CmoCh01G005610 (gene) Cucurbita moschata (Rifu)

NameCmoCh01G005610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Pentatricopeptide repeat-containing protein) (3.4.24.-) (3.6.4.3)
LocationCmo_Chr01 : 2805986 .. 2807512 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCAGCTTGGGAGCGAAATTGACCAAGTATTCTCTCTGCTCTGCTCTTAATTCTTGTGCTAAAACAATTAATTTGTTTTTGGGTCTGCAAATTCATGCGCAGATTGTCAAAATAGGATTTGAAGATAACTTATATTTGAACAGTGGACTGGTTAATTTATACTCCAAGTGTAATGCCATTGTGGATGCAAAAAGGATCTTCGTTCATATGAAGACTCATGACCAAGTTTCTTGGACCTCTATAATATCTGGGCTATCCCAAAATGGGGCTGGGAGGGAAGCCATCTTGATGTTTAAGAATATGTTGGTAACTCAGGATAGACCCAACTGTTTTACTTATGCCACTGTTATTAGTTCATGCCCAAGTCTGAAGGATGAACTTCCGATTCATCTTACAACTTTGTTTCATGCTCATGTTATCAAACTTGGTTTTCTTTTTTTTAGCAGTTTTGTAATTAGCTCCGCTATTGATTGTTACTCAAAACTAGGAAGAATAGAAGAAGCTGCCCTGCTCTTTTATGAGGCAAATGTGAAGGACAATGTCATATTTAATTCTATGATATCAGGGTTTTCTCAAAACTTGTATGGGGAAGAGGCATTAAAACTGTTTGTAGAGATGAGAGCTAGTAATTTGAGCCCAACTGATCATACATTAACTAGTGTTTTAAATGCTTGTGGGAGTCTAACAGTACTTGAACAAGGAAGGCAAGTGCATTCTCTAGTTACAAAAATGGGATCAGAGAATAATGTGTTTGTGGTCTGTTCTTTGTTGGATATGTACTCGAAATGTGGCAGTGTTGATGATGCATTTATCATATTCAATCAGACGGTTGAGAAGAACAGTGTGCTTTCGACTTCGATGATAATGGCTTTTGCTCAATGTGGTAGAGGCTCAGATGCCTTAAAGCTCTTTGAGAGTTTGTTGACTGAAGAAGGTTTCTTGCCTGATCATGTCTGTTTTACTGCAGTTTTAACTGCCTGCAACCATGCAGGATTACTAAATGAGGCAGTTGAATACTTCAATAAAATGGGCAGTGAATACAGATTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGGCATGTAGAAAAAGCTAAGGAATTGATGGAGAAAATGCCATATGAGTCTAATTACGTAATGTGGTGTTCCCTTTTAGGTGCTTGCAAAGTTCATGTAGAGGTCGAGCTTGGGAGGGAGGTAGCATATCGACTCATCGAGATGGATCCAGGTAATGCTGCACCCTATGTAACTCTTGCTCATATCTATGCTAGAGCTGGTTTATGGACACAGTTGGCTGATATTAGAAATCAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGCTGGATTGAGATAGATAAGAAAGCGCATGTCTTCTCAGTTGGTGATGCTACTCATCCTAAATCCTGTGAGATTTATTCAAAACTTAACCAACTGGACTTGGATATGAGAGGAGCTGAACATGCATCAAAAGCACTTGAATTTGTTGAGTTTTAA

mRNA sequence

ATGTGCAGCTTGGGAGCGAAATTGACCAAGTATTCTCTCTGCTCTGCTCTTAATTCTTGTGCTAAAACAATTAATTTGTTTTTGGGTCTGCAAATTCATGCGCAGATTGTCAAAATAGGATTTGAAGATAACTTATATTTGAACAGTGGACTGGTTAATTTATACTCCAAGTGTAATGCCATTGTGGATGCAAAAAGGATCTTCGTTCATATGAAGACTCATGACCAAGTTTCTTGGACCTCTATAATATCTGGGCTATCCCAAAATGGGGCTGGGAGGGAAGCCATCTTGATGTTTAAGAATATGTTGGTAACTCAGGATAGACCCAACTGTTTTACTTATGCCACTGTTATTAGTTCATGCCCAAGTCTGAAGGATGAACTTCCGATTCATCTTACAACTTTGTTTCATGCTCATGTTATCAAACTTGGTTTTCTTTTTTTTAGCAGTTTTGTAATTAGCTCCGCTATTGATTGTTACTCAAAACTAGGAAGAATAGAAGAAGCTGCCCTGCTCTTTTATGAGGCAAATGTGAAGGACAATGTCATATTTAATTCTATGATATCAGGGTTTTCTCAAAACTTGTATGGGGAAGAGGCATTAAAACTGTTTGTAGAGATGAGAGCTAGTAATTTGAGCCCAACTGATCATACATTAACTAGTGTTTTAAATGCTTGTGGGAGTCTAACAGTACTTGAACAAGGAAGGCAAGTGCATTCTCTAGTTACAAAAATGGGATCAGAGAATAATGTGTTTGTGGTCTGTTCTTTGTTGGATATGTACTCGAAATGTGGCAGTGTTGATGATGCATTTATCATATTCAATCAGACGGTTGAGAAGAACAGTGTGCTTTCGACTTCGATGATAATGGCTTTTGCTCAATGTGGTAGAGGCTCAGATGCCTTAAAGCTCTTTGAGAGTTTGTTGACTGAAGAAGGTTTCTTGCCTGATCATGTCTGTTTTACTGCAGTTTTAACTGCCTGCAACCATGCAGGATTACTAAATGAGGCAGTTGAATACTTCAATAAAATGGGCAGTGAATACAGATTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGGCATGTAGAAAAAGCTAAGGAATTGATGGAGAAAATGCCATATGAGTCTAATTACGTAATGTGGTGTTCCCTTTTAGGTGCTTGCAAAGTTCATGTAGAGGTCGAGCTTGGGAGGGAGGTAGCATATCGACTCATCGAGATGGATCCAGGTAATGCTGCACCCTATGTAACTCTTGCTCATATCTATGCTAGAGCTGGTTTATGGACACAGTTGGCTGATATTAGAAATCAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGCTGGATTGAGATAGATAAGAAAGCGCATGTCTTCTCAGTTGGTGATGCTACTCATCCTAAATCCTGTGAGATTTATTCAAAACTTAACCAACTGGACTTGGATATGAGAGGAGCTGAACATGCATCAAAAGCACTTGAATTTGTTGAGTTTTAA

Coding sequence (CDS)

ATGTGCAGCTTGGGAGCGAAATTGACCAAGTATTCTCTCTGCTCTGCTCTTAATTCTTGTGCTAAAACAATTAATTTGTTTTTGGGTCTGCAAATTCATGCGCAGATTGTCAAAATAGGATTTGAAGATAACTTATATTTGAACAGTGGACTGGTTAATTTATACTCCAAGTGTAATGCCATTGTGGATGCAAAAAGGATCTTCGTTCATATGAAGACTCATGACCAAGTTTCTTGGACCTCTATAATATCTGGGCTATCCCAAAATGGGGCTGGGAGGGAAGCCATCTTGATGTTTAAGAATATGTTGGTAACTCAGGATAGACCCAACTGTTTTACTTATGCCACTGTTATTAGTTCATGCCCAAGTCTGAAGGATGAACTTCCGATTCATCTTACAACTTTGTTTCATGCTCATGTTATCAAACTTGGTTTTCTTTTTTTTAGCAGTTTTGTAATTAGCTCCGCTATTGATTGTTACTCAAAACTAGGAAGAATAGAAGAAGCTGCCCTGCTCTTTTATGAGGCAAATGTGAAGGACAATGTCATATTTAATTCTATGATATCAGGGTTTTCTCAAAACTTGTATGGGGAAGAGGCATTAAAACTGTTTGTAGAGATGAGAGCTAGTAATTTGAGCCCAACTGATCATACATTAACTAGTGTTTTAAATGCTTGTGGGAGTCTAACAGTACTTGAACAAGGAAGGCAAGTGCATTCTCTAGTTACAAAAATGGGATCAGAGAATAATGTGTTTGTGGTCTGTTCTTTGTTGGATATGTACTCGAAATGTGGCAGTGTTGATGATGCATTTATCATATTCAATCAGACGGTTGAGAAGAACAGTGTGCTTTCGACTTCGATGATAATGGCTTTTGCTCAATGTGGTAGAGGCTCAGATGCCTTAAAGCTCTTTGAGAGTTTGTTGACTGAAGAAGGTTTCTTGCCTGATCATGTCTGTTTTACTGCAGTTTTAACTGCCTGCAACCATGCAGGATTACTAAATGAGGCAGTTGAATACTTCAATAAAATGGGCAGTGAATACAGATTAGATCCTCAAATTGATCATTATGCTTGTTTGATTGATCTCTATGCCAGAAATGGGCATGTAGAAAAAGCTAAGGAATTGATGGAGAAAATGCCATATGAGTCTAATTACGTAATGTGGTGTTCCCTTTTAGGTGCTTGCAAAGTTCATGTAGAGGTCGAGCTTGGGAGGGAGGTAGCATATCGACTCATCGAGATGGATCCAGGTAATGCTGCACCCTATGTAACTCTTGCTCATATCTATGCTAGAGCTGGTTTATGGACACAGTTGGCTGATATTAGAAATCAGATGCAACAAAAAAGGGTAAGGAAAAGTGCAGGGTGGAGCTGGATTGAGATAGATAAGAAAGCGCATGTCTTCTCAGTTGGTGATGCTACTCATCCTAAATCCTGTGAGATTTATTCAAAACTTAACCAACTGGACTTGGATATGAGAGGAGCTGAACATGCATCAAAAGCACTTGAATTTGTTGAGTTTTAA
BLAST of CmoCh01G005610 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 3.3e-97
Identity = 193/527 (36.62%), Postives = 307/527 (58.25%), Query Frame = 1

Query: 5   GAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDA 64
           G  L +YS  S L++C+   ++  G+Q+H+ I K  F  ++Y+ S LV++YSKC  + DA
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206

Query: 65  KRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSL 124
           +R+F  M   + VSW S+I+   QNG   EA+ +F+ ML ++  P+  T A+VIS+C SL
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266

Query: 125 KDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKD---- 184
                I +    H  V+K   L     + ++ +D Y+K  RI+EA  +F    +++    
Sbjct: 267 S---AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 326

Query: 185 --------------------------NVI-FNSMISGFSQNLYGEEALKLFVEMRASNLS 244
                                     NV+ +N++I+G++QN   EEAL LF  ++  ++ 
Sbjct: 327 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 386

Query: 245 PTDHTLTSVLNACGSLTVLEQGRQVHSLVTK------MGSENNVFVVCSLLDMYSKCGSV 304
           PT ++  ++L AC  L  L  G Q H  V K       G E+++FV  SL+DMY KCG V
Sbjct: 387 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 446

Query: 305 DDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTA 364
           ++ +++F + +E++ V   +MI+ FAQ G G++AL+LF  +L E G  PDH+    VL+A
Sbjct: 447 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSA 506

Query: 365 CNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKMPYESNYV 424
           C HAG + E   YF+ M  ++ + P  DHY C++DL  R G +E+AK ++E+MP + + V
Sbjct: 507 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 566

Query: 425 MWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYVTLAHIYARAGLWTQLADIRNQMQ 484
           +W SLL ACKVH  + LG+ VA +L+E++P N+ PYV L+++YA  G W  + ++R  M+
Sbjct: 567 IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMR 626

Query: 485 QKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYSKLNQLDLDMR 495
           ++ V K  G SWI+I    HVF V D +HP+  +I+S L+ L  +MR
Sbjct: 627 KEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669

BLAST of CmoCh01G005610 vs. Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 333.6 bits (854), Expect = 3.9e-90
Identity = 178/523 (34.03%), Postives = 301/523 (57.55%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA 60
           + S G    + SL     +CA    L  GLQI+   +K     ++ + +  +++Y KC A
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432

Query: 61  IVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISS 120
           + +A R+F  M+  D VSW +II+   QNG G E + +F +ML ++  P+ FT+ +++ +
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492

Query: 121 CP--SLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALL----FY 180
           C   SL   + IH      + ++K G    SS V  S ID YSK G IEEA  +    F 
Sbjct: 493 CTGGSLGYGMEIH------SSIVKSGMASNSS-VGCSLIDMYSKCGMIEEAEKIHSRFFQ 552

Query: 181 EANVKDN----------------VIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHT 240
            ANV                   V +NS+ISG+      E+A  LF  M    ++P   T
Sbjct: 553 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 612

Query: 241 LTSVLNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTV 300
             +VL+ C +L     G+Q+H+ V K   +++V++  +L+DMYSKCG + D+ ++F +++
Sbjct: 613 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 672

Query: 301 EKNSVLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAV 360
            ++ V   +MI  +A  G+G +A++LFE ++  E   P+HV F ++L AC H GL+++ +
Sbjct: 673 RRDFVTWNAMICGYAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACAHMGLIDKGL 732

Query: 361 EYFNKMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKV 420
           EYF  M  +Y LDPQ+ HY+ ++D+  ++G V++A EL+ +MP+E++ V+W +LLG C +
Sbjct: 733 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTI 792

Query: 421 H-VEVELGREVAYRLIEMDPGNAAPYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGW 480
           H   VE+  E    L+ +DP +++ Y  L+++YA AG+W +++D+R  M+  +++K  G 
Sbjct: 793 HRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGC 852

Query: 481 SWIEIDKKAHVFSVGDATHPKSCEIYSKLNQLDLDMRGAEHAS 501
           SW+E+  + HVF VGD  HP+  EIY +L  +  +M+  + +S
Sbjct: 853 SWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSS 887

BLAST of CmoCh01G005610 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 6.2e-88
Identity = 174/496 (35.08%), Postives = 292/496 (58.87%), Query Frame = 1

Query: 5   GAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA---I 64
           G +  K++L S  ++CA+  NL LG Q+H+  ++ G  D++     LV++Y+KC+A   +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSV 323

Query: 65  VDAKRIFVHMKTHDQVSWTSIISGLSQN-GAGREAILMFKNMLVTQDR--PNCFTYATVI 124
            D +++F  M+ H  +SWT++I+G  +N     EAI +F  M +TQ    PN FT+++  
Sbjct: 324 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM-ITQGHVEPNHFTFSSAF 383

Query: 125 SSCPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANV 184
            +C +L D     +         K G L  +S V +S I  + K  R+E+A   F   + 
Sbjct: 384 KACGNLSDP---RVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDAQRAFESLSE 443

Query: 185 KDNVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQV 244
           K+ V +N+ + G  +NL  E+A KL  E+    L  +  T  S+L+   ++  + +G Q+
Sbjct: 444 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 503

Query: 245 HSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRG 304
           HS V K+G   N  V  +L+ MYSKCGS+D A  +FN    +N +  TSMI  FA+ G  
Sbjct: 504 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFA 563

Query: 305 SDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYA 364
              L+ F  ++ EEG  P+ V + A+L+AC+H GL++E   +FN M  ++++ P+++HYA
Sbjct: 564 IRVLETFNQMI-EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 623

Query: 365 CLIDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPG 424
           C++DL  R G +  A E +  MP++++ ++W + LGAC+VH   ELG+  A +++E+DP 
Sbjct: 624 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 683

Query: 425 NAAPYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPK 484
             A Y+ L++IYA AG W +  ++R +M+++ + K  G SWIE+  K H F VGD  HP 
Sbjct: 684 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 743

Query: 485 SCEIYSKLNQLDLDMR 495
           + +IY +L++L  +++
Sbjct: 744 AHQIYDELDRLITEIK 751

BLAST of CmoCh01G005610 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 5.2e-87
Identity = 160/476 (33.61%), Postives = 294/476 (61.76%), Query Frame = 1

Query: 17  LNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDAKRIFVHMKTHDQ 76
           L +C+   +L +G  +HAQ+ ++GF+ ++++ +GL+ LY+KC  +  A+ +F  +   ++
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185

Query: 77  --VSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSLKDELPIHLTT 136
             VSWT+I+S  +QNG   EA+ +F  M     +P+     +V+++   L+D   +    
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD---LKQGR 245

Query: 137 LFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVIFNSMISGFSQN 196
             HA V+K+G       +IS     Y+K G++  A +LF +    + +++N+MISG+++N
Sbjct: 246 SIHASVVKMGLEIEPDLLISLNT-MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 305

Query: 197 LYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMGSENNVFVV 256
            Y  EA+ +F EM   ++ P   ++TS ++AC  +  LEQ R ++  V +    ++VF+ 
Sbjct: 306 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 365

Query: 257 CSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFESLLTEEGF 316
            +L+DM++KCGSV+ A ++F++T++++ V+ ++MI+ +   GR  +A+ L+ ++    G 
Sbjct: 366 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGV 425

Query: 317 LPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLYARNGHVEKAK 376
            P+ V F  +L ACNH+G++ E   +FN+M ++++++PQ  HYAC+IDL  R GH+++A 
Sbjct: 426 HPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAY 485

Query: 377 ELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYVTLAHIYARAG 436
           E+++ MP +    +W +LL ACK H  VELG   A +L  +DP N   YV L+++YA A 
Sbjct: 486 EVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR 545

Query: 437 LWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYSKLNQLD 491
           LW ++A++R +M++K + K  G SW+E+  +   F VGD +HP+  EI  ++  ++
Sbjct: 546 LWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 595

BLAST of CmoCh01G005610 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 2.6e-86
Identity = 174/490 (35.51%), Postives = 286/490 (58.37%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDAKR 66
           +L++ S  S +  CA    L    Q+H  +VK GF  +  + + L+  YSKC A++DA R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351

Query: 67  IFVHMK-THDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSLK 126
           +F  +    + VSWT++ISG  QN    EA+ +F  M     RPN FTY+ ++++     
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----- 411

Query: 127 DELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVIFN 186
             LP+   +  HA V+K  +   SS V ++ +D Y KLG++EEAA +F   + KD V ++
Sbjct: 412 --LPVISPSEVHAQVVKTNYER-SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 471

Query: 187 SMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTV-LEQGRQVHSLVTK 246
           +M++G++Q    E A+K+F E+    + P + T +S+LN C +    + QG+Q H    K
Sbjct: 472 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 531

Query: 247 MGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKL 306
              ++++ V  +LL MY+K G+++ A  +F +  EK+ V   SMI  +AQ G+   AL +
Sbjct: 532 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 591

Query: 307 FESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLY 366
           F+ +   +  + D V F  V  AC HAGL+ E  +YF+ M  + ++ P  +H +C++DLY
Sbjct: 592 FKEMKKRKVKM-DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 651

Query: 367 ARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYV 426
           +R G +EKA +++E MP  +   +W ++L AC+VH + ELGR  A ++I M P ++A YV
Sbjct: 652 SRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYV 711

Query: 427 TLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYS 486
            L+++YA +G W + A +R  M ++ V+K  G+SWIE+  K + F  GD +HP   +IY 
Sbjct: 712 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYM 771

Query: 487 KLNQLDLDMR 495
           KL  L   ++
Sbjct: 772 KLEDLSTRLK 772

BLAST of CmoCh01G005610 vs. TrEMBL
Match: A5ATH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026465 PE=3 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 2.8e-180
Identity = 310/494 (62.75%), Postives = 389/494 (78.74%), Query Frame = 1

Query: 1    MCSLGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA 60
            M + G K TK+ LC+ALNSCAK +N  LG+QIHA+I++ GFEDNL+LNS LV+LY+KC+A
Sbjct: 1307 MNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDA 1366

Query: 61   IVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISS 120
            IVDAKR+F  M+ HDQVSWTSIISG S+NG G+EAIL FK ML +Q +PNC TY + IS+
Sbjct: 1367 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISA 1426

Query: 121  CPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKD 180
            C  L  E       L HAHV+KLGF    +FV+S  IDCYSK GRI++A LLF     +D
Sbjct: 1427 CTGL--ETIFDQCALLHAHVVKLGF-GVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERD 1486

Query: 181  NVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHS 240
            N++FNSMISG+SQNL GEEALKLFV+MR + L PTDHTLTS+LNACGSLT+L+QGRQVHS
Sbjct: 1487 NILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHS 1546

Query: 241  LVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSD 300
            LV KMGSE+NVFVV +LLDMYSKCGS+D+A  +F Q VEKN+VL TSMI  +AQ GRG +
Sbjct: 1547 LVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPE 1606

Query: 301  ALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACL 360
             L LFE L+ EEGF PDH+CFTAVLTACNHAG L++ ++YFN+M  +Y L P +D YACL
Sbjct: 1607 GLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACL 1666

Query: 361  IDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNA 420
            +DLY RNGH+ KAKELME  P E N VMW S L +CK++ E ELGRE A +L +M+P + 
Sbjct: 1667 VDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCST 1726

Query: 421  APYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSC 480
            APYV +A IYA+AGLW+++ +IR  M+QK +RKSAGWSW+E+DK+ HVF V DA+HP+S 
Sbjct: 1727 APYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFXVADASHPRSR 1786

Query: 481  EIYSKLNQLDLDMR 495
            +I  +L +L+L+M+
Sbjct: 1787 DICVELERLNLEMK 1797

BLAST of CmoCh01G005610 vs. TrEMBL
Match: I1KI78_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2)

HSP 1 Score: 621.7 bits (1602), Expect = 7.9e-175
Identity = 296/483 (61.28%), Postives = 386/483 (79.92%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDAKR 66
           K  KY LC+ L+SCAKT+N  LG+QIHA +++ G+EDNL+L+S LV+ Y+KC AI+DA++
Sbjct: 51  KPIKYVLCTVLSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLSSALVDFYAKCFAILDARK 110

Query: 67  IFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSLKD 126
           +F  MK HDQVSWTS+I+G S N  GR+A L+FK ML TQ  PNCFT+A+VIS+C     
Sbjct: 111 VFSGMKIHDQVSWTSLITGFSINRQGRDAFLLFKEMLGTQVTPNCFTFASVISACVGQNG 170

Query: 127 ELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVIFNS 186
            L  H +TL HAHVIK G+   ++FV+SS IDCY+  G+I++A LLFYE + KD V++NS
Sbjct: 171 ALE-HCSTL-HAHVIKRGY-DTNNFVVSSLIDCYANWGQIDDAVLLFYETSEKDTVVYNS 230

Query: 187 MISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMG 246
           MISG+SQNLY E+ALKLFVEMR  NLSPTDHTL ++LNAC SL VL QGRQ+HSLV KMG
Sbjct: 231 MISGYSQNLYSEDALKLFVEMRKKNLSPTDHTLCTILNACSSLAVLLQGRQMHSLVIKMG 290

Query: 247 SENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFE 306
           SE NVFV  +L+DMYSK G++D+A  + +QT +KN+VL TSMIM +A CGRGS+AL+LF+
Sbjct: 291 SERNVFVASALIDMYSKGGNIDEAQCVLDQTSKKNNVLWTSMIMGYAHCGRGSEALELFD 350

Query: 307 SLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLYAR 366
            LLT++  +PDH+CFTAVLTACNHAG L++ VEYFNKM + Y L P ID YACLIDLYAR
Sbjct: 351 CLLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMTTYYGLSPDIDQYACLIDLYAR 410

Query: 367 NGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYVTL 426
           NG++ KA+ LME+MPY  NYV+W S L +CK++ +V+LGRE A +LI+M+P NAAPY+TL
Sbjct: 411 NGNLSKARNLMEEMPYVPNYVIWSSFLSSCKIYGDVKLGREAADQLIKMEPCNAAPYLTL 470

Query: 427 AHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYSKL 486
           AHIYA+ GLW ++A++R  +Q+KR+RK AGWSW+E+DKK H+F+V D TH +S EIY+ L
Sbjct: 471 AHIYAKDGLWNEVAEVRRLIQRKRIRKPAGWSWVEVDKKFHIFAVDDVTHQRSNEIYAGL 530

Query: 487 NQL 490
            ++
Sbjct: 531 EKI 530

BLAST of CmoCh01G005610 vs. TrEMBL
Match: A0A0B2R406_GLYSO (Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_031026 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 7.9e-175
Identity = 296/483 (61.28%), Postives = 386/483 (79.92%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDAKR 66
           K  KY LC+ L+SCAKT+N  LG+QIHA +++ G+EDNL+L+S LV+ Y+KC AI+DA++
Sbjct: 7   KPIKYVLCTVLSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLSSALVDFYAKCFAILDARK 66

Query: 67  IFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSLKD 126
           +F  MK HDQVSWTS+I+G S N  GR+A L+FK ML TQ  PNCFT+A+VIS+C     
Sbjct: 67  VFSGMKIHDQVSWTSLITGFSINRQGRDAFLLFKEMLGTQVTPNCFTFASVISACVGQNG 126

Query: 127 ELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVIFNS 186
            L  H +TL HAHVIK G+   ++FV+SS IDCY+  G+I++A LLFYE + KD V++NS
Sbjct: 127 ALE-HCSTL-HAHVIKRGY-DTNNFVVSSLIDCYANWGQIDDAVLLFYETSEKDTVVYNS 186

Query: 187 MISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMG 246
           MISG+SQNLY E+ALKLFVEMR  NLSPTDHTL ++LNAC SL VL QGRQ+HSLV KMG
Sbjct: 187 MISGYSQNLYSEDALKLFVEMRKKNLSPTDHTLCTILNACSSLAVLLQGRQMHSLVIKMG 246

Query: 247 SENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFE 306
           SE NVFV  +L+DMYSK G++D+A  + +QT +KN+VL TSMIM +A CGRGS+AL+LF+
Sbjct: 247 SERNVFVASALIDMYSKGGNIDEAQCVLDQTSKKNNVLWTSMIMGYAHCGRGSEALELFD 306

Query: 307 SLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLYAR 366
            LLT++  +PDH+CFTAVLTACNHAG L++ VEYFNKM + Y L P ID YACLIDLYAR
Sbjct: 307 CLLTKQEVIPDHICFTAVLTACNHAGFLDKGVEYFNKMTTYYGLSPDIDQYACLIDLYAR 366

Query: 367 NGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYVTL 426
           NG++ KA+ LME+MPY  NYV+W S L +CK++ +V+LGRE A +LI+M+P NAAPY+TL
Sbjct: 367 NGNLSKARNLMEEMPYVPNYVIWSSFLSSCKIYGDVKLGREAADQLIKMEPCNAAPYLTL 426

Query: 427 AHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYSKL 486
           AHIYA+ GLW ++A++R  +Q+KR+RK AGWSW+E+DKK H+F+V D TH +S EIY+ L
Sbjct: 427 AHIYAKDGLWNEVAEVRRLIQRKRIRKPAGWSWVEVDKKFHIFAVDDVTHQRSNEIYAGL 486

Query: 487 NQL 490
            ++
Sbjct: 487 EKI 486

BLAST of CmoCh01G005610 vs. TrEMBL
Match: V7BWT6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G155900g PE=4 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 3.8e-161
Identity = 279/472 (59.11%), Postives = 365/472 (77.33%), Query Frame = 1

Query: 10  KYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDAKRIFV 69
           KY LCSAL+SCAKT+N  LG+QIH+ +++ G+EDNL+L+S LV+ Y+KC +I+DAK++F 
Sbjct: 70  KYVLCSALSSCAKTLNWCLGIQIHSFMIRSGYEDNLFLSSALVDFYAKCYSILDAKKVFS 129

Query: 70  HMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSLKDELP 129
            +KTHDQVSWTS+I+GLS NG G EA  +FK ML TQ +PNC T+A+VIS+C        
Sbjct: 130 DIKTHDQVSWTSLITGLSINGQGLEAFSLFKEMLCTQIKPNCLTFASVISACVGQNGSQ- 189

Query: 130 IHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVIFNSMIS 189
            H +TL H H IK G    ++FV+SS IDCY+  G+I++A  LF E + KD V++NSMIS
Sbjct: 190 -HCSTL-HTHTIKQG-CDTNNFVVSSLIDCYANQGQIDDAVHLFVETSEKDIVVYNSMIS 249

Query: 190 GFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMGSEN 249
           G+S+N+Y E+ALKLFVEMR  NL  T+HTL +VLNAC SL +L QGRQVHSLV KMGSE 
Sbjct: 250 GYSKNMYSEDALKLFVEMRGRNLGLTNHTLCTVLNACSSLALLLQGRQVHSLVIKMGSER 309

Query: 250 NVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFESLL 309
           NVFV  +L+DMYSK G +D+A ++ +QT EKN+VL TSMIM +AQCGRGS+AL+LF+ LL
Sbjct: 310 NVFVGSALIDMYSKGGDIDEAQLVLDQTSEKNNVLWTSMIMGYAQCGRGSEALELFDCLL 369

Query: 310 TEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLYARNGH 369
           T++  +PDH+C TAVLTACNHAGLL++ VEYFNKM S Y L P ID YACLIDLYARNG+
Sbjct: 370 TKQELIPDHICLTAVLTACNHAGLLDKGVEYFNKMTSNYGLSPDIDQYACLIDLYARNGN 429

Query: 370 VEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYVTLAHI 429
           + KA++L+++MPY+ NYV+W S L +CK++  VELGRE A  L++M+P NAAPY+TLAH+
Sbjct: 430 LSKARDLIQEMPYDPNYVIWSSFLSSCKIYGNVELGREAADELVKMEPCNAAPYLTLAHV 489

Query: 430 YARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCE 482
           YAR GLW ++A++R  MQQ+R+RK AGWSW++           D TH +S E
Sbjct: 490 YARKGLWNEVAEVRRLMQQRRIRKPAGWSWVD-----------DVTHQQSNE 526

BLAST of CmoCh01G005610 vs. TrEMBL
Match: W9SEZ6_9ROSA (Pentatricopeptide repeat-containing protein OS=Morus notabilis GN=L484_016093 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 4.7e-159
Identity = 283/432 (65.51%), Postives = 342/432 (79.17%), Query Frame = 1

Query: 4   LGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVD 63
           LG K TKY LC+ALN+CAKT N  LGLQ HA IV +G EDNL LNS LV+LY+KCNAIVD
Sbjct: 96  LGKKPTKYLLCTALNACAKTFNFRLGLQFHAGIVHMGHEDNLILNSALVDLYAKCNAIVD 155

Query: 64  AKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPS 123
           A+R+F  M+ HDQVSWTSII G S+ G  REAILM K ML T+ +PN FTY  VIS+C  
Sbjct: 156 ARRVFYGMERHDQVSWTSIICGFSKKGHQREAILMLKEMLSTEIKPNSFTYVGVISACSE 215

Query: 124 LKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVI 183
           +KD L   L  L HAHVIKLGF   ++FV+SS IDCYSK G I++AAL+F E   +D ++
Sbjct: 216 IKDGLEQGL--LLHAHVIKLGF-GGNNFVVSSLIDCYSKWGEIDQAALVFGETTERDIIL 275

Query: 184 FNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVT 243
            +SMISG+SQNLYGEEAL+LF EMR  NLSP +H LTSVLNACG+LTVL++G +VHSLVT
Sbjct: 276 LSSMISGYSQNLYGEEALRLFAEMRNMNLSPNEHALTSVLNACGNLTVLQEGSKVHSLVT 335

Query: 244 KMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALK 303
           KMGSE+NVFV  +L+DMYSKCG +D+A  +F+QTVEKN+++ TSMI  +AQ GRGS+AL+
Sbjct: 336 KMGSESNVFVASTLIDMYSKCGCIDEARCVFDQTVEKNTIMWTSMITGYAQSGRGSEALE 395

Query: 304 LFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDL 363
           LF+ L  EE F PDHVCFTAVLTACNH G L   + YFNKM ++Y L P+ID YACL+DL
Sbjct: 396 LFDHLAAEECFKPDHVCFTAVLTACNHVGFLEGGINYFNKMINDYGLIPEIDQYACLVDL 455

Query: 364 YARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPY 423
           YARNGH+ +AKELME+MP  ++YVMW S LG CK H EVELGRE A  LI+M+P NAAP+
Sbjct: 456 YARNGHLREAKELMEEMPCSASYVMWSSFLGFCKEHGEVELGREAAEHLIKMEPRNAAPF 515

Query: 424 VTLAHIYARAGL 436
           +TLAHIYARAG+
Sbjct: 516 ITLAHIYARAGV 524

BLAST of CmoCh01G005610 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 357.1 bits (915), Expect = 1.8e-98
Identity = 193/527 (36.62%), Postives = 307/527 (58.25%), Query Frame = 1

Query: 5   GAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDA 64
           G  L +YS  S L++C+   ++  G+Q+H+ I K  F  ++Y+ S LV++YSKC  + DA
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206

Query: 65  KRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSL 124
           +R+F  M   + VSW S+I+   QNG   EA+ +F+ ML ++  P+  T A+VIS+C SL
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266

Query: 125 KDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKD---- 184
                I +    H  V+K   L     + ++ +D Y+K  RI+EA  +F    +++    
Sbjct: 267 S---AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 326

Query: 185 --------------------------NVI-FNSMISGFSQNLYGEEALKLFVEMRASNLS 244
                                     NV+ +N++I+G++QN   EEAL LF  ++  ++ 
Sbjct: 327 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC 386

Query: 245 PTDHTLTSVLNACGSLTVLEQGRQVHSLVTK------MGSENNVFVVCSLLDMYSKCGSV 304
           PT ++  ++L AC  L  L  G Q H  V K       G E+++FV  SL+DMY KCG V
Sbjct: 387 PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCV 446

Query: 305 DDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTA 364
           ++ +++F + +E++ V   +MI+ FAQ G G++AL+LF  +L E G  PDH+    VL+A
Sbjct: 447 EEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSA 506

Query: 365 CNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKMPYESNYV 424
           C HAG + E   YF+ M  ++ + P  DHY C++DL  R G +E+AK ++E+MP + + V
Sbjct: 507 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 566

Query: 425 MWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYVTLAHIYARAGLWTQLADIRNQMQ 484
           +W SLL ACKVH  + LG+ VA +L+E++P N+ PYV L+++YA  G W  + ++R  M+
Sbjct: 567 IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMR 626

Query: 485 QKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYSKLNQLDLDMR 495
           ++ V K  G SWI+I    HVF V D +HP+  +I+S L+ L  +MR
Sbjct: 627 KEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669

BLAST of CmoCh01G005610 vs. TAIR10
Match: AT3G02330.1 (AT3G02330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 333.6 bits (854), Expect = 2.2e-91
Identity = 178/523 (34.03%), Postives = 301/523 (57.55%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA 60
           + S G    + SL     +CA    L  GLQI+   +K     ++ + +  +++Y KC A
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432

Query: 61  IVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISS 120
           + +A R+F  M+  D VSW +II+   QNG G E + +F +ML ++  P+ FT+ +++ +
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492

Query: 121 CP--SLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALL----FY 180
           C   SL   + IH      + ++K G    SS V  S ID YSK G IEEA  +    F 
Sbjct: 493 CTGGSLGYGMEIH------SSIVKSGMASNSS-VGCSLIDMYSKCGMIEEAEKIHSRFFQ 552

Query: 181 EANVKDN----------------VIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHT 240
            ANV                   V +NS+ISG+      E+A  LF  M    ++P   T
Sbjct: 553 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 612

Query: 241 LTSVLNACGSLTVLEQGRQVHSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTV 300
             +VL+ C +L     G+Q+H+ V K   +++V++  +L+DMYSKCG + D+ ++F +++
Sbjct: 613 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 672

Query: 301 EKNSVLSTSMIMAFAQCGRGSDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAV 360
            ++ V   +MI  +A  G+G +A++LFE ++  E   P+HV F ++L AC H GL+++ +
Sbjct: 673 RRDFVTWNAMICGYAHHGKGEEAIQLFERMIL-ENIKPNHVTFISILRACAHMGLIDKGL 732

Query: 361 EYFNKMGSEYRLDPQIDHYACLIDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKV 420
           EYF  M  +Y LDPQ+ HY+ ++D+  ++G V++A EL+ +MP+E++ V+W +LLG C +
Sbjct: 733 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTI 792

Query: 421 H-VEVELGREVAYRLIEMDPGNAAPYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGW 480
           H   VE+  E    L+ +DP +++ Y  L+++YA AG+W +++D+R  M+  +++K  G 
Sbjct: 793 HRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGC 852

Query: 481 SWIEIDKKAHVFSVGDATHPKSCEIYSKLNQLDLDMRGAEHAS 501
           SW+E+  + HVF VGD  HP+  EIY +L  +  +M+  + +S
Sbjct: 853 SWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSS 887

BLAST of CmoCh01G005610 vs. TAIR10
Match: AT3G49170.1 (AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 326.2 bits (835), Expect = 3.5e-89
Identity = 174/496 (35.08%), Postives = 292/496 (58.87%), Query Frame = 1

Query: 5   GAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA---I 64
           G +  K++L S  ++CA+  NL LG Q+H+  ++ G  D++     LV++Y+KC+A   +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSV 323

Query: 65  VDAKRIFVHMKTHDQVSWTSIISGLSQN-GAGREAILMFKNMLVTQDR--PNCFTYATVI 124
            D +++F  M+ H  +SWT++I+G  +N     EAI +F  M +TQ    PN FT+++  
Sbjct: 324 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM-ITQGHVEPNHFTFSSAF 383

Query: 125 SSCPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANV 184
            +C +L D     +         K G L  +S V +S I  + K  R+E+A   F   + 
Sbjct: 384 KACGNLSDP---RVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDAQRAFESLSE 443

Query: 185 KDNVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQV 244
           K+ V +N+ + G  +NL  E+A KL  E+    L  +  T  S+L+   ++  + +G Q+
Sbjct: 444 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 503

Query: 245 HSLVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRG 304
           HS V K+G   N  V  +L+ MYSKCGS+D A  +FN    +N +  TSMI  FA+ G  
Sbjct: 504 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFA 563

Query: 305 SDALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYA 364
              L+ F  ++ EEG  P+ V + A+L+AC+H GL++E   +FN M  ++++ P+++HYA
Sbjct: 564 IRVLETFNQMI-EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 623

Query: 365 CLIDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPG 424
           C++DL  R G +  A E +  MP++++ ++W + LGAC+VH   ELG+  A +++E+DP 
Sbjct: 624 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 683

Query: 425 NAAPYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPK 484
             A Y+ L++IYA AG W +  ++R +M+++ + K  G SWIE+  K H F VGD  HP 
Sbjct: 684 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 743

Query: 485 SCEIYSKLNQLDLDMR 495
           + +IY +L++L  +++
Sbjct: 744 AHQIYDELDRLITEIK 751

BLAST of CmoCh01G005610 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 323.2 bits (827), Expect = 2.9e-88
Identity = 160/476 (33.61%), Postives = 294/476 (61.76%), Query Frame = 1

Query: 17  LNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDAKRIFVHMKTHDQ 76
           L +C+   +L +G  +HAQ+ ++GF+ ++++ +GL+ LY+KC  +  A+ +F  +   ++
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185

Query: 77  --VSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSLKDELPIHLTT 136
             VSWT+I+S  +QNG   EA+ +F  M     +P+     +V+++   L+D   +    
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD---LKQGR 245

Query: 137 LFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVIFNSMISGFSQN 196
             HA V+K+G       +IS     Y+K G++  A +LF +    + +++N+MISG+++N
Sbjct: 246 SIHASVVKMGLEIEPDLLISLNT-MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 305

Query: 197 LYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVTKMGSENNVFVV 256
            Y  EA+ +F EM   ++ P   ++TS ++AC  +  LEQ R ++  V +    ++VF+ 
Sbjct: 306 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 365

Query: 257 CSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKLFESLLTEEGF 316
            +L+DM++KCGSV+ A ++F++T++++ V+ ++MI+ +   GR  +A+ L+ ++    G 
Sbjct: 366 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGV 425

Query: 317 LPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLYARNGHVEKAK 376
            P+ V F  +L ACNH+G++ E   +FN+M ++++++PQ  HYAC+IDL  R GH+++A 
Sbjct: 426 HPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAY 485

Query: 377 ELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYVTLAHIYARAG 436
           E+++ MP +    +W +LL ACK H  VELG   A +L  +DP N   YV L+++YA A 
Sbjct: 486 EVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR 545

Query: 437 LWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYSKLNQLD 491
           LW ++A++R +M++K + K  G SW+E+  +   F VGD +HP+  EI  ++  ++
Sbjct: 546 LWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 595

BLAST of CmoCh01G005610 vs. TAIR10
Match: AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 320.9 bits (821), Expect = 1.5e-87
Identity = 174/490 (35.51%), Postives = 286/490 (58.37%), Query Frame = 1

Query: 7   KLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVDAKR 66
           +L++ S  S +  CA    L    Q+H  +VK GF  +  + + L+  YSKC A++DA R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351

Query: 67  IFVHMK-THDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPSLK 126
           +F  +    + VSWT++ISG  QN    EA+ +F  M     RPN FTY+ ++++     
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----- 411

Query: 127 DELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVIFN 186
             LP+   +  HA V+K  +   SS V ++ +D Y KLG++EEAA +F   + KD V ++
Sbjct: 412 --LPVISPSEVHAQVVKTNYER-SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 471

Query: 187 SMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTV-LEQGRQVHSLVTK 246
           +M++G++Q    E A+K+F E+    + P + T +S+LN C +    + QG+Q H    K
Sbjct: 472 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 531

Query: 247 MGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALKL 306
              ++++ V  +LL MY+K G+++ A  +F +  EK+ V   SMI  +AQ G+   AL +
Sbjct: 532 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 591

Query: 307 FESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDLY 366
           F+ +   +  + D V F  V  AC HAGL+ E  +YF+ M  + ++ P  +H +C++DLY
Sbjct: 592 FKEMKKRKVKM-DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 651

Query: 367 ARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPYV 426
           +R G +EKA +++E MP  +   +W ++L AC+VH + ELGR  A ++I M P ++A YV
Sbjct: 652 SRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYV 711

Query: 427 TLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIYS 486
            L+++YA +G W + A +R  M ++ V+K  G+SWIE+  K + F  GD +HP   +IY 
Sbjct: 712 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYM 771

Query: 487 KLNQLDLDMR 495
           KL  L   ++
Sbjct: 772 KLEDLSTRLK 772

BLAST of CmoCh01G005610 vs. NCBI nr
Match: gi|659072298|ref|XP_008464861.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo])

HSP 1 Score: 882.5 bits (2279), Expect = 3.6e-253
Identity = 432/505 (85.54%), Postives = 469/505 (92.87%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA 60
           MCSLGAKLT YSLCSAL+SCAKT NLFLGLQIHAQIVKIGFE+NL+LNS LV+LYSKCNA
Sbjct: 1   MCSLGAKLTTYSLCSALSSCAKTHNLFLGLQIHAQIVKIGFEENLFLNSSLVDLYSKCNA 60

Query: 61  IVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISS 120
           IV+AKR+F  MKTHDQVSWTSIISGLSQNG G EAILMFK MLVTQ RPNCFTYATVISS
Sbjct: 61  IVNAKRVFSRMKTHDQVSWTSIISGLSQNGCGSEAILMFKKMLVTQVRPNCFTYATVISS 120

Query: 121 CPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKD 180
           CP+LK+EL IHL TL HAHVIK GF F SSFVISS IDCYSKLGRI+EA+LLF E +VKD
Sbjct: 121 CPTLKNELQIHLATLLHAHVIKFGFTF-SSFVISSTIDCYSKLGRIQEASLLFSETSVKD 180

Query: 181 NVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHS 240
           N+IFNSMISG+SQNL GEEALKLFVEMRASNLSPTDHTLTSVLNACG LTVLEQGRQVHS
Sbjct: 181 NIIFNSMISGYSQNLCGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQVHS 240

Query: 241 LVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSD 300
           L+TKMGSENNVFVVCSLLDMYSKCGS+D+AF +FNQTV+KNSVLSTSMIMAFAQCGRG +
Sbjct: 241 LLTKMGSENNVFVVCSLLDMYSKCGSIDEAFSLFNQTVQKNSVLSTSMIMAFAQCGRGLE 300

Query: 301 ALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACL 360
           ALKLFE L TE+ F+PDH+CFTAVLTACNHAGLL+EAVEYFNKM  EY+LDPQIDHYACL
Sbjct: 301 ALKLFECLSTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRCEYQLDPQIDHYACL 360

Query: 361 IDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNA 420
           IDLYARNG+VEKAK++ME+MPYESNYVMWCSLLGACKVH EVELGREVAYRLIEMDP NA
Sbjct: 361 IDLYARNGNVEKAKQMMEQMPYESNYVMWCSLLGACKVHAEVELGREVAYRLIEMDPRNA 420

Query: 421 APYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSC 480
           APY+TLAHIYARAGLWTQ+ +IR +MQQKRVRKSAGWSWIEIDKK HVFSVGDA HPKSC
Sbjct: 421 APYLTLAHIYARAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTHVFSVGDAAHPKSC 480

Query: 481 EIYSKLNQLDLDMRGAEHASKALEF 506
           EIYSKL+QL+LDM+ AE + KALE+
Sbjct: 481 EIYSKLDQLNLDMKAAEQSPKALEY 504

BLAST of CmoCh01G005610 vs. NCBI nr
Match: gi|778658982|ref|XP_011653616.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis sativus])

HSP 1 Score: 879.4 bits (2271), Expect = 3.0e-252
Identity = 433/505 (85.74%), Postives = 469/505 (92.87%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA 60
           MCSLGA LTKYSLCSAL+SCAKT NLFLGLQIHAQIVKIGFE+NL+LNS LV+LYSKCNA
Sbjct: 1   MCSLGAILTKYSLCSALSSCAKTHNLFLGLQIHAQIVKIGFEENLFLNSSLVDLYSKCNA 60

Query: 61  IVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISS 120
           IV+AKR+F  MKTHD VSWTSIISGLSQNG G EAILMFKNMLVTQ RPNCFTYATVISS
Sbjct: 61  IVNAKRVFSQMKTHDHVSWTSIISGLSQNGCGSEAILMFKNMLVTQVRPNCFTYATVISS 120

Query: 121 CPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKD 180
           CP+LK+EL IHL TL HAHVIK GF F SSFVISS IDCYSKLGRI EAALLF E++VKD
Sbjct: 121 CPTLKNELQIHLATLLHAHVIKFGFTF-SSFVISSTIDCYSKLGRIREAALLFSESSVKD 180

Query: 181 NVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHS 240
           N+IFNSMISG+SQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACG LTVLEQGRQVHS
Sbjct: 181 NIIFNSMISGYSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGCLTVLEQGRQVHS 240

Query: 241 LVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSD 300
           LVTKMGSENNVFVVCSLLDMYSKCGS+D+AF IFNQTV+KNSVLSTSMI AFAQCGRG +
Sbjct: 241 LVTKMGSENNVFVVCSLLDMYSKCGSIDEAFSIFNQTVQKNSVLSTSMITAFAQCGRGLE 300

Query: 301 ALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACL 360
           ALKLFESLLTE+ F+PDH+CFTAVLTACNHAGLL+EAVEYFNKM  EY LDPQIDHYACL
Sbjct: 301 ALKLFESLLTEDSFVPDHICFTAVLTACNHAGLLDEAVEYFNKMRREYHLDPQIDHYACL 360

Query: 361 IDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNA 420
           IDLYARNG+VEKAK++ME+MPYESNYV+ CSLLGACKVH EVELGREVA+RLIEMDP NA
Sbjct: 361 IDLYARNGNVEKAKQMMEQMPYESNYVVLCSLLGACKVHAEVELGREVAHRLIEMDPSNA 420

Query: 421 APYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSC 480
           APY+TLAHI A+AGLWTQ+ +IR +MQQKRVRKSAGWSWIEIDKK HVFSVGDA HPKSC
Sbjct: 421 APYLTLAHISAKAGLWTQVGEIRKEMQQKRVRKSAGWSWIEIDKKTHVFSVGDAAHPKSC 480

Query: 481 EIYSKLNQLDLDMRGAEHASKALEF 506
           EIYSKL+QL+LDM+ AE +SKALE+
Sbjct: 481 EIYSKLDQLNLDMKAAEQSSKALEY 504

BLAST of CmoCh01G005610 vs. NCBI nr
Match: gi|1009145621|ref|XP_015890433.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujuba])

HSP 1 Score: 673.3 bits (1736), Expect = 3.3e-190
Identity = 325/501 (64.87%), Postives = 404/501 (80.64%), Query Frame = 1

Query: 4   LGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNAIVD 63
           +G KLTKYSLC+ALNSCAKT+N  LGLQIHA ++KIG+EDNL+LN+ LV+LY+KCNA+VD
Sbjct: 4   VGRKLTKYSLCTALNSCAKTLNWRLGLQIHAHVIKIGYEDNLFLNTALVDLYAKCNAVVD 63

Query: 64  AKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISSCPS 123
           ++RIF  MK HDQVSWTSII+G SQNG G EAI MFK ML T+ +PN FTY +VIS+C  
Sbjct: 64  SRRIFYCMKRHDQVSWTSIITGFSQNGHGIEAISMFKAMLSTEIKPNSFTYVSVISACTR 123

Query: 124 LKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKDNVI 183
           L   L     +L HAHV++LGF   +SFV+S+ IDCYSK G +++AALLF E   +DN++
Sbjct: 124 LTGALK--QVSLLHAHVMRLGF-DENSFVVSTLIDCYSKWGAMDQAALLFSETADRDNIL 183

Query: 184 FNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHSLVT 243
           FNSMISG+SQNLY EEALKLF+EMR  +LSPT HTLTS+LNACGSL VL+QG Q+HSLVT
Sbjct: 184 FNSMISGYSQNLYSEEALKLFMEMRNKHLSPTSHTLTSILNACGSLAVLQQGCQIHSLVT 243

Query: 244 KMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSDALK 303
           KMGSE+NVFVV +L+DMYSKCGS+D A  +F++TVEKNSVL TSMIM +AQ GRG DAL+
Sbjct: 244 KMGSESNVFVVSALIDMYSKCGSIDWARYVFDRTVEKNSVLWTSMIMGYAQSGRGLDALE 303

Query: 304 LFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACLIDL 363
           LFE    EE F PDH+CFTAVLTACNHAGLL   V+YFN+M  +Y L P++D YACL+DL
Sbjct: 304 LFEHAKAEERFTPDHICFTAVLTACNHAGLLERGVDYFNQMRQDYGLVPELDQYACLVDL 363

Query: 364 YARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNAAPY 423
           YARNG + KAKEL+++MPY+ NYVMW S L +CK+  EV+L RE A +LIEMDP NAAPY
Sbjct: 364 YARNGRLRKAKELIKEMPYKPNYVMWTSFLSSCKIDGEVDLAREAAQKLIEMDPSNAAPY 423

Query: 424 VTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSCEIY 483
           VTL+HIYARAGLW ++A++R  MQQK +RKSAGWSW+E+DK  HVFSV D  HP + +IY
Sbjct: 424 VTLSHIYARAGLWDEVAEVRKSMQQKAIRKSAGWSWVEVDKVVHVFSVSDIAHPCTGDIY 483

Query: 484 SKLNQLDLDMRGAEHASKALE 505
            +L +L+++M+   +  K +E
Sbjct: 484 VELEKLNMEMKETSYMLKQIE 501

BLAST of CmoCh01G005610 vs. NCBI nr
Match: gi|225468012|ref|XP_002270478.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Vitis vinifera])

HSP 1 Score: 647.5 bits (1669), Expect = 1.9e-182
Identity = 313/494 (63.36%), Postives = 395/494 (79.96%), Query Frame = 1

Query: 1   MCSLGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA 60
           M + G K TK+ LC+ALNSCAK +N  LG+QIHA+I++ GFEDNL+LNS LV+LY+KC+A
Sbjct: 92  MNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDA 151

Query: 61  IVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISS 120
           IVDAKR+F  M+ HDQVSWTSIISG S+NG G+EAIL FK ML +Q +PNC TY +VIS+
Sbjct: 152 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISA 211

Query: 121 CPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKD 180
           C  L  E       L HAHV+KLGF    +FV+S  IDCYSK GRI++A LLF     +D
Sbjct: 212 CTGL--ETIFDQCALLHAHVVKLGF-GVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERD 271

Query: 181 NVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHS 240
           N++FNSMISG+SQNL+GEEALKLFVEMR + L+PTDHTLTS+LNACGSLT+L+QGRQVHS
Sbjct: 272 NILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHS 331

Query: 241 LVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSD 300
           LV KMGSE+NVFVV +LLDMYSKCGS+D+A  +F+Q VEKN+VL TSMI  +AQ GRG +
Sbjct: 332 LVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPE 391

Query: 301 ALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACL 360
            L LFE L+TEEGF PDH+CFTAVLTACNHAG L++ ++YFN+M  +Y L P +D YACL
Sbjct: 392 GLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACL 451

Query: 361 IDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNA 420
           +DLY RNGH+ KAKELME +P E N VMW S L +CK++ E ELGRE A +L +M+P + 
Sbjct: 452 VDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCST 511

Query: 421 APYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSC 480
           APYV +A IYA+AGLW+++ +IR  M+QK +RKSAGWSW+E+DK+ HVF V DA+HP+S 
Sbjct: 512 APYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFLVADASHPRSR 571

Query: 481 EIYSKLNQLDLDMR 495
           +I  +L +L+L+M+
Sbjct: 572 DICVELERLNLEMK 582

BLAST of CmoCh01G005610 vs. NCBI nr
Match: gi|147818972|emb|CAN67116.1| (hypothetical protein VITISV_026465 [Vitis vinifera])

HSP 1 Score: 639.8 bits (1649), Expect = 4.0e-180
Identity = 310/494 (62.75%), Postives = 389/494 (78.74%), Query Frame = 1

Query: 1    MCSLGAKLTKYSLCSALNSCAKTINLFLGLQIHAQIVKIGFEDNLYLNSGLVNLYSKCNA 60
            M + G K TK+ LC+ALNSCAK +N  LG+QIHA+I++ GFEDNL+LNS LV+LY+KC+A
Sbjct: 1307 MNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDA 1366

Query: 61   IVDAKRIFVHMKTHDQVSWTSIISGLSQNGAGREAILMFKNMLVTQDRPNCFTYATVISS 120
            IVDAKR+F  M+ HDQVSWTSIISG S+NG G+EAIL FK ML +Q +PNC TY + IS+
Sbjct: 1367 IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISA 1426

Query: 121  CPSLKDELPIHLTTLFHAHVIKLGFLFFSSFVISSAIDCYSKLGRIEEAALLFYEANVKD 180
            C  L  E       L HAHV+KLGF    +FV+S  IDCYSK GRI++A LLF     +D
Sbjct: 1427 CTGL--ETIFDQCALLHAHVVKLGF-GVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERD 1486

Query: 181  NVIFNSMISGFSQNLYGEEALKLFVEMRASNLSPTDHTLTSVLNACGSLTVLEQGRQVHS 240
            N++FNSMISG+SQNL GEEALKLFV+MR + L PTDHTLTS+LNACGSLT+L+QGRQVHS
Sbjct: 1487 NILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHS 1546

Query: 241  LVTKMGSENNVFVVCSLLDMYSKCGSVDDAFIIFNQTVEKNSVLSTSMIMAFAQCGRGSD 300
            LV KMGSE+NVFVV +LLDMYSKCGS+D+A  +F Q VEKN+VL TSMI  +AQ GRG +
Sbjct: 1547 LVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPE 1606

Query: 301  ALKLFESLLTEEGFLPDHVCFTAVLTACNHAGLLNEAVEYFNKMGSEYRLDPQIDHYACL 360
             L LFE L+ EEGF PDH+CFTAVLTACNHAG L++ ++YFN+M  +Y L P +D YACL
Sbjct: 1607 GLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACL 1666

Query: 361  IDLYARNGHVEKAKELMEKMPYESNYVMWCSLLGACKVHVEVELGREVAYRLIEMDPGNA 420
            +DLY RNGH+ KAKELME  P E N VMW S L +CK++ E ELGRE A +L +M+P + 
Sbjct: 1667 VDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCST 1726

Query: 421  APYVTLAHIYARAGLWTQLADIRNQMQQKRVRKSAGWSWIEIDKKAHVFSVGDATHPKSC 480
            APYV +A IYA+AGLW+++ +IR  M+QK +RKSAGWSW+E+DK+ HVF V DA+HP+S 
Sbjct: 1727 APYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFXVADASHPRSR 1786

Query: 481  EIYSKLNQLDLDMR 495
            +I  +L +L+L+M+
Sbjct: 1787 DICVELERLNLEMK 1797

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP151_ARATH3.3e-9736.62Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
PP207_ARATH3.9e-9034.03Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN... [more]
PP272_ARATH6.2e-8835.08Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
PP224_ARATH5.2e-8733.61Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
PP172_ARATH2.6e-8635.51Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A5ATH6_VITVI2.8e-18062.75Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026465 PE=3 SV=1[more]
I1KI78_SOYBN7.9e-17561.28Uncharacterized protein OS=Glycine max GN=GLYMA_07G068600 PE=4 SV=2[more]
A0A0B2R406_GLYSO7.9e-17561.28Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_031026 PE... [more]
V7BWT6_PHAVU3.8e-16159.11Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G155900g PE=4 SV=1[more]
W9SEZ6_9ROSA4.7e-15965.51Pentatricopeptide repeat-containing protein OS=Morus notabilis GN=L484_016093 PE... [more]
Match NameE-valueIdentityDescription
AT2G13600.11.8e-9836.62 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G02330.12.2e-9134.03 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G49170.13.5e-8935.08 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G12770.12.9e-8833.61 mitochondrial editing factor 22[more]
AT2G27610.11.5e-8735.51 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659072298|ref|XP_008464861.1|3.6e-25385.54PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m... [more]
gi|778658982|ref|XP_011653616.1|3.0e-25285.74PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis s... [more]
gi|1009145621|ref|XP_015890433.1|3.3e-19064.87PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ziziphus jujub... [more]
gi|225468012|ref|XP_002270478.1|1.9e-18263.36PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Vitis vin... [more]
gi|147818972|emb|CAN67116.1|4.0e-18062.75hypothetical protein VITISV_026465 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0080156 mitochondrial mRNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005515 protein binding
molecular_function GO:0043167 ion binding
molecular_function GO:0017111 nucleoside-triphosphatase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G005610.1CmoCh01G005610.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 319..345
score: 0.0021coord: 357..381
score: 1.0E-4coord: 255..280
score: 0.1coord: 155..175
score: 0.066coord: 286..309
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 179..226
score: 4.1E-11coord: 75..121
score: 7.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 357..385
score: 7.2E-5coord: 182..215
score: 5.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 180..214
score: 10.994coord: 149..179
score: 6.588coord: 250..280
score: 7.52coord: 317..347
score: 7.794coord: 281..316
score: 9.021coord: 353..383
score: 8.155coord: 419..453
score: 7.454coord: 215..249
score: 5.437coord: 75..109
score: 9.219coord: 44..74
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 158..180
score: 4.7E-11coord: 248..380
score: 4.7E-11coord: 413..441
score: 4.7
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 251..438
score: 1.0
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..460
score: 8.2E
NoneNo IPR availablePANTHERPTHR24015:SF447SUBFAMILY NOT NAMEDcoord: 1..460
score: 8.2E

The following gene(s) are paralogous to this gene:

None