CSPI01G06610 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTGAGAAAAATCGTAGTGATTGTTGAGGATGTTGAAGTAGCAAGAACAGCGTTGAAATGGGCGCTTAATAATCTAATGCGCTATGGCGATTTGATTACTCTTCTTCATGTATTTCCTTCTACAAGATCCAAAAGTAGTTCCAAAGTTCGTAATCGCCGATTGAATGGCTATCAATTGGCCCTAACTTTCAGAGACCTCTGTAACACTTTCCCTAATGTAAGTTTTCCCATTACAAATTTTTCTTGTTTCTTCATTCCTTTTGTTACACTGATGATTTGAGTAACGATAATCATTTTATAGGGTTATGTTACAGACAAAGGTAGAAATTGTTGTGACGGAAGGCGATCAAGAAGGTAGAAAGATCACGGCCATTGTTAGAGAAATTGGAGCTTCTGTGCTTGTAGTTGGACTCCATAGCCATAGCTTTCTATACAAGTAAGTTTTTTCAAAATTAATCAATTATTTCACCGTGTTGATGGATTATTGTTTTCATTAGAACTCTGGGAATCTTCATTAATTATTATGTAATTTATGATCCTGATCTGCCATTAATGAAGGGGGTCCTGTCCTGTCTGTTTACAACTTTTTGTACTGAATGGATCAGAGCCAGAGAGATTTTCTCTTCCCCATGTTTAGAAGTTAAGAACAGAGGATGGAAAAGAGAAACTTTCTGGGAAATTGCTCAAGCAATTGGTCAACTATGTTAGGTTAAGACAGTGCCTCAATGGGTTTAGAATTTTTTAATCTTTGTTTTCTTATGTGATTAACATGCATGATCATTGTCTAATTAGGATTTTGTGCTTTCTTTAATAGCAGAGGAGTGGTTATTGTTAATTAGATCTTTATATATATATATATATATACTCATTCCATGTGTATTGCTAAGAACAAATTTAATACCATCCTACTTACAAGTATACTTAAATGTCAATTAAACCATCAACTTTTTGTGTTTTGGGTTTGATCTTTTCATCACAAAAATGCCTCTTACCTGACAATTTTATTACAAGCCAAAACCAAAAGTACCAAATTTCTTTTTTATGATAATTGGATAGGACCCATTTAATAACAGTCAGTGTCACTCTTTCTTATCATCCACCCAAAATATGTCATCTTTTGATATGACTTGGTGTGGTGGGAGAGAAGTTTCCTTTCCTTAACTTGGGATTTTGAATCATGGGTATGTCTATTGTGTGAGAATATGGTTCATGAAACTAATGTTAGGTGTTGTTTTAGCCTTAAAAGTTATATAAAATACCTCCTAAACTCCATCCATGTGTCCATCTTCTCTTTGCAGTTCATTTCAATAGGATGTCAAAAGAAATTAAAAATAGAAAATTAATACACAATAATGTAATGTATAAATGTGTAAGCAAAAAGAAAAAAAATGGGTGCTAACACATAATGCACTCAATTATTTTTCTTGCATAAATTGAGTGGTTAACTATTAGGTGAAATTTTACCTAATAACACACCTTCTAGAAAAATAAATATTTATGTTATTTTTCCTAGGAGATGTGAATGTTATACTATATCTAATATTAGTTGATAAAGTATTGATCAAATTAATTAAATGGGATTTGTATTTGCAATGGATTCAAAATATGTCTAACCTTTAGTTGAGTTCAATTAGACAAAACTTTAAATATATAGAATATCTACTTGATACAAGATTAAAAGTTGAGAATATTTTAGGTTTAGGAAAAGGTAGGTTAAATCATTCAAAACTCAAATTGATTGATTCTCCTCTGTGGGCGTGAAATATAGAGAAAGACCTTACAACTAGGGAAAGAAATAACATTGTTACATTGCATGCTATATTACCATTAGCGATTTCATTTACGATAGATTTTTTTCTCTCTCCCTTCTTTGAATCAAAAAGAGAGAAATAATTAAAAATAACTAGCATTTTGTTTGTTAATAGGATGGCTATGGAGGAAGAAGATTTAACCAGAATTTTCAATTGCAAAGTGCTGGCAATCAAGCAAGCAACGAACACAGCGGAAGAATCACAAAAGACCAAGAGTGTGGAAGTTATAGCTGCAACTACGAACGGTTCAACCAATATGGAGTTCTCCCAGATCGAGATTGCTAAATTACAGTAAGCTAATTAAGCTAATCACTGAATTTAAATACCATTACTGGAAATATTTCTTATTCTTTATTTGAACTTGAACTTTATATTATTATATATACATATATATTGCAGAGCTCCTGAAGTTCCTATACAGAAAATTCCATACAGAATTTGCCCCGACCCTTATGCGATTATTTGGAGATCGAAGAAATCAACAAGAAGATGGACTTTGTGACAAACAACCACACCCAGACCTTCTTTATTTATCTCAACCTTCATTCATTCCACTAATGCTCCTTTATGTTCTATCTCTTTCCCACACTTCTTTTTAGACCTTGCCAATAATGGAGTTCTTTTTTGTCATTGTCAACAACAACGTATGCCTTGTACACCACACATCCAGTGTAGATGAAAAAAAGTGCACTACAATTGTAATCCATTT ATGGATTTGAGAAAAATCGTAGTGATTGTTGAGGATGTTGAAGTAGCAAGAACAGCGTTGAAATGGGCGCTTAATAATCTAATGCGCTATGGCGATTTGATTACTCTTCTTCATGTATTTCCTTCTACAAGATCCAAAAGTAGTTCCAAAGTTCGTAATCGCCGATTGAATGGCTATCAATTGGCCCTAACTTTCAGAGACCTCTGTAACACTTTCCCTAATACAAAGGTAGAAATTGTTGTGACGGAAGGCGATCAAGAAGGTAGAAAGATCACGGCCATTGTTAGAGAAATTGGAGCTTCTGTGCTTGTAGTTGGACTCCATAGCCATAGCTTTCTATACAAGATGGCTATGGAGGAAGAAGATTTAACCAGAATTTTCAATTGCAAAGTGCTGGCAATCAAGCAAGCAACGAACACAGCGGAAGAATCACAAAAGACCAAGAGTGTGGAAGTTATAGCTGCAACTACGAACGGTTCAACCAATATGGAGTTCTCCCAGATCGAGATTGCTAAATTACAAGCTCCTGAAGTTCCTATACAGAAAATTCCATACAGAATTTGCCCCGACCCTTATGCGATTATTTGGAGATCGAAGAAATCAACAAGAAGATGGACTTTGTGA ATGGATTTGAGAAAAATCGTAGTGATTGTTGAGGATGTTGAAGTAGCAAGAACAGCGTTGAAATGGGCGCTTAATAATCTAATGCGCTATGGCGATTTGATTACTCTTCTTCATGTATTTCCTTCTACAAGATCCAAAAGTAGTTCCAAAGTTCGTAATCGCCGATTGAATGGCTATCAATTGGCCCTAACTTTCAGAGACCTCTGTAACACTTTCCCTAATACAAAGGTAGAAATTGTTGTGACGGAAGGCGATCAAGAAGGTAGAAAGATCACGGCCATTGTTAGAGAAATTGGAGCTTCTGTGCTTGTAGTTGGACTCCATAGCCATAGCTTTCTATACAAGATGGCTATGGAGGAAGAAGATTTAACCAGAATTTTCAATTGCAAAGTGCTGGCAATCAAGCAAGCAACGAACACAGCGGAAGAATCACAAAAGACCAAGAGTGTGGAAGTTATAGCTGCAACTACGAACGGTTCAACCAATATGGAGTTCTCCCAGATCGAGATTGCTAAATTACAAGCTCCTGAAGTTCCTATACAGAAAATTCCATACAGAATTTGCCCCGACCCTTATGCGATTATTTGGAGATCGAAGAAATCAACAAGAAGATGGACTTTGTGA
BLAST of CSPI01G06610 vs. TrEMBL
Match: A0A0A0LQQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042150 PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 4.8e-110 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1
BLAST of CSPI01G06610 vs. TrEMBL
Match: A0A068TQE0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022592001 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 4.7e-65 Identity = 127/204 (62.25%), Postives = 160/204 (78.43%), Query Frame = 1
BLAST of CSPI01G06610 vs. TrEMBL
Match: A0A061FUI3_THECC (Adenine nucleotide alpha hydrolases-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_012242 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 5.7e-63 Identity = 128/205 (62.44%), Postives = 158/205 (77.07%), Query Frame = 1
BLAST of CSPI01G06610 vs. TrEMBL
Match: K4BMD3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.2e-62 Identity = 125/209 (59.81%), Postives = 159/209 (76.08%), Query Frame = 1
BLAST of CSPI01G06610 vs. TrEMBL
Match: M5WBX5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011515mg PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.2e-62 Identity = 121/207 (58.45%), Postives = 159/207 (76.81%), Query Frame = 1
BLAST of CSPI01G06610 vs. TAIR10
Match: AT1G48960.1 (AT1G48960.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 211.5 bits (537), Expect = 5.1e-55 Identity = 109/208 (52.40%), Postives = 148/208 (71.15%), Query Frame = 1
BLAST of CSPI01G06610 vs. TAIR10
Match: AT1G69080.1 (AT1G69080.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 48.9 bits (115), Expect = 4.4e-06 Identity = 37/129 (28.68%), Postives = 59/129 (45.74%), Query Frame = 1
BLAST of CSPI01G06610 vs. NCBI nr
Match: gi|449439683|ref|XP_004137615.1| (PREDICTED: uncharacterized protein LOC101206357 [Cucumis sativus]) HSP 1 Score: 405.2 bits (1040), Expect = 6.8e-110 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1
BLAST of CSPI01G06610 vs. NCBI nr
Match: gi|659066685|ref|XP_008456196.1| (PREDICTED: uncharacterized protein LOC103496179 [Cucumis melo]) HSP 1 Score: 385.2 bits (988), Expect = 7.3e-104 Identity = 197/208 (94.71%), Postives = 202/208 (97.12%), Query Frame = 1
BLAST of CSPI01G06610 vs. NCBI nr
Match: gi|1009131850|ref|XP_015883065.1| (PREDICTED: uncharacterized protein LOC107418888 [Ziziphus jujuba]) HSP 1 Score: 270.0 bits (689), Expect = 3.4e-69 Identity = 135/204 (66.18%), Postives = 167/204 (81.86%), Query Frame = 1
BLAST of CSPI01G06610 vs. NCBI nr
Match: gi|697115602|ref|XP_009611713.1| (PREDICTED: uncharacterized protein LOC104105165 [Nicotiana tomentosiformis]) HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66 Identity = 132/208 (63.46%), Postives = 166/208 (79.81%), Query Frame = 1
BLAST of CSPI01G06610 vs. NCBI nr
Match: gi|698488232|ref|XP_009790726.1| (PREDICTED: uncharacterized protein LOC104238138 [Nicotiana sylvestris]) HSP 1 Score: 260.0 bits (663), Expect = 3.5e-66 Identity = 131/208 (62.98%), Postives = 165/208 (79.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |