Cla005056 (gene) Watermelon (97103) v1

NameCla005056
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat protein 65 (AHRD V1 ***- F5CAD8_FUNHY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr3 : 2645694 .. 2647220 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCAGCTTAGGAGCAAAATTGACCAAGTATTCTCTATGCTCTGCTCTTAATTCTTGTGCTAAAACACATAATTTGTTCTTGGGTTTGCAAATTCATGCTCAGATTGTCAAAATTGGACTTGAAGAGAACTTATTTTTGAACAGTTCACTTGTTGATTTATATTCCAAATGTAATGCCATTGTGAATGCCAAAAGAGTGTTCTCTCATATGAAGACTCATGACCAAGTATCTTGGACTTCTATAATATCTGGGCTCTCCCAAAATGGGCATGGTAATGAAGGCATCCTAATGTTCAAGAATATGTTGGTAACTCAGGTTAGACCCAACTGTTTTACTTATGCCACTGTTATTAGTTCATGCCCAACTTTGAAGGATGAACTTCAGATTCGTCTCGCAACTTTGCTTCATGCTCATGTTATCAAACTTGGTTTTAGTTTTAGTAGTTTTGTAATTAGCTCTACTATTGATTGTTACTCTAAACTAGGAAGAATACAAGAAGCTGCTCTGCTCTTTTATGAGACAAGTGTGAAGGATAATATCATATACAATTCTATGATATCAGGGTATTCTCAGAATTTGTATGGGGAAGAGGCATTAAAACTGTTTGTAGAAATGAGAGCTAGTAATTTGAGCCCAACTGATCATACATTAACTAGTGTTTTAAATGCTTGTGGGTGTCTAACAGTACTTGAACAAGGAAGGCAACTTCACTCTCTAGTTACAAAAATGGGATCAGAAAGTAATGTGTTTGTAGTCTGTTCATTGCTAGATATGTACTCGAAGTGTGGCAGTGTCGATGAAGCATTTTATTTATTCAATCAGACAGTAGAAAAGAACAGTGTGTTGTCGACGTCGATGATAATGGCTTTTGCTCAATGTGGTAGAGGCTCAGAAGCATTAAAGCTGTTTGAGAGTTTGTTGTCTGAAGAAGGTTTCTTGCCTGACCATGTCTGTTTTACTGCAGTTCTAACTGCCTGCAATCATGCGGGATTACTAAATGAGGCAGTTGAATATTTCAATAAAATGAGCTGTGAATACAGATTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGACCTCTATGCCAGAAATGGGAATGTAGAGAAAGCCAAGCAGTTGATGGAGCAAATGCCTTACGAATCTAATTACGTAATGTGGTGTTCCCTCTTAGGTGCTTGCAAAGTTCATGAAGAGGTCGAGCTTGGGAAGGAGGTGGCATATCGACTCATCGAGATGGATCCAAGTAATGCTGCACCGTACGTAACCCTTGCTCATATCTATGCCAGAACTGGTTTATGGACACAGTTGGGTGAGATTAGAAGACAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAACTCATGTCTTCTCAGTTGCTGATGCTGCTCATCCTAAATCATGTGAGATTTATTCAAAACTTGATCAACTGAATTTGGATATGAAAGCAGCTGAACATGCATCAAAAGCACTTGAATATGATGTTGAGTGTTGA

mRNA sequence

ATGTGCAGCTTAGGAGCAAAATTGACCAAGTATTCTCTATGCTCTGCTCTTAATTCTTGTGCTAAAACACATAATTTGTTCTTGGGTTTGCAAATTCATGCTCAGATTGTCAAAATTGGACTTGAAGAGAACTTATTTTTGAACAGTTCACTTGTTGATTTATATTCCAAATGTAATGCCATTGTGAATGCCAAAAGAGTGTTCTCTCATATGAAGACTCATGACCAAGTATCTTGGACTTCTATAATATCTGGGCTCTCCCAAAATGGGCATGGTAATGAAGGCATCCTAATGTTCAAGAATATGTTGGTAACTCAGGTTAGACCCAACTGTTTTACTTATGCCACTGTTATTAGTTCATGCCCAACTTTGAAGGATGAACTTCAGATTCGTCTCGCAACTTTGCTTCATGCTCATGTTATCAAACTTGGTTTTAGTTTTAGTAGTTTTGTAATTAGCTCTACTATTGATTGTTACTCTAAACTAGGAAGAATACAAGAAGCTGCTCTGCTCTTTTATGAGACAAGTGTGAAGGATAATATCATATACAATTCTATGATATCAGGGTATTCTCAGAATTTGTATGGGGAAGAGGCATTAAAACTGTTTGTAGAAATGAGAGCTAGTAATTTGAGCCCAACTGATCATACATTAACTAGTGTTTTAAATGCTTGTGGGTGTCTAACAGTACTTGAACAAGGAAGGCAACTTCACTCTCTAGTTACAAAAATGGGATCAGAAAGTAATGTGTTTGTAGTCTGTTCATTGCTAGATATGTACTCGAAGTGTGGCAGTGTCGATGAAGCATTTTATTTATTCAATCAGACAGTAGAAAAGAACAGTGTGTTGTCGACGTCGATGATAATGGCTTTTGCTCAATGTGGTAGAGGCTCAGAAGCATTAAAGCTGTTTGAGAGTTTGTTGTCTGAAGAAGGTTTCTTGCCTGACCATGTCTGTTTTACTGCAGTTCTAACTGCCTGCAATCATGCGGGATTACTAAATGAGGCAGTTGAATATTTCAATAAAATGAGCTGTGAATACAGATTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGACCTCTATGCCAGAAATGGGAATGTAGAGAAAGCCAAGCAGTTGATGGAGCAAATGCCTTACGAATCTAATTACGTAATGTGGTGTTCCCTCTTAGGTGCTTGCAAAGTTCATGAAGAGGTCGAGCTTGGGAAGGAGGTGGCATATCGACTCATCGAGATGGATCCAAGTAATGCTGCACCGTACGTAACCCTTGCTCATATCTATGCCAGAACTGGTTTATGGACACAGTTGGGTGAGATTAGAAGACAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAACTCATGTCTTCTCAGTTGCTGATGCTGCTCATCCTAAATCATGTGAGATTTATTCAAAACTTGATCAACTGAATTTGGATATGAAAGCAGCTGAACATGCATCAAAAGCACTTGAATATGATGTTGAGTGTTGA

Coding sequence (CDS)

ATGTGCAGCTTAGGAGCAAAATTGACCAAGTATTCTCTATGCTCTGCTCTTAATTCTTGTGCTAAAACACATAATTTGTTCTTGGGTTTGCAAATTCATGCTCAGATTGTCAAAATTGGACTTGAAGAGAACTTATTTTTGAACAGTTCACTTGTTGATTTATATTCCAAATGTAATGCCATTGTGAATGCCAAAAGAGTGTTCTCTCATATGAAGACTCATGACCAAGTATCTTGGACTTCTATAATATCTGGGCTCTCCCAAAATGGGCATGGTAATGAAGGCATCCTAATGTTCAAGAATATGTTGGTAACTCAGGTTAGACCCAACTGTTTTACTTATGCCACTGTTATTAGTTCATGCCCAACTTTGAAGGATGAACTTCAGATTCGTCTCGCAACTTTGCTTCATGCTCATGTTATCAAACTTGGTTTTAGTTTTAGTAGTTTTGTAATTAGCTCTACTATTGATTGTTACTCTAAACTAGGAAGAATACAAGAAGCTGCTCTGCTCTTTTATGAGACAAGTGTGAAGGATAATATCATATACAATTCTATGATATCAGGGTATTCTCAGAATTTGTATGGGGAAGAGGCATTAAAACTGTTTGTAGAAATGAGAGCTAGTAATTTGAGCCCAACTGATCATACATTAACTAGTGTTTTAAATGCTTGTGGGTGTCTAACAGTACTTGAACAAGGAAGGCAACTTCACTCTCTAGTTACAAAAATGGGATCAGAAAGTAATGTGTTTGTAGTCTGTTCATTGCTAGATATGTACTCGAAGTGTGGCAGTGTCGATGAAGCATTTTATTTATTCAATCAGACAGTAGAAAAGAACAGTGTGTTGTCGACGTCGATGATAATGGCTTTTGCTCAATGTGGTAGAGGCTCAGAAGCATTAAAGCTGTTTGAGAGTTTGTTGTCTGAAGAAGGTTTCTTGCCTGACCATGTCTGTTTTACTGCAGTTCTAACTGCCTGCAATCATGCGGGATTACTAAATGAGGCAGTTGAATATTTCAATAAAATGAGCTGTGAATACAGATTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGACCTCTATGCCAGAAATGGGAATGTAGAGAAAGCCAAGCAGTTGATGGAGCAAATGCCTTACGAATCTAATTACGTAATGTGGTGTTCCCTCTTAGGTGCTTGCAAAGTTCATGAAGAGGTCGAGCTTGGGAAGGAGGTGGCATATCGACTCATCGAGATGGATCCAAGTAATGCTGCACCGTACGTAACCCTTGCTCATATCTATGCCAGAACTGGTTTATGGACACAGTTGGGTGAGATTAGAAGACAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGTTGGATTGAGATAGATAAGAAAACTCATGTCTTCTCAGTTGCTGATGCTGCTCATCCTAAATCATGTGAGATTTATTCAAAACTTGATCAACTGAATTTGGATATGAAAGCAGCTGAACATGCATCAAAAGCACTTGAATATGATGTTGAGTGTTGA

Protein sequence

MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCEIYSKLDQLNLDMKAAEHASKALEYDVEC
BLAST of Cla005056 vs. Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-91
Identity = 176/528 (33.33%), Postives = 301/528 (57.01%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
           + S G    + SL     +CA    L  GLQI+   +K  L  ++ + ++ +D+Y KC A
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432

Query: 61  IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
           +  A RVF  M+  D VSW +II+   QNG G E + +F +ML +++ P+ FT+ +++ +
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492

Query: 121 CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEA----ALLFYETS 180
           C        +     +H+ ++K G + +S V  S ID YSK G I+EA    +  F   +
Sbjct: 493 C----TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 552

Query: 181 VKDN----------------IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTS 240
           V                   + +NS+ISGY      E+A  LF  M    ++P   T  +
Sbjct: 553 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 612

Query: 241 VLNACGCLTVLEQGRQLHSLVTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKN 300
           VL+ C  L     G+Q+H+ V K   +S+V++  +L+DMYSKCG + ++  +F +++ ++
Sbjct: 613 VLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD 672

Query: 301 SVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYF 360
            V   +MI  +A  G+G EA++LFE ++  E   P+HV F ++L AC H GL+++ +EYF
Sbjct: 673 FVTWNAMICGYAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACAHMGLIDKGLEYF 732

Query: 361 NKMSCEYRLDPQIDHYACLIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVH-E 420
             M  +Y LDPQ+ HY+ ++D+  ++G V++A +L+ +MP+E++ V+W +LLG C +H  
Sbjct: 733 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 792

Query: 421 EVELGKEVAYRLIEMDPSNAAPYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWI 480
            VE+ +E    L+ +DP +++ Y  L+++YA  G+W ++ ++RR M+  +++K  G SW+
Sbjct: 793 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 852

Query: 481 EIDKKTHVFSVADAAHPKSCEIYSKLDQLNLDMKAAEHASKALEYDVE 508
           E+  + HVF V D AHP+  EIY +L  +  +MK  + +S     +VE
Sbjct: 853 ELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVE 895


HSP 2 Score: 189.5 bits (480), Expect = 9.0e-47
Identity = 126/417 (30.22%), Postives = 214/417 (51.32%), Query Frame = 1

Query: 17  LNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRVFSHMKTHDQ 76
           L  C+   +  LG+QIH  +V++G + ++   S+L+D+Y+K    V + RVF  +   + 
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS 246

Query: 77  VSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKDELQIRLATLL 136
           VSW++II+G  QN   +  +  FK M       +   YA+V+ SC  L +   +RL   L
Sbjct: 247 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE---LRLGGQL 306

Query: 137 HAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSMISGYSQNLYG 196
           HAH +K  F+    V ++T+D Y+K   +Q+A +LF  +   +   YN+MI+GYSQ  +G
Sbjct: 307 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 366

Query: 197 EEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSESNVFVVCSL 256
            +AL LF  + +S L   + +L+ V  AC  +  L +G Q++ L  K     +V V  + 
Sbjct: 367 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 426

Query: 257 LDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPD 316
           +DMY KC ++ EAF +F++   +++V   ++I A  Q G+G E L LF S+L      PD
Sbjct: 427 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPD 486

Query: 317 HVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARNGNVEKAKQL- 376
              F ++L AC   G L   +E  + +  +  +         LID+Y++ G +E+A+++ 
Sbjct: 487 EFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 546

Query: 377 ------------MEQMPYESN------YVMWCSLLGACKVHEEVELGKEVAYRLIEM 415
                       ME++    N       V W S++    + E+ E  + +  R++EM
Sbjct: 547 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597


HSP 3 Score: 162.9 bits (411), Expect = 9.0e-39
Identity = 120/457 (26.26%), Postives = 222/457 (48.58%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
           M  + A +++    S L SCA    L LG Q+HA  +K     +  + ++ +D+Y+KC+ 
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 331

Query: 61  IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
           + +A+ +F + +  ++ S+ ++I+G SQ  HG + +L+F  ++ + +  +  + + V  +
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391

Query: 121 CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDN 180
           C  +K    +     ++   IK   S    V ++ ID Y K   + EA  +F E   +D 
Sbjct: 392 CALVKG---LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA 451

Query: 181 IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSL 240
           + +N++I+ + QN  G E L LFV M  S + P + T  S+L AC   + L  G ++HS 
Sbjct: 452 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSS 511

Query: 241 VTKMGSESNVFVVCSLLDMYSKCGSVDEA------FY--------------LFNQTVEKN 300
           + K G  SN  V CSL+DMYSKCG ++EA      F+              + N+ +++ 
Sbjct: 512 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 571

Query: 301 SVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYF 360
            V   S+I  +    +  +A  LF  ++ E G  PD   +  VL  C +        +  
Sbjct: 572 CVSWNSIISGYVMKEQSEDAQMLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIH 631

Query: 361 NKMSCEYRLDPQIDHYAC--LIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVH 420
            ++    + + Q D Y C  L+D+Y++ G++  ++ LM +     ++V W +++     H
Sbjct: 632 AQV---IKKELQSDVYICSTLVDMYSKCGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHH 691

Query: 421 EEVELGKEVAYRLI-EMDPSNAAPYVTLAHIYARTGL 435
            + E   ++  R+I E    N   ++++    A  GL
Sbjct: 692 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGL 719


HSP 4 Score: 141.7 bits (356), Expect = 2.2e-32
Identity = 103/373 (27.61%), Postives = 180/373 (48.26%), Query Frame = 1

Query: 49  SSLVDLYSKCNAIVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVR 108
           + +++ YSK N +  A   F+ M   D VSW S++SG  QNG   + I +F +M    + 
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177

Query: 109 PNCFTYATVISSCPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEA 168
            +  T+A ++  C  L+D     L   +H  V+++G        S+ +D Y+K  R  E+
Sbjct: 178 FDGRTFAIILKVCSFLEDT---SLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 237

Query: 169 ALLFYETSVKDNIIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCL 228
             +F     K+++ ++++I+G  QN     ALK F EM+  N   +     SVL +C  L
Sbjct: 238 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 297

Query: 229 TVLEQGRQLHSLVTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMI 288
           + L  G QLH+   K    ++  V  + LDMY+KC ++ +A  LF+ +   N     +MI
Sbjct: 298 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 357

Query: 289 MAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYR 348
             ++Q   G +AL LF  L+S  G   D +  + V  AC     L+E ++ +  ++ +  
Sbjct: 358 TGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYG-LAIKSS 417

Query: 349 LDPQIDHYACLIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVA 408
           L   +      ID+Y +   + +A ++ ++M    + V W +++ A   HE+   G E  
Sbjct: 418 LSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAA---HEQNGKGYETL 477

Query: 409 YRLIEMDPSNAAP 422
           +  + M  S   P
Sbjct: 478 FLFVSMLRSRIEP 481

BLAST of Cla005056 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 2.7e-91
Identity = 177/494 (35.83%), Postives = 293/494 (59.31%), Query Frame = 1

Query: 5   GAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA---I 64
           G +  K++L S  ++CA+  NL LG Q+H+  ++ GL +++    SLVD+Y+KC+A   +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSV 323

Query: 65  VNAKRVFSHMKTHDQVSWTSIISGLSQNGH-GNEGILMFKNMLVT-QVRPNCFTYATVIS 124
            + ++VF  M+ H  +SWT++I+G  +N +   E I +F  M+    V PN FT+++   
Sbjct: 324 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 383

Query: 125 SCPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKD 184
           +C  L D    R+   +     K G + +S V +S I  + K  R+++A   F   S K+
Sbjct: 384 ACGNLSDP---RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 443

Query: 185 NIIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHS 244
            + YN+ + G  +NL  E+A KL  E+    L  +  T  S+L+    +  + +G Q+HS
Sbjct: 444 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 503

Query: 245 LVTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSE 304
            V K+G   N  V  +L+ MYSKCGS+D A  +FN    +N +  TSMI  FA+ G    
Sbjct: 504 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIR 563

Query: 305 ALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACL 364
            L+ F  ++ EEG  P+ V + A+L+AC+H GL++E   +FN M  ++++ P+++HYAC+
Sbjct: 564 VLETFNQMI-EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 623

Query: 365 IDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNA 424
           +DL  R G +  A + +  MP++++ ++W + LGAC+VH   ELGK  A +++E+DP+  
Sbjct: 624 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 683

Query: 425 APYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSC 484
           A Y+ L++IYA  G W +  E+RR+M+++ + K  G SWIE+  K H F V D AHP + 
Sbjct: 684 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 743

Query: 485 EIYSKLDQLNLDMK 494
           +IY +LD+L  ++K
Sbjct: 744 QIYDELDRLITEIK 751


HSP 2 Score: 140.2 bits (352), Expect = 6.3e-32
Identity = 115/409 (28.12%), Postives = 201/409 (49.14%), Query Frame = 1

Query: 15  SALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRVFSHMKT- 74
           S L SC +  +  LG  +HA++++  +E +  L +SL+ LYSK      A+ VF  M+  
Sbjct: 67  SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126

Query: 75  --HDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKDELQIR 134
              D VSW+++++    NG   + I +F   L   + PN + Y  VI +C    D + + 
Sbjct: 127 GKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN-SDFVGVG 186

Query: 135 LATLLHAHVIKLGFSFSSFVIS-STIDCYSKLGRIQEAALLFYETSVKDNII-YNSMISG 194
             TL    ++K G   S   +  S ID + K     E A   ++   + N++ +  MI+ 
Sbjct: 187 RVTL--GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 246

Query: 195 YSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSESN 254
             Q  +  EA++ F++M  S       TL+SV +AC  L  L  G+QLHS   + G   +
Sbjct: 247 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 306

Query: 255 VFVVCSLLDMYSKC---GSVDEAFYLFNQTVEKNSVLS-TSMIMAFAQ-CGRGSEALKLF 314
             V CSL+DMY+KC   GSVD+   +F++ +E +SV+S T++I  + + C   +EA+ LF
Sbjct: 307 --VECSLVDMYAKCSADGSVDDCRKVFDR-MEDHSVMSWTALITGYMKNCNLATEAINLF 366

Query: 315 ESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYA 374
             ++++    P+H  F++   AC +        +   + + +  L         +I ++ 
Sbjct: 367 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ-AFKRGLASNSSVANSVISMFV 426

Query: 375 RNGNVEKAKQLMEQMPYESNYVMWCSLL-GACKVHEEVELGKEVAYRLI 413
           ++  +E A++  E +  E N V + + L G C+      L  E A++L+
Sbjct: 427 KSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR-----NLNFEQAFKLL 462


HSP 3 Score: 114.0 bits (284), Expect = 4.8e-24
Identity = 107/441 (24.26%), Postives = 196/441 (44.44%), Query Frame = 1

Query: 4   LGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIG-LEENLFLNSSLVDLYSKC-NAI 63
           LG     Y   + + +C+ +  + +G      ++K G  E ++ +  SL+D++ K  N+ 
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219

Query: 64  VNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSC 123
            NA +VF  M   + V+WT +I+   Q G   E I  F +M+++    + FT ++V S+C
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279

Query: 124 PTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKL---GRIQEAALLFYETSVK 183
             L++   + L   LH+  I+ G      V  S +D Y+K    G + +   +F      
Sbjct: 280 AELEN---LSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDH 339

Query: 184 DNIIYNSMISGYSQNL-YGEEALKLFVEM-RASNLSPTDHTLTSVLNACGCLTVLEQGRQ 243
             + + ++I+GY +N     EA+ LF EM    ++ P   T +S   ACG L+    G+Q
Sbjct: 340 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 399

Query: 244 LHSLVTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGR 303
           +     K G  SN  V  S++ M+ K   +++A   F    EKN V   + +    +   
Sbjct: 400 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 459

Query: 304 GSEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHY 363
             +A KL  S ++E         F ++L+   + G + +  +  +++    +L    +  
Sbjct: 460 FEQAFKLL-SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV---VKLGLSCNQP 519

Query: 364 AC--LIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEM 423
            C  LI +Y++ G+++ A ++   M    N + W S++     H       E   ++IE 
Sbjct: 520 VCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 579

Query: 424 D-PSNAAPYVTLAHIYARTGL 435
               N   YV +    +  GL
Sbjct: 580 GVKPNEVTYVAILSACSHVGL 590

BLAST of Cla005056 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.2e-88
Identity = 183/524 (34.92%), Postives = 296/524 (56.49%), Query Frame = 1

Query: 5   GAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNA 64
           G  L +YS  S L++C+  +++  G+Q+H+ I K     ++++ S+LVD+YSKC  + +A
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206

Query: 65  KRVFSHMKTHDQVSWTSIISGLSQNGHGNE----GILMFKNML----------------V 124
           +RVF  M   + VSW S+I+   QNG   E      +M ++ +                +
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266

Query: 125 TQVRPNCFTYATVISSCPTLKDELQIRLATLLHAHVIKLG---FSFSSFVI------SST 184
           + ++     +  V+ +     D +       ++A   ++    F F S  I      +S 
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326

Query: 185 IDCYSKLGRIQEAALLFYETSVKDNIIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTD 244
           I  Y+     + A L+F + + ++ + +N++I+GY+QN   EEAL LF  ++  ++ PT 
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386

Query: 245 HTLTSVLNACGCLTVLEQGRQLHSLVTK------MGSESNVFVVCSLLDMYSKCGSVDEA 304
           ++  ++L AC  L  L  G Q H  V K       G E ++FV  SL+DMY KCG V+E 
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446

Query: 305 FYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNH 364
           + +F + +E++ V   +MI+ FAQ G G+EAL+LF  +L E G  PDH+    VL+AC H
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGH 506

Query: 365 AGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARNGNVEKAKQLMEQMPYESNYVMWC 424
           AG + E   YF+ M+ ++ + P  DHY C++DL  R G +E+AK ++E+MP + + V+W 
Sbjct: 507 AGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWG 566

Query: 425 SLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYVTLAHIYARTGLWTQLGEIRRQMQQKR 484
           SLL ACKVH  + LGK VA +L+E++PSN+ PYV L+++YA  G W  +  +R+ M+++ 
Sbjct: 567 SLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEG 626

Query: 485 VRKSAGWSWIEIDKKTHVFSVADAAHPKSCEIYSKLDQLNLDMK 494
           V K  G SWI+I    HVF V D +HP+  +I+S LD L  +M+
Sbjct: 627 VTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669


HSP 2 Score: 132.9 bits (333), Expect = 1.0e-29
Identity = 83/300 (27.67%), Postives = 152/300 (50.67%), Query Frame = 1

Query: 42  EENLFLNSSLVDLYSKCNAIVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKN 101
           + N++  +S+V   +K   +  A  +F  M   DQ +W S++SG +Q+    E +  F  
Sbjct: 83  QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142

Query: 102 MLVTQVRPNCFTYATVISSCPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSK 161
           M       N +++A+V+S+C  L D   +     +H+ + K  F    ++ S+ +D YSK
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLND---MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 202

Query: 162 LGRIQEAALLFYETSVKDNIIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSV 221
            G + +A  +F E   ++ + +NS+I+ + QN    EAL +F  M  S + P + TL SV
Sbjct: 203 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 262

Query: 222 LNACGCLTVLEQGRQLHSLVTKMGSESNVFVVC-SLLDMYSKCGSVDEAFYLFNQTVEKN 281
           ++AC  L+ ++ G+++H  V K     N  ++  + +DMY+KC  + EA ++F+    +N
Sbjct: 263 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 322

Query: 282 SVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYF 341
            +  TSMI  +A     ++A +L  + ++E       V + A++      G   EA+  F
Sbjct: 323 VIAETSMISGYAMAA-STKAARLMFTKMAERNV----VSWNALIAGYTQNGENEEALSLF 374


HSP 3 Score: 126.7 bits (317), Expect = 7.2e-28
Identity = 74/228 (32.46%), Postives = 123/228 (53.95%), Query Frame = 1

Query: 153 SSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSMISGYSQNLYGEEALKLFVEMRASNLS 212
           +S +   +KLG + EA  LF     +D   +NSM+SG++Q+   EEAL  F  M      
Sbjct: 90  NSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV 149

Query: 213 PTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSESNVFVVCSLLDMYSKCGSVDEAFYL 272
             +++  SVL+AC  L  + +G Q+HSL+ K    S+V++  +L+DMYSKCG+V++A  +
Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRV 209

Query: 273 FNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGL 332
           F++  ++N V   S+I  F Q G   EAL +F+ +L E    PD V   +V++AC     
Sbjct: 210 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML-ESRVEPDEVTLASVISACASLSA 269

Query: 333 LNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARNGNVEKAKQLMEQMP 381
           +    E   ++    +L   I      +D+YA+   +++A+ + + MP
Sbjct: 270 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316


HSP 4 Score: 89.4 bits (220), Expect = 1.3e-16
Identity = 92/411 (22.38%), Postives = 185/411 (45.01%), Query Frame = 1

Query: 17  LNSCAKTHNLFLGLQ-IHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRVFSHMKTHD 76
           L+SC K+    + ++ +HA ++K G    +F+ + L+D YSKC ++ + ++VF  M   +
Sbjct: 26  LDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRN 85

Query: 77  QVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKDELQIRLATL 136
             +W S+++GL++ G  +E   +F++M     R  C T+ +++S      D  +  L   
Sbjct: 86  IYTWNSVVTGLTKLGFLDEADSLFRSM---PERDQC-TWNSMVSGF-AQHDRCEEALCYF 145

Query: 137 LHAHVIKLGFSFSSFVISSTIDCYSKLG----RIQEAALLFYETSVKDNIIYNSMISGYS 196
              H  K GF  + +  +S +   S L      +Q  +L+     + D  I ++++  YS
Sbjct: 146 AMMH--KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 205

Query: 197 QNLYGEEALKLFVEMRASNLSPTDHTLT------SVLNACGCLTVLEQGRQLHSLVTKMG 256
           +     +A ++F EM   N+   +  +T        + A     ++ + R     VT   
Sbjct: 206 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL-- 265

Query: 257 SESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFE 316
             ++V   C+ L    K G       + N  +  + +LS + +  +A+C R  EA  +F+
Sbjct: 266 --ASVISACASLSAI-KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 325

Query: 317 SLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYAR 376
           S+      + + +  T++++    A     A   F KM+     +  +  +  LI  Y +
Sbjct: 326 SMP-----IRNVIAETSMISGYAMAASTKAARLMFTKMA-----ERNVVSWNALIAGYTQ 385

Query: 377 NGNVEKAKQLMEQMPYES---NYVMWCSLLGACKVHEEVELGKEVAYRLIE 414
           NG  E+A  L   +  ES    +  + ++L AC    E+ LG +    +++
Sbjct: 386 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414


HSP 5 Score: 59.7 bits (143), Expect = 1.1e-07
Identity = 60/227 (26.43%), Postives = 107/227 (47.14%), Query Frame = 1

Query: 199 ALKLFVEMRASNLSPTDHT-LTSVLNAC--GCLTVLEQGRQLHSLVTKMGSESNVFVVCS 258
           A K F+++ A   S TD +    +L++C    L+ +   R +H+ V K G  + +F+   
Sbjct: 2   ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 61

Query: 259 LLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLSEE---- 318
           L+D YSKCGS+++   +F++  ++N     S++    + G   EA  LF S+   +    
Sbjct: 62  LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 121

Query: 319 -----GF-----LPDHVCFTA-------VLTACNHAGLLNEAVEYFNKMSCEYRLDPQI- 378
                GF       + +C+ A       VL   + A +L+ A    N M+   ++   I 
Sbjct: 122 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS-ACSGLNDMNKGVQVHSLIA 181

Query: 379 ------DHY--ACLIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLL 393
                 D Y  + L+D+Y++ GNV  A+++ ++M  + N V W SL+
Sbjct: 182 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLI 225

BLAST of Cla005056 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.4e-87
Identity = 170/489 (34.76%), Postives = 287/489 (58.69%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKR 66
           +L++ S  S +  CA    L    Q+H  +VK G   +  + ++L+  YSKC A+++A R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351

Query: 67  VFSHMK-THDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLK 126
           +F  +    + VSWT++ISG  QN    E + +F  M    VRPN FTY+ ++++ P + 
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411

Query: 127 DELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNS 186
                   + +HA V+K  +  SS V ++ +D Y KLG+++EAA +F     KD + +++
Sbjct: 412 P-------SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 471

Query: 187 MISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTV-LEQGRQLHSLVTKM 246
           M++GY+Q    E A+K+F E+    + P + T +S+LN C      + QG+Q H    K 
Sbjct: 472 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 531

Query: 247 GSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLF 306
             +S++ V  +LL MY+K G+++ A  +F +  EK+ V   SMI  +AQ G+  +AL +F
Sbjct: 532 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 591

Query: 307 ESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYA 366
           + +   +  + D V F  V  AC HAGL+ E  +YF+ M  + ++ P  +H +C++DLY+
Sbjct: 592 KEMKKRKVKM-DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 651

Query: 367 RNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYVT 426
           R G +EKA +++E MP  +   +W ++L AC+VH++ ELG+  A ++I M P ++A YV 
Sbjct: 652 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 711

Query: 427 LAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCEIYSK 486
           L+++YA +G W +  ++R+ M ++ V+K  G+SWIE+  KT+ F   D +HP   +IY K
Sbjct: 712 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 771

Query: 487 LDQLNLDMK 494
           L+ L+  +K
Sbjct: 772 LEDLSTRLK 772


HSP 2 Score: 194.1 bits (492), Expect = 3.7e-48
Identity = 125/416 (30.05%), Postives = 220/416 (52.88%), Query Frame = 1

Query: 5   GAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNA 64
           G +   ++  +AL   A+      GLQ+H  +VK GL++ + +++SL++LY KC  +  A
Sbjct: 189 GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA 248

Query: 65  KRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTL 124
           + +F   +    V+W S+ISG + NG   E + MF +M +  VR +  ++A+VI  C  L
Sbjct: 249 RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308

Query: 125 KDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNII-Y 184
           K   ++R    LH  V+K GF F   + ++ +  YSK   + +A  LF E     N++ +
Sbjct: 309 K---ELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 368

Query: 185 NSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTK 244
            +MISG+ QN   EEA+ LF EM+   + P + T + +L A   ++  E    +H+ V K
Sbjct: 369 TAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVK 428

Query: 245 MGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKL 304
              E +  V  +LLD Y K G V+EA  +F+   +K+ V  ++M+  +AQ G    A+K+
Sbjct: 429 TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKM 488

Query: 305 FESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLY 364
           F   L++ G  P+   F+++L  C          + F+  + + RLD  +   + L+ +Y
Sbjct: 489 FGE-LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 548

Query: 365 ARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVH----EEVELGKEVAYRLIEMD 416
           A+ GN+E A+++ ++   E + V W S++     H    + +++ KE+  R ++MD
Sbjct: 549 AKKGNIESAEEVFKRQ-REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595


HSP 3 Score: 164.9 bits (416), Expect = 2.4e-39
Identity = 117/400 (29.25%), Postives = 198/400 (49.50%), Query Frame = 1

Query: 4   LGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVN 63
           LG ++      S L   A   +   G Q+H Q +K G  +++ + +SLVD Y K +   +
Sbjct: 87  LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146

Query: 64  AKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPT 123
            ++VF  MK  + V+WT++ISG ++N   +E + +F  M     +PN FT+A  +     
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG---V 206

Query: 124 LKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIY 183
           L +E        +H  V+K G   +  V +S I+ Y K G +++A +LF +T VK  + +
Sbjct: 207 LAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTW 266

Query: 184 NSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTK 243
           NSMISGY+ N    EAL +F  MR + +  ++ +  SV+  C  L  L    QLH  V K
Sbjct: 267 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 326

Query: 244 MGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLS-TSMIMAFAQCGRGSEALK 303
            G   +  +  +L+  YSKC ++ +A  LF +     +V+S T+MI  F Q     EA+ 
Sbjct: 327 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 386

Query: 304 LFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDL 363
           LF S +  +G  P+   ++ +LTA     +++ +  +   +   Y     +     L+D 
Sbjct: 387 LF-SEMKRKGVRPNEFTYSVILTA---LPVISPSEVHAQVVKTNYERSSTVG--TALLDA 446

Query: 364 YARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVE 403
           Y + G VE+A ++   +  + + V W ++L       E E
Sbjct: 447 YVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476


HSP 4 Score: 123.6 bits (309), Expect = 6.1e-27
Identity = 98/367 (26.70%), Postives = 169/367 (46.05%), Query Frame = 1

Query: 61  IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
           + NA  +F      D+ S+ S++ G S++G   E   +F N+    +  +C  +++V+  
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 121 CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDN 180
             TL DEL       LH   IK GF     V +S +D Y K    ++   +F E   ++ 
Sbjct: 103 SATLCDEL---FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 162

Query: 181 IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSL 240
           + + ++ISGY++N   +E L LF+ M+     P   T  + L       V  +G Q+H++
Sbjct: 163 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 222

Query: 241 VTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEA 300
           V K G +  + V  SL+++Y KCG+V +A  LF++T  K+ V   SMI  +A  G   EA
Sbjct: 223 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 282

Query: 301 LKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCE-----YRLDPQIDH 360
           L +F S+      L +   F +V+  C +     + + +  ++ C      +  D  I  
Sbjct: 283 LGMFYSMRLNYVRLSES-SFASVIKLCANL----KELRFTEQLHCSVVKYGFLFDQNI-- 342

Query: 361 YACLIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLI-EM 420
              L+  Y++   +  A +L +++    N V W +++     ++    GKE A  L  EM
Sbjct: 343 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND----GKEEAVDLFSEM 395

Query: 421 DPSNAAP 422
                 P
Sbjct: 403 KRKGVRP 395

BLAST of Cla005056 vs. Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.3e-87
Identity = 168/496 (33.87%), Postives = 287/496 (57.86%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
           M   G K   Y+  S L SCA  H L  G Q+HA  +K  L  + ++ +SL+D+Y+KC+ 
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400

Query: 61  IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHG---NEGILMFKNMLVTQVRPNCFTYATV 120
           + +A++VF      D V + ++I G S+ G     +E + +F++M    +RP+  T+ ++
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460

Query: 121 ISSCPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSV 180
           + +  +L     + L+  +H  + K G +   F  S+ ID YS    ++++ L+F E  V
Sbjct: 461 LRASASLTS---LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV 520

Query: 181 KDNIIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQL 240
           KD +I+NSM +GY Q    EEAL LF+E++ S   P + T  +++ A G L  ++ G++ 
Sbjct: 521 KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 580

Query: 241 HSLVTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRG 300
           H  + K G E N ++  +LLDMY+KCGS ++A   F+    ++ V   S+I ++A  G G
Sbjct: 581 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 640

Query: 301 SEALKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYA 360
            +AL++ E ++S EG  P+++ F  VL+AC+HAGL+ + ++ F  M   + ++P+ +HY 
Sbjct: 641 KKALQMLEKMMS-EGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYV 700

Query: 361 CLIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPS 420
           C++ L  R G + KA++L+E+MP +   ++W SLL  C     VEL +  A   I  DP 
Sbjct: 701 CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPK 760

Query: 421 NAAPYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPK 480
           ++  +  L++IYA  G+WT+  ++R +M+ + V K  G SWI I+K+ H+F   D +H K
Sbjct: 761 DSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCK 820

Query: 481 SCEIYSKLDQLNLDMK 494
           + +IY  LD L + ++
Sbjct: 821 ANQIYEVLDDLLVQIR 831


HSP 2 Score: 180.6 bits (457), Expect = 4.2e-44
Identity = 125/424 (29.48%), Postives = 214/424 (50.47%), Query Frame = 1

Query: 11  YSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRVFSH 70
           Y L + L++C+    L  G QIHA I++ GLE +  L + L+D Y KC  ++ A ++F+ 
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309

Query: 71  MKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKDELQI 130
           M   + +SWT+++SG  QN    E + +F +M    ++P+ +  +++++SC +L     +
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH---AL 369

Query: 131 RLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSMISGY 190
              T +HA+ IK      S+V +S ID Y+K   + +A  +F   +  D +++N+MI GY
Sbjct: 370 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 429

Query: 191 SQ---NLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSE 250
           S+        EAL +F +MR   + P+  T  S+L A   LT L   +Q+H L+ K G  
Sbjct: 430 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLN 489

Query: 251 SNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLF-ES 310
            ++F   +L+D+YS C  + ++  +F++   K+ V+  SM   + Q     EAL LF E 
Sbjct: 490 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 549

Query: 311 LLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYF-NKMSCEYRLDPQIDHYACLIDLYAR 370
            LS E   PD   F  ++TA  +   +    E+    +      +P I +   L+D+YA+
Sbjct: 550 QLSRE--RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAK 609

Query: 371 NGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAP-YVT 429
            G+ E A +  +      + V W S++ +   H E   GK+    L +M      P Y+T
Sbjct: 610 CGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGE---GKKALQMLEKMMSEGIEPNYIT 662


HSP 3 Score: 157.9 bits (398), Expect = 2.9e-37
Identity = 113/392 (28.83%), Postives = 200/392 (51.02%), Query Frame = 1

Query: 32  IHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRVFSHMKTHDQVSWTSIISGLSQNGH 91
           +H QI+  GLE + +L++ L++LYS+   +V A++VF  M   + VSW++++S  + +G 
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 92  GNEGILMFKNMLVTQV-RPNCFTYATVISSCPTLKDELQIRLATLLHAHVIKLGFSFSSF 151
             E +++F     T+   PN +  ++ I +C  L D     +   L + ++K GF    +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGRGRWMVFQLQSFLVKSGFDRDVY 185

Query: 152 VISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSMISGYSQNLYGEEALKLFVEMRASN 211
           V +  ID Y K G I  A L+F     K  + + +MISG  +      +L+LF ++   N
Sbjct: 186 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 245

Query: 212 LSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSESNVFVVCSLLDMYSKCGSVDEAF 271
           + P  + L++VL+AC  L  LE G+Q+H+ + + G E +  ++  L+D Y KCG V  A 
Sbjct: 246 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 305

Query: 272 YLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLSEEGFLPDHVCFTAVLTACNHA 331
            LFN    KN +  T+++  + Q     EA++LF S +S+ G  PD    +++LT+C   
Sbjct: 306 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS-MSKFGLKPDMYACSSILTSCASL 365

Query: 332 GLLNEAVEYFNKMSCEYRLDPQI--DHYA--CLIDLYARNGNVEKAKQLME-----QMPY 391
             L      F      Y +   +  D Y    LID+YA+   +  A+++ +      +  
Sbjct: 366 HALG-----FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 425

Query: 392 ESNYVMWCSLLGA-CKVHEEVELGKEVAYRLI 413
            +  +   S LG   ++HE + + +++ +RLI
Sbjct: 426 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450


HSP 4 Score: 150.2 bits (378), Expect = 6.1e-35
Identity = 112/420 (26.67%), Postives = 203/420 (48.33%), Query Frame = 1

Query: 10  KYSLCSALNSCAKT--HNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRV 69
           +Y L S + +C+       ++  Q+ + +VK G + ++++ + L+D Y K   I  A+ V
Sbjct: 146 EYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205

Query: 70  FSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSC---PTL 129
           F  +     V+WT++ISG  + G     + +F  ++   V P+ +  +TV+S+C   P L
Sbjct: 206 FDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL 265

Query: 130 KDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYN 189
           +   QI      HAH+++ G    + +++  ID Y K GR+  A  LF     K+ I + 
Sbjct: 266 EGGKQI------HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWT 325

Query: 190 SMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKM 249
           +++SGY QN   +EA++LF  M    L P  +  +S+L +C  L  L  G Q+H+   K 
Sbjct: 326 TLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA 385

Query: 250 GSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRG---SEAL 309
              ++ +V  SL+DMY+KC  + +A  +F+     + VL  +MI  +++ G      EAL
Sbjct: 386 NLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL 445

Query: 310 KLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLID 369
            +F  +       P  + F ++L A      L  + +    M  +Y L+  I   + LID
Sbjct: 446 NIFRDMRFRL-IRPSLLTFVSLLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALID 505

Query: 370 LYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAP 422
           +Y+    ++ ++ + ++M  + + V+W S+        E E   E     +E+  S   P
Sbjct: 506 VYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQSENE---EALNLFLELQLSRERP 553


HSP 5 Score: 39.3 bits (90), Expect = 1.5e-01
Identity = 24/76 (31.58%), Postives = 36/76 (47.37%), Query Frame = 1

Query: 359 LIDLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSN 418
           LI+LY+R G +  A+++ E+MP E N V W +++ AC  H   E    V          +
Sbjct: 85  LINLYSRAGGMVYARKVFEKMP-ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS 144

Query: 419 AAPYVTLAHIYARTGL 435
              Y+  + I A +GL
Sbjct: 145 PNEYILSSFIQACSGL 159

BLAST of Cla005056 vs. TrEMBL
Match: A5ATH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026465 PE=3 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 2.5e-181
Identity = 313/493 (63.49%), Postives = 389/493 (78.90%), Query Frame = 1

Query: 1    MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
            M + G K TK+ LC+ALNSCAK  N  LG+QIHA+I++ G E+NLFLNS+LVDLY+KC+A
Sbjct: 1307 MNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDA 1366

Query: 61   IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
            IV+AKRVF  M+ HDQVSWTSIISG S+NG G E IL FK ML +Q++PNC TY + IS+
Sbjct: 1367 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISA 1426

Query: 121  CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDN 180
            C  L  E       LLHAHV+KLGF   +FV+S  IDCYSK GRI +A LLF  T  +DN
Sbjct: 1427 CTGL--ETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDN 1486

Query: 181  IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSL 240
            I++NSMISGYSQNL GEEALKLFV+MR + L PTDHTLTS+LNACG LT+L+QGRQ+HSL
Sbjct: 1487 ILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSL 1546

Query: 241  VTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEA 300
            V KMGSESNVFVV +LLDMYSKCGS+DEA  +F Q VEKN+VL TSMI  +AQ GRG E 
Sbjct: 1547 VAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEG 1606

Query: 301  LKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLI 360
            L LFE L+ EEGF PDH+CFTAVLTACNHAG L++ ++YFN+M  +Y L P +D YACL+
Sbjct: 1607 LGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLV 1666

Query: 361  DLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAA 420
            DLY RNG++ KAK+LME  P E N VMW S L +CK++ E ELG+E A +L +M+P + A
Sbjct: 1667 DLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTA 1726

Query: 421  PYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCE 480
            PYV +A IYA+ GLW+++ EIR+ M+QK +RKSAGWSW+E+DK+ HVF VADA+HP+S +
Sbjct: 1727 PYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFXVADASHPRSRD 1786

Query: 481  IYSKLDQLNLDMK 494
            I  +L++LNL+MK
Sbjct: 1787 ICVELERLNLEMK 1797

BLAST of Cla005056 vs. TrEMBL
Match: I1KI78_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2)

HSP 1 Score: 625.9 bits (1613), Expect = 4.2e-176
Identity = 298/482 (61.83%), Postives = 383/482 (79.46%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKR 66
           K  KY LC+ L+SCAKT N  LG+QIHA +++ G E+NLFL+S+LVD Y+KC AI++A++
Sbjct: 51  KPIKYVLCTVLSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLSSALVDFYAKCFAILDARK 110

Query: 67  VFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKD 126
           VFS MK HDQVSWTS+I+G S N  G +  L+FK ML TQV PNCFT+A+VIS+C     
Sbjct: 111 VFSGMKIHDQVSWTSLITGFSINRQGRDAFLLFKEMLGTQVTPNCFTFASVISACVGQNG 170

Query: 127 ELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSM 186
            L+    + LHAHVIK G+  ++FV+SS IDCY+  G+I +A LLFYETS KD ++YNSM
Sbjct: 171 ALEH--CSTLHAHVIKRGYDTNNFVVSSLIDCYANWGQIDDAVLLFYETSEKDTVVYNSM 230

Query: 187 ISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGS 246
           ISGYSQNLY E+ALKLFVEMR  NLSPTDHTL ++LNAC  L VL QGRQ+HSLV KMGS
Sbjct: 231 ISGYSQNLYSEDALKLFVEMRKKNLSPTDHTLCTILNACSSLAVLLQGRQMHSLVIKMGS 290

Query: 247 ESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFES 306
           E NVFV  +L+DMYSK G++DEA  + +QT +KN+VL TSMIM +A CGRGSEAL+LF+ 
Sbjct: 291 ERNVFVASALIDMYSKGGNIDEAQCVLDQTSKKNNVLWTSMIMGYAHCGRGSEALELFDC 350

Query: 307 LLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARN 366
           LL+++  +PDH+CFTAVLTACNHAG L++ VEYFNKM+  Y L P ID YACLIDLYARN
Sbjct: 351 LLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMTTYYGLSPDIDQYACLIDLYARN 410

Query: 367 GNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYVTLA 426
           GN+ KA+ LME+MPY  NYV+W S L +CK++ +V+LG+E A +LI+M+P NAAPY+TLA
Sbjct: 411 GNLSKARNLMEEMPYVPNYVIWSSFLSSCKIYGDVKLGREAADQLIKMEPCNAAPYLTLA 470

Query: 427 HIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCEIYSKLD 486
           HIYA+ GLW ++ E+RR +Q+KR+RK AGWSW+E+DKK H+F+V D  H +S EIY+ L+
Sbjct: 471 HIYAKDGLWNEVAEVRRLIQRKRIRKPAGWSWVEVDKKFHIFAVDDVTHQRSNEIYAGLE 530

Query: 487 QL 489
           ++
Sbjct: 531 KI 530

BLAST of Cla005056 vs. TrEMBL
Match: I1KI78_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08
Identity = 60/239 (25.10%), Postives = 109/239 (45.61%), Query Frame = 1

Query: 184 NSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTK 243
           N     +S++      L+    M  S   P  + L +VL++C        G Q+H+ + +
Sbjct: 23  NYYFRNHSKSASTYRVLESLSGMNGSTEKPIKYVLCTVLSSCAKTLNWHLGIQIHAYMIR 82

Query: 244 MGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKL 303
            G E N+F+  +L+D Y+KC ++ +A  +F+     + V  TS+I  F+   +G +A  L
Sbjct: 83  SGYEDNLFLSSALVDFYAKCFAILDARKVFSGMKIHDQVSWTSLITGFSINRQGRDAFLL 142

Query: 304 FESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLY 363
           F+ +L  +   P+   F +V++AC       E     +    +   D      + LID Y
Sbjct: 143 FKEMLGTQ-VTPNCFTFASVISACVGQNGALEHCSTLHAHVIKRGYDTNNFVVSSLIDCY 202

Query: 364 ARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRL-IEMDPSNAAP 422
           A  G ++ A  L  +   E + V++ S++     +    L  E A +L +EM   N +P
Sbjct: 203 ANWGQIDDAVLLFYETS-EKDTVVYNSMISGYSQN----LYSEDALKLFVEMRKKNLSP 255


HSP 2 Score: 625.9 bits (1613), Expect = 4.2e-176
Identity = 298/482 (61.83%), Postives = 383/482 (79.46%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKR 66
           K  KY LC+ L+SCAKT N  LG+QIHA +++ G E+NLFL+S+LVD Y+KC AI++A++
Sbjct: 7   KPIKYVLCTVLSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLSSALVDFYAKCFAILDARK 66

Query: 67  VFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKD 126
           VFS MK HDQVSWTS+I+G S N  G +  L+FK ML TQV PNCFT+A+VIS+C     
Sbjct: 67  VFSGMKIHDQVSWTSLITGFSINRQGRDAFLLFKEMLGTQVTPNCFTFASVISACVGQNG 126

Query: 127 ELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSM 186
            L+    + LHAHVIK G+  ++FV+SS IDCY+  G+I +A LLFYETS KD ++YNSM
Sbjct: 127 ALEH--CSTLHAHVIKRGYDTNNFVVSSLIDCYANWGQIDDAVLLFYETSEKDTVVYNSM 186

Query: 187 ISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGS 246
           ISGYSQNLY E+ALKLFVEMR  NLSPTDHTL ++LNAC  L VL QGRQ+HSLV KMGS
Sbjct: 187 ISGYSQNLYSEDALKLFVEMRKKNLSPTDHTLCTILNACSSLAVLLQGRQMHSLVIKMGS 246

Query: 247 ESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFES 306
           E NVFV  +L+DMYSK G++DEA  + +QT +KN+VL TSMIM +A CGRGSEAL+LF+ 
Sbjct: 247 ERNVFVASALIDMYSKGGNIDEAQCVLDQTSKKNNVLWTSMIMGYAHCGRGSEALELFDC 306

Query: 307 LLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARN 366
           LL+++  +PDH+CFTAVLTACNHAG L++ VEYFNKM+  Y L P ID YACLIDLYARN
Sbjct: 307 LLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMTTYYGLSPDIDQYACLIDLYARN 366

Query: 367 GNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYVTLA 426
           GN+ KA+ LME+MPY  NYV+W S L +CK++ +V+LG+E A +LI+M+P NAAPY+TLA
Sbjct: 367 GNLSKARNLMEEMPYVPNYVIWSSFLSSCKIYGDVKLGREAADQLIKMEPCNAAPYLTLA 426

Query: 427 HIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCEIYSKLD 486
           HIYA+ GLW ++ E+RR +Q+KR+RK AGWSW+E+DKK H+F+V D  H +S EIY+ L+
Sbjct: 427 HIYAKDGLWNEVAEVRRLIQRKRIRKPAGWSWVEVDKKFHIFAVDDVTHQRSNEIYAGLE 486

Query: 487 QL 489
           ++
Sbjct: 487 KI 486

BLAST of Cla005056 vs. TrEMBL
Match: V7BWT6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G155900g PE=4 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 1.0e-161
Identity = 278/457 (60.83%), Postives = 356/457 (77.90%), Query Frame = 1

Query: 10  KYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKRVFS 69
           KY LCSAL+SCAKT N  LG+QIH+ +++ G E+NLFL+S+LVD Y+KC +I++AK+VFS
Sbjct: 70  KYVLCSALSSCAKTLNWCLGIQIHSFMIRSGYEDNLFLSSALVDFYAKCYSILDAKKVFS 129

Query: 70  HMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKDELQ 129
            +KTHDQVSWTS+I+GLS NG G E   +FK ML TQ++PNC T+A+VIS+C        
Sbjct: 130 DIKTHDQVSWTSLITGLSINGQGLEAFSLFKEMLCTQIKPNCLTFASVISACVGQNGSQH 189

Query: 130 IRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSMISG 189
               + LH H IK G   ++FV+SS IDCY+  G+I +A  LF ETS KD ++YNSMISG
Sbjct: 190 ---CSTLHTHTIKQGCDTNNFVVSSLIDCYANQGQIDDAVHLFVETSEKDIVVYNSMISG 249

Query: 190 YSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSESN 249
           YS+N+Y E+ALKLFVEMR  NL  T+HTL +VLNAC  L +L QGRQ+HSLV KMGSE N
Sbjct: 250 YSKNMYSEDALKLFVEMRGRNLGLTNHTLCTVLNACSSLALLLQGRQVHSLVIKMGSERN 309

Query: 250 VFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLS 309
           VFV  +L+DMYSK G +DEA  + +QT EKN+VL TSMIM +AQCGRGSEAL+LF+ LL+
Sbjct: 310 VFVGSALIDMYSKGGDIDEAQLVLDQTSEKNNVLWTSMIMGYAQCGRGSEALELFDCLLT 369

Query: 310 EEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARNGNV 369
           ++  +PDH+C TAVLTACNHAGLL++ VEYFNKM+  Y L P ID YACLIDLYARNGN+
Sbjct: 370 KQELIPDHICLTAVLTACNHAGLLDKGVEYFNKMTSNYGLSPDIDQYACLIDLYARNGNL 429

Query: 370 EKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYVTLAHIY 429
            KA+ L+++MPY+ NYV+W S L +CK++  VELG+E A  L++M+P NAAPY+TLAH+Y
Sbjct: 430 SKARDLIQEMPYDPNYVIWSSFLSSCKIYGNVELGREAADELVKMEPCNAAPYLTLAHVY 489

Query: 430 ARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTH 467
           AR GLW ++ E+RR MQQ+R+RK AGWSW  +D  TH
Sbjct: 490 ARKGLWNEVAEVRRLMQQRRIRKPAGWSW--VDDVTH 521

BLAST of Cla005056 vs. TrEMBL
Match: V7BWT6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G155900g PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-09
Identity = 57/203 (28.08%), Postives = 100/203 (49.26%), Query Frame = 1

Query: 193 NLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGSESNVFV 252
           ++YG  AL+    +  S   P  + L S L++C        G Q+HS + + G E N+F+
Sbjct: 50  SIYG--ALESVSTVSGSMRRPIKYVLCSALSSCAKTLNWCLGIQIHSFMIRSGYEDNLFL 109

Query: 253 VCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFESLLSEEG 312
             +L+D Y+KC S+ +A  +F+     + V  TS+I   +  G+G EA  LF+ +L  + 
Sbjct: 110 SSALVDFYAKCYSILDAKKVFSDIKTHDQVSWTSLITGLSINGQGLEAFSLFKEMLCTQ- 169

Query: 313 FLPDHVCFTAVLTAC---NHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARNGNV 372
             P+ + F +V++AC   N +   +    +  K  C    D      + LID YA  G +
Sbjct: 170 IKPNCLTFASVISACVGQNGSQHCSTLHTHTIKQGC----DTNNFVVSSLIDCYANQGQI 229

Query: 373 EKAKQLMEQMPYESNYVMWCSLL 393
           + A  L  +   E + V++ S++
Sbjct: 230 DDAVHLFVETS-EKDIVVYNSMI 244


HSP 2 Score: 575.1 bits (1481), Expect = 8.5e-161
Identity = 274/457 (59.96%), Postives = 355/457 (77.68%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVNAKR 66
           K  KY LC+AL+SC KT N  LG+QIHA +++ G E+NLFL S+L+D Y+KC AI++AK+
Sbjct: 44  KPIKYVLCTALSSCGKTRNWRLGIQIHAFMIRSGYEDNLFLCSALIDFYAKCFAILDAKK 103

Query: 67  VFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPTLKD 126
           VF  ++THDQVSWTS+I+GLS NG G +  L+FK ML TQ++PNC T+ +VIS+C     
Sbjct: 104 VFCGIRTHDQVSWTSLITGLSINGRGIDAFLLFKEMLYTQIKPNCLTFVSVISACVGQSG 163

Query: 127 ELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIYNSM 186
            LQ    + LH H+IK G   ++FV+ S IDCY+  G+I +A LLF ETS KD ++YNSM
Sbjct: 164 GLQH--CSALHTHIIKQGCDTNNFVVCSLIDCYANQGQIDDAVLLFAETSEKDIVVYNSM 223

Query: 187 ISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTKMGS 246
           ISGYS+N+  E ALKLFVEMR  NL  TDHTL ++LNAC  L +L QGRQ+HSLV KMGS
Sbjct: 224 ISGYSKNMLSENALKLFVEMRGQNLGITDHTLCTILNACSSLALLLQGRQVHSLVIKMGS 283

Query: 247 ESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKLFES 306
           E NVFV  +L+DMYSK G +DEA  + +QT EKN+VL TSMIM +AQCGR SEAL+LF+ 
Sbjct: 284 ERNVFVASALIDMYSKGGDIDEAQRVLDQTSEKNNVLWTSMIMGYAQCGRSSEALELFDC 343

Query: 307 LLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLYARN 366
           LL+++  +PDH+CFTAVLTACNHAGLL++ VEYF KM+  Y L P ID YACLIDLYAR 
Sbjct: 344 LLTKQELVPDHICFTAVLTACNHAGLLDKGVEYFKKMTTNYGLSPDIDQYACLIDLYARK 403

Query: 367 GNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYVTLA 426
           GN+ KA+ +M++MPY+ NYV+W S L +CK++  V+LG+E A +LI+M+PSNAAPY+TLA
Sbjct: 404 GNLSKARDVMQKMPYDPNYVIWSSFLSSCKIYGNVKLGREAADQLIKMEPSNAAPYLTLA 463

Query: 427 HIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDK 464
           H+YAR GLW ++ E+RR MQQ+ +RK AGWSW+E+DK
Sbjct: 464 HVYARKGLWNEVAEVRRLMQQRTMRKPAGWSWVEVDK 498

BLAST of Cla005056 vs. NCBI nr
Match: gi|659072298|ref|XP_008464861.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo])

HSP 1 Score: 939.1 bits (2426), Expect = 3.2e-270
Identity = 462/508 (90.94%), Postives = 486/508 (95.67%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
           MCSLGAKLT YSLCSAL+SCAKTHNLFLGLQIHAQIVKIG EENLFLNSSLVDLYSKCNA
Sbjct: 1   MCSLGAKLTTYSLCSALSSCAKTHNLFLGLQIHAQIVKIGFEENLFLNSSLVDLYSKCNA 60

Query: 61  IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
           IVNAKRVFS MKTHDQVSWTSIISGLSQNG G+E ILMFK MLVTQVRPNCFTYATVISS
Sbjct: 61  IVNAKRVFSRMKTHDQVSWTSIISGLSQNGCGSEAILMFKKMLVTQVRPNCFTYATVISS 120

Query: 121 CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDN 180
           CPTLK+ELQI LATLLHAHVIK GF+FSSFVISSTIDCYSKLGRIQEA+LLF ETSVKDN
Sbjct: 121 CPTLKNELQIHLATLLHAHVIKFGFTFSSFVISSTIDCYSKLGRIQEASLLFSETSVKDN 180

Query: 181 IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSL 240
           II+NSMISGYSQNL GEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQ+HSL
Sbjct: 181 IIFNSMISGYSQNLCGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQVHSL 240

Query: 241 VTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEA 300
           +TKMGSE+NVFVVCSLLDMYSKCGS+DEAF LFNQTV+KNSVLSTSMIMAFAQCGRG EA
Sbjct: 241 LTKMGSENNVFVVCSLLDMYSKCGSIDEAFSLFNQTVQKNSVLSTSMIMAFAQCGRGLEA 300

Query: 301 LKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLI 360
           LKLFE L +E+ F+PDH+CFTAVLTACNHAGLL+EAVEYFNKM CEY+LDPQIDHYACLI
Sbjct: 301 LKLFECLSTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRCEYQLDPQIDHYACLI 360

Query: 361 DLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAA 420
           DLYARNGNVEKAKQ+MEQMPYESNYVMWCSLLGACKVH EVELG+EVAYRLIEMDP NAA
Sbjct: 361 DLYARNGNVEKAKQMMEQMPYESNYVMWCSLLGACKVHAEVELGREVAYRLIEMDPRNAA 420

Query: 421 PYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCE 480
           PY+TLAHIYAR GLWTQ+GEIR++MQQKRVRKSAGWSWIEIDKKTHVFSV DAAHPKSCE
Sbjct: 421 PYLTLAHIYARAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTHVFSVGDAAHPKSCE 480

Query: 481 IYSKLDQLNLDMKAAEHASKALEYDVEC 509
           IYSKLDQLNLDMKAAE + KALEYDVEC
Sbjct: 481 IYSKLDQLNLDMKAAEQSPKALEYDVEC 508

BLAST of Cla005056 vs. NCBI nr
Match: gi|778658982|ref|XP_011653616.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis sativus])

HSP 1 Score: 928.3 bits (2398), Expect = 5.7e-267
Identity = 459/508 (90.35%), Postives = 486/508 (95.67%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
           MCSLGA LTKYSLCSAL+SCAKTHNLFLGLQIHAQIVKIG EENLFLNSSLVDLYSKCNA
Sbjct: 1   MCSLGAILTKYSLCSALSSCAKTHNLFLGLQIHAQIVKIGFEENLFLNSSLVDLYSKCNA 60

Query: 61  IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
           IVNAKRVFS MKTHD VSWTSIISGLSQNG G+E ILMFKNMLVTQVRPNCFTYATVISS
Sbjct: 61  IVNAKRVFSQMKTHDHVSWTSIISGLSQNGCGSEAILMFKNMLVTQVRPNCFTYATVISS 120

Query: 121 CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDN 180
           CPTLK+ELQI LATLLHAHVIK GF+FSSFVISSTIDCYSKLGRI+EAALLF E+SVKDN
Sbjct: 121 CPTLKNELQIHLATLLHAHVIKFGFTFSSFVISSTIDCYSKLGRIREAALLFSESSVKDN 180

Query: 181 IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSL 240
           II+NSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQ+HSL
Sbjct: 181 IIFNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQVHSL 240

Query: 241 VTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEA 300
           VTKMGSE+NVFVVCSLLDMYSKCGS+DEAF +FNQTV+KNSVLSTSMI AFAQCGRG EA
Sbjct: 241 VTKMGSENNVFVVCSLLDMYSKCGSIDEAFSIFNQTVQKNSVLSTSMITAFAQCGRGLEA 300

Query: 301 LKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLI 360
           LKLFESLL+E+ F+PDH+CFTAVLTACNHAGLL+EAVEYFNKM  EY LDPQIDHYACLI
Sbjct: 301 LKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRREYHLDPQIDHYACLI 360

Query: 361 DLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAA 420
           DLYARNGNVEKAKQ+MEQMPYESNYV+ CSLLGACKVH EVELG+EVA+RLIEMDPSNAA
Sbjct: 361 DLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGREVAHRLIEMDPSNAA 420

Query: 421 PYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCE 480
           PY+TLAHI A+ GLWTQ+GEIR++MQQKRVRKSAGWSWIEIDKKTHVFSV DAAHPKSCE
Sbjct: 421 PYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTHVFSVGDAAHPKSCE 480

Query: 481 IYSKLDQLNLDMKAAEHASKALEYDVEC 509
           IYSKLDQLNLDMKAAE +SKALEYDVEC
Sbjct: 481 IYSKLDQLNLDMKAAEQSSKALEYDVEC 508

BLAST of Cla005056 vs. NCBI nr
Match: gi|1009145621|ref|XP_015890433.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujuba])

HSP 1 Score: 685.6 bits (1768), Expect = 6.4e-194
Identity = 328/500 (65.60%), Postives = 411/500 (82.20%), Query Frame = 1

Query: 4   LGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNAIVN 63
           +G KLTKYSLC+ALNSCAKT N  LGLQIHA ++KIG E+NLFLN++LVDLY+KCNA+V+
Sbjct: 4   VGRKLTKYSLCTALNSCAKTLNWRLGLQIHAHVIKIGYEDNLFLNTALVDLYAKCNAVVD 63

Query: 64  AKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISSCPT 123
           ++R+F  MK HDQVSWTSII+G SQNGHG E I MFK ML T+++PN FTY +VIS+C  
Sbjct: 64  SRRIFYCMKRHDQVSWTSIITGFSQNGHGIEAISMFKAMLSTEIKPNSFTYVSVISACTR 123

Query: 124 LKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDNIIY 183
           L   L  +  +LLHAHV++LGF  +SFV+S+ IDCYSK G + +AALLF ET+ +DNI++
Sbjct: 124 LTGAL--KQVSLLHAHVMRLGFDENSFVVSTLIDCYSKWGAMDQAALLFSETADRDNILF 183

Query: 184 NSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSLVTK 243
           NSMISGYSQNLY EEALKLF+EMR  +LSPT HTLTS+LNACG L VL+QG Q+HSLVTK
Sbjct: 184 NSMISGYSQNLYSEEALKLFMEMRNKHLSPTSHTLTSILNACGSLAVLQQGCQIHSLVTK 243

Query: 244 MGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEALKL 303
           MGSESNVFVV +L+DMYSKCGS+D A Y+F++TVEKNSVL TSMIM +AQ GRG +AL+L
Sbjct: 244 MGSESNVFVVSALIDMYSKCGSIDWARYVFDRTVEKNSVLWTSMIMGYAQSGRGLDALEL 303

Query: 304 FESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLIDLY 363
           FE   +EE F PDH+CFTAVLTACNHAGLL   V+YFN+M  +Y L P++D YACL+DLY
Sbjct: 304 FEHAKAEERFTPDHICFTAVLTACNHAGLLERGVDYFNQMRQDYGLVPELDQYACLVDLY 363

Query: 364 ARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAAPYV 423
           ARNG + KAK+L+++MPY+ NYVMW S L +CK+  EV+L +E A +LIEMDPSNAAPYV
Sbjct: 364 ARNGRLRKAKELIKEMPYKPNYVMWTSFLSSCKIDGEVDLAREAAQKLIEMDPSNAAPYV 423

Query: 424 TLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCEIYS 483
           TL+HIYAR GLW ++ E+R+ MQQK +RKSAGWSW+E+DK  HVFSV+D AHP + +IY 
Sbjct: 424 TLSHIYARAGLWDEVAEVRKSMQQKAIRKSAGWSWVEVDKVVHVFSVSDIAHPCTGDIYV 483

Query: 484 KLDQLNLDMKAAEHASKALE 504
           +L++LN++MK   +  K +E
Sbjct: 484 ELEKLNMEMKETSYMLKQIE 501

BLAST of Cla005056 vs. NCBI nr
Match: gi|225468012|ref|XP_002270478.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Vitis vinifera])

HSP 1 Score: 649.4 bits (1674), Expect = 5.1e-183
Identity = 315/493 (63.89%), Postives = 395/493 (80.12%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
           M + G K TK+ LC+ALNSCAK  N  LG+QIHA+I++ G E+NLFLNS+LVDLY+KC+A
Sbjct: 92  MNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDA 151

Query: 61  IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
           IV+AKRVF  M+ HDQVSWTSIISG S+NG G E IL FK ML +Q++PNC TY +VIS+
Sbjct: 152 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISA 211

Query: 121 CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDN 180
           C  L  E       LLHAHV+KLGF   +FV+S  IDCYSK GRI +A LLF  T  +DN
Sbjct: 212 CTGL--ETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDN 271

Query: 181 IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSL 240
           I++NSMISGYSQNL+GEEALKLFVEMR + L+PTDHTLTS+LNACG LT+L+QGRQ+HSL
Sbjct: 272 ILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSL 331

Query: 241 VTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEA 300
           V KMGSESNVFVV +LLDMYSKCGS+DEA  +F+Q VEKN+VL TSMI  +AQ GRG E 
Sbjct: 332 VAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEG 391

Query: 301 LKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLI 360
           L LFE L++EEGF PDH+CFTAVLTACNHAG L++ ++YFN+M  +Y L P +D YACL+
Sbjct: 392 LGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLV 451

Query: 361 DLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAA 420
           DLY RNG++ KAK+LME +P E N VMW S L +CK++ E ELG+E A +L +M+P + A
Sbjct: 452 DLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTA 511

Query: 421 PYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCE 480
           PYV +A IYA+ GLW+++ EIR+ M+QK +RKSAGWSW+E+DK+ HVF VADA+HP+S +
Sbjct: 512 PYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFLVADASHPRSRD 571

Query: 481 IYSKLDQLNLDMK 494
           I  +L++LNL+MK
Sbjct: 572 ICVELERLNLEMK 582

BLAST of Cla005056 vs. NCBI nr
Match: gi|147818972|emb|CAN67116.1| (hypothetical protein VITISV_026465 [Vitis vinifera])

HSP 1 Score: 643.3 bits (1658), Expect = 3.6e-181
Identity = 313/493 (63.49%), Postives = 389/493 (78.90%), Query Frame = 1

Query: 1    MCSLGAKLTKYSLCSALNSCAKTHNLFLGLQIHAQIVKIGLEENLFLNSSLVDLYSKCNA 60
            M + G K TK+ LC+ALNSCAK  N  LG+QIHA+I++ G E+NLFLNS+LVDLY+KC+A
Sbjct: 1307 MNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDA 1366

Query: 61   IVNAKRVFSHMKTHDQVSWTSIISGLSQNGHGNEGILMFKNMLVTQVRPNCFTYATVISS 120
            IV+AKRVF  M+ HDQVSWTSIISG S+NG G E IL FK ML +Q++PNC TY + IS+
Sbjct: 1367 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISA 1426

Query: 121  CPTLKDELQIRLATLLHAHVIKLGFSFSSFVISSTIDCYSKLGRIQEAALLFYETSVKDN 180
            C  L  E       LLHAHV+KLGF   +FV+S  IDCYSK GRI +A LLF  T  +DN
Sbjct: 1427 CTGL--ETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDN 1486

Query: 181  IIYNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQLHSL 240
            I++NSMISGYSQNL GEEALKLFV+MR + L PTDHTLTS+LNACG LT+L+QGRQ+HSL
Sbjct: 1487 ILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSL 1546

Query: 241  VTKMGSESNVFVVCSLLDMYSKCGSVDEAFYLFNQTVEKNSVLSTSMIMAFAQCGRGSEA 300
            V KMGSESNVFVV +LLDMYSKCGS+DEA  +F Q VEKN+VL TSMI  +AQ GRG E 
Sbjct: 1547 VAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEG 1606

Query: 301  LKLFESLLSEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMSCEYRLDPQIDHYACLI 360
            L LFE L+ EEGF PDH+CFTAVLTACNHAG L++ ++YFN+M  +Y L P +D YACL+
Sbjct: 1607 LGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLV 1666

Query: 361  DLYARNGNVEKAKQLMEQMPYESNYVMWCSLLGACKVHEEVELGKEVAYRLIEMDPSNAA 420
            DLY RNG++ KAK+LME  P E N VMW S L +CK++ E ELG+E A +L +M+P + A
Sbjct: 1667 DLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTA 1726

Query: 421  PYVTLAHIYARTGLWTQLGEIRRQMQQKRVRKSAGWSWIEIDKKTHVFSVADAAHPKSCE 480
            PYV +A IYA+ GLW+++ EIR+ M+QK +RKSAGWSW+E+DK+ HVF VADA+HP+S +
Sbjct: 1727 PYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFXVADASHPRSRD 1786

Query: 481  IYSKLDQLNLDMK 494
            I  +L++LNL+MK
Sbjct: 1787 ICVELERLNLEMK 1797

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP207_ARATH1.6e-9133.33Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN... [more]
PP272_ARATH2.7e-9135.83Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
PP151_ARATH6.2e-8834.92Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP172_ARATH1.4e-8734.76Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... [more]
PP357_ARATH2.3e-8733.87Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A5ATH6_VITVI2.5e-18163.49Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026465 PE=3 SV=1[more]
I1KI78_SOYBN4.2e-17661.83Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2[more]
I1KI78_SOYBN2.6e-0825.10Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2[more]
V7BWT6_PHAVU1.0e-16160.83Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G155900g PE=4 SV=1[more]
V7BWT6_PHAVU1.4e-0928.08Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G155900g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659072298|ref|XP_008464861.1|3.2e-27090.94PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m... [more]
gi|778658982|ref|XP_011653616.1|5.7e-26790.35PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis s... [more]
gi|1009145621|ref|XP_015890433.1|6.4e-19465.60PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujub... [more]
gi|225468012|ref|XP_002270478.1|5.1e-18363.89PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Vitis vin... [more]
gi|147818972|emb|CAN67116.1|3.6e-18163.49hypothetical protein VITISV_026465 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
biological_process GO:0080156 mitochondrial mRNA modification
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0017111 nucleoside-triphosphatase activity
molecular_function GO:0043167 ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003774 motor activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU14687watermelon EST collection version 2.0transcribed_cluster
WMU29132watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU41590watermelon EST collection version 2.0transcribed_cluster
WMU43608watermelon EST collection version 2.0transcribed_cluster
WMU73862watermelon EST collection version 2.0transcribed_cluster
WMU73992watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005056Cla005056.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU14687WMU14687transcribed_cluster
WMU29132WMU29132transcribed_cluster
WMU73992WMU73992transcribed_cluster
WMU73862WMU73862transcribed_cluster
WMU43608WMU43608transcribed_cluster
WMU41590WMU41590transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 318..344
score: 0.0025coord: 156..174
score: 0.55coord: 254..279
score: 0.0087coord: 285..309
score: 3.6E-4coord: 356..380
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 75..121
score: 4.6E-8coord: 178..225
score: 2.6
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 254..282
score: 0.0014coord: 182..214
score: 6.1E-7coord: 356..384
score: 2.0E-5coord: 77..111
score: 2.0E-4coord: 318..344
score: 0.0023coord: 285..316
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 179..213
score: 11.509coord: 214..248
score: 5.261coord: 9..43
score: 5.47coord: 148..178
score: 6.149coord: 352..382
score: 8.243coord: 280..315
score: 9.284coord: 75..109
score: 9.81coord: 44..74
score: 6.347coord: 418..452
score: 7.289coord: 316..346
score: 7.563coord: 249..279
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 247..379
score: 2.3E-12coord: 412..503
score: 2.3E-12coord: 157..179
score: 2.3
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 249..435
score: 6.8
NoneNo IPR availableunknownCoilCoilcoord: 485..505
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..459
score: 1.7E
NoneNo IPR availablePANTHERPTHR24015:SF447SUBFAMILY NOT NAMEDcoord: 1..459
score: 1.7E

The following gene(s) are paralogous to this gene:

None