Carg04797 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGGGCTTCATAATATACGAATCGCTTGTTTCGTTTCTCAAATTTGAACTCATCAAAACGCGAAAAGAGCGATGGATTTGAGGAAAATCGTGGTGATTGTTGAGGATGTTGAAGCAGCTAGAACGGCATTGAAGTGGACGCTCAATAACCTAATGCGCTACGGCGATTTGATTACTCTTCTCCATGTATTTCCGACTACAAGATCCAAAAGCGCCTCCAAACTTCGTCATCTCCGATTGAACGGCTATCAATTAGCCCTATCATTCAAAGACCTCTGTACCACTTTCCCCAATGTAAGTTTTCCGATTCCAGATTTAATCGTCTCCTCGTTGTTTCCTGATCGCTTTTGTTATACTGATGATTTGGGTAACGATAACCATTTTATAGGGTTATGTTACAGACAAAGGTAGAGATTATTGTGACGGAAGGCGGCGGCGGCGACGAAGAAGGTAGAAAAATCGCGGCCGTTGTTAGAGAGATTGGAGCTTCTGTGCTTGTGGTTGGCCTCCATGATCGCAGCTTTCTGTACAAGTAAGTTTTCAGAATTAATCCATTATTACACTGTCTAATTAAGCATTAAATTCACCGTGTTCTTGGGACTTAGGGAATCTTCATTAATTATGATCCTGATCGGCCATTAATGGCACGGGTCCCGTCCTGTCTGTTTGCTATTTCTTGTACTGAATGGATGATGAAACCAGAGGGAGCTTCTGTTGTTGATGTTGTAAAAGTTGAATCAAAACAAAGGATTGAGTAGTCAAAGTTTCTGGGGAATTGCTGAAGAAATGGTCAATTATGTTAGGTAAAGAGAGTAGCTGGGTGGGTTTAGATTTTTGATCTCTGTGTTTATTACTTGTTGGGATGATTTTGTGGTTTCATTAATGGCGGAGGAGTGGATTTTTCCATTTATTGAAGAGAAGACTTAATTATCACAACTTTTGGTGGCTTCTTTTGGTTTGGTATTCATCACAAAAACGGCTCCTACCTGACAAATTTTATTATGAGCCCCAAAAACCAAAAAAGTGCCAATACTTTTTTGAACTAATGGATGGGACCCATTTAATCAAACTCACCCTTCATTTGCATCCACAAAAAAAACATGTTAGCCATGAGCATACACTCTTGGAAATCGGGTTTATTTTGGCCACATAGCTAGTAGATATTATCGGTTTAAACAGAGTCAATTGGGAGAGTTTTCTATATCTTTGCTTTGTTCTCCTCCTGGTACTTAGCACCAGGTACTTAGCTCTAATTCCATTTGTAACAGTTTAAACCCACCACCGCTTGCAGATATTGTCTGCTTTGGCCATCTTTGCTTTGTTACGTCAGCCTCATAGTTTTAGAACACGTCTAATAGGGAGACGTTTCCACATTCTTGTAATGTATGTTTTGTCTAACAGGGAGACGTTTCCACACTCTTGTAAGGAATGTTTATGTTTTGGGATCTTACAATGTCATCTCAATAGGGAGACGTTTCTACACTCTTGTAAAGAATGTTTTATTTTCATCGAGATGACCTATTAAACGCATTGGCGTGGATGAGATTGTTTGTTTCCTTTTCTCTTCATATTAATAGGCATTGGTTTGTTGACATAGGATGGCTGTGGAGGAAGATGATATAGCAAGGAACTTCAAGTGTAAAGTTCTGGCAATCAAGAGCTCAACAGAAGAACCACAGAAAACCAAAAACGTGGAGGTTATAGCAGCAGCAGCAGCAGCAGCAGTGGACACGGGCAGTTCAACAAACATGGACTTTTCCCAGATCGAGATTGCCAAATTACAGTAAGAGCTAACACAAAGTCAATTGAATTAAACACCATATATATTCTTGATTCATCTGAAATTTAAAACAAATTTTGCAGAGCTCCTGAAATTCCTCCGCAGAAAATTCCATACAGAATCTGCCCCGACCCTTCTGCCATTATTTGGAGATCCAAGAAATCAAGAACAAGGTGGACCTTGTGACATCGGCCCTCTCTCTTTATTTATCTTCTCTCTCGCTTTACACACCTTCTTAGACATCCCCAATAATGGAGTTTTTTT TAGGGCTTCATAATATACGAATCGCTTGTTTCGTTTCTCAAATTTGAACTCATCAAAACGCGAAAAGAGCGATGGATTTGAGGAAAATCGTGGTGATTGTTGAGGATGTTGAAGCAGCTAGAACGGCATTGAAGTGGACGCTCAATAACCTAATGCGCTACGGCGATTTGATTACTCTTCTCCATGTATTTCCGACTACAAGATCCAAAAGCGCCTCCAAACTTCGTCATCTCCGATTGAACGGCTATCAATTAGCCCTATCATTCAAAGACCTCTGTACCACTTTCCCCAATACAAAGGTAGAGATTATTGTGACGGAAGGCGGCGGCGGCGACGAAGAAGGTAGAAAAATCGCGGCCGTTGTTAGAGAGATTGGAGCTTCTGTGCTTGTGGTTGGCCTCCATGATCGCAGCTTTCTGTACAAGATGGCTGTGGAGGAAGATGATATAGCAAGGAACTTCAAGTGTAAAGTTCTGGCAATCAAGAGCTCAACAGAAGAACCACAGAAAACCAAAAACGTGGAGGTTATAGCAGCAGCAGCAGCAGCAGCAGTGGACACGGGCAGTTCAACAAACATGGACTTTTCCCAGATCGAGATTGCCAAATTACAAGCTCCTGAAATTCCTCCGCAGAAAATTCCATACAGAATCTGCCCCGACCCTTCTGCCATTATTTGGAGATCCAAGAAATCAAGAACAAGGTGGACCTTGTGACATCGGCCCTCTCTCTTTATTTATCTTCTCTCTCGCTTTACACACCTTCTTAGACATCCCCAATAATGGAGTTTTTTT ATGGATTTGAGGAAAATCGTGGTGATTGTTGAGGATGTTGAAGCAGCTAGAACGGCATTGAAGTGGACGCTCAATAACCTAATGCGCTACGGCGATTTGATTACTCTTCTCCATGTATTTCCGACTACAAGATCCAAAAGCGCCTCCAAACTTCGTCATCTCCGATTGAACGGCTATCAATTAGCCCTATCATTCAAAGACCTCTGTACCACTTTCCCCAATACAAAGGTAGAGATTATTGTGACGGAAGGCGGCGGCGGCGACGAAGAAGGTAGAAAAATCGCGGCCGTTGTTAGAGAGATTGGAGCTTCTGTGCTTGTGGTTGGCCTCCATGATCGCAGCTTTCTGTACAAGATGGCTGTGGAGGAAGATGATATAGCAAGGAACTTCAAGTGTAAAGTTCTGGCAATCAAGAGCTCAACAGAAGAACCACAGAAAACCAAAAACGTGGAGGTTATAGCAGCAGCAGCAGCAGCAGCAGTGGACACGGGCAGTTCAACAAACATGGACTTTTCCCAGATCGAGATTGCCAAATTACAAGCTCCTGAAATTCCTCCGCAGAAAATTCCATACAGAATCTGCCCCGACCCTTCTGCCATTATTTGGAGATCCAAGAAATCAAGAACAAGGTGGACCTTGTGA MDLRKIVVIVEDVEAARTALKWTLNNLMRYGDLITLLHVFPTTRSKSASKLRHLRLNGYQLALSFKDLCTTFPNTKVEIIVTEGGGGDEEGRKIAAVVREIGASVLVVGLHDRSFLYKMAVEEDDIARNFKCKVLAIKSSTEEPQKTKNVEVIAAAAAAAVDTGSSTNMDFSQIEIAKLQAPEIPPQKIPYRICPDPSAIIWRSKKSRTRWTL
BLAST of Carg04797 vs. NCBI nr
Match: XP_023519721.1 (uncharacterized protein LOC111783074 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 395.2 bits (1014), Expect = 1.4e-106 Identity = 203/213 (95.31%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Carg04797 vs. NCBI nr
Match: XP_022923726.1 (uncharacterized protein LOC111431346 [Cucurbita moschata]) HSP 1 Score: 394.0 bits (1011), Expect = 3.1e-106 Identity = 205/213 (96.24%), Postives = 205/213 (96.24%), Query Frame = 0
BLAST of Carg04797 vs. NCBI nr
Match: XP_023000727.1 (uncharacterized protein LOC111495088 [Cucurbita maxima] >XP_023000728.1 uncharacterized protein LOC111495088 [Cucurbita maxima]) HSP 1 Score: 380.9 bits (977), Expect = 2.7e-102 Identity = 200/215 (93.02%), Postives = 201/215 (93.49%), Query Frame = 0
BLAST of Carg04797 vs. NCBI nr
Match: XP_004137615.1 (PREDICTED: uncharacterized protein LOC101206357 [Cucumis sativus] >KGN64103.1 hypothetical protein Csa_1G042150 [Cucumis sativus]) HSP 1 Score: 320.1 bits (819), Expect = 5.7e-84 Identity = 167/216 (77.31%), Postives = 183/216 (84.72%), Query Frame = 0
BLAST of Carg04797 vs. NCBI nr
Match: XP_008456196.1 (PREDICTED: uncharacterized protein LOC103496179 [Cucumis melo]) HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82 Identity = 166/217 (76.50%), Postives = 181/217 (83.41%), Query Frame = 0
BLAST of Carg04797 vs. TAIR10
Match: AT1G48960.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 199.5 bits (506), Expect = 2.1e-51 Identity = 110/212 (51.89%), Postives = 143/212 (67.45%), Query Frame = 0
BLAST of Carg04797 vs. TAIR10
Match: AT3G62550.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 48.5 bits (114), Expect = 5.9e-06 Identity = 40/155 (25.81%), Postives = 71/155 (45.81%), Query Frame = 0
BLAST of Carg04797 vs. TAIR10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 45.4 bits (106), Expect = 5.0e-05 Identity = 35/118 (29.66%), Postives = 54/118 (45.76%), Query Frame = 0
BLAST of Carg04797 vs. TAIR10
Match: AT1G44760.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 45.4 bits (106), Expect = 5.0e-05 Identity = 34/110 (30.91%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Carg04797 vs. TAIR10
Match: AT5G57035.1 (U-box domain-containing protein kinase family protein) HSP 1 Score: 41.6 bits (96), Expect = 7.2e-04 Identity = 34/126 (26.98%), Postives = 56/126 (44.44%), Query Frame = 0
BLAST of Carg04797 vs. TrEMBL
Match: tr|A0A0A0LQQ9|A0A0A0LQQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042150 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 3.8e-84 Identity = 167/216 (77.31%), Postives = 183/216 (84.72%), Query Frame = 0
BLAST of Carg04797 vs. TrEMBL
Match: tr|A0A1S3C3C8|A0A1S3C3C8_CUCME (uncharacterized protein LOC103496179 OS=Cucumis melo OX=3656 GN=LOC103496179 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 7.2e-83 Identity = 166/217 (76.50%), Postives = 181/217 (83.41%), Query Frame = 0
BLAST of Carg04797 vs. TrEMBL
Match: tr|A0A2P4INZ3|A0A2P4INZ3_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_36507 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 3.5e-69 Identity = 139/212 (65.57%), Postives = 166/212 (78.30%), Query Frame = 0
BLAST of Carg04797 vs. TrEMBL
Match: tr|A0A1U8FVF6|A0A1U8FVF6_CAPAN (uncharacterized protein LOC107862156 OS=Capsicum annuum OX=4072 GN=LOC107862156 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 2.1e-66 Identity = 134/210 (63.81%), Postives = 157/210 (74.76%), Query Frame = 0
BLAST of Carg04797 vs. TrEMBL
Match: tr|A0A2P5ELT6|A0A2P5ELT6_9ROSA (Universal stress protein OS=Trema orientalis OX=63057 GN=TorRG33x02_177270 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 4.7e-66 Identity = 137/212 (64.62%), Postives = 165/212 (77.83%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |