Csa1G025010 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G025010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRas-related protein Rab-25; contains IPR001806 (Small GTPase superfamily), IPR002041 (Ran GTPase), IPR005225 (Small GTP-binding protein domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr1 : 2653366 .. 2656281 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTTTAAAGGTTTAAGAAAGGCTCTCTGTTTTGGCAGAGCAGAGAAACAGAGAAATGGCGGATTCGTTGGACGAAGACTGTGATTATCTCTTCAAGGCGGTTCTTACGGGCGATTCCGGCGTTGGAAAATCCAATCTCCTCTCTCGTTTCTCCAAAAATGAATTCCGATTCGACTCTAGACCTACGATCGGTGTCGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAACTCGTCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGGTCAATCTTCTTCTCCCTTAATCTTTTTCTTCAAATAATTAGTTTCGAGAATTTCTTTCATTCGGTCTCCCTGTTTCGATTAAGTTCTAAGTGTTGTTCCACGAATAAATTATTTAGGTTGAATATGAAGTATTGATTAATTTTCAGCCATATGTTCAATGTTCAAATTTTCTAATATATTTTAATTTAAAATAATTTATTTGTTTTAAGAAATAACATAATTATTTACCAAATAAATCATTATTTGTTTCTTAGTTTGACAATCTCTAAGATAAGAGATTGAATTTTTTATATCAATTAGGAAGAAGCTAAACTCACATGAATTATCTTCCTACTCAAGTTAACTTGACAAATACGAGCATTTATCATTTCTTTTAGTTTTTTTCTTTCCTATATTAAATTATGAGGATGTTTTCTTAAAATAAAGAAGTGATCTCTCCATTGGAAAAAAAAAAAAAAAATCTCTTTATATATCATCTTATAGTTCAACAATTCAACCTAGAAAGCTTAAGAACATAAATATTCTTCTAGGGTTTCTAGTCCAACAATGATTAAACCTATTAGGTAAACTTTTGGGATTTAGAAGAGAGGAAACTTTAATCTTTTTTTAGGGACCCATAGACCTAAAAGGAGAATTTAGACTTGTCCTTTTGTGATTGATTGAAGGCTAATACGTTCGTTTTTCTTTTGATAACATGTGAATAAAAGAATCAAATTTCTTATAAGTTGAACTAGGTTTATTTTGATTAATATTAATTCTTTTTTAAAATGAAAGTTGGAGCTATAATCTCTCTTTTCATACCAAATATTATTCTTTTGAGTCATGAGCCACTGTCCAACATTAAATATGATAGTTTTAATGACGGTCTTTAAAAGTCATTATTTAAGGACAAAAAAAACTTTTCGTAAATTTGAACCCATTCTTTTAGGTTTGTTTGATTTAGAATCATTTTATATTAAGTTAAAGAGTTTGTCCCAATTAGTGTTGGAATGTTTTCTTTTTTCTACATTTTTCTTAATAATTTGTTTAATCATTTTAAATTTTTACTAATTTCAGCTACAAAAGATATAAACATTTTTTTAATAACTATGTTATAAACTTTTTAGTTGTTCCACCAAATTTACTTCTGTTTTCATTGGACCAATCATTGTATGTGTGTGTATATATATATATATTATGATAAATTTTGTATTTCTTCAAAATAAAAAAGTAGGCCTTTTCTTTTGTTAATTCATGTAGATCAATAGTGATGATATGATATTATACGTTTTAGTCAATTGATGACTTAAGATGATATTAGGTTGTTGAAAACAAATTAAGGTTAGAATTCTTTTATTATTATTAAAAAAATTAACGGTAATTTTTTTAGTACAATTTAGAGTTGAAAGAATTTGAACTTAAAATCTCTTAGTCACGTATTGAATCTTTGATAGTAAGAACAATTAATTGTGCAGCTTTTCTAATGACAACTTTTAAAATTATTTACAATCTATAGTCAAGAATAATAGTTTATCATGACCTATTATAGATACACTGTATAAACGTATATATATATATTATTATTATTATTCCAATGAGGATTTGACACGTGAAAGGTTGTACGGTAAAGGGCATCCCCAAACAAAGGGCTTTAAGGCGACACCTTTATTTAAATCTTTCATACTTTTAAAGAAATTTTTAATTCACTCATTTGTTGTTGTTTTCTTTTTCTTTCTCTCCAAATTTTTTTCTTTTTTCTTTTTTATTGACAATCAATTTTACAGTAAAAAATTGAAAAATTCCCCATTTTATATGTTACTTGAGAAAAGAATTTATTAGTATTAATTTTATAAATTTTGACATTAACCATATGAATGAAAATTGAATAAGAGAAAGCGATATTTTGATTCATTAAAAGATAATTTAAAGAATGTTTAAAATAAGAAGTATGGTGTAAAGTTGCTTAAACCGTAGTTATTGAAGTATGTGTTTAAGGTATTATCGTTATTTAATCTAGAGTTATGAAATGTATGTTTACGAACATTTATGTTAATGAAAAATTGGTACTTTGATTAATCCTATAGTTTATATTTATTCCTTGGGGTTTGAGTTTCTTTTGTTTTTCCTTTCCAAAATATATAGTTTATTTGTTTGTTGCCTAACATCTAAATCTTAAATGTTGATATTGTAATCTTAATTTGAATGTAATAACACTACATACAGATTTAGGGCAATTACAAGTTCTTATTATCGGGGAGCATTAGGAGCATTACTTGTTTACGACATAACTCGCGTGGCTACATTTGATAACATAAAGAAGTGGCTACGAGAGTTGAGAGAGTTTGGAAATCCGGAAATGGTGATCATTCTAGTTGGAAACAAATGCGACTTACATCAATCGCGAGAAGTACAAGAAGAAGAAGCGCGACATTTGGCCGAGTTGGAGAACTTGTTTTTCATGGAAACTTCTGCCAAAGATAATTTGAATGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCACGCCATCGCCTCTCAAAAGACATTGGATTTGCATAAAAAATTTGAAAAGCTTGTTGCTTTTCCAAACGGAAAAGAGATTATTAGTATTCATGAAGTAACCCCAACCAAACACAATTCAAATTGTTGCTCTTTGTGA

mRNA sequence

ATGGCGGATTCGTTGGACGAAGACTGTGATTATCTCTTCAAGGCGGTTCTTACGGGCGATTCCGGCGTTGGAAAATCCAATCTCCTCTCTCGTTTCTCCAAAAATGAATTCCGATTCGACTCTAGACCTACGATCGGTGTCGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAACTCGTCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGGGGAGCATTAGGAGCATTACTTGTTTACGACATAACTCGCGTGGCTACATTTGATAACATAAAGAAGTGGCTACGAGAGTTGAGAGAGTTTGGAAATCCGGAAATGGTGATCATTCTAGTTGGAAACAAATGCGACTTACATCAATCGCGAGAAGTACAAGAAGAAGAAGCGCGACATTTGGCCGAGTTGGAGAACTTGTTTTTCATGGAAACTTCTGCCAAAGATAATTTGAATGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCACGCCATCGCCTCTCAAAAGACATTGGATTTGCATAAAAAATTTGAAAAGCTTGTTGCTTTTCCAAACGGAAAAGAGATTATTAGTATTCATGAAGTAACCCCAACCAAACACAATTCAAATTGTTGCTCTTTGTGA

Coding sequence (CDS)

ATGGCGGATTCGTTGGACGAAGACTGTGATTATCTCTTCAAGGCGGTTCTTACGGGCGATTCCGGCGTTGGAAAATCCAATCTCCTCTCTCGTTTCTCCAAAAATGAATTCCGATTCGACTCTAGACCTACGATCGGTGTCGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAACTCGTCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGGGGAGCATTAGGAGCATTACTTGTTTACGACATAACTCGCGTGGCTACATTTGATAACATAAAGAAGTGGCTACGAGAGTTGAGAGAGTTTGGAAATCCGGAAATGGTGATCATTCTAGTTGGAAACAAATGCGACTTACATCAATCGCGAGAAGTACAAGAAGAAGAAGCGCGACATTTGGCCGAGTTGGAGAACTTGTTTTTCATGGAAACTTCTGCCAAAGATAATTTGAATGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCACGCCATCGCCTCTCAAAAGACATTGGATTTGCATAAAAAATTTGAAAAGCTTGTTGCTTTTCCAAACGGAAAAGAGATTATTAGTATTCATGAAGTAACCCCAACCAAACACAATTCAAATTGTTGCTCTTTGTGA

Protein sequence

MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL*
Homology
[Close]
BLAST of Csa1G025010 vs. Swiss-Prot
Match: RAA6A_ARATH (Ras-related protein RABA6a OS=Arabidopsis thaliana GN=RABA6A PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.3e-79
Identity = 149/228 (65.35%), Postives = 175/228 (76.75%), Query Frame = 1 

Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           D+ +E+CDYLFKAVL GDS VGKSNLLSRFSK+EFRFDS+PTIGVEFAYRN+ V DK++K
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TFDNIKKWL ELR+F NPE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+E+E + LAE E L+F+ETSA +N+NVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 DLHKKFEKL----------VAFPNGKEIISIHEVTPTK----HNSNCC 217
             +K                  P GKEI++IHEVT T+     +SNCC
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231

[Close]
BLAST of Csa1G025010 vs. Swiss-Prot
Match: RAA6B_ARATH (Ras-related protein RABA6b OS=Arabidopsis thaliana GN=RABA6B PE=2 SV=2)

HSP 1 Score: 285.8 bits (730), Expect = 4.0e-76
Identity = 147/225 (65.33%), Postives = 173/225 (76.89%), Query Frame = 1 

Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           +S DE+CDYLFKAVL GDS VGKSNLLSRFS++EFR DS+PTIGV+FAYRN++V DK +K
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF NI+KWL ELR F +PE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+EEE + LAE E L+F+ETSA +N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 -------DLHKKFEKLVAFPNGKEIISIHEVTPTK----HNSNCC 217
                  D + +    V  P GKEI++IHEVT T+      SNCC
Sbjct: 184 LDNRLNGDGNNESNGAVV-PPGKEIVNIHEVTATRPLSTSLSNCC 227

[Close]
BLAST of Csa1G025010 vs. Swiss-Prot
Match: RAA1H_ARATH (Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 7.3e-62
Identity = 120/213 (56.34%), Postives = 154/213 (72.30%), Query Frame = 1 

Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           ++D DYLFK VLTGDSGVGKSNLLSRF++N+F  DSR TIGVEFA R+I+V DK+VK QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR  TF+N+++WL+ELR+  +   VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL+  R +  EE +  AE EN FFMETSA + +NVE AF E++ +I+ + S+K LD  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +       S CC+
Sbjct: 187 D--DPTTALPKGQMINVGSRDDVSAVKKSGCCA 217

[Close]
BLAST of Csa1G025010 vs. Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.6e-61
Identity = 121/212 (57.08%), Postives = 151/212 (71.23%), Query Frame = 1 

Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           DE+ DYLFK VL GDSGVGKSNLLSRF+KNEF  +S+ TIGVEFA +  KV  K+VK QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATF+N  +WLRELR   +P +V++L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           KCDL     V+ EEA+  AE E+L+FMETSA D  NVE AF E++ +IH I S++++D  
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186

Query: 186 KKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
            +   L   P   E I++ E         CCS
Sbjct: 187 GESADL---PGKGETINVKEDGSVLKRMGCCS 215

[Close]
BLAST of Csa1G025010 vs. Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 121/213 (56.81%), Postives = 156/213 (73.24%), Query Frame = 1 

Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           ++D DYLFK VL GDSGVGKSNLLSRFS+NEF  +S+ TIGVEFA R+I+V DK+VK QI
Sbjct: 8   EDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 67

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GAL+VYDITR  TF+N+++WL+ELR+  +  +VI+LVGN
Sbjct: 68  WDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGN 127

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL   R V  E+A+  AE EN FFMETSA ++LNVE AF E++  I+ +  +K L++ 
Sbjct: 128 KADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVG 187

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +V+  K    CCS
Sbjct: 188 ---DDPAALPKGQTINVGKDDVSAVK-KVGCCS 216

[Close]
BLAST of Csa1G025010 vs. TrEMBL
Match: A0A0A0LS89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025010 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.2e-119
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 219
           TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

[Close]
BLAST of Csa1G025010 vs. TrEMBL
Match: Q6ZYK8_CUCSA (Putative Ras-related GTP-binding protein (Fragment) OS=Cucumis sativus GN=rasgbp PE=2 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.2e-109
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 1 

Query: 16  VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 75
           VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR
Sbjct: 1   VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60

Query: 76  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 135
           AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV
Sbjct: 61  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120

Query: 136 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 195
           QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180

Query: 196 NGKEIISIHEVTPTKHNSNCCSL 219
           NGKEIISIHEVTPTK NSNCCSL
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCSL 203

[Close]
BLAST of Csa1G025010 vs. TrEMBL
Match: A0A0B0MUD4_GOSAR (Ras-related RABA6b-like protein OS=Gossypium arboreum GN=F383_27648 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.9e-83
Identity = 157/217 (72.35%), Postives = 181/217 (83.41%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVL GDS VGKSNLLSRF+K+EFR DS+PTIGVEFAYRN+K+ DK+
Sbjct: 1   MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNVKIGDKV 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +K QIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF N+KKW+ ELREFGN EMVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRTTFQNVKKWMHELREFGNLEMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIH-AIASQ 180
           +LVGNK DL +SR+V EEE + +AE+E LFFMETSA  NLNVEEAFL M+ +IH    SQ
Sbjct: 121 VLVGNKSDLSESRQVSEEEGKKIAEMEGLFFMETSALRNLNVEEAFLRMINKIHETTMSQ 180

Query: 181 KTLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCC 217
           K LD++ K   +V    GKEII+I EVT TKH++NCC
Sbjct: 181 KCLDVNMKESNVVG--AGKEIITIDEVTATKHSNNCC 215

[Close]
BLAST of Csa1G025010 vs. TrEMBL
Match: A0A0D2T6L2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G004100 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.4e-82
Identity = 156/217 (71.89%), Postives = 181/217 (83.41%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVL GDS VGKSNLLSRF+K+EFR DS+PTIGVEFAYRN+K+ D++
Sbjct: 5   MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNVKIGDRV 64

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +K QIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF N+KKW+ ELREFGN EMVI
Sbjct: 65  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRTTFQNVKKWMHELREFGNLEMVI 124

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIH-AIASQ 180
           +LVGNK DL +SR+V EEE + +AE+E LFFMETSA  NLNVEEAFL M+ +IH    SQ
Sbjct: 125 VLVGNKSDLSESRQVSEEEGKKIAEMEGLFFMETSALRNLNVEEAFLRMIYKIHETTMSQ 184

Query: 181 KTLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCC 217
           K LD++ K   +V    GKEII+I EVT TKH++NCC
Sbjct: 185 KCLDVNMKESNVVG--AGKEIITIDEVTATKHSNNCC 219

[Close]
BLAST of Csa1G025010 vs. TrEMBL
Match: B9T2M0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0170930 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.8e-82
Identity = 156/210 (74.29%), Postives = 177/210 (84.29%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           M DS DE+CDYLFKAVL GDS VGKSNLLSRFS++EFR DS+PTIGVEFAYRNI+VADKL
Sbjct: 1   MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +K QIWDTAGQERFRAITSSYYRGALGALLVYDITR ATFDN+KKWL ELRE+GNPEMV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVV 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           +L GNKCDL  +REV EEE ++LAE E L FMETSA +NLNVEEAFLEM+ +IHAI SQK
Sbjct: 121 VLAGNKCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQK 180

Query: 181 TLDLHKK-----FEKLVAFPNGKEIISIHE 206
           +L++  K       K VA P GKE++ I E
Sbjct: 181 SLEVRLKDANNITSKTVALPVGKEVLIIDE 210

[Close]
BLAST of Csa1G025010 vs. TAIR10
Match: AT1G73640.1 (AT1G73640.1 RAB GTPase homolog A6A)

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-80
Identity = 149/228 (65.35%), Postives = 175/228 (76.75%), Query Frame = 1 

Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           D+ +E+CDYLFKAVL GDS VGKSNLLSRFSK+EFRFDS+PTIGVEFAYRN+ V DK++K
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TFDNIKKWL ELR+F NPE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+E+E + LAE E L+F+ETSA +N+NVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 DLHKKFEKL----------VAFPNGKEIISIHEVTPTK----HNSNCC 217
             +K                  P GKEI++IHEVT T+     +SNCC
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231

[Close]
BLAST of Csa1G025010 vs. TAIR10
Match: AT1G18200.1 (AT1G18200.1 RAB GTPase homolog A6B)

HSP 1 Score: 285.8 bits (730), Expect = 2.2e-77
Identity = 147/225 (65.33%), Postives = 173/225 (76.89%), Query Frame = 1 

Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           +S DE+CDYLFKAVL GDS VGKSNLLSRFS++EFR DS+PTIGV+FAYRN++V DK +K
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF NI+KWL ELR F +PE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+EEE + LAE E L+F+ETSA +N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 -------DLHKKFEKLVAFPNGKEIISIHEVTPTK----HNSNCC 217
                  D + +    V  P GKEI++IHEVT T+      SNCC
Sbjct: 184 LDNRLNGDGNNESNGAVV-PPGKEIVNIHEVTATRPLSTSLSNCC 227

[Close]
BLAST of Csa1G025010 vs. TAIR10
Match: AT2G33870.1 (AT2G33870.1 RAB GTPase homolog A1H)

HSP 1 Score: 238.4 bits (607), Expect = 4.1e-63
Identity = 120/213 (56.34%), Postives = 154/213 (72.30%), Query Frame = 1 

Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           ++D DYLFK VLTGDSGVGKSNLLSRF++N+F  DSR TIGVEFA R+I+V DK+VK QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR  TF+N+++WL+ELR+  +   VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL+  R +  EE +  AE EN FFMETSA + +NVE AF E++ +I+ + S+K LD  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +       S CC+
Sbjct: 187 D--DPTTALPKGQMINVGSRDDVSAVKKSGCCA 217

[Close]
BLAST of Csa1G025010 vs. TAIR10
Match: AT1G06400.1 (AT1G06400.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-62
Identity = 121/212 (57.08%), Postives = 151/212 (71.23%), Query Frame = 1 

Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           DE+ DYLFK VL GDSGVGKSNLLSRF+KNEF  +S+ TIGVEFA +  KV  K+VK QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATF+N  +WLRELR   +P +V++L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           KCDL     V+ EEA+  AE E+L+FMETSA D  NVE AF E++ +IH I S++++D  
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186

Query: 186 KKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
            +   L   P   E I++ E         CCS
Sbjct: 187 GESADL---PGKGETINVKEDGSVLKRMGCCS 215

[Close]
BLAST of Csa1G025010 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-61
Identity = 118/213 (55.40%), Postives = 153/213 (71.83%), Query Frame = 1 

Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF++NEF  +S+ TIGVEFA R+I V DK+VK QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR  TF+N+++WL+ELR+  +  +VI+ VGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL   R V  E+A+  AE EN FFMETSA +++NVE AF E++ +I+ + S+K LD+ 
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +         CCS
Sbjct: 187 ---DDPAALPKGQTINVGSKDDVSAVKKVGCCS 216

[Close]
BLAST of Csa1G025010 vs. NCBI nr
Match: gi|449439127|ref|XP_004137339.1| (PREDICTED: ras-related protein RABA6a-like [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 219
           TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

[Close]
BLAST of Csa1G025010 vs. NCBI nr
Match: gi|659106943|ref|XP_008453474.1| (PREDICTED: ras-related protein RABA6a-like [Cucumis melo])

HSP 1 Score: 419.9 bits (1078), Expect = 2.8e-114
Identity = 210/217 (96.77%), Postives = 212/217 (97.70%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADSLDE+CDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNP+MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNKCDLHQSREVQEEEARHLAELENL FMETSAKDNLNVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
           TLDLHKK  KLV FPNGKEIISIHEVTPTK NSNCCS
Sbjct: 181 TLDLHKKIVKLVDFPNGKEIISIHEVTPTKSNSNCCS 217

[Close]
BLAST of Csa1G025010 vs. NCBI nr
Match: gi|46193751|emb|CAG25544.1| (putative Ras-related GTP-binding protein [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 6.1e-109
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 1 

Query: 16  VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 75
           VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR
Sbjct: 1   VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60

Query: 76  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 135
           AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV
Sbjct: 61  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120

Query: 136 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 195
           QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180

Query: 196 NGKEIISIHEVTPTKHNSNCCSL 219
           NGKEIISIHEVTPTK NSNCCSL
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCSL 203

[Close]
BLAST of Csa1G025010 vs. NCBI nr
Match: gi|1000940656|ref|XP_015582916.1| (PREDICTED: ras-related protein RABA6b [Ricinus communis])

HSP 1 Score: 322.0 bits (824), Expect = 8.0e-85
Identity = 162/222 (72.97%), Postives = 186/222 (83.78%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           M DS DE+CDYLFKAVL GDS VGKSNLLSRFS++EFR DS+PTIGVEFAYRNI+VADKL
Sbjct: 3   MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKL 62

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +K QIWDTAGQERFRAITSSYYRGALGALLVYDITR ATFDN+KKWL ELRE+GNPEMV+
Sbjct: 63  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVV 122

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           +L GNKCDL  +REV EEE ++LAE E L FMETSA +NLNVEEAFLEM+ +IHAI SQK
Sbjct: 123 VLAGNKCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQK 182

Query: 181 TLDLHKK-----FEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
           +L++  K       K VA P GKE++ I EV+ TK  ++CCS
Sbjct: 183 SLEVRLKDANNITSKTVALPVGKEVLIIDEVSATK-QASCCS 223

[Close]
BLAST of Csa1G025010 vs. NCBI nr
Match: gi|728819253|gb|KHG03114.1| (Ras-related RABA6b -like protein [Gossypium arboreum])

HSP 1 Score: 314.7 bits (805), Expect = 1.3e-82
Identity = 157/217 (72.35%), Postives = 181/217 (83.41%), Query Frame = 1 

Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVL GDS VGKSNLLSRF+K+EFR DS+PTIGVEFAYRN+K+ DK+
Sbjct: 1   MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNVKIGDKV 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +K QIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF N+KKW+ ELREFGN EMVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRTTFQNVKKWMHELREFGNLEMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIH-AIASQ 180
           +LVGNK DL +SR+V EEE + +AE+E LFFMETSA  NLNVEEAFL M+ +IH    SQ
Sbjct: 121 VLVGNKSDLSESRQVSEEEGKKIAEMEGLFFMETSALRNLNVEEAFLRMINKIHETTMSQ 180

Query: 181 KTLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCC 217
           K LD++ K   +V    GKEII+I EVT TKH++NCC
Sbjct: 181 KCLDVNMKESNVVG--AGKEIITIDEVTATKHSNNCC 215

The following BLAST results are available for this feature:
BLAST of Csa1G025010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAA6A_ARATH2.3e-7965.35Ras-related protein RABA6a OS=Arabidopsis thaliana GN=RABA6A PE=2 SV=1[more]
RAA6B_ARATH4.0e-7665.33Ras-related protein RABA6b OS=Arabidopsis thaliana GN=RABA6B PE=2 SV=2[more]
RAA1H_ARATH7.3e-6256.34Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2 SV=1[more]
RAA1A_ARATH3.6e-6157.08Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1 SV=1[more]
RB11B_TOBAC1.1e-6056.81Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1[more]
BLAST of Csa1G025010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS89_CUCSA1.2e-119100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025010 PE=4 SV=1[more]
Q6ZYK8_CUCSA4.2e-10999.51Putative Ras-related GTP-binding protein (Fragment) OS=Cucumis sativus GN=rasgbp... [more]
A0A0B0MUD4_GOSAR8.9e-8372.35Ras-related RABA6b-like protein OS=Gossypium arboreum GN=F383_27648 PE=4 SV=1[more]
A0A0D2T6L2_GOSRA3.4e-8271.89Uncharacterized protein OS=Gossypium raimondii GN=B456_007G004100 PE=4 SV=1[more]
B9T2M0_RICCO5.8e-8274.29Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0170930 PE=4 SV=1[more]
BLAST of Csa1G025010 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G73640.11.3e-8065.35 RAB GTPase homolog A6A[more]
AT1G18200.12.2e-7765.33 RAB GTPase homolog A6B[more]
AT2G33870.14.1e-6356.34 RAB GTPase homolog A1H[more]
AT1G06400.12.0e-6257.08 Ras-related small GTP-binding family protein[more]
AT5G60860.11.0e-6155.40 RAB GTPase homolog A1F[more]
BLAST of Csa1G025010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439127|ref|XP_004137339.1|1.7e-119100.00PREDICTED: ras-related protein RABA6a-like [Cucumis sativus][more]
gi|659106943|ref|XP_008453474.1|2.8e-11496.77PREDICTED: ras-related protein RABA6a-like [Cucumis melo][more]
gi|46193751|emb|CAG25544.1|6.1e-10999.51putative Ras-related GTP-binding protein [Cucumis sativus][more]
gi|1000940656|ref|XP_015582916.1|8.0e-8572.97PREDICTED: ras-related protein RABA6b [Ricinus communis][more]
gi|728819253|gb|KHG03114.1|1.3e-8272.35Ras-related RABA6b -like protein [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0045491 xylan metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU121134cucumber EST collection version 3.0transcribed_cluster
CU122109cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G025010.1Csa1G025010.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU122109CU122109transcribed_cluster
CU121134CU121134transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 14..174
score: 3.0
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 12..167
score: 8.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 5..216
score: 2.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..189
score: 1.66
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 36..52
score: 1.1E-40coord: 151..173
score: 1.1E-40coord: 54..76
score: 1.1E-40coord: 13..34
score: 1.1E-40coord: 116..129
score: 1.1
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..218
score: 1.6E
NoneNo IPR availablePANTHERPTHR24073:SF486RAS-RELATED PROTEIN RABA6A-RELATEDcoord: 1..218
score: 1.6E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..176
score: 2.2
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..176
score: 5.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..176
score: 2.4E
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 18..215
score: 1.
NoneNo IPR availablePROFILEPS51419RABcoord: 8..216
score: 34

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G025010MELO3C017352Melon (DHL92) v3.5.1cumeB055
Csa1G025010ClCG06G014380Watermelon (Charleston Gray)cuwcgB082
Csa1G025010Lsi06G012920Bottle gourd (USVL1VR-Ls)culsiB071
Csa1G025010MELO3C017352.2Melon (DHL92) v3.6.1cumedB047
Csa1G025010Cla97C06G123840Watermelon (97103) v2cuwmbB079
Csa1G025010Bhi02G000095Wax gourdcuwgoB077
Csa1G025010CSPI01G04280Wild cucumber (PI 183967)cpicuB000
Csa1G025010Cucsa.111500Cucumber (Gy14) v1cgycuB137
Csa1G025010CmoCh11G003130Cucurbita moschata (Rifu)cmocuB076
Csa1G025010Cp4.1LG04g13580Cucurbita pepo (Zucchini)cpecuB654
Csa1G025010CsGy1G004170Cucumber (Gy14) v2cgybcuB001
Csa1G025010Carg09106Silver-seed gourdcarcuB0622
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G025010Watermelon (97103) v2cuwmbB055
Csa1G025010Wax gourdcuwgoB040
Csa1G025010Cucumber (Chinese Long) v2cucuB000
Csa1G025010Cucumber (Gy14) v1cgycuB160
Csa1G025010Cucumber (Gy14) v1cgycuB405
Csa1G025010Cucurbita maxima (Rimu)cmacuB050
Csa1G025010Cucurbita maxima (Rimu)cmacuB087
Csa1G025010Cucurbita maxima (Rimu)cmacuB221
Csa1G025010Cucurbita maxima (Rimu)cmacuB393
Csa1G025010Cucurbita moschata (Rifu)cmocuB039
Csa1G025010Cucurbita moschata (Rifu)cmocuB207
Csa1G025010Melon (DHL92) v3.5.1cumeB033
Csa1G025010Watermelon (Charleston Gray)cuwcgB058
Csa1G025010Watermelon (97103) v1cuwmB063
Csa1G025010Watermelon (97103) v1cuwmB095
Csa1G025010Cucurbita pepo (Zucchini)cpecuB031
Csa1G025010Cucurbita pepo (Zucchini)cpecuB363
Csa1G025010Cucurbita pepo (Zucchini)cpecuB509
Csa1G025010Bottle gourd (USVL1VR-Ls)culsiB025
Csa1G025010Cucumber (Gy14) v2cgybcuB196
Csa1G025010Melon (DHL92) v3.6.1cumedB028
Csa1G025010Silver-seed gourdcarcuB0416
Csa1G025010Silver-seed gourdcarcuB0801