Csa1G042590 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G042590
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein F25P22.19
Location	Chr1 : 4374153 .. 4375896 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATGGGTCTAAACCCTAAAACTGTAAAGAAACGCCATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGGTAAATTAGTATTCAATTTGAAAATCATTTCTCAAATTTGGGCACTGTGGACTATACTCTCCAGGAATTTCTAAGCATGAGTCATCGCCTTCTATCATATTTTATTGGTATAGCTCATAATTGTGGGATTTCAAGTTCAGAGATCTTTTTTTTTACTTTCAAATTGTGTCTTCATTTCATGAGATGGTTCTTCGTAATTTTACAGTTGGTCGGATAATTGCCATGTTTTTTTTTGCCTTACTTAAGATTATTGTACATTTTTTTGTCATTCTGTTGAAAACTGATATGAAGAGGTATATTTTTTCCAGTTTAATTGTTTGAGTTCTTGAGTTGATGTTAGTTTAGCACCATAGTTGACTATAAAATCTTGGATTTATATCCTCTTCTCACGTGTAGGTTGTTTAATTCTGGAAATTTTAGAATAGATGTGTTAAGAAGCGTTTGTTGAAGAAAGTACTTTTAATCAAGAGACTTCCGTTATAAGTAACCGGAAAAGTAGTGAAATGAAAGTTGATTTTGTTTGTTGGTTGTTGGTTCTGTATATTGGAAGTTCTTTTAATTAAATTAGAGATAGGTTTTGAATGAATATTTTGAGAAAGATGTGAGAATAATTAGAATTACAAAGCAATTAAGTGAGGAAAATAGAGATCAATGAGAGAAAGCAAAAGAGCTCAGAAAAATAGAAGGGAAATCTGGAAAAGAAAGTGAGTAGAAAGAGTTTAGTGCAAAGAGATATTAAGAAAAAGGTGTTCACAGAGAAATGTTAATGAAAGAGTTTGTATTTTGAGAAATGAAGGATAATGTATTTTAGTCAAAGATACTTGATAGAACATCTATGATCTACCATTCACTTGTTCAAAAAATACGACTGATCTTAGTGAAATTAACCATTTAAATAGTACTTCTGTTAAAAGATGTGTAAAGTTCTTGTTATTTCTGGATCAATTTTTGGTAGTATGATTAATTTTTGTTTTTGAGCTTCTTCATTTGGTGTTCCTTTTCTGGAATCTTAGACTTATGATTTAGAAGCTAATACAGAAATGATTTATCTGTGAATTCAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAAGATAATGCGAAGCTTATAGTTTATGATGATGTTAGATTATTTTACGTTTTAAGTGAATTCTATCCCCCAACTTTTACTTACTTCAATTCAATTGGATGGAGTGGGCTTTAGGATTATTATTTCAAATCTTTTGTCATATAAATGTACAATTATTCACTTGGGTTTAGCACAACATTG

mRNA sequence

ATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAA

Coding sequence (CDS)

ATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAA

Protein sequence

MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI*

Homology

[Close]

BLAST of Csa1G042590 vs. TrEMBL
Match: A0A0A0LT17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042590 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.2e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of Csa1G042590 vs. TrEMBL
Match: A0A103Y8I5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017205 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-16
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 47  NDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHED 106
           N  Y+E +  +N+++  ++DVS+ EL+ +IDKFY+G D +++P IFE+ILKRKL+GKHE+
Sbjct: 48  NSYYSE-DEIQNENTANEEDVSSAELRTQIDKFYKG-DIEAIPTIFESILKRKLAGKHEE 107

Query: 107 ADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +DDELM E RQ  P EV D    E +DSD      +D+  DSEE
Sbjct: 108 SDDELMNEFRQDQPSEVSD----EVFDSD------TDSDSDSEE 139

[Close]

BLAST of Csa1G042590 vs. TrEMBL
Match: A0A0K9Q7A5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212600 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-15
Identity = 49/106 (46.23%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 49  KYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDAD 108
           K +++ +T + D+  DDD++TEELKR+I ++ + GD + LP+IFEAIL RKLSGKH+DAD
Sbjct: 48  KSSDVQTTNHPDA--DDDITTEELKRRIIRYMKEGDTEVLPSIFEAILVRKLSGKHDDAD 107

Query: 109 DELMKEIRQQLPGEVED-FKGEEEY-DSDLMDDDSSDASDDSEEED 153
           +ELM+E R +   + +D F+ +E+  +SD    +S +   DS EED
Sbjct: 108 NELMEEFRSKTQQDEDDRFQSDEDLTESDKDVTESDEELTDSSEED 151

[Close]

BLAST of Csa1G042590 vs. TrEMBL
Match: A0A0D2LVI9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G067600 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-15
Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 1


Query: 32  LSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAI 91
           L+  + S +R YS+  D               +DDVS +ELKR+I KF +G D D++P+I
Sbjct: 21  LAALTRSQIRFYSTNGDD--------------NDDVSNKELKRRIQKFLDG-DEDAIPSI 80

Query: 92  FEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSD 144
           FE ILKRKLSGKHE++DDELMKEIR +    ++D   + E+DSDL D   +D
Sbjct: 81  FEGILKRKLSGKHEESDDELMKEIRGEWKQPLDD-ADDLEFDSDLTDSSGTD 116

[Close]

BLAST of Csa1G042590 vs. TrEMBL
Match: A0A078I4R8_BRANA (BnaC02g22450D protein OS=Brassica napus GN=BnaC02g22450D PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.3e-14
Identity = 40/96 (41.67%), Postives = 66/96 (68.75%), Query Frame = 1


Query: 55  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKE 114
           S++++ S  D+ VS EELK++I  F E GD D+LP +FEA++ RKLSGKH+++DDE+M+E
Sbjct: 49  SSESRGSGSDEVVSKEELKKRIQSFLEDGDEDALPDLFEAMMTRKLSGKHDESDDEVMEE 108

Query: 115 IRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +R+    +  +   +     DL D DS D+ ++S++
Sbjct: 109 VRKYPINDAHNKVDDNVESDDLSDGDSPDSDEESDD 144

[Close]

BLAST of Csa1G042590 vs. TAIR10
Match: AT1G73770.1 (AT1G73770.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1


Query: 55  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKE 114
           S  ++    ++ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  
Sbjct: 52  SDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDV 111

Query: 115 IRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEED 153
           +R+     V D    ++ DSD+  D   D+SD   E D
Sbjct: 112 VRKY---PVNDAHKVDDIDSDIESDGHGDSSDSDIESD 146

[Close]

BLAST of Csa1G042590 vs. TAIR10
Match: AT4G21460.1 (AT4G21460.1 Ribosomal protein S24/S35, mitochondrial)

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 42/123 (34.15%), Postives = 70/123 (56.91%), Query Frame = 1


Query: 30  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFY 89
           P L+P +     ++   + +  E ++T          +K  LV +DVS +ELK +IDK +
Sbjct: 27  PFLTPIAAPAPPKFRFFSSESGENSTTATESSPTDSSDKKDLVVEDVSNKELKSRIDKSF 86

Query: 90  EGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDD 144
             G+ D+LP + EA+L+R+L  KH + DDELM++I + LP   +D   +E+++SD  +  
Sbjct: 87  NEGNEDALPGVIEALLQRRLVDKHAETDDELMEKI-ESLP--FKDDVKDEDFESDFEEAH 146

[Close]

BLAST of Csa1G042590 vs. TAIR10
Match: AT3G18240.1 (AT3G18240.1 Ribosomal protein S24/S35, mitochondrial)

HSP 1 Score: 70.9 bits (172), Expect = 8.1e-13
Identity = 40/123 (32.52%), Postives = 71/123 (57.72%), Query Frame = 1


Query: 30  PLLSPFSVSTLRRYSSGNDKYNELNSTK---------NKDSLVDDDVSTEELKRKIDKFY 89
           P L+P +     ++   + +  E ++T           K  LV +DVS +ELK +I+K++
Sbjct: 31  PFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEKKDLVVEDVSNKELKSRIEKYF 90

Query: 90  EGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDD 144
             G+ D+LP + EA+L+R+L  KH + DDEL+++I + LP   +D   +E+++SD  +  
Sbjct: 91  NEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI-ESLP--FKDDVKDEDFESDFEEAH 150

[Close]

BLAST of Csa1G042590 vs. NCBI nr
Match: gi|449439425|ref|XP_004137486.1| (PREDICTED: histone chaperone RTT106 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of Csa1G042590 vs. NCBI nr
Match: gi|659066786|ref|XP_008461340.1| (PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 2.7e-66
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GE+EDFKG EEYDS+L D    DA+ DSEEED+RI
Sbjct: 121 GEIEDFKG-EEYDSELTD----DAASDSEEEDKRI 150

[Close]

BLAST of Csa1G042590 vs. NCBI nr
Match: gi|976919599|gb|KVI04479.1| (hypothetical protein Ccrd_017205 [Cynara cardunculus var. scolymus])

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-16
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 47  NDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHED 106
           N  Y+E +  +N+++  ++DVS+ EL+ +IDKFY+G D +++P IFE+ILKRKL+GKHE+
Sbjct: 48  NSYYSE-DEIQNENTANEEDVSSAELRTQIDKFYKG-DIEAIPTIFESILKRKLAGKHEE 107

Query: 107 ADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +DDELM E RQ  P EV D    E +DSD      +D+  DSEE
Sbjct: 108 SDDELMNEFRQDQPSEVSD----EVFDSD------TDSDSDSEE 139

[Close]

BLAST of Csa1G042590 vs. NCBI nr
Match: gi|645269937|ref|XP_008240227.1| (PREDICTED: uncharacterized protein LOC103338759 [Prunus mume])

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVST---LRRYSSGNDKYNELNSTK 60
           MKR L   +  +Y+ T  +SPP      R  L+P + ST   LR YS+ +  +N+     
Sbjct: 1   MKRLLLRNL-RLYARTRLLSPPCYNPGPRSQLAPLAASTRPRLRFYSTESPSHNQ----- 60

Query: 61  NKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEI-- 120
                 +DDVS EELK +IDK++ G D +++P+IFEAILKRKL+GKHE+ D++LM+EI  
Sbjct: 61  ------EDDVSNEELKMQIDKYFRG-DEEAIPSIFEAILKRKLTGKHEEDDEKLMEEIPG 120

Query: 121 -RQQLPGEVEDFKGEEEYDSDLMDDDSSD 144
            RQ+ P  + D   E+E  SD  +   SD
Sbjct: 121 KRQEEP--LSDIDDEQETKSDFDEGSESD 134

[Close]

BLAST of Csa1G042590 vs. NCBI nr
Match: gi|902076907|gb|KNA03077.1| (hypothetical protein SOVF_212600 [Spinacia oleracea])

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-15
Identity = 49/106 (46.23%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 49  KYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDAD 108
           K +++ +T + D+  DDD++TEELKR+I ++ + GD + LP+IFEAIL RKLSGKH+DAD
Sbjct: 48  KSSDVQTTNHPDA--DDDITTEELKRRIIRYMKEGDTEVLPSIFEAILVRKLSGKHDDAD 107

Query: 109 DELMKEIRQQLPGEVED-FKGEEEY-DSDLMDDDSSDASDDSEEED 153
           +ELM+E R +   + +D F+ +E+  +SD    +S +   DS EED
Sbjct: 108 NELMEEFRSKTQQDEDDRFQSDEDLTESDKDVTESDEELTDSSEED 151

The following BLAST results are available for this feature:

BLAST of Csa1G042590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT17_CUCSA	9.2e-82	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042590 PE=4 SV=1	[more]
A0A103Y8I5_CYNCS	3.0e-16	49.04	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017205 PE=4 ...	[more]
A0A0K9Q7A5_SPIOL	1.9e-15	46.23	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212600 PE=4 SV=1	[more]
A0A0D2LVI9_GOSRA	2.5e-15	46.43	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G067600 PE=4 SV=1	[more]
A0A078I4R8_BRANA	6.3e-14	41.67	BnaC02g22450D protein OS=Brassica napus GN=BnaC02g22450D PE=4 SV=1	[more]

BLAST of Csa1G042590 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73770.1	1.5e-14	38.78	FUNCTIONS IN: molecular_function unknown	[more]
AT4G21460.1	4.7e-13	34.15	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.1	8.1e-13	32.52	Ribosomal protein S24/S35, mitochondrial	[more]

BLAST of Csa1G042590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439425\|ref\|XP_004137486.1\|	1.3e-81	100.00	PREDICTED: histone chaperone RTT106 [Cucumis sativus]	[more]
gi\|659066786\|ref\|XP_008461340.1\|	2.7e-66	87.10	PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]	[more]
gi\|976919599\|gb\|KVI04479.1\|	4.3e-16	49.04	hypothetical protein Ccrd_017205 [Cynara cardunculus var. scolymus]	[more]
gi\|645269937\|ref\|XP_008240227.1\|	1.3e-15	41.61	PREDICTED: uncharacterized protein LOC103338759 [Prunus mume]	[more]
gi\|902076907\|gb\|KNA03077.1\|	2.8e-15	46.23	hypothetical protein SOVF_212600 [Spinacia oleracea]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016740	transferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU105429	cucumber EST collection version 3.0	transcribed_cluster
CU125890	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G042590.1	Csa1G042590.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU105429	CU105429	transcribed_cluster
CU125890	CU125890	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G042590	Cla018955	Watermelon (97103) v1	cuwmB096
Csa1G042590	Cla018477	Watermelon (97103) v1	cuwmB062
Csa1G042590	MELO3C017325	Melon (DHL92) v3.5.1	cumeB056
Csa1G042590	MELO3C002109	Melon (DHL92) v3.5.1	cumeB027
Csa1G042590	ClCG06G014600	Watermelon (Charleston Gray)	cuwcgB083
Csa1G042590	ClCG04G010900	Watermelon (Charleston Gray)	cuwcgB057
Csa1G042590	Lsi02G002110	Bottle gourd (USVL1VR-Ls)	culsiB022
Csa1G042590	Lsi06G013140	Bottle gourd (USVL1VR-Ls)	culsiB072
Csa1G042590	MELO3C002109.2	Melon (DHL92) v3.6.1	cumedB022
Csa1G042590	MELO3C017325.2	Melon (DHL92) v3.6.1	cumedB048
Csa1G042590	Cla97C04G077710	Watermelon (97103) v2	cuwmbB054
Csa1G042590	Cla97C06G124120	Watermelon (97103) v2	cuwmbB080
Csa1G042590	Bhi08G001051	Wax gourd	cuwgoB028
Csa1G042590	CSPI01G04010	Wild cucumber (PI 183967)	cpicuB006
Csa1G042590	CSPI01G06990	Wild cucumber (PI 183967)	cpicuB000
Csa1G042590	Cucsa.111230	Cucumber (Gy14) v1	cgycuB139
Csa1G042590	Cucsa.121720	Cucumber (Gy14) v1	cgycuB159
Csa1G042590	CmaCh10G003090	Cucurbita maxima (Rimu)	cmacuB056
Csa1G042590	CmaCh13G010080	Cucurbita maxima (Rimu)	cmacuB217
Csa1G042590	CmaCh11G002900	Cucurbita maxima (Rimu)	cmacuB088
Csa1G042590	CmoCh13G010460	Cucurbita moschata (Rifu)	cmocuB202
Csa1G042590	CmoCh10G003320	Cucurbita moschata (Rifu)	cmocuB046
Csa1G042590	Cp4.1LG18g07070	Cucurbita pepo (Zucchini)	cpecuB369
Csa1G042590	Cp4.1LG20g01330	Cucurbita pepo (Zucchini)	cpecuB505
Csa1G042590	CsGy1G003930	Cucumber (Gy14) v2	cgybcuB004
Csa1G042590	Carg04829	Silver-seed gourd	carcuB0415

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa1G042590	Csa1G024260	Cucumber (Chinese Long) v2	cucuB000

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G042590	Silver-seed gourd	carcuB0542
Csa1G042590	Silver-seed gourd	carcuB0623
Csa1G042590	Silver-seed gourd	carcuB0802
Csa1G042590	Cucurbita maxima (Rimu)	cmacuB390
Csa1G042590	Cucurbita moschata (Rifu)	cmocuB077
Csa1G042590	Cucurbita moschata (Rifu)	cmocuB380
Csa1G042590	Cucurbita pepo (Zucchini)	cpecuB029
Csa1G042590	Cucurbita pepo (Zucchini)	cpecuB655
Csa1G042590	Cucumber (Gy14) v2	cgybcuB001