Csa1G042150 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATAAGAAAATGCTTCAATGGAAAATAAGAGAGAAGATAACAATAATTTACTAAGGAGATTATTAATGCTTGTCACTCTCTTTCAATGTCTTTCCAAGTATAAAGTCAGCTTCTATGGCTTTCTTTAAAACAGAGCGTATCAAATTCCAAATTATCCATTAACAGATTAACCAAGCTTTTACGTTGTCTCTTCAATGGCGGACTCGCCAGAGCTTTGATCACAATATTCCACCATTCAAAAAATACTTTGGAGCGAAACGGAACACAGAATTATCATTACAGACCATCTAGAGGCCCACGAAAACAGAGCAGAGAGAAGAGAAGTTCATATTTCAGAGACAGCAAAATCCCAGTCAAATCACTACAGAGTTTCCTCCCATCTATTTCCACTGGGGTGTCTCAATTAATTGCATTTCATAATCCTCTCTCTCTCTCTCTCTCCTTATCTCTGTCAATACATCTATGGCGATATTCGATTTACAGAGATAGGCGGAAGAATCGCGAGTTTCTTGGTGAAAAGAGAGATGGATTTGAGAAAAATCGTGGTGATTGTTGAGGATGTTGAAGTAGCAAGAACAGCGTTGAAATGGGCGCTTAATAATCTAATGCGCTATGGCGATTTGATTACTCTTCTTCATGTATTTCCTTCTACAAGATCCAAAAGTAGTTCCAAAGTTCGTAATCGCCGATTGAATGGCTATCAATTGGCCCTAACTTTCAGAGACCTCTGTAACACTTTCCCTAATGTAAGTTTTCCCATTACAAATTTTTCTTGTTTCTTCATTCCTTTTGTTATACTGATGATTTGAGTAACGATAATCATTTTATAGGGTTATGTTACAGACAAAGGTAGAAATTGTTGTGACGGAAGGCGATCAAGAAGGTAGAAAGATCACGGCCATTGTTAGAGAAATTGGAGCTTCTGTGCTTGTAGTTGGACTCCATAGCCATAGCTTTCTATACAAGTAAGTTTTTTCAAAATTAATCAATTATTTCACCGTGTTGATGGATTATTGTTTTCATTAGAACTCTGGGAATCTTCATTAATTATTATGTAATTTATGATCCTGATCTGCCATTAATGAAGGGGGTCCTGTCCTGTCTGTTTACAACTTTTTGTACTGAATGGATCAGAGCCAGAGAGATTTTCTCTTCCCCATGTTTAGAAGTTAAGAACAGAGGATGGAAAAGAGAAACTTTCTGGGAAATTGCTCAAGAAATTGGTCAACTATGTTAGGTTAAGACAGTGTCTCAATGGGTTTAGAATTTTTTAATCTTTGTTTTCTTATGTGATTAACATGCATGATCATTGTCTAATTAGGATTTTGTGCTTTCTTTAATAGCAGAGGAGTGGTTATTGTTAATTAGATCTTTATATATATATATATATATACTCATTCCATGTGTATTGCTAAGAACAAATTTAATACCATCCTACTTACAACTATACTTAAATGTCAATTAAACCATCAACTTTTTGTGTTTTGGCTTTGATCTTTTCATCACAAAAATGCCTCTTACCTGACAATTTTATTACAAGCCAAAACCAAAAGTACCAAATTTCTTTTTTATGATAATTGGATAGGACCCATTTAATAACAGTCAGTGTCACTCTTTCTTATCATCCACCCAAAATATGTCATCTTTTGATATGACTTGGTGTGGTGGGAGAGAAGTTTCCTTTCCTTAACTTGGGATTTTGAATCATGGGTATGTCTATTGTGTGAGAATATGGTTCATAAAACTAATGTTAGGTGTTGTTTTAGCCTTAAAAGTTATATAAAATACCTCCTAAACTCCATCCATGTGTCCATCTTCTCTTTGCAGTTCATTTCAATAGGATGCCAAAAGAAATTAAGAATAGAAAATTAATACACAATAATGTAATGTATAAATGTGTAAGCAAAAAGAAAAAAATGGGTGCTAACATATAATGCACTCAATTATTTTTCTTGCATAAATTGAGTGGTTAACTATTAGGTGAAATTTTACCTAATAACACACCTTCTAGAAAAATAAATATTTATGTTATTTTTCCTAGGAGATGTGAATGTTATACTATATCTAATATTAGTTGATAAAGTAATGATCAAATTAATTAAATGGGATTTGTATTTGCAATGCATTCAAAATATGTCTAACCTTTAGTTGAGTTCAATTAGACAAAACTTTAAATATATAGAATATCTACTTGATACAAGATTAAAAGTTGAGAATATTTTAGGTTTAGGAAAAGGTAGGTTAAATCATTCAAAACTCAAATTGATTGATTCTCCTCTGTGGGCGTGAAATATAGAGAAAGACCTTACAACTAGGGAAAGAAATAACATTGTTACATTGCATGCTATATTACCATTAGCGATTTCATTTACGAGAGATTGTTTTCACTCTCCCTTCTTTGAATCAAAAAGAGAGAAATAATTAAAAATAACTAGCATTTTGTTTGTTAATAGGATGGCTATGGAGGAAGAAGATTTAACCAGAATTTTCAATTGCAAAGTGCTGGCAATCAAGCAAGCAACGAACACAGCGGAAGAATCACAAAAGACCAAGAGTGTGGAAGTTATAGCTGCAACTACGAACGGTTCAACCAATATGGAGTTCTCCCAGATCGAGATTGCTAAATTACAGTAAGCTAATTAAGCTAATCACTGAATTTAAATACCATTACTGGAAATATTTCTTATTCTTTATTTGAACTTGAACTTGATATTATTATATATACATATATATTGCAGAGCTCCTGAAGTTCCTATACAGAAAATTCCATACAGAATTTGCCCCGACCCTTATGCGATTATTTGGAGATCGAAGAAATCAACAAGAAGATGGACTTTGTGACAAACAACCACACCCAGACCTTCTTTATTTATCTCAACCTTCATTCATTCCACTAATGCTCCTTTATGTTCTATCTCTTTCCCACACTTCTTTTTAGACCTTGCCAATAATGGAGTTCTTTTTTGTCATTGTCAACAACAACGTATGCCTTGTACACCACACATCCAGTGTAGATGAAAAAAAGTGCACTACAATTGTAATCCATTTTATCTGATATATATATATAGGTTTTG ATGGATTTGAGAAAAATCGTGGTGATTGTTGAGGATGTTGAAGTAGCAAGAACAGCGTTGAAATGGGCGCTTAATAATCTAATGCGCTATGGCGATTTGATTACTCTTCTTCATGTATTTCCTTCTACAAGATCCAAAAGTAGTTCCAAAGTTCGTAATCGCCGATTGAATGGCTATCAATTGGCCCTAACTTTCAGAGACCTCTGTAACACTTTCCCTAATACAAAGGTAGAAATTGTTGTGACGGAAGGCGATCAAGAAGGTAGAAAGATCACGGCCATTGTTAGAGAAATTGGAGCTTCTGTGCTTGTAGTTGGACTCCATAGCCATAGCTTTCTATACAAGATGGCTATGGAGGAAGAAGATTTAACCAGAATTTTCAATTGCAAAGTGCTGGCAATCAAGCAAGCAACGAACACAGCGGAAGAATCACAAAAGACCAAGAGTGTGGAAGTTATAGCTGCAACTACGAACGGTTCAACCAATATGGAGTTCTCCCAGATCGAGATTGCTAAATTACAAGCTCCTGAAGTTCCTATACAGAAAATTCCATACAGAATTTGCCCCGACCCTTATGCGATTATTTGGAGATCGAAGAAATCAACAAGAAGATGGACTTTGTGA ATGGATTTGAGAAAAATCGTGGTGATTGTTGAGGATGTTGAAGTAGCAAGAACAGCGTTGAAATGGGCGCTTAATAATCTAATGCGCTATGGCGATTTGATTACTCTTCTTCATGTATTTCCTTCTACAAGATCCAAAAGTAGTTCCAAAGTTCGTAATCGCCGATTGAATGGCTATCAATTGGCCCTAACTTTCAGAGACCTCTGTAACACTTTCCCTAATACAAAGGTAGAAATTGTTGTGACGGAAGGCGATCAAGAAGGTAGAAAGATCACGGCCATTGTTAGAGAAATTGGAGCTTCTGTGCTTGTAGTTGGACTCCATAGCCATAGCTTTCTATACAAGATGGCTATGGAGGAAGAAGATTTAACCAGAATTTTCAATTGCAAAGTGCTGGCAATCAAGCAAGCAACGAACACAGCGGAAGAATCACAAAAGACCAAGAGTGTGGAAGTTATAGCTGCAACTACGAACGGTTCAACCAATATGGAGTTCTCCCAGATCGAGATTGCTAAATTACAAGCTCCTGAAGTTCCTATACAGAAAATTCCATACAGAATTTGCCCCGACCCTTATGCGATTATTTGGAGATCGAAGAAATCAACAAGAAGATGGACTTTGTGA MDLRKIVVIVEDVEVARTALKWALNNLMRYGDLITLLHVFPSTRSKSSSKVRNRRLNGYQLALTFRDLCNTFPNTKVEIVVTEGDQEGRKITAIVREIGASVLVVGLHSHSFLYKMAMEEEDLTRIFNCKVLAIKQATNTAEESQKTKSVEVIAATTNGSTNMEFSQIEIAKLQAPEVPIQKIPYRICPDPYAIIWRSKKSTRRWTL*
BLAST of Csa1G042150 vs. TrEMBL
Match: A0A0A0LQQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042150 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 9.6e-111 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1
BLAST of Csa1G042150 vs. TrEMBL
Match: A0A068TQE0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022592001 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.6e-65 Identity = 127/204 (62.25%), Postives = 160/204 (78.43%), Query Frame = 1
BLAST of Csa1G042150 vs. TrEMBL
Match: A0A061FUI3_THECC (Adenine nucleotide alpha hydrolases-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_012242 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63 Identity = 128/205 (62.44%), Postives = 158/205 (77.07%), Query Frame = 1
BLAST of Csa1G042150 vs. TrEMBL
Match: M5WBX5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011515mg PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.4e-63 Identity = 121/207 (58.45%), Postives = 159/207 (76.81%), Query Frame = 1
BLAST of Csa1G042150 vs. TrEMBL
Match: K4BMD3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 5.7e-63 Identity = 125/209 (59.81%), Postives = 159/209 (76.08%), Query Frame = 1
BLAST of Csa1G042150 vs. TAIR10
Match: AT1G48960.1 (AT1G48960.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 213.8 bits (543), Expect = 1.0e-55 Identity = 109/208 (52.40%), Postives = 146/208 (70.19%), Query Frame = 1
BLAST of Csa1G042150 vs. TAIR10
Match: AT1G69080.1 (AT1G69080.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 48.9 bits (115), Expect = 4.4e-06 Identity = 37/129 (28.68%), Postives = 57/129 (44.19%), Query Frame = 1
BLAST of Csa1G042150 vs. NCBI nr
Match: gi|449439683|ref|XP_004137615.1| (PREDICTED: uncharacterized protein LOC101206357 [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 1.4e-110 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1
BLAST of Csa1G042150 vs. NCBI nr
Match: gi|659066685|ref|XP_008456196.1| (PREDICTED: uncharacterized protein LOC103496179 [Cucumis melo]) HSP 1 Score: 387.5 bits (994), Expect = 1.5e-104 Identity = 197/208 (94.71%), Postives = 202/208 (97.12%), Query Frame = 1
BLAST of Csa1G042150 vs. NCBI nr
Match: gi|1009131850|ref|XP_015883065.1| (PREDICTED: uncharacterized protein LOC107418888 [Ziziphus jujuba]) HSP 1 Score: 271.6 bits (693), Expect = 1.2e-69 Identity = 135/204 (66.18%), Postives = 167/204 (81.86%), Query Frame = 1
BLAST of Csa1G042150 vs. NCBI nr
Match: gi|697115602|ref|XP_009611713.1| (PREDICTED: uncharacterized protein LOC104105165 [Nicotiana tomentosiformis]) HSP 1 Score: 263.1 bits (671), Expect = 4.2e-67 Identity = 132/208 (63.46%), Postives = 166/208 (79.81%), Query Frame = 1
BLAST of Csa1G042150 vs. NCBI nr
Match: gi|698488232|ref|XP_009790726.1| (PREDICTED: uncharacterized protein LOC104238138 [Nicotiana sylvestris]) HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66 Identity = 131/208 (62.98%), Postives = 165/208 (79.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |