Csa1G042590.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G042590.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein F25P22.19
Location	Chr1 : 4374153 .. 4375896 (-)
Sequence length	468

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATGGGTCTAAACCCTAAAACTGTAAAGAAACGCCATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGGTAAATTAGTATTCAATTTGAAAATCATTTCTCAAATTTGGGCACTGTGGACTATACTCTCCAGGAATTTCTAAGCATGAGTCATCGCCTTCTATCATATTTTATTGGTATAGCTCATAATTGTGGGATTTCAAGTTCAGAGATCTTTTTTTTTACTTTCAAATTGTGTCTTCATTTCATGAGATGGTTCTTCGTAATTTTACAGTTGGTCGGATAATTGCCATGTTTTTTTTTGCCTTACTTAAGATTATTGTACATTTTTTTGTCATTCTGTTGAAAACTGATATGAAGAGGTATATTTTTTCCAGTTTAATTGTTTGAGTTCTTGAGTTGATGTTAGTTTAGCACCATAGTTGACTATAAAATCTTGGATTTATATCCTCTTCTCACGTGTAGGTTGTTTAATTCTGGAAATTTTAGAATAGATGTGTTAAGAAGCGTTTGTTGAAGAAAGTACTTTTAATCAAGAGACTTCCGTTATAAGTAACCGGAAAAGTAGTGAAATGAAAGTTGATTTTGTTTGTTGGTTGTTGGTTCTGTATATTGGAAGTTCTTTTAATTAAATTAGAGATAGGTTTTGAATGAATATTTTGAGAAAGATGTGAGAATAATTAGAATTACAAAGCAATTAAGTGAGGAAAATAGAGATCAATGAGAGAAAGCAAAAGAGCTCAGAAAAATAGAAGGGAAATCTGGAAAAGAAAGTGAGTAGAAAGAGTTTAGTGCAAAGAGATATTAAGAAAAAGGTGTTCACAGAGAAATGTTAATGAAAGAGTTTGTATTTTGAGAAATGAAGGATAATGTATTTTAGTCAAAGATACTTGATAGAACATCTATGATCTACCATTCACTTGTTCAAAAAATACGACTGATCTTAGTGAAATTAACCATTTAAATAGTACTTCTGTTAAAAGATGTGTAAAGTTCTTGTTATTTCTGGATCAATTTTTGGTAGTATGATTAATTTTTGTTTTTGAGCTTCTTCATTTGGTGTTCCTTTTCTGGAATCTTAGACTTATGATTTAGAAGCTAATACAGAAATGATTTATCTGTGAATTCAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAAGATAATGCGAAGCTTATAGTTTATGATGATGTTAGATTATTTTACGTTTTAAGTGAATTCTATCCCCCAACTTTTACTTACTTCAATTCAATTGGATGGAGTGGGCTTTAGGATTATTATTTCAAATCTTTTGTCATATAAATGTACAATTATTCACTTGGGTTTAGCACAACATTG

mRNA sequence

ATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAA

Coding sequence (CDS)

ATGAAGCGAGCTTTATGGGGAGCTGTCTTCCACGTCTATTCTGGCACGCTTTCCGTTTCTCCTCCGCTACGAACATTTCGTTCCCGCCCCTTACTGTCTCCATTTTCCGTTTCCACTTTGCGACGTTACTCATCCGGGAATGACAAGTACAATGAACTGAACTCAACCAAAAACAAGGACTCTCTCGTCGACGATGATGTCAGCACCGAAGAGCTGAAGAGGAAAATTGATAAATTTTACGAGGGTGGTGATGCCGATTCGTTACCAGCAATTTTCGAAGCAATATTGAAAAGGAAGCTATCGGGTAAACACGAAGATGCTGATGATGAGCTGATGAAAGAAATTCGACAGCAATTGCCCGGAGAAGTTGAAGATTTTAAAGGTGAAGAAGAATATGATTCAGATTTAATGGACGATGATTCCAGTGATGCCAGTGATGATTCTGAGGAAGAAGATAGAAGAATATAA

Protein sequence

MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI*

Homology

[Close]

BLAST of Csa1G042590.1 vs. TrEMBL
Match: A0A0A0LT17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042590 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.2e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of Csa1G042590.1 vs. TrEMBL
Match: A0A103Y8I5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017205 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-16
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 47  NDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHED 106
           N  Y+E +  +N+++  ++DVS+ EL+ +IDKFY+G D +++P IFE+ILKRKL+GKHE+
Sbjct: 48  NSYYSE-DEIQNENTANEEDVSSAELRTQIDKFYKG-DIEAIPTIFESILKRKLAGKHEE 107

Query: 107 ADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +DDELM E RQ  P EV D    E +DSD      +D+  DSEE
Sbjct: 108 SDDELMNEFRQDQPSEVSD----EVFDSD------TDSDSDSEE 139

[Close]

BLAST of Csa1G042590.1 vs. TrEMBL
Match: A0A0K9Q7A5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212600 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-15
Identity = 49/106 (46.23%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 49  KYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDAD 108
           K +++ +T + D+  DDD++TEELKR+I ++ + GD + LP+IFEAIL RKLSGKH+DAD
Sbjct: 48  KSSDVQTTNHPDA--DDDITTEELKRRIIRYMKEGDTEVLPSIFEAILVRKLSGKHDDAD 107

Query: 109 DELMKEIRQQLPGEVED-FKGEEEY-DSDLMDDDSSDASDDSEEED 153
           +ELM+E R +   + +D F+ +E+  +SD    +S +   DS EED
Sbjct: 108 NELMEEFRSKTQQDEDDRFQSDEDLTESDKDVTESDEELTDSSEED 151

[Close]

BLAST of Csa1G042590.1 vs. TrEMBL
Match: A0A0D2LVI9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G067600 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-15
Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 1


Query: 32  LSPFSVSTLRRYSSGNDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAI 91
           L+  + S +R YS+  D               +DDVS +ELKR+I KF +G D D++P+I
Sbjct: 21  LAALTRSQIRFYSTNGDD--------------NDDVSNKELKRRIQKFLDG-DEDAIPSI 80

Query: 92  FEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSD 144
           FE ILKRKLSGKHE++DDELMKEIR +    ++D   + E+DSDL D   +D
Sbjct: 81  FEGILKRKLSGKHEESDDELMKEIRGEWKQPLDD-ADDLEFDSDLTDSSGTD 116

[Close]

BLAST of Csa1G042590.1 vs. TrEMBL
Match: A0A078I4R8_BRANA (BnaC02g22450D protein OS=Brassica napus GN=BnaC02g22450D PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.3e-14
Identity = 40/96 (41.67%), Postives = 66/96 (68.75%), Query Frame = 1


Query: 55  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKE 114
           S++++ S  D+ VS EELK++I  F E GD D+LP +FEA++ RKLSGKH+++DDE+M+E
Sbjct: 49  SSESRGSGSDEVVSKEELKKRIQSFLEDGDEDALPDLFEAMMTRKLSGKHDESDDEVMEE 108

Query: 115 IRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +R+    +  +   +     DL D DS D+ ++S++
Sbjct: 109 VRKYPINDAHNKVDDNVESDDLSDGDSPDSDEESDD 144

[Close]

BLAST of Csa1G042590.1 vs. TAIR10
Match: AT1G73770.1 (AT1G73770.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1


Query: 55  STKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKE 114
           S  ++    ++ +S EELK++I  F + G+ D++P +FEA++ RKLSGKH+D+DDE+M  
Sbjct: 52  SDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDV 111

Query: 115 IRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEEED 153
           +R+     V D    ++ DSD+  D   D+SD   E D
Sbjct: 112 VRKY---PVNDAHKVDDIDSDIESDGHGDSSDSDIESD 146

[Close]

BLAST of Csa1G042590.1 vs. TAIR10
Match: AT4G21460.1 (AT4G21460.1 Ribosomal protein S24/S35, mitochondrial)

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 42/123 (34.15%), Postives = 70/123 (56.91%), Query Frame = 1


Query: 30  PLLSPFSVSTLRRYSSGNDKYNELNST---------KNKDSLVDDDVSTEELKRKIDKFY 89
           P L+P +     ++   + +  E ++T          +K  LV +DVS +ELK +IDK +
Sbjct: 27  PFLTPIAAPAPPKFRFFSSESGENSTTATESSPTDSSDKKDLVVEDVSNKELKSRIDKSF 86

Query: 90  EGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDD 144
             G+ D+LP + EA+L+R+L  KH + DDELM++I + LP   +D   +E+++SD  +  
Sbjct: 87  NEGNEDALPGVIEALLQRRLVDKHAETDDELMEKI-ESLP--FKDDVKDEDFESDFEEAH 146

[Close]

BLAST of Csa1G042590.1 vs. TAIR10
Match: AT3G18240.1 (AT3G18240.1 Ribosomal protein S24/S35, mitochondrial)

HSP 1 Score: 70.9 bits (172), Expect = 8.1e-13
Identity = 40/123 (32.52%), Postives = 71/123 (57.72%), Query Frame = 1


Query: 30  PLLSPFSVSTLRRYSSGNDKYNELNSTK---------NKDSLVDDDVSTEELKRKIDKFY 89
           P L+P +     ++   + +  E ++T           K  LV +DVS +ELK +I+K++
Sbjct: 31  PFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEKKDLVVEDVSNKELKSRIEKYF 90

Query: 90  EGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDD 144
             G+ D+LP + EA+L+R+L  KH + DDEL+++I + LP   +D   +E+++SD  +  
Sbjct: 91  NEGNEDALPGVIEALLQRRLVDKHAETDDELLEKI-ESLP--FKDDVKDEDFESDFEEAH 150

[Close]

BLAST of Csa1G042590.1 vs. NCBI nr
Match: gi|449439425|ref|XP_004137486.1| (PREDICTED: histone chaperone RTT106 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI
Sbjct: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 155

[Close]

BLAST of Csa1G042590.1 vs. NCBI nr
Match: gi|659066786|ref|XP_008461340.1| (PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 2.7e-66
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVSTLRRYSSGNDKYNELNSTKNKD 60
           MKRALWGAVF+V S TLSVSPPLRTFRS PLLSPFSV TLR YSSGNDKYNELNSTKNKD
Sbjct: 1   MKRALWGAVFNVCSRTLSVSPPLRTFRSVPLLSPFSVFTLRCYSSGNDKYNELNSTKNKD 60

Query: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEIRQQLP 120
           SLVDDDVSTEELKRKIDKFYEGGDADSLP IFEAILKRKLSGKHEDADDELMKEIRQ++P
Sbjct: 61  SLVDDDVSTEELKRKIDKFYEGGDADSLPEIFEAILKRKLSGKHEDADDELMKEIRQRMP 120

Query: 121 GEVEDFKGEEEYDSDLMDDDSSDASDDSEEEDRRI 156
           GE+EDFKG EEYDS+L D    DA+ DSEEED+RI
Sbjct: 121 GEIEDFKG-EEYDSELTD----DAASDSEEEDKRI 150

[Close]

BLAST of Csa1G042590.1 vs. NCBI nr
Match: gi|976919599|gb|KVI04479.1| (hypothetical protein Ccrd_017205 [Cynara cardunculus var. scolymus])

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-16
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 47  NDKYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHED 106
           N  Y+E +  +N+++  ++DVS+ EL+ +IDKFY+G D +++P IFE+ILKRKL+GKHE+
Sbjct: 48  NSYYSE-DEIQNENTANEEDVSSAELRTQIDKFYKG-DIEAIPTIFESILKRKLAGKHEE 107

Query: 107 ADDELMKEIRQQLPGEVEDFKGEEEYDSDLMDDDSSDASDDSEE 151
           +DDELM E RQ  P EV D    E +DSD      +D+  DSEE
Sbjct: 108 SDDELMNEFRQDQPSEVSD----EVFDSD------TDSDSDSEE 139

[Close]

BLAST of Csa1G042590.1 vs. NCBI nr
Match: gi|645269937|ref|XP_008240227.1| (PREDICTED: uncharacterized protein LOC103338759 [Prunus mume])

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 1


Query: 1   MKRALWGAVFHVYSGTLSVSPPLRTFRSRPLLSPFSVST---LRRYSSGNDKYNELNSTK 60
           MKR L   +  +Y+ T  +SPP      R  L+P + ST   LR YS+ +  +N+     
Sbjct: 1   MKRLLLRNL-RLYARTRLLSPPCYNPGPRSQLAPLAASTRPRLRFYSTESPSHNQ----- 60

Query: 61  NKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDADDELMKEI-- 120
                 +DDVS EELK +IDK++ G D +++P+IFEAILKRKL+GKHE+ D++LM+EI  
Sbjct: 61  ------EDDVSNEELKMQIDKYFRG-DEEAIPSIFEAILKRKLTGKHEEDDEKLMEEIPG 120

Query: 121 -RQQLPGEVEDFKGEEEYDSDLMDDDSSD 144
            RQ+ P  + D   E+E  SD  +   SD
Sbjct: 121 KRQEEP--LSDIDDEQETKSDFDEGSESD 134

[Close]

BLAST of Csa1G042590.1 vs. NCBI nr
Match: gi|902076907|gb|KNA03077.1| (hypothetical protein SOVF_212600 [Spinacia oleracea])

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-15
Identity = 49/106 (46.23%), Postives = 75/106 (70.75%), Query Frame = 1


Query: 49  KYNELNSTKNKDSLVDDDVSTEELKRKIDKFYEGGDADSLPAIFEAILKRKLSGKHEDAD 108
           K +++ +T + D+  DDD++TEELKR+I ++ + GD + LP+IFEAIL RKLSGKH+DAD
Sbjct: 48  KSSDVQTTNHPDA--DDDITTEELKRRIIRYMKEGDTEVLPSIFEAILVRKLSGKHDDAD 107

Query: 109 DELMKEIRQQLPGEVED-FKGEEEY-DSDLMDDDSSDASDDSEEED 153
           +ELM+E R +   + +D F+ +E+  +SD    +S +   DS EED
Sbjct: 108 NELMEEFRSKTQQDEDDRFQSDEDLTESDKDVTESDEELTDSSEED 151

The following BLAST results are available for this feature:

BLAST of Csa1G042590.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT17_CUCSA	9.2e-82	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042590 PE=4 SV=1	[more]
A0A103Y8I5_CYNCS	3.0e-16	49.04	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017205 PE=4 ...	[more]
A0A0K9Q7A5_SPIOL	1.9e-15	46.23	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212600 PE=4 SV=1	[more]
A0A0D2LVI9_GOSRA	2.5e-15	46.43	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G067600 PE=4 SV=1	[more]
A0A078I4R8_BRANA	6.3e-14	41.67	BnaC02g22450D protein OS=Brassica napus GN=BnaC02g22450D PE=4 SV=1	[more]

BLAST of Csa1G042590.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73770.1	1.5e-14	38.78	FUNCTIONS IN: molecular_function unknown	[more]
AT4G21460.1	4.7e-13	34.15	Ribosomal protein S24/S35, mitochondrial	[more]
AT3G18240.1	8.1e-13	32.52	Ribosomal protein S24/S35, mitochondrial	[more]

BLAST of Csa1G042590.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439425\|ref\|XP_004137486.1\|	1.3e-81	100.00	PREDICTED: histone chaperone RTT106 [Cucumis sativus]	[more]
gi\|659066786\|ref\|XP_008461340.1\|	2.7e-66	87.10	PREDICTED: uncharacterized protein LOC103499929 [Cucumis melo]	[more]
gi\|976919599\|gb\|KVI04479.1\|	4.3e-16	49.04	hypothetical protein Ccrd_017205 [Cynara cardunculus var. scolymus]	[more]
gi\|645269937\|ref\|XP_008240227.1\|	1.3e-15	41.61	PREDICTED: uncharacterized protein LOC103338759 [Prunus mume]	[more]
gi\|902076907\|gb\|KNA03077.1\|	2.8e-15	46.23	hypothetical protein SOVF_212600 [Spinacia oleracea]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G042590	Csa1G042590	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G042590.1	Csa1G042590.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G042590.1.utr3p1	Csa1G042590.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G042590.1.cds2	Csa1G042590.1.cds2	CDS
Csa1G042590.1.cds1	Csa1G042590.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G042590.1.utr5p1	Csa1G042590.1.utr5p1	five_prime_UTR