Carg09106 (gene) Silver-seed gourd

Overview
NameCarg09106
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRas-related protein like
LocationCucurbita_argyrosperma_scaffold_063 : 588045 .. 589596 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTCATTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCCCGTTTCGCCAGAGCCGAGTTCCGATTGGATTCCAAACCTACCATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAACTCATCAAGACCCAAATCTGGGACACCGCCGGCCAAGAAAGGTCACTCTTCTTCTTTCCATCGCTTTTCTTAATTATGCTTAGATAAGTTTATGCGTTCTAAAAATTTTAAAAACTCTATAGGTGACGTTGGGACATGTTCTTAATTTATTTTGTTTTATTATTATTATTATTATTATTATTATTATTTTTAAAAAAATATTAGGTCGGATTAAAAGGAGAGAAAAAATTGGTCCTTTTGGTGGGACCCATGAACCTAAAAGAGAAATGAAACCTGTCGTTTAGCGATTGATTAAAGGCTAATATGTCTCAAAATAAAACAAGACATTCCAAACCTAGGGTTCATGGAAGGAATAGTGTCTTAAATTTAAATGTCCTAATTATTATTAATTACAACCTTAATCTAAGTTATTCACTAATCCATCTTTTTCTACCAAATTTTATTCCCTCCATTTATGAGCCGATTTTCTGCATTAAATAAAAAAGGCTACCATTTCTAATTTTTTCCATAAATTTAAGCCTGTTTTTTAGGTTTATTTTATTGTCCAATAAGAATTTGACACGTAGAAACCAGAAGTAAAAAGGTGTCCGGTAAAAAGATATTAAAGGAAAATAATTAAATTATTATTATCCGCGACAAAGGCGGTTTGTTCCGGAAGGCTACAAGTTTCTAAAGGGGTCAGAAAAAGTTATTTTCTATTATCTTAATATTTTAATACCAAATTTGTTAATAATGTCATTTTTTTTTATTTATTGTTTTATTTGTTACATTCAAATCTACGAATTTAATTTTATGTTAATATATAGTTTTAATACCTTAATGTTCTACTAAGTTTTTAATCTAAATTTGATTAAGACGGGTATAGATTTAGGGCAATTACAAGCTCTTATTATCGAGGAGCATTGGGAGCATTGCTAGTATATGATATAACTCGAGCGGTCACATTTGAGAATGTGAAGAAGTGGCTACGAGAGCTAAGAGATTTTGGGAATTCGGACATGGTCATTGTTCTAGTTGGGAATAAAAGTGATTTGAGCCATTCTCGAGAAGTGCATGAAGAAGAAGGACGGCGTTTGGCAGAGTCTGAAGACTTATTTTTCATGGAAACTTCTGCCATGGATAATGTGAACGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCATGCGATTGCTTCCCAGAAAAGCCTAAATTTACCGAAACGAATTGAAAAGCTTGTTGCTTTTCCAAATGGAAAAGAGATTGTTCATGAAGTTACTCCTACCAAACCCAATTCACATTGTTGTTATTTATGAAATTTTAATTTTAAATAGCGCCTTTACCTTATATTTTTGTTGAAGTTTTATTTTTTATTTATTTATTTATTTATATA

mRNA sequence

ATGGCGGATTCATTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCCCGTTTCGCCAGAGCCGAGTTCCGATTGGATTCCAAACCTACCATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAACTCATCAAGACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGCTCTTATTATCGAGGAGCATTGGGAGCATTGCTAGTATATGATATAACTCGAGCGGTCACATTTGAGAATGTGAAGAAGTGGCTACGAGAGCTAAGAGATTTTGGGAATTCGGACATGGTCATTGTTCTAGTTGGGAATAAAAGTGATTTGAGCCATTCTCGAGAAGTGCATGAAGAAGAAGGACGGCGTTTGGCAGAGTCTGAAGACTTATTTTTCATGGAAACTTCTGCCATGGATAATGTGAACGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCATGCGATTGCTTCCCAGAAAAGCCTAAATTTACCGAAACGAATTGAAAAGCTTGTTGCTTTTCCAAATGGAAAAGAGATTGTTCATGAAGTTACTCCTACCAAACCCAATTCACATTGTTGTTATTTATGAAATTTTAATTTTAAATAGCGCCTTTACCTTATATTTTTGTTGAAGTTTTATTTTTTATTTATTTATTTATTTATATA

Coding sequence (CDS)

ATGGCGGATTCATTCGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCCCGTTTCGCCAGAGCCGAGTTCCGATTGGATTCCAAACCTACCATCGGCGTCGAATTCGCTTACCGGAATATCAAGGTCGCCGATAAACTCATCAAGACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGCTCTTATTATCGAGGAGCATTGGGAGCATTGCTAGTATATGATATAACTCGAGCGGTCACATTTGAGAATGTGAAGAAGTGGCTACGAGAGCTAAGAGATTTTGGGAATTCGGACATGGTCATTGTTCTAGTTGGGAATAAAAGTGATTTGAGCCATTCTCGAGAAGTGCATGAAGAAGAAGGACGGCGTTTGGCAGAGTCTGAAGACTTATTTTTCATGGAAACTTCTGCCATGGATAATGTGAACGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCATGCGATTGCTTCCCAGAAAAGCCTAAATTTACCGAAACGAATTGAAAAGCTTGTTGCTTTTCCAAATGGAAAAGAGATTGTTCATGAAGTTACTCCTACCAAACCCAATTCACATTGTTGTTATTTATGA

Protein sequence

MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSHCCYL
Homology
[Close]
BLAST of Carg09106 vs. NCBI nr
Match: XP_022933916.1 (ras-related protein RABA6b-like [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 1.8e-117
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSHCCYL 217
           SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNS+CCYL
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVHEVTPTKPNSYCCYL 216

[Close]
BLAST of Carg09106 vs. NCBI nr
Match: XP_023529393.1 (ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.3 bits (1087), Expect = 4.9e-115
Identity = 214/218 (98.17%), Postives = 215/218 (98.62%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDLSHSREV EEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSHCCYL 217
           SLNLPKRIEKLVAFPNGKEIV  HEVTPTKPNS+CCYL
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVSIHEVTPTKPNSYCCYL 218

[Close]
BLAST of Carg09106 vs. NCBI nr
Match: XP_023003771.1 (ras-related protein RABA6a-like [Cucurbita maxima])

HSP 1 Score: 413.7 bits (1062), Expect = 3.9e-112
Identity = 209/218 (95.87%), Postives = 211/218 (96.79%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRA TFENVKKWLRELRDFGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAATFENVKKWLRELRDFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDL+HSREV EEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLNHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIV--HEVTPTKPNSHCCYL 217
           SLNLPKRIEK VAFPNG EIV  HEVTPTKPNS+CC L
Sbjct: 181 SLNLPKRIEKFVAFPNGNEIVSIHEVTPTKPNSYCCSL 218

[Close]
BLAST of Carg09106 vs. NCBI nr
Match: XP_022134689.1 (ras-related protein RABA6b [Momordica charantia])

HSP 1 Score: 380.9 bits (977), Expect = 2.8e-102
Identity = 188/216 (87.04%), Postives = 201/216 (93.06%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFA++EFRLDSKPTIGVEFAYRNIKVA KL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFAKSEFRLDSKPTIGVEFAYRNIKVAGKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IK QIWDTAGQERFRAITSSYYRGALGALLVYD+TR  TFENVKKWLRELR+FGNSDMVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDVTRVATFENVKKWLRELREFGNSDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL HSREV EEEGR LAESE LFFMETSAM NVNVEE FL+MVRRIH IASQK
Sbjct: 121 ILVGNKCDLGHSREVQEEEGRLLAESESLFFMETSAMKNVNVEEVFLQMVRRIHEIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEI--VHEVTPTKPNSHCC 215
           +L+LPK+IEKL AFPNGKEI  +H+VTPTKP+S+CC
Sbjct: 181 ALDLPKQIEKLAAFPNGKEIISIHDVTPTKPDSYCC 216

[Close]
BLAST of Carg09106 vs. NCBI nr
Match: XP_004137339.1 (PREDICTED: ras-related protein RABA6a-like [Cucumis sativus] >KGN63869.1 hypothetical protein Csa_1G025010 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 7.1e-98
Identity = 181/218 (83.03%), Postives = 198/218 (90.83%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+N+KKWLRELR+FGN +MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL  SREV EEE R LAE E+LFFMETSA DN+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEI--VHEVTPTKPNSHCCYL 217
           +L+L K+ EKLVAFPNGKEI  +HEVTPTK NS+CC L
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

[Close]
BLAST of Carg09106 vs. TAIR10
Match: AT1G18200.1 (RAB GTPase homolog A6B)

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-80
Identity = 152/226 (67.26%), Postives = 178/226 (78.76%), Query Frame = 0 

Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           +S+DEECDYLFKAVL GDS VGKSNLLSRF+R EFRLDSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR +TF+N++KWL ELR F + + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV EEEG+ LAESE L+F+ETSA++N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK-I 183

Query: 183 NLPKRI-------EKLVAFPNGKEIV--HEVTPTKP----NSHCCY 216
            L  R+             P GKEIV  HEVT T+P     S+CCY
Sbjct: 184 VLDNRLNGDGNNESNGAVVPPGKEIVNIHEVTATRPLSTSLSNCCY 228

[Close]
BLAST of Carg09106 vs. TAIR10
Match: AT1G73640.1 (RAB GTPase homolog A6A)

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-80
Identity = 150/229 (65.50%), Postives = 177/229 (77.29%), Query Frame = 0 

Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           D+++EECDYLFKAVL GDS VGKSNLLSRF++ EFR DSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF+N+KKWL ELRDF N + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV E+EG+ LAESE L+F+ETSA++NVNVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 NLPKRIEKL----------VAFPNGKEIV--HEVTPTKP----NSHCCY 216
           +  K                  P GKEIV  HEVT T+P    +S+CC+
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCCF 232

[Close]
BLAST of Carg09106 vs. TAIR10
Match: AT5G60860.1 (RAB GTPase homolog A1F)

HSP 1 Score: 241.9 bits (616), Expect = 3.7e-64
Identity = 119/195 (61.03%), Postives = 155/195 (79.49%), Query Frame = 0 

Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D+E DYLFK VL GDSGVGKSNLLSRF R EF L+SK TIGVEFA R+I V DK++K QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  ++++VI+ VGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  E+ +  AE E+ FFMETSA++++NVE AF E++ +I+ + S+K+L++ 
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 ---DDPAALPKGQTI 198

[Close]
BLAST of Carg09106 vs. TAIR10
Match: AT4G18430.1 (RAB GTPase homolog A1E)

HSP 1 Score: 238.4 bits (607), Expect = 4.0e-63
Identity = 122/213 (57.28%), Postives = 162/213 (76.06%), Query Frame = 0 

Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF R EF ++SK TIGVEFA R++ V +K+IK Q+
Sbjct: 7   DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYDITR +TFENV++WL+ELRD  ++++VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  EE R  +E E++FFMETSA+D  NVE+AF  ++ +I+ + S+K+L+  
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-- 186

Query: 186 KRIEKLVAFPNGKEI----VHEVTPTKPNSHCC 215
                 ++ P G+ I      +VT  K +S CC
Sbjct: 187 -GTGDPMSLPKGQTIDIGNKDDVTAVK-SSGCC 215

[Close]
BLAST of Carg09106 vs. TAIR10
Match: AT2G33870.1 (RAB GTPase homolog A1H)

HSP 1 Score: 238.0 bits (606), Expect = 5.3e-63
Identity = 117/195 (60.00%), Postives = 155/195 (79.49%), Query Frame = 0 

Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           +++ DYLFK VLTGDSGVGKSNLLSRF R +F  DS+ TIGVEFA R+I+V DK++K QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  +++ VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL+H R +  EE +  AE E+ FFMETSA++ +NVE AF E++ +I+ + S+K+L+  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 D--DPTTALPKGQMI 199

[Close]
BLAST of Carg09106 vs. Swiss-Prot
Match: sp|Q0WQN4|RAA6B_ARATH (Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 3.9e-79
Identity = 152/226 (67.26%), Postives = 178/226 (78.76%), Query Frame = 0 

Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           +S+DEECDYLFKAVL GDS VGKSNLLSRF+R EFRLDSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR +TF+N++KWL ELR F + + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV EEEG+ LAESE L+F+ETSA++N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK-I 183

Query: 183 NLPKRI-------EKLVAFPNGKEIV--HEVTPTKP----NSHCCY 216
            L  R+             P GKEIV  HEVT T+P     S+CCY
Sbjct: 184 VLDNRLNGDGNNESNGAVVPPGKEIVNIHEVTATRPLSTSLSNCCY 228

[Close]
BLAST of Carg09106 vs. Swiss-Prot
Match: sp|Q9C9U7|RAA6A_ARATH (Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78
Identity = 150/229 (65.50%), Postives = 177/229 (77.29%), Query Frame = 0 

Query: 3   DSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIK 62
           D+++EECDYLFKAVL GDS VGKSNLLSRF++ EFR DSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF+N+KKWL ELRDF N + V+VL
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSL 182
           VGNKSDL  SREV E+EG+ LAESE L+F+ETSA++NVNVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 NLPKRIEKL----------VAFPNGKEIV--HEVTPTKP----NSHCCY 216
           +  K                  P GKEIV  HEVT T+P    +S+CC+
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCCF 232

[Close]
BLAST of Carg09106 vs. Swiss-Prot
Match: sp|Q9FJH0|RAA1F_ARATH (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.6e-63
Identity = 119/195 (61.03%), Postives = 155/195 (79.49%), Query Frame = 0 

Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D+E DYLFK VL GDSGVGKSNLLSRF R EF L+SK TIGVEFA R+I V DK++K QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  ++++VI+ VGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  E+ +  AE E+ FFMETSA++++NVE AF E++ +I+ + S+K+L++ 
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 ---DDPAALPKGQTI 198

[Close]
BLAST of Carg09106 vs. Swiss-Prot
Match: sp|O49513|RAA1E_ARATH (Ras-related protein RABA1e OS=Arabidopsis thaliana OX=3702 GN=RABA1E PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 7.3e-62
Identity = 122/213 (57.28%), Postives = 162/213 (76.06%), Query Frame = 0 

Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF R EF ++SK TIGVEFA R++ V +K+IK Q+
Sbjct: 7   DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYDITR +TFENV++WL+ELRD  ++++VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL H R V  EE R  +E E++FFMETSA+D  NVE+AF  ++ +I+ + S+K+L+  
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-- 186

Query: 186 KRIEKLVAFPNGKEI----VHEVTPTKPNSHCC 215
                 ++ P G+ I      +VT  K +S CC
Sbjct: 187 -GTGDPMSLPKGQTIDIGNKDDVTAVK-SSGCC 215

[Close]
BLAST of Carg09106 vs. Swiss-Prot
Match: sp|Q1PEX3|RAA1H_ARATH (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.5e-62
Identity = 117/195 (60.00%), Postives = 155/195 (79.49%), Query Frame = 0 

Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQI 65
           +++ DYLFK VLTGDSGVGKSNLLSRF R +F  DS+ TIGVEFA R+I+V DK++K QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR VTFENV++WL+ELRD  +++ VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLP 185
           K+DL+H R +  EE +  AE E+ FFMETSA++ +NVE AF E++ +I+ + S+K+L+  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KRIEKLVAFPNGKEI 201
              +   A P G+ I
Sbjct: 187 D--DPTTALPKGQMI 199

[Close]
BLAST of Carg09106 vs. TrEMBL
Match: tr|A0A0A0LS89|A0A0A0LS89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.7e-98
Identity = 181/218 (83.03%), Postives = 198/218 (90.83%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+N+KKWLRELR+FGN +MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL  SREV EEE R LAE E+LFFMETSA DN+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEI--VHEVTPTKPNSHCCYL 217
           +L+L K+ EKLVAFPNGKEI  +HEVTPTK NS+CC L
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

[Close]
BLAST of Carg09106 vs. TrEMBL
Match: tr|A0A1S3BWB9|A0A1S3BWB9_CUCME (ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 6.8e-97
Identity = 180/216 (83.33%), Postives = 195/216 (90.28%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+N+KKWLRELR+FGN DMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL  SREV EEE R LAE E+L FMETSA DN+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEI--VHEVTPTKPNSHCC 215
           +L+L K+I KLV FPNGKEI  +HEVTPTK NS+CC
Sbjct: 181 TLDLHKKIVKLVDFPNGKEIISIHEVTPTKSNSNCC 216

[Close]
BLAST of Carg09106 vs. TrEMBL
Match: tr|Q6ZYK8|Q6ZYK8_CUCSA (Putative Ras-related GTP-binding protein (Fragment) OS=Cucumis sativus OX=3659 GN=rasgbp PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.6e-90
Identity = 169/203 (83.25%), Postives = 185/203 (91.13%), Query Frame = 0 

Query: 16  VLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKLIKTQIWDTAGQERFR 75
           VLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL+KTQIWDTAGQERFR
Sbjct: 1   VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60

Query: 76  AITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVIVLVGNKSDLSHSREV 135
           AITSSYYRGALGALLVYDITR  TF+N+KKWLRELR+FGN +MVI+LVGNK DL  SREV
Sbjct: 61  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120

Query: 136 HEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQKSLNLPKRIEKLVAFP 195
            EEE R LAE E+LFFMETSA DN+NVEEAFLEMVRRIHAIASQK+L+L K+ EKLVAFP
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180

Query: 196 NGKEI--VHEVTPTKPNSHCCYL 217
           NGKEI  +HEVTPTKPNS+CC L
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCSL 203

[Close]
BLAST of Carg09106 vs. TrEMBL
Match: tr|B9IEB2|B9IEB2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G039700v3 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 8.3e-87
Identity = 164/220 (74.55%), Postives = 188/220 (85.45%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADS+DEECDYLFKAVL GDS VGKSNLLSRF+R EFRLDSKPTIGVEFAYRNI+V DKL
Sbjct: 1   MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IK QIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+NVKKWL ELRDFG+SDMV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVV 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSD+SH REV E++G+ LAE+E L+FMETSA++N+NVEEAF++M+ RIH IASQK
Sbjct: 121 VLVGNKSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQK 180

Query: 181 SLNLPKR---IEKLVAFPNGKEIVH---EVTPTKPNSHCC 215
           SL   K    I  + A P GKE+++   EV+ TK  S+CC
Sbjct: 181 SLEAKKNETTISTIKALPVGKEVINIDDEVSATKQASYCC 220

[Close]
BLAST of Carg09106 vs. TrEMBL
Match: tr|A0A2I0LC98|A0A2I0LC98_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_001780 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-86
Identity = 168/215 (78.14%), Postives = 180/215 (83.72%), Query Frame = 0 

Query: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60
           MADSFDEECDYLFKAVL GDS VGKSNLLSRFAR EF LDSKPTIGVEFAYRN+KV DKL
Sbjct: 1   MADSFDEECDYLFKAVLIGDSAVGKSNLLSRFARDEFHLDSKPTIGVEFAYRNVKVGDKL 60

Query: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120
           IK QIWDTAGQERFRAITSSYYRGALGALLVYDITR VTFENV+KWLRELRDFGN DMV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRVTFENVRKWLRELRDFGNPDMVV 120

Query: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180
           VLVGNKSDLSHSREV ++EG+ LAE+E+L FMETSA++NVNVEEAFLEM+ RIH I SQK
Sbjct: 121 VLVGNKSDLSHSREVKQDEGKDLAEAENLCFMETSALENVNVEEAFLEMINRIHKITSQK 180

Query: 181 SLNLPKRIEKLVAFPNGKEIVH--EVTPTKPNSHC 214
            L              GKEIV   EVT TK +S C
Sbjct: 181 ILETKSNETVSNGLQPGKEIVQIDEVTATKQSSCC 215

The following BLAST results are available for this feature:
BLAST of Carg09106 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933916.11.8e-11799.54ras-related protein RABA6b-like [Cucurbita moschata][more]
XP_023529393.14.9e-11598.17ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo][more]
XP_023003771.13.9e-11295.87ras-related protein RABA6a-like [Cucurbita maxima][more]
XP_022134689.12.8e-10287.04ras-related protein RABA6b [Momordica charantia][more]
XP_004137339.17.1e-9883.03PREDICTED: ras-related protein RABA6a-like [Cucumis sativus] >KGN63869.1 hypothe... [more]
BLAST of Carg09106 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18200.12.1e-8067.26RAB GTPase homolog A6B[more]
AT1G73640.16.2e-8065.50RAB GTPase homolog A6A[more]
AT5G60860.13.7e-6461.03RAB GTPase homolog A1F[more]
AT4G18430.14.0e-6357.28RAB GTPase homolog A1E[more]
AT2G33870.15.3e-6360.00RAB GTPase homolog A1H[more]
BLAST of Carg09106 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0WQN4|RAA6B_ARATH3.9e-7967.26Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2[more]
sp|Q9C9U7|RAA6A_ARATH1.1e-7865.50Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1[more]
sp|Q9FJH0|RAA1F_ARATH6.6e-6361.03Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1[more]
sp|O49513|RAA1E_ARATH7.3e-6257.28Ras-related protein RABA1e OS=Arabidopsis thaliana OX=3702 GN=RABA1E PE=2 SV=1[more]
sp|Q1PEX3|RAA1H_ARATH9.5e-6260.00Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1[more]
BLAST of Carg09106 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LS89|A0A0A0LS89_CUCSA4.7e-9883.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1[more]
tr|A0A1S3BWB9|A0A1S3BWB9_CUCME6.8e-9783.33ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=... [more]
tr|Q6ZYK8|Q6ZYK8_CUCSA1.6e-9083.25Putative Ras-related GTP-binding protein (Fragment) OS=Cucumis sativus OX=3659 G... [more]
tr|B9IEB2|B9IEB2_POPTR8.3e-8774.55Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G039700v3 PE=... [more]
tr|A0A2I0LC98|A0A2I0LC98_PUNGR4.1e-8678.14Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_001780 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09106-RACarg09106-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 151..173
score: 43.6
coord: 116..129
score: 53.15
coord: 13..34
score: 52.06
coord: 36..52
score: 35.27
coord: 54..76
score: 50.33
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..176
e-value: 4.2E-100
score: 348.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..176
e-value: 2.7E-10
score: 12.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..176
e-value: 2.5E-28
score: 110.1
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 18..216
e-value: 1.9E-9
score: 47.4
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 5..214
e-value: 2.6E-64
score: 218.3
NoneNo IPR availablePANTHERPTHR24073:SF872RAS-RELATED PROTEIN RABA1Ecoord: 5..214
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 5..214
NoneNo IPR availablePROSITEPS51419RABcoord: 8..214
score: 32.777
NoneNo IPR availableCDDcd01868Rab11_likecoord: 10..174
e-value: 1.00651E-107
score: 308.72
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 14..174
e-value: 1.1E-58
score: 197.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 12..167
e-value: 4.3E-31
score: 105.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..191

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09106Cla018930Watermelon (97103) v1carwmB0594
Carg09106Csa1G025010Cucumber (Chinese Long) v2carcuB0622
Carg09106MELO3C017352Melon (DHL92) v3.5.1carmeB0599
Carg09106ClCG06G014380Watermelon (Charleston Gray)carwcgB0581
Carg09106CSPI01G04280Wild cucumber (PI 183967)carcpiB0628
Carg09106Cucsa.111500Cucumber (Gy14) v1carcgyB0668
Carg09106CmaCh11G003060Cucurbita maxima (Rimu)carcmaB0830
Carg09106CmoCh11G003130Cucurbita moschata (Rifu)carcmoB0808
Carg09106Lsi06G012910Bottle gourd (USVL1VR-Ls)carlsiB540
Carg09106Cp4.1LG04g13580Cucurbita pepo (Zucchini)carcpeB0847
Carg09106CsGy1G004170Cucumber (Gy14) v2carcgybB0594
Carg09106MELO3C017352.2Melon (DHL92) v3.6.1carmedB0606
Carg09106CsaV3_1G004280Cucumber (Chinese Long) v3carcucB0629
Carg09106Cla97C06G123840Watermelon (97103) v2carwmbB0623
Carg09106Bhi02G000095Wax gourdcarwgoB0710
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09106Wax gourdcarwgoB0705
Carg09106Silver-seed gourdcarcarB416
Carg09106Silver-seed gourdcarcarB537
Carg09106Cucumber (Gy14) v2carcgybB0595
Carg09106Cucumber (Gy14) v1carcgyB0670
Carg09106Cucurbita maxima (Rimu)carcmaB0828
Carg09106Cucurbita maxima (Rimu)carcmaB0832
Carg09106Cucurbita maxima (Rimu)carcmaB0834
Carg09106Cucurbita moschata (Rifu)carcmoB0806
Carg09106Cucurbita moschata (Rifu)carcmoB0810
Carg09106Cucurbita moschata (Rifu)carcmoB0812
Carg09106Cucurbita pepo (Zucchini)carcpeB0840
Carg09106Cucurbita pepo (Zucchini)carcpeB0843
Carg09106Cucurbita pepo (Zucchini)carcpeB0846
Carg09106Wild cucumber (PI 183967)carcpiB0629
Carg09106Cucumber (Chinese Long) v2carcuB0623
Carg09106Cucumber (Chinese Long) v3carcucB0630
Carg09106Bottle gourd (USVL1VR-Ls)carlsiB538
Carg09106Melon (DHL92) v3.5.1carmeB0598
Carg09106Melon (DHL92) v3.6.1carmedB0605
Carg09106Watermelon (Charleston Gray)carwcgB0579
Carg09106Watermelon (97103) v1carwmB0592
Carg09106Watermelon (97103) v2carwmbB0621