
Sbjct: 675 MICGYAHHGKGEEAIQLFERMILEN-IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 734

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHA-EVELGR 120
           Y LDPQ+ HY+ ++D+  ++G V++A +++ +MP+E++ V+  +LLG C +H   VE+  
Sbjct: 735 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 794

Query: 121 EVAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKT 180
           E    L+ +DP +++ Y  L+++ A AG+W +V ++R+ M+  +++K  G SW+E+  + 
Sbjct: 795 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDEL 854

Query: 181 HVFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVE 222
           HVF VGD AHP+  EIY +L  +  +MK  + SS     +VE
Sbjct: 855 HVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVE 895

[Close]
BLAST of Csa1G089470 vs. Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.2e-45
Identity = 93/223 (41.70%), Postives = 136/223 (60.99%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +++ G G  AL+ FES+  E    PD     AVL+AC+H GL+D+  +YF  M ++
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 540

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y + P   HYAC++DL  R G +E A  +M+ MP+E +  +  +LLGA +VH   EL   
Sbjct: 541 YGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAET 600

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A ++  M+P N+  Y+ L+++ A +G W  VG++R  M+ K V+K  G+SWIEI  KTH
Sbjct: 601 AADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTH 660

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSK--ALEYDVE 222
            FSVGD  HP+  EI++ L++L+L MK A   SK   + +DVE
Sbjct: 661 TFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702


HSP 2 Score: 35.0 bits (79), Expect = 1.2e+00
Identity = 20/60 (33.33%), Postives = 30/60 (50.00%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MIT +AQCG+  EA  LF+ +   D      + + A++   + +G   EA+  F +M RE
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDP-----VSWAAMIAGYSQSGHSFEALRLFVQMERE 403

[Close]
BLAST of Csa1G089470 vs. Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-44
Identity = 85/202 (42.08%), Postives = 128/202 (63.37%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI A AQ G   EAL+LFE++L E    PDHI +  V +AC HAGL+++  +YF+ M+  
Sbjct: 486 MIIALAQHGHAEEALELFETMLME-GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 545

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
             + P + HYAC++DL+ R G +++A++ +E+MP E + V   SLL AC+VH  ++LG+ 
Sbjct: 546 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 605

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A RL+ ++P N+  Y  LA++ +  G W +  +IRK M+  RV+K  G+SWIE+  K H
Sbjct: 606 AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 665

Query: 181 VFSVGDAAHPKSCEIYSKLDQL 203
           VF V D  HP+  EIY  + ++
Sbjct: 666 VFGVEDGTHPEKNEIYMTMKKI 686


HSP 2 Score: 40.8 bits (94), Expect = 2.3e-02
Identity = 29/96 (30.21%), Postives = 42/96 (43.75%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI+ F Q G  L AL +F  +L +    PD     +VL+AC +   L        K    
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKL-----CIGKQIHS 308

Query: 61  YHLDPQIDHYA----CLIDLYARNGNVEKAKQMMEQ 93
           + +    D        LI +Y+R G VE A++++EQ
Sbjct: 309 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339

[Close]
BLAST of Csa1G089470 vs. Swiss-Prot
Match: PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.1e-44
Identity = 86/207 (41.55%), Postives = 126/207 (60.87%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +AQ G G EAL L++ +L +    P+ I F AVL+AC H G +DE  EYFN M+  
Sbjct: 418 MIKGYAQHGHGTEALLLYQRML-DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 477

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           + ++P+ +HY+C+IDL  R G +E+A++ ++ MPY+   V   +LLGAC+ H  + L   
Sbjct: 478 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAER 537

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A+ L+ M P  A PY+ LA++ A A  W ++  +RK M+ KR+RK  G SWIE+ KK H
Sbjct: 538 AANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKH 597

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMK 208
           VF   D +HP   E+   L+++   MK
Sbjct: 598 VFVAEDWSHPMIREVNEYLEEMMKKMK 623

[Close]
BLAST of Csa1G089470 vs. TrEMBL
Match: A0A0A0LSJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G089470 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 7.3e-125
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE
Sbjct: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE
Sbjct: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
           VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH
Sbjct: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC 223
           VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC
Sbjct: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC 222

[Close]
BLAST of Csa1G089470 vs. TrEMBL
Match: A0A0B2R406_GLYSO (Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_031026 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 126/202 (62.38%), Postives = 160/202 (79.21%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +A CGRG EAL+LF+ LLT+   +PDHICFTAVLTACNHAG LD+ VEYFNKM   
Sbjct: 285 MIMGYAHCGRGSEALELFDCLLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMTTY 344

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y L P ID YACLIDLYARNGN+ KA+ +ME+MPY  NYV+  S L +CK++ +V+LGRE
Sbjct: 345 YGLSPDIDQYACLIDLYARNGNLSKARNLMEEMPYVPNYVIWSSFLSSCKIYGDVKLGRE 404

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A +LI+M+P NAAPYLTLAHI AK GLW +V E+R+ +Q+KR+RK AGWSW+E+DKK H
Sbjct: 405 AADQLIKMEPCNAAPYLTLAHIYAKDGLWNEVAEVRRLIQRKRIRKPAGWSWVEVDKKFH 464

Query: 181 VFSVGDAAHPKSCEIYSKLDQL 203
           +F+V D  H +S EIY+ L+++
Sbjct: 465 IFAVDDVTHQRSNEIYAGLEKI 486

[Close]
BLAST of Csa1G089470 vs. TrEMBL
Match: I1KI78_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 126/202 (62.38%), Postives = 160/202 (79.21%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +A CGRG EAL+LF+ LLT+   +PDHICFTAVLTACNHAG LD+ VEYFNKM   
Sbjct: 329 MIMGYAHCGRGSEALELFDCLLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMTTY 388

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y L P ID YACLIDLYARNGN+ KA+ +ME+MPY  NYV+  S L +CK++ +V+LGRE
Sbjct: 389 YGLSPDIDQYACLIDLYARNGNLSKARNLMEEMPYVPNYVIWSSFLSSCKIYGDVKLGRE 448

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A +LI+M+P NAAPYLTLAHI AK GLW +V E+R+ +Q+KR+RK AGWSW+E+DKK H
Sbjct: 449 AADQLIKMEPCNAAPYLTLAHIYAKDGLWNEVAEVRRLIQRKRIRKPAGWSWVEVDKKFH 508

Query: 181 VFSVGDAAHPKSCEIYSKLDQL 203
           +F+V D  H +S EIY+ L+++
Sbjct: 509 IFAVDDVTHQRSNEIYAGLEKI 530

[Close]
BLAST of Csa1G089470 vs. TrEMBL
Match: A5ATH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026465 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 9.7e-69
Identity = 123/207 (59.42%), Postives = 162/207 (78.26%), Query Frame = 1 

Query: 1    MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
            MIT +AQ GRG E L LFE L+ E+ F PDHICFTAVLTACNHAG LD+ ++YFN+MRR+
Sbjct: 1591 MITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRD 1650

Query: 61   YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
            Y L P +D YACL+DLY RNG++ KAK++ME  P E N V+  S L +CK++ E ELGRE
Sbjct: 1651 YGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGRE 1710

Query: 121  VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
             A +L +M+P + APY+ +A I A+AGLW++V EIRK M+QK +RKSAGWSW+E+DK+ H
Sbjct: 1711 AADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVH 1770

Query: 181  VFSVGDAAHPKSCEIYSKLDQLNLDMK 208
            VF V DA+HP+S +I  +L++LNL+MK
Sbjct: 1771 VFXVADASHPRSRDICVELERLNLEMK 1797

[Close]
BLAST of Csa1G089470 vs. TrEMBL
Match: A0A151SUG0_CAJCA (Pentatricopeptide repeat-containing protein At4g37170 family OS=Cajanus cajan GN=KK1_013823 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.9e-64
Identity = 114/177 (64.41%), Postives = 142/177 (80.23%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +AQCGRG EAL+LF+ LL +   +PDHI FTAVLTACNHAG LD+ VEYFNKM   
Sbjct: 171 MIMGYAQCGRGSEALELFDCLLIKQELIPDHISFTAVLTACNHAGFLDKGVEYFNKMTTN 230

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y L P ID YACLIDLYARNGN+ KA+ +ME+MPY+ NYV+  S L +CK++ +VELG+E
Sbjct: 231 YGLSPNIDQYACLIDLYARNGNLSKARDLMEEMPYDPNYVIWSSFLNSCKIYGDVELGKE 290

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDK 178
            A +LI+ DP NAAPYLTLAHI A+ GLW +V E+R+ M+Q+R+RKSAGWSW+E+DK
Sbjct: 291 AADQLIKKDPCNAAPYLTLAHIYARKGLWNEVAEMRRLMRQRRIRKSAGWSWVEVDK 347

[Close]
BLAST of Csa1G089470 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-48
Identity = 94/214 (43.93%), Postives = 136/214 (63.55%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  FAQ G G EAL+LF  +L E    PDHI    VL+AC HAG ++E   YF+ M R+
Sbjct: 464 MIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 523

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           + + P  DHY C++DL  R G +E+AK M+E+MP + + V+  SLL ACKVH  + LG+ 
Sbjct: 524 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKY 583

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
           VA +L+E++PSN+ PY+ L+++ A+ G W  V  +RK M+++ V K  G SWI+I    H
Sbjct: 584 VAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDH 643

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSK 215
           VF V D +HP+  +I+S LD L  +M+  +  ++
Sbjct: 644 VFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTE 676


HSP 2 Score: 40.8 bits (94), Expect = 1.3e-03
Identity = 29/113 (25.66%), Postives = 56/113 (49.56%), Query Frame = 1 

Query: 20  SLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRREYHLDPQIDHYACLIDLYAR 79
           SL+ +  F+ D    +A++   +  G +++A   F++M      D  +  +  LI  + +
Sbjct: 176 SLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-----DRNVVSWNSLITCFEQ 235

Query: 80  NGNVEKAK---QMMEQMPYESNYVVLCSLLGACKVHAEVELGREVAHRLIEMD 130
           NG   +A    QMM +   E + V L S++ AC   + +++G+EV  R+++ D
Sbjct: 236 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283

[Close]
BLAST of Csa1G089470 vs. TAIR10
Match: AT3G02330.1 (AT3G02330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 4.2e-47
Identity = 85/222 (38.29%), Postives = 145/222 (65.32%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +A  G+G EA++LFE ++ E+   P+H+ F ++L AC H GL+D+ +EYF  M+R+
Sbjct: 675 MICGYAHHGKGEEAIQLFERMILEN-IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 734

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHA-EVELGR 120
           Y LDPQ+ HY+ ++D+  ++G V++A +++ +MP+E++ V+  +LLG C +H   VE+  
Sbjct: 735 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 794

Query: 121 EVAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKT 180
           E    L+ +DP +++ Y  L+++ A AG+W +V ++R+ M+  +++K  G SW+E+  + 
Sbjct: 795 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDEL 854

Query: 181 HVFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVE 222
           HVF VGD AHP+  EIY +L  +  +MK  + SS     +VE
Sbjct: 855 HVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVE 895

[Close]
BLAST of Csa1G089470 vs. TAIR10
Match: AT4G02750.1 (AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 4.6e-46
Identity = 93/223 (41.70%), Postives = 136/223 (60.99%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +++ G G  AL+ FES+  E    PD     AVL+AC+H GL+D+  +YF  M ++
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 540

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y + P   HYAC++DL  R G +E A  +M+ MP+E +  +  +LLGA +VH   EL   
Sbjct: 541 YGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAET 600

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A ++  M+P N+  Y+ L+++ A +G W  VG++R  M+ K V+K  G+SWIEI  KTH
Sbjct: 601 AADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTH 660

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSK--ALEYDVE 222
            FSVGD  HP+  EI++ L++L+L MK A   SK   + +DVE
Sbjct: 661 TFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702


HSP 2 Score: 35.0 bits (79), Expect = 7.0e-02
Identity = 20/60 (33.33%), Postives = 30/60 (50.00%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MIT +AQCG+  EA  LF+ +   D      + + A++   + +G   EA+  F +M RE
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDP-----VSWAAMIAGYSQSGHSFEALRLFVQMERE 403

[Close]
BLAST of Csa1G089470 vs. TAIR10
Match: AT2G22070.1 (AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 181.4 bits (459), Expect = 6.1e-46
Identity = 85/202 (42.08%), Postives = 128/202 (63.37%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI A AQ G   EAL+LFE++L E    PDHI +  V +AC HAGL+++  +YF+ M+  
Sbjct: 486 MIIALAQHGHAEEALELFETMLME-GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 545

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
             + P + HYAC++DL+ R G +++A++ +E+MP E + V   SLL AC+VH  ++LG+ 
Sbjct: 546 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 605

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A RL+ ++P N+  Y  LA++ +  G W +  +IRK M+  RV+K  G+SWIE+  K H
Sbjct: 606 AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 665

Query: 181 VFSVGDAAHPKSCEIYSKLDQL 203
           VF V D  HP+  EIY  + ++
Sbjct: 666 VFGVEDGTHPEKNEIYMTMKKI 686


HSP 2 Score: 40.8 bits (94), Expect = 1.3e-03
Identity = 29/96 (30.21%), Postives = 42/96 (43.75%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI+ F Q G  L AL +F  +L +    PD     +VL+AC +   L        K    
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKL-----CIGKQIHS 308

Query: 61  YHLDPQIDHYA----CLIDLYARNGNVEKAKQMMEQ 93
           + +    D        LI +Y+R G VE A++++EQ
Sbjct: 309 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339

[Close]
BLAST of Csa1G089470 vs. TAIR10
Match: AT3G49710.1 (AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.3e-45
Identity = 86/207 (41.55%), Postives = 126/207 (60.87%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +AQ G G EAL L++ +L +    P+ I F AVL+AC H G +DE  EYFN M+  
Sbjct: 418 MIKGYAQHGHGTEALLLYQRML-DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 477

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           + ++P+ +HY+C+IDL  R G +E+A++ ++ MPY+   V   +LLGAC+ H  + L   
Sbjct: 478 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAER 537

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A+ L+ M P  A PY+ LA++ A A  W ++  +RK M+ KR+RK  G SWIE+ KK H
Sbjct: 538 AANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKH 597

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMK 208
           VF   D +HP   E+   L+++   MK
Sbjct: 598 VFVAEDWSHPMIREVNEYLEEMMKKMK 623

[Close]
BLAST of Csa1G089470 vs. NCBI nr
Match: gi|778658982|ref|XP_011653616.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE
Sbjct: 287 MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 346

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE
Sbjct: 347 YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 406

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
           VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH
Sbjct: 407 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 466

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC 223
           VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC
Sbjct: 467 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC 508

[Close]
BLAST of Csa1G089470 vs. NCBI nr
Match: gi|700209662|gb|KGN64758.1| (hypothetical protein Csa_1G089470 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE
Sbjct: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE
Sbjct: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
           VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH
Sbjct: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC 223
           VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC
Sbjct: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC 222

[Close]
BLAST of Csa1G089470 vs. NCBI nr
Match: gi|659072298|ref|XP_008464861.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 6.2e-117
Identity = 210/222 (94.59%), Postives = 213/222 (95.95%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI AFAQCGRGLEALKLFE L TEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMR E
Sbjct: 287 MIMAFAQCGRGLEALKLFECLSTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRCE 346

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y LDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYV+ CSLLGACKVHAEVELGRE
Sbjct: 347 YQLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVMWCSLLGACKVHAEVELGRE 406

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
           VA+RLIEMDP NAAPYLTLAHI A+AGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH
Sbjct: 407 VAYRLIEMDPRNAAPYLTLAHIYARAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 466

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALEYDVEC 223
           VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQS KALEYDVEC
Sbjct: 467 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSPKALEYDVEC 508

[Close]
BLAST of Csa1G089470 vs. NCBI nr
Match: gi|1009145621|ref|XP_015890433.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujuba])

HSP 1 Score: 292.4 bits (747), Expect = 6.9e-76
Identity = 132/217 (60.83%), Postives = 172/217 (79.26%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MI  +AQ GRGL+AL+LFE    E+ F PDHICFTAVLTACNHAGLL+  V+YFN+MR++
Sbjct: 285 MIMGYAQSGRGLDALELFEHAKAEERFTPDHICFTAVLTACNHAGLLERGVDYFNQMRQD 344

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y L P++D YACL+DLYARNG + KAK+++++MPY+ NYV+  S L +CK+  EV+L RE
Sbjct: 345 YGLVPELDQYACLVDLYARNGRLRKAKELIKEMPYKPNYVMWTSFLSSCKIDGEVDLARE 404

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A +LIEMDPSNAAPY+TL+HI A+AGLW +V E+RK MQQK +RKSAGWSW+E+DK  H
Sbjct: 405 AAQKLIEMDPSNAAPYVTLSHIYARAGLWDEVAEVRKSMQQKAIRKSAGWSWVEVDKVVH 464

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNLDMKAAEQSSKALE 218
           VFSV D AHP + +IY +L++LN++MK      K +E
Sbjct: 465 VFSVSDIAHPCTGDIYVELEKLNMEMKETSYMLKQIE 501

[Close]
BLAST of Csa1G089470 vs. NCBI nr
Match: gi|1009145621|ref|XP_015890433.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujuba])

HSP 1 Score: 38.9 bits (89), Expect = 1.4e+01
Identity = 23/98 (23.47%), Postives = 48/98 (48.98%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           +IT F+Q G G+EA+ +F+++L+ +   P+   + +V++AC       + V   +     
Sbjct: 82  IITGFSQNGHGIEAISMFKAMLSTE-IKPNSFTYVSVISACTRLTGALKQVSLLHAHVMR 141

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESN 99
              D      + LID Y++ G +++A  +  +     N
Sbjct: 142 LGFDENSFVVSTLIDCYSKWGAMDQAALLFSETADRDN 178


HSP 2 Score: 281.2 bits (718), Expect = 1.6e-72
Identity = 126/204 (61.76%), Postives = 162/204 (79.41%), Query Frame = 1 

Query: 1   MITAFAQCGRGLEALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRRE 60
           MITA+A CGRGLEAL+LF+ LL E  F+PDH+CFTA+LTACNHAG L + VEYFNKM  +
Sbjct: 287 MITAYACCGRGLEALELFDHLLVEKEFIPDHVCFTAILTACNHAGFLHKGVEYFNKMSTD 346

Query: 61  YHLDPQIDHYACLIDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGRE 120
           Y L P ID YACLIDLYARNGN+ +A+++M +MPY+ N V+  S L +CK+H +VELGRE
Sbjct: 347 YQLSPDIDQYACLIDLYARNGNLRRARELMVEMPYDPNNVIWSSFLNSCKIHGDVELGRE 406

Query: 121 VAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTH 180
            A +LI+M+P NAAPYL+LA I  K GLW +V E+R  MQ++R+RK AGWSWIE+DKK H
Sbjct: 407 AADQLIKMEPCNAAPYLSLAQIYVKKGLWNKVAEVRSLMQRRRIRKPAGWSWIEVDKKLH 466

Query: 181 VFSVGDAAHPKSCEIYSKLDQLNL 205
           VF+V D  H +S EIY++L+++ L
Sbjct: 467 VFAVDDVTHQQSIEIYAELEKIYL 490

The following BLAST results are available for this feature:
BLAST of Csa1G089470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP151_ARATH3.0e-4743.93Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP207_ARATH7.4e-4638.29Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN... [more]
PP301_ARATH8.2e-4541.70Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN... [more]
PP168_ARATH1.1e-4442.08Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN... [more]
PP274_ARATH4.1e-4441.55Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN... [more]
BLAST of Csa1G089470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSJ5_CUCSA7.3e-125100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G089470 PE=4 SV=1[more]
A0A0B2R406_GLYSO3.2e-7262.38Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_031026 PE... [more]
I1KI78_SOYBN3.2e-7262.38Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2[more]
A5ATH6_VITVI9.7e-6959.42Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026465 PE=3 SV=1[more]
A0A151SUG0_CAJCA1.9e-6464.41Pentatricopeptide repeat-containing protein At4g37170 family OS=Cajanus cajan GN... [more]
BLAST of Csa1G089470 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G13600.11.7e-4843.93 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G02330.14.2e-4738.29 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G02750.14.6e-4641.70 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G22070.16.1e-4642.08 pentatricopeptide (PPR) repeat-containing protein[more]
AT3G49710.12.3e-4541.55 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Csa1G089470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778658982|ref|XP_011653616.1|1.1e-124100.00PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis s... [more]
gi|700209662|gb|KGN64758.1|1.1e-124100.00hypothetical protein Csa_1G089470 [Cucumis sativus][more]
gi|659072298|ref|XP_008464861.1|6.2e-11794.59PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m... [more]
gi|1009145621|ref|XP_015890433.1|6.9e-7660.83PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujub... [more]
gi|1009145621|ref|XP_015890433.1|1.4e+0123.47PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujub... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0080156 mitochondrial mRNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005515 protein binding
molecular_function GO:0043167 ion binding
molecular_function GO:0017111 nucleoside-triphosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G089470.1Csa1G089470.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 33..60
score: 3.1E-5coord: 1..22
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 68..93
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 70..93
score: 7.6E-6coord: 32..60
score: 8.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 132..166
score: 6.73coord: 1..29
score: 7.289coord: 66..96
score: 8.111coord: 30..60
score:
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 190..202
score: 2.6E-10coord: 4..140
score: 2.6
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 4..151
score: 8.7
NoneNo IPR availableunknownCoilCoilcoord: 199..219
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..173
score: 1.9E

Synteny