CSPI01G06990 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G06990
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ribosomal protein S24/S35, mitochondrial
Location	Chr1 : 4403030 .. 4404842 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGATCATAAACCCTCAGAAAATGGGTCTAAACCCTAAAACTGTAAAGAAACGCCATGAAGCGAGCTTTATGGGGAGCTGTCTTCAACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGGTAAATTAGTATTCAATTTGAAAATCATTTCTCAAATTTGGGCACTGTGGACTATACTCTCCAGGAATTTCTAAGCATGAGTCATCGCCTTCTATCATATTTTATTGGTATAGCTCATAATTGTGGGATTTCATGTTCAGAGATCTTTTTTTTTACTTTCAAATTGTGTCTTCATTTCATGAGATGGTTCTTCGTAATTTTACAGTTGGTCGGATAATTGCCATGTTTTTTTTTGCCTTACTTAAGATTATTGTACATTTTTTTGTCATTCTGTTGAAAACTGATATGAAGAGGTATATTTTTTCCAGTTTAATTGTTTGAGTTCTTGAGTTGATGTTAGTTTAGCACCATAGTTGACTATAAAATCTTGGATTTATATCCTCTTCTCACGTGTAGGTTGTTTAATTCTGGAAATTTTAGAATAGATGTGTTAAGAAGCGTTTGTTGAAGAAAGTACTTTTAATCAAGAGACTTCCGTTATAAGTAACCGGAAAAGTAGTGAAATGAAAGTTGATTTTGTTTGTTGGTTGTTGGTTCTGTATATTGGAAGTTCTTTAATTAAATTAGAGATAGGTTTTGAATGAATATTTTGAGAAAGATGTGAGAATAATTAGAATTACAAAGCAATTAAGTGAGGAAAATAGAGATCAATGAGAGAAAGCAAAAGAGCTCAGAAAAATAGAAGGGAAATCTGGAAAAGAAAGTGAGTAGAAAGAGTTTAGTGCAAAGAGATATTAAGAAAAAGGTGTTCACAGAGAAATGTTAATGAAAGAGTTTGTATTTTGAGAAATGAAGAATAATGTATTTTAGTCAAAGATACTTGATAGAACATCTATGATCTACCATTCACTTGTTCAAAAAATACGACTGATCTTAGTGAAATTAACCATTTAAATAGTACTTCTGTTAAAAGATGTGTAAAGTTCTTGTTATTTCTGGATCAATTTTTGGTAGTATGATTAATTTTTGTTTTTGAGCTTCTTCATTTGGTGTTCCTTTTCTGGAATCTTAGACTTATGATTTAGAAGCTAATACAGAAATGATTTATCTGTGAATTCAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAAGATAATGCGAAGCTTATAGTTTATGATGATGTTAGATTAGATTATTTTACGTTTTACGTGAATTCTATCCCCCAACTTTTACTTACTTCAATTCAATTGGATGGAGTGGGCTTTAGGATTATTATTTCAAATCTTTTGTCATTAAATGTACAATTATTCACTTGGGTTTAGCACAACATTGCCATTGTATGAGATAATAATGGATTTGGTACGAAAAGAAAAAAGTTAT

mRNA sequence

ATGAAGCGAGCTTTATGGGGAGCTGTCTTCAACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAA

Coding sequence (CDS)

ATGAAGCGAGCTTTATGGGGAGCTGTCTTCAACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACCTTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAA

Homology

[Close]

BLAST of CSPI01G06990 vs. TrEMBL
Match: A0A0A0LT17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042590 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.6e-76
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+VYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of CSPI01G06990 vs. TrEMBL
Match: A0A103Y8I5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017205 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-12
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 47  NDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHED 106
           N  Y+E +  +N+++  ++DVS+ EL+ +IDKFY+G D +++P IFE+ILKRKL+GKHE+
Sbjct: 48  NSYYSE-DEIQNENTANEEDVSSAELRTQIDKFYKG-DIEAIPTIFESILKRKLAGKHEE 107

Query: 107 ADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +DDELM E RQ  P EV D    E +DSD      +D+  DSEE
Sbjct: 108 SDDELMNEFRQDQPSEVSD----EVFDSD------TDSDSDSEE 139

[Close]

BLAST of CSPI01G06990 vs. TrEMBL
Match: A0A0D2LVI9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G067600 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.9e-12
Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 1


Query: 32  LSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAI 91
           L+  + S +R YS+  D               +DDVS +ELKR+I KF +G D D++P+I
Sbjct: 21  LAALTRSQIRFYSTNGDD--------------NDDVSNKELKRRIQKFLDG-DEDAIPSI 80

Query: 92  FEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSD 144
           FE ILKRKLSGKHE++DDELMKEIR +    ++D   + E+DSDL D   +D
Sbjct: 81  FEGILKRKLSGKHEESDDELMKEIRGEWKQPLDD-ADDLEFDSDLTDSSGTD 116

[Close]

BLAST of CSPI01G06990 vs. TrEMBL
Match: A0A067E3L9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036582mg PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.9e-11
Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 1


Query: 41  RRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKL 100
           R Y+S +D     N+  N  S+  +DVS++ELK +I+K+ EG D D++P+IFEAIL RKL
Sbjct: 2   RFYASESDSSKLPNTQNNSGSIGVEDVSSQELKSRIEKYLEG-DEDAVPSIFEAILSRKL 61

Query: 101 SGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDS 135
           SGKH+ +DDELM+E++ +      D   E+E+DS
Sbjct: 62  SGKHDQSDDELMEELQIRTKTSDRDANEEDEFDS 94

[Close]

BLAST of CSPI01G06990 vs. TrEMBL
Match: A0A0K9Q7A5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212600 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-10
Identity = 49/106 (46.23%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 49  KYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDAD 108
           K +++ +T + D+  DDD++TEELKR+I ++ + GD + LP+IFEAIL RKLSGKH+DAD
Sbjct: 48  KSSDVQTTNHPDA--DDDITTEELKRRIIRYMKEGDTEVLPSIFEAILVRKLSGKHDDAD 107

Query: 109 DELMKEIRQQLPGEVED-FKGEEEY-DSDLMDDDSSDASDDSEEED 153
           +ELM+E R +   + +D F+ +E+  +SD    +S +   DS EED
Sbjct: 108 NELMEEFRSKTQQDEDDRFQSDEDLTESDKDVTESDEELTDSSEED 151

[Close]

BLAST of CSPI01G06990 vs. TAIR10
Match: AT1G73770.1 (AT1G73770.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 55  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKE 114
           S  ++    ++ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  
Sbjct: 52  SDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDV 111

Query: 115 IRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEED 153
           +R+     V D    ++ DSD+  D   D+SD   E D
Sbjct: 112 VRKY---PVNDAHKVDDIDSDIESDGHGDSSDSDIESD 146

[Close]

BLAST of CSPI01G06990 vs. TAIR10
Match: AT4G21460.1 (AT4G21460.1 Ribosomal protein S24/S35, mitochondrial)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 42/123 (34.15%), Postives = 72/123 (58.54%), Query Frame = 1


Query: 30  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFY 89
           P L+P +     ++   + +  E ++T          +K  LV +DVS +ELK +IDK +
Sbjct: 27  PFLTPIAAPAPPKFRFFSSESGENSTTATESSPTDSSDKKDLVVEDVSNKELKSRIDKSF 86

Query: 90  EGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDD 144
             G+ D+LP + EA+L+R+L  KH + DDELM++I + LP   +D   +E+++SD  +  
Sbjct: 87  NEGNEDALPGVIEALLQRRLVDKHAETDDELMEKI-ESLP--FKDDVKDEDFESDFEEAH 146

[Close]

BLAST of CSPI01G06990 vs. TAIR10
Match: AT3G18240.1 (AT3G18240.1 Ribosomal protein S24/S35, mitochondrial)

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 40/123 (32.52%), Postives = 72/123 (58.54%), Query Frame = 1


Query: 30  PLLSPFSVSTLRRYSSGNDKYNELNSTK---------NKDSLVDDDVSTEELKRKIDKFY 89
           P L+P +     ++   + +  E ++T           K  LV +DVS +ELK +I+K++
Sbjct: 31  PFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEKKDLVVEDVSNKELKSRIEKYF 90

Query: 90  EGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDD 144
             G+ D+LP + EA+L+R+L  KH + DDEL+++I + LP   +D   +E+++SD  +  
Sbjct: 91  NEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI-ESLP--FKDDVKDEDFESDFEEAH 150

[Close]

BLAST of CSPI01G06990 vs. NCBI nr
Match: gi|449439425|ref|XP_004137486.1| (PREDICTED: histone chaperone RTT106 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 3.7e-76
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+VYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of CSPI01G06990 vs. NCBI nr
Match: gi|659066786|ref|XP_008461340.1| (PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 4.7e-63
Identity = 136/155 (87.74%), Postives = 142/155 (91.61%), Query Frame = 1


Query: 1   MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFNV S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GE+EDFKG EEYDS+L D    DA+ DSEEED+RI
Sbjct: 121 GEIEDFKG-EEYDSELTD----DAASDSEEEDKRI 150

[Close]

BLAST of CSPI01G06990 vs. NCBI nr
Match: gi|645269937|ref|XP_008240227.1| (PREDICTED: uncharacterized protein LOC103338759 [Prunus mume])

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 1


Query: 1   MKRALWGAVFNVYSGTLSVSPPLRTFRSRPLLSPFSVST---LRRYSSGNDKYNELNSTK 60
           MKR L   +  +Y+ T  +SPP      R  L+P + ST   LR YS+ +  +N+     
Sbjct: 1   MKRLLLRNL-RLYARTRLLSPPCYNPGPRSQLAPLAASTRPRLRFYSTESPSHNQ----- 60

Query: 61  NKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEI-- 120
                 +DDVS EELK +IDK++ G D +++P+IFEAILKRKL+GKHE+ D++LM+EI  
Sbjct: 61  ------EDDVSNEELKMQIDKYFRG-DEEAIPSIFEAILKRKLTGKHEEDDEKLMEEIPG 120

Query: 121 -RQQLPGEVEDFKGEEEYDSDLMDDDSSD 144
            RQ+ P  + D   E+E  SD  +   SD
Sbjct: 121 KRQEEP--LSDIDDEQETKSDFDEGSESD 134

[Close]

BLAST of CSPI01G06990 vs. NCBI nr
Match: gi|568847911|ref|XP_006477773.1| (PREDICTED: uncharacterized protein LOC102630659 [Citrus sinensis])

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12
Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 1


Query: 35  FSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEA 94
           FS    R Y+S +D  N  N+  N  S+  +DVS++ELK +I+K+ EG D D++P+IFEA
Sbjct: 32  FSQPRFRFYASESDSSNLPNTQNNSGSIGVEDVSSQELKSRIEKYLEG-DEDAVPSIFEA 91

Query: 95  ILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDS 135
           IL RKLSGKH+ +DDELM+E++ +      D   E+E+DS
Sbjct: 92  ILSRKLSGKHDQSDDELMEELQIRTKTSDRDANEEDEFDS 130

[Close]

BLAST of CSPI01G06990 vs. NCBI nr
Match: gi|976919599|gb|KVI04479.1| (hypothetical protein Ccrd_017205 [Cynara cardunculus var. scolymus])

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-12
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 47  NDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHED 106
           N  Y+E +  +N+++  ++DVS+ EL+ +IDKFY+G D +++P IFE+ILKRKL+GKHE+
Sbjct: 48  NSYYSE-DEIQNENTANEEDVSSAELRTQIDKFYKG-DIEAIPTIFESILKRKLAGKHEE 107

Query: 107 ADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +DDELM E RQ  P EV D    E +DSD      +D+  DSEE
Sbjct: 108 SDDELMNEFRQDQPSEVSD----EVFDSD------TDSDSDSEE 139

The following BLAST results are available for this feature:

BLAST of CSPI01G06990 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G06990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT17_CUCSA	2.6e-76	99.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042590 PE=4 SV=1	[more]
A0A103Y8I5_CYNCS	2.0e-12	49.04	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017205 PE=4 ...	[more]
A0A0D2LVI9_GOSRA	5.9e-12	46.43	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G067600 PE=4 SV=1	[more]
A0A067E3L9_CITSI	2.9e-11	46.81	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g036582mg PE=4 S...	[more]
A0A0K9Q7A5_SPIOL	1.4e-10	46.23	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212600 PE=4 SV=1	[more]

BLAST of CSPI01G06990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73770.1	6.4e-10	38.78	FUNCTIONS IN: molecular_function unknown	[more]
AT4G21460.1	1.4e-09	34.15	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.1	2.4e-09	32.52	Ribosomal protein S24/S35, mitochondrial	[more]

BLAST of CSPI01G06990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439425\|ref\|XP_004137486.1\|	3.7e-76	99.35	PREDICTED: histone chaperone RTT106 [Cucumis sativus]	[more]
gi\|659066786\|ref\|XP_008461340.1\|	4.7e-63	87.74	PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]	[more]
gi\|645269937\|ref\|XP_008240227.1\|	1.3e-12	41.61	PREDICTED: uncharacterized protein LOC103338759 [Prunus mume]	[more]
gi\|568847911\|ref\|XP_006477773.1\|	1.7e-12	47.00	PREDICTED: uncharacterized protein LOC102630659 [Citrus sinensis]	[more]
gi\|976919599\|gb\|KVI04479.1\|	2.9e-12	49.04	hypothetical protein Ccrd_017205 [Cynara cardunculus var. scolymus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G06990.1	CSPI01G06990.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G06990	Cla018477	Watermelon (97103) v1	cpiwmB066
CSPI01G06990	Cla018955	Watermelon (97103) v1	cpiwmB101
CSPI01G06990	Csa1G024260	Cucumber (Chinese Long) v2	cpicuB003
CSPI01G06990	Csa1G042590	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G06990	MELO3C017325	Melon (DHL92) v3.5.1	cpimeB058
CSPI01G06990	MELO3C002109	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G06990	ClCG04G010900	Watermelon (Charleston Gray)	cpiwcgB059
CSPI01G06990	ClCG06G014600	Watermelon (Charleston Gray)	cpiwcgB085
CSPI01G06990	Lsi06G013140	Bottle gourd (USVL1VR-Ls)	cpilsiB072
CSPI01G06990	Lsi02G002110	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G06990	MELO3C017325.2	Melon (DHL92) v3.6.1	cpimedB052
CSPI01G06990	MELO3C002109.2	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G06990	CsaV3_1G006930	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G06990	CsaV3_1G004020	Cucumber (Chinese Long) v3	cpicucB002
CSPI01G06990	Cla97C04G077710	Watermelon (97103) v2	cpiwmbB055
CSPI01G06990	Cla97C06G124120	Watermelon (97103) v2	cpiwmbB081
CSPI01G06990	Bhi08G001051	Wax gourd	cpiwgoB028
CSPI01G06990	Cucsa.121720	Cucumber (Gy14) v1	cgycpiB160
CSPI01G06990	Cucsa.111230	Cucumber (Gy14) v1	cgycpiB139
CSPI01G06990	CmaCh13G010080	Cucurbita maxima (Rimu)	cmacpiB218
CSPI01G06990	CmaCh10G003090	Cucurbita maxima (Rimu)	cmacpiB057
CSPI01G06990	CmaCh11G002900	Cucurbita maxima (Rimu)	cmacpiB087
CSPI01G06990	CmoCh10G003320	Cucurbita moschata (Rifu)	cmocpiB049
CSPI01G06990	CmoCh13G010460	Cucurbita moschata (Rifu)	cmocpiB204
CSPI01G06990	Cp4.1LG20g01330	Cucurbita pepo (Zucchini)	cpecpiB505
CSPI01G06990	Cp4.1LG18g07070	Cucurbita pepo (Zucchini)	cpecpiB369
CSPI01G06990	CsGy1G003930	Cucumber (Gy14) v2	cgybcpiB003
CSPI01G06990	Carg04829	Silver-seed gourd	carcpiB0418

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI01G06990	CSPI01G04010	Wild cucumber (PI 183967)	cpicpiB001

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G06990	Cucurbita maxima (Rimu)	cmacpiB394
CSPI01G06990	Cucurbita pepo (Zucchini)	cpecpiB025
CSPI01G06990	Cucurbita moschata (Rifu)	cmocpiB080
CSPI01G06990	Cucurbita moschata (Rifu)	cmocpiB383
CSPI01G06990	Cucurbita pepo (Zucchini)	cpecpiB658
CSPI01G06990	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G06990	Silver-seed gourd	carcpiB0549
CSPI01G06990	Silver-seed gourd	carcpiB0629