CsaV3_1G004280 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G004280
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	ras-related protein RABA6a-like
Location	chr1 : 2678463 .. 2681734 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAACATAACTAACATAAATAGTATTTAAAAACAAAACCCATTATGAGATGAACATCTAATTTAACAAAAAGAAAAAGAGGAATATAATATAAAAACAAAATCATTAAAAGAAATTGGAGAAAAGGGTTATTATTAGTTTTTAAAGGTTTAAGAAAGGCTCTCTGTTTTGGCAGAGCAGAGAAACAGAGAAATGGCGGATTCGTTGGACGAAGACTGTGATTATCTCTTCAAGGCGGTTCTTACGGGCGATTCCGGCGTTGGAAAATCCAATCTCCTCTCTCGTTTCTCCAAAAATGAATTCCGATTCGACTCTAGACCTACGATCGGTGTCGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAACTCGTCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGGTCAATCTTCTTCTCCCTTAATCTTTTTCTTCAAATAATTAGTTTCGAGAATTTCTTTCATTCGGTCTCCCTGTTTCGATTAAGTTCTAAGTGTTGTTCCACGAATAAATTATTTAGGTTGAATATGAAGTATTGATTAATTTTCAGCCATATGTTCAATGTTCAAATTTTCTAATATATTTTAATTTAAAATAATTTATTTGTTTTAAGAAATAACATAATTATTTACCAAATAAATCATTATTTGTTTCTTAGTTTGACAATCTCTAAGATAAGAGATTGAATTTTTTATATCAATTAGGAAGAAGCTAAACTCACATGAATTATCTTCCTACTCAAGTTAACTTGACAAATACGAGCATTTATCATTTCTTTTAGTTTTTTTCTTTCCTATATTAAATTATGAGGATGTTTTCTTAAAATAAAGAAGTGATCTCTCCATTGGAAAAAAAAAAAAAAAATCTCTTTATATATCATCTTATAGTTCAACAATTCAACCTAGAAAGCTTAAGAACATAAATATTCTTCTAGGGTTTCTAGTCCAACAATGATTAAACCTATTAGGTAAACTTTTGGGATTTAGAAGAGAGGAAACTTTAATCTTTTTTTAGGGACCCATAGACCTAAAAGGAGAATTTAGACTTGTCCTTTTGTGATTGATTGAAGGCTAATACGTTCGTTTTTCTTTTGATAACATGTGAATAAAAGAATCAAATTTCTTATAAGTTGAACTAGGTTTATTTTGATTAATATTAATTCTTTTTTAAAATGAAAGTTGGAGCTATAATCTCTCTTTTCATACCAAATATTATTCTTTTGAGTCATGAGCCACTGTCCAACATTAAATATGATAGTTTTAATGACGGTCTTTAAAAGTCATTATTTAAGGACAAAAAAAACTTTTCGTAAATTTGAACCCATTCTTTTAGGTTTGTTTGATTTAGAATCATTTTATATTAAGTTAAAGAGTTTGTCCCAATTAGTGTTGGAATGTTTTCTTTTTTCTACATTTTTCTTAATAATTTGTTTAATCATTTTAAATTTTTACTAATTTCAGCTACAAAAGATATAAACATTTTTTTAATAACTATGTTATAAACTTTTTAGTTGTTCCACCAAATTTACTTCTGTTTTCATTGGACCAATCATTGTATGTGTGTGTATATATATATATATTATGATAAATTTTGTATTTCTTCAAAATAAAAAAGTAGGCCTTTTCTTTTGTTAATTCATGTAGATCAATAGTGATGATATGATATTATACGTTTTAGTCAATTGATGACTTAAGATGATATTAGGTTGTTGAAAACAAATTAAGGTTAGAATTCTTTTATTATTATTAAAAAAATTAACGGTAATTTTTTTAGTACAATTTAGAGTTGAAAGAATTTGAACTTAAAATCTCTTAGTCACGTATTGAATCTTTGATAGTAAGAACAATTAATTGTGCAGCTTTTCTAATGACAACTTTTAAAATTATTTACAATCTATAGTCAAGAATAATAGTTTATCATGACCTATTATAGATACACTGTATAAACGATATTTTGTAAATATTTTGATTTATTTTATATATTAAAATATATATATATATTATTATTATTATTCCAATGAGGATTTGACACGTGAAAGGTTGTACGGTAAAGGGCATCCCCAAACAAAGGGCTTTAAGGCGACACCTTTATTTAAATCTTTCATACTTTTAAAGAAATTTTTAATTCACTCATTTGTTGTTGTTTTCTTTTTCTTTCTCTCCAAATTTTTTTCTTTTTTCTTTTTTATTGACAATTTTACAGTAAAAAATTGAAAAATTCCCCATTTTATATGTTACTTGAGAAAAGAATTTATTAGTATTAATTTTATAAATTTTGACATTAACCATATGAATGAAAATTGAATAAGAGAAAGCGATATTTTGATTCATTAAAAGATAATTTAAAGAATGTTTAAAATAAGAAGTATGGTGTAAAGTTGCTTAAACCGTAGTTATTGAAGTATGTGTTTAAGGTATTATCGTTATTTAATCTAGAGTTATGAAATGTATGTTTACGAACATTTATGTTAATGAAAAATTGGTACTTTGATTAATCCTATAGTTTATATTTATTCCTTGGGGTTTGAGTTTCTTTTGTTTTTCCTTTCCAAAATATATAGTTTATTTGTTTGTTGCCTAACATCTAAATCTTAAATGTTGATATTGTAATCTTAATTTGAATGTAATAACACTACATACAGATTTAGGGCAATTACAAGTTCTTATTATCGGGGAGCATTAGGAGCATTACTTGTTTACGACATAACTCGCGTGGCTACATTTGATAACATAAAGAAGTGGCTACGAGAGTTGAGAGAGTTTGGAAATCCGGAAATGGTGATCATTCTAGTTGGAAACAAATGCGACTTACATCAATCGCGAGAAGTACAAGAAGAAGAAGCGCGACATTTGGCCGAGTTGGAGAACTTGTTTTTCATGGAAACTTCTGCCAAAGATAATTTGAATGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCACGCCATCGCCTCTCAAAAGACATTGGATTTGCATAAAAAATTTGAAAAGCTTGTTGCTTTTCCAAACGGAAAAGAGATTATTAGTATTCATGAAGTAACCCCAACCAAACACAATTCAAATTGTTGCTCTTTGTGAAAATTTAGTTTTGAATGGTGAGTTTAGCTTATAGTTTGCTTGAACTTATCTTTATCTTATAAATATATTTTATTTTTAGCCTATAAATATTGTGTAATTTCATAGCAACTAAAACTATAAATATATACTATCACATTATATGTATATATAAATTATGCTACCATAAGGAAAAAAATTATTTTTC

mRNA sequence

ATGGCGGATTCGTTGGACGAAGACTGTGATTATCTCTTCAAGGCGGTTCTTACGGGCGATTCCGGCGTTGGAAAATCCAATCTCCTCTCTCGTTTCTCCAAAAATGAATTCCGATTCGACTCTAGACCTACGATCGGTGTCGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAACTCGTCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGGGGAGCATTAGGAGCATTACTTGTTTACGACATAACTCGCGTGGCTACATTTGATAACATAAAGAAGTGGCTACGAGAGTTGAGAGAGTTTGGAAATCCGGAAATGGTGATCATTCTAGTTGGAAACAAATGCGACTTACATCAATCGCGAGAAGTACAAGAAGAAGAAGCGCGACATTTGGCCGAGTTGGAGAACTTGTTTTTCATGGAAACTTCTGCCAAAGATAATTTGAATGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCACGCCATCGCCTCTCAAAAGACATTGGATTTGCATAAAAAATTTGAAAAGCTTGTTGCTTTTCCAAACGGAAAAGAGATTATTAGTATTCATGAAGTAACCCCAACCAAACACAATTCAAATTGTTGCTCTTTGTGA

Coding sequence (CDS)

ATGGCGGATTCGTTGGACGAAGACTGTGATTATCTCTTCAAGGCGGTTCTTACGGGCGATTCCGGCGTTGGAAAATCCAATCTCCTCTCTCGTTTCTCCAAAAATGAATTCCGATTCGACTCTAGACCTACGATCGGTGTCGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAACTCGTCAAAACCCAAATCTGGGACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGGGGAGCATTAGGAGCATTACTTGTTTACGACATAACTCGCGTGGCTACATTTGATAACATAAAGAAGTGGCTACGAGAGTTGAGAGAGTTTGGAAATCCGGAAATGGTGATCATTCTAGTTGGAAACAAATGCGACTTACATCAATCGCGAGAAGTACAAGAAGAAGAAGCGCGACATTTGGCCGAGTTGGAGAACTTGTTTTTCATGGAAACTTCTGCCAAAGATAATTTGAATGTGGAAGAGGCATTTCTTGAAATGGTTCGTAGGATCCACGCCATCGCCTCTCAAAAGACATTGGATTTGCATAAAAAATTTGAAAAGCTTGTTGCTTTTCCAAACGGAAAAGAGATTATTAGTATTCATGAAGTAACCCCAACCAAACACAATTCAAATTGTTGCTCTTTGTGA

Protein sequence

MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL

Homology

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BLAST of CsaV3_1G004280 vs. NCBI nr
Match: XP_004137339.1 (PREDICTED: ras-related protein RABA6a-like [Cucumis sativus] >KGN63869.1 hypothetical protein Csa_1G025010 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 3.0e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 219
           TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

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BLAST of CsaV3_1G004280 vs. NCBI nr
Match: XP_008453474.1 (PREDICTED: ras-related protein RABA6a-like [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 5.0e-115
Identity = 210/217 (96.77%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADSLDE+CDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNP+MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNKCDLHQSREVQEEEARHLAELENL FMETSAKDNLNVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
           TLDLHKK  KLV FPNGKEIISIHEVTPTK NSNCCS
Sbjct: 181 TLDLHKKIVKLVDFPNGKEIISIHEVTPTKSNSNCCS 217

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BLAST of CsaV3_1G004280 vs. NCBI nr
Match: CAG25544.1 (putative Ras-related GTP-binding protein, partial [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 1.1e-109
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 16  VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 75
           VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR
Sbjct: 1   VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60

Query: 76  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 135
           AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV
Sbjct: 61  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120

Query: 136 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 195
           QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180

Query: 196 NGKEIISIHEVTPTKHNSNCCSL 219
           NGKEIISIHEVTPTK NSNCCSL
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCSL 203

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BLAST of CsaV3_1G004280 vs. NCBI nr
Match: XP_023003771.1 (ras-related protein RABA6a-like [Cucurbita maxima])

HSP 1 Score: 375.6 bits (963), Expect = 1.2e-100
Identity = 183/218 (83.94%), Postives = 201/218 (92.20%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITR ATF+N+KKWLRELR+FGN +MVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAATFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL+ SREV+EEE R LAE E+LFFMETSA DN+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLNHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 219
           +L+L K+ EK VAFPNG EI+SIHEVTPTK NS CCSL
Sbjct: 181 SLNLPKRIEKFVAFPNGNEIVSIHEVTPTKPNSYCCSL 218

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BLAST of CsaV3_1G004280 vs. NCBI nr
Match: XP_023529393.1 (ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.4 bits (960), Expect = 2.6e-100
Identity = 183/218 (83.94%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVLTGDSGVGKSNLLSRF++ EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +KTQIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF+N+KKWLRELR+FGN +MVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           +LVGNK DL  SREV+EEE R LAE E+LFFMETSA DN+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 219
           +L+L K+ EKLVAFPNGKEI+SIHEVTPTK NS CC L
Sbjct: 181 SLNLPKRIEKLVAFPNGKEIVSIHEVTPTKPNSYCCYL 218

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BLAST of CsaV3_1G004280 vs. TAIR10
Match: AT1G73640.1 (RAB GTPase homolog A6A)

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-81
Identity = 149/228 (65.35%), Postives = 177/228 (77.63%), Query Frame = 0


Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           D+ +E+CDYLFKAVL GDS VGKSNLLSRFSK+EFRFDS+PTIGVEFAYRN+ V DK++K
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TFDNIKKWL ELR+F NPE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+E+E + LAE E L+F+ETSA +N+NVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 DLHKKFEKL----------VAFPNGKEIISIHEVTPTK----HNSNCC 217
             +K                  P GKEI++IHEVT T+     +SNCC
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231

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BLAST of CsaV3_1G004280 vs. TAIR10
Match: AT1G18200.1 (RAB GTPase homolog A6B)

HSP 1 Score: 288.9 bits (738), Expect = 2.6e-78
Identity = 147/225 (65.33%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           +S DE+CDYLFKAVL GDS VGKSNLLSRFS++EFR DS+PTIGV+FAYRN++V DK +K
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF NI+KWL ELR F +PE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+EEE + LAE E L+F+ETSA +N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 -------DLHKKFEKLVAFPNGKEIISIHEVTPTK----HNSNCC 217
                  D + +    V  P GKEI++IHEVT T+      SNCC
Sbjct: 184 LDNRLNGDGNNESNGAVV-PPGKEIVNIHEVTATRPLSTSLSNCC 227

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BLAST of CsaV3_1G004280 vs. TAIR10
Match: AT2G33870.1 (RAB GTPase homolog A1H)

HSP 1 Score: 241.9 bits (616), Expect = 3.7e-64
Identity = 120/213 (56.34%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           ++D DYLFK VLTGDSGVGKSNLLSRF++N+F  DSR TIGVEFA R+I+V DK+VK QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR  TF+N+++WL+ELR+  +   VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL+  R +  EE +  AE EN FFMETSA + +NVE AF E++ +I+ + S+K LD  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +       S CC+
Sbjct: 187 D--DPTTALPKGQMINVGSRDDVSAVKKSGCCA 217

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BLAST of CsaV3_1G004280 vs. TAIR10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-63
Identity = 121/212 (57.08%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           DE+ DYLFK VL GDSGVGKSNLLSRF+KNEF  +S+ TIGVEFA +  KV  K+VK QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATF+N  +WLRELR   +P +V++L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           KCDL     V+ EEA+  AE E+L+FMETSA D  NVE AF E++ +IH I S++++D  
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186

Query: 186 KKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
            +   L   P   E I++ E         CCS
Sbjct: 187 GESADL---PGKGETINVKEDGSVLKRMGCCS 215

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BLAST of CsaV3_1G004280 vs. TAIR10
Match: AT5G60860.1 (RAB GTPase homolog A1F)

HSP 1 Score: 237.3 bits (604), Expect = 9.1e-63
Identity = 118/213 (55.40%), Postives = 155/213 (72.77%), Query Frame = 0


Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           D++ DYLFK VL GDSGVGKSNLLSRF++NEF  +S+ TIGVEFA R+I V DK+VK QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR  TF+N+++WL+ELR+  +  +VI+ VGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL   R V  E+A+  AE EN FFMETSA +++NVE AF E++ +I+ + S+K LD+ 
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG 186

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +         CCS
Sbjct: 187 ---DDPAALPKGQTINVGSKDDVSAVKKVGCCS 216

[Close]

BLAST of CsaV3_1G004280 vs. Swiss-Prot
Match: sp|Q9C9U7|RAA6A_ARATH (Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-80
Identity = 149/228 (65.35%), Postives = 177/228 (77.63%), Query Frame = 0


Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           D+ +E+CDYLFKAVL GDS VGKSNLLSRFSK+EFRFDS+PTIGVEFAYRN+ V DK++K
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TFDNIKKWL ELR+F NPE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+E+E + LAE E L+F+ETSA +N+NVEEAFL M+ RIH + +Q+  
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIA 183

Query: 183 DLHKKFEKL----------VAFPNGKEIISIHEVTPTK----HNSNCC 217
             +K                  P GKEI++IHEVT T+     +SNCC
Sbjct: 184 SENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231

[Close]

BLAST of CsaV3_1G004280 vs. Swiss-Prot
Match: sp|Q0WQN4|RAA6B_ARATH (Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2)

HSP 1 Score: 288.9 bits (738), Expect = 4.8e-77
Identity = 147/225 (65.33%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 3   DSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVK 62
           +S DE+CDYLFKAVL GDS VGKSNLLSRFS++EFR DS+PTIGV+FAYRN++V DK +K
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIIL 122
            QIWDTAGQERFRAITSSYYRGALGALL+YDITR  TF NI+KWL ELR F +PE V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 VGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTL 182
           VGNK DL QSREV+EEE + LAE E L+F+ETSA +N NVEEAFL M+ RIH + +QK +
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 -------DLHKKFEKLVAFPNGKEIISIHEVTPTK----HNSNCC 217
                  D + +    V  P GKEI++IHEVT T+      SNCC
Sbjct: 184 LDNRLNGDGNNESNGAVV-PPGKEIVNIHEVTATRPLSTSLSNCC 227

[Close]

BLAST of CsaV3_1G004280 vs. Swiss-Prot
Match: sp|Q1PEX3|RAA1H_ARATH (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.7e-63
Identity = 120/213 (56.34%), Postives = 156/213 (73.24%), Query Frame = 0


Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           ++D DYLFK VLTGDSGVGKSNLLSRF++N+F  DSR TIGVEFA R+I+V DK+VK QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALLVYD+TR  TF+N+++WL+ELR+  +   VI+LVGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL+  R +  EE +  AE EN FFMETSA + +NVE AF E++ +I+ + S+K LD  
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 186

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +       S CC+
Sbjct: 187 D--DPTTALPKGQMINVGSRDDVSAVKKSGCCA 217

[Close]

BLAST of CsaV3_1G004280 vs. Swiss-Prot
Match: sp|P28185|RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.3e-62
Identity = 121/212 (57.08%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           DE+ DYLFK VL GDSGVGKSNLLSRF+KNEF  +S+ TIGVEFA +  KV  K+VK QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GALL+YD+TR ATF+N  +WLRELR   +P +V++L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           KCDL     V+ EEA+  AE E+L+FMETSA D  NVE AF E++ +IH I S++++D  
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186

Query: 186 KKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
            +   L   P   E I++ E         CCS
Sbjct: 187 GESADL---PGKGETINVKEDGSVLKRMGCCS 215

[Close]

BLAST of CsaV3_1G004280 vs. Swiss-Prot
Match: sp|Q40521|RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-62
Identity = 121/213 (56.81%), Postives = 158/213 (74.18%), Query Frame = 0


Query: 6   DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
           ++D DYLFK VL GDSGVGKSNLLSRFS+NEF  +S+ TIGVEFA R+I+V DK+VK QI
Sbjct: 8   EDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQI 67

Query: 66  WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
           WDTAGQER+RAITS+YYRGA+GAL+VYDITR  TF+N+++WL+ELR+  +  +VI+LVGN
Sbjct: 68  WDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGN 127

Query: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
           K DL   R V  E+A+  AE EN FFMETSA ++LNVE AF E++  I+ +  +K L++ 
Sbjct: 128 KADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVG 187

Query: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 218
              +   A P G+ I +   +V+  K    CCS
Sbjct: 188 ---DDPAALPKGQTINVGKDDVSAVK-KVGCCS 216

[Close]

BLAST of CsaV3_1G004280 vs. TrEMBL
Match: tr|A0A0A0LS89|A0A0A0LS89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 2.0e-120
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 219
           TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCSL 218

[Close]

BLAST of CsaV3_1G004280 vs. TrEMBL
Match: tr|A0A1S3BWB9|A0A1S3BWB9_CUCME (ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115
Identity = 210/217 (96.77%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADSLDE+CDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNP+MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNKCDLHQSREVQEEEARHLAELENL FMETSAKDNLNVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
           TLDLHKK  KLV FPNGKEIISIHEVTPTK NSNCCS
Sbjct: 181 TLDLHKKIVKLVDFPNGKEIISIHEVTPTKSNSNCCS 217

[Close]

BLAST of CsaV3_1G004280 vs. TrEMBL
Match: tr|Q6ZYK8|Q6ZYK8_CUCSA (Putative Ras-related GTP-binding protein (Fragment) OS=Cucumis sativus OX=3659 GN=rasgbp PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 7.1e-110
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0


Query: 16  VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 75
           VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR
Sbjct: 1   VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60

Query: 76  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 135
           AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV
Sbjct: 61  AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120

Query: 136 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 195
           QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180

Query: 196 NGKEIISIHEVTPTKHNSNCCSL 219
           NGKEIISIHEVTPTK NSNCCSL
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCSL 203

[Close]

BLAST of CsaV3_1G004280 vs. TrEMBL
Match: tr|A0A2P4J2J6|A0A2P4J2J6_QUESU (Ras-related protein raba6b OS=Quercus suber OX=58331 GN=CFP56_26564 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 8.7e-84
Identity = 160/217 (73.73%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MA+S DE+CDYLFKAVL GDSGVGKSNLLSRF+K+EFR DS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MAESFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +K QIWDTAGQERFRAITSSYYRGALGALLVYDITR ATF+N+KKW+RELR+FG+ +MV+
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENVKKWVRELRQFGSADMVV 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
           ILVGNK DL  SREV EEE ++LAE E L FMETSA +N NV+E+FL+M+ +IH I SQK
Sbjct: 121 ILVGNKSDLSHSREVNEEEGKNLAEAEGLCFMETSALENKNVQESFLQMITKIHEITSQK 180

Query: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 218
           +L+  K FE       GKEIISI EVT TK  S CCS
Sbjct: 181 SLEA-KTFETSTTLGRGKEIISIDEVTATKQTS-CCS 215

[Close]

BLAST of CsaV3_1G004280 vs. TrEMBL
Match: tr|A0A0B0MUD4|A0A0B0MUD4_GOSAR (Ras-related RABA6b-like protein OS=Gossypium arboreum OX=29729 GN=F383_27648 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.5e-83
Identity = 157/217 (72.35%), Postives = 181/217 (83.41%), Query Frame = 0


Query: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
           MADS DE+CDYLFKAVL GDS VGKSNLLSRF+K+EFR DS+PTIGVEFAYRN+K+ DK+
Sbjct: 1   MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNVKIGDKV 60

Query: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
           +K QIWDTAGQERFRAITSSYYRGALGALLVYDITR  TF N+KKW+ ELREFGN EMVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRTTFQNVKKWMHELREFGNLEMVI 120

Query: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIH-AIASQ 180
           +LVGNK DL +SR+V EEE + +AE+E LFFMETSA  NLNVEEAFL M+ +IH    SQ
Sbjct: 121 VLVGNKSDLSESRQVSEEEGKKIAEMEGLFFMETSALRNLNVEEAFLRMINKIHETTMSQ 180

Query: 181 KTLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCC 217
           K LD++ K   +V    GKEII+I EVT TKH++NCC
Sbjct: 181 KCLDVNMKESNVVG--AGKEIITIDEVTATKHSNNCC 215

The following BLAST results are available for this feature:

BLAST of CsaV3_1G004280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137339.1	3.0e-120	100.00	PREDICTED: ras-related protein RABA6a-like [Cucumis sativus] >KGN63869.1 hypothe...	[more]
XP_008453474.1	5.0e-115	96.77	PREDICTED: ras-related protein RABA6a-like [Cucumis melo]	[more]
CAG25544.1	1.1e-109	99.51	putative Ras-related GTP-binding protein, partial [Cucumis sativus]	[more]
XP_023003771.1	1.2e-100	83.94	ras-related protein RABA6a-like [Cucurbita maxima]	[more]
XP_023529393.1	2.6e-100	83.94	ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G004280 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73640.1	1.5e-81	65.35	RAB GTPase homolog A6A	[more]
AT1G18200.1	2.6e-78	65.33	RAB GTPase homolog A6B	[more]
AT2G33870.1	3.7e-64	56.34	RAB GTPase homolog A1H	[more]
AT1G06400.1	2.4e-63	57.08	Ras-related small GTP-binding family protein	[more]
AT5G60860.1	9.1e-63	55.40	RAB GTPase homolog A1F	[more]

BLAST of CsaV3_1G004280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9U7\|RAA6A_ARATH	2.7e-80	65.35	Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1	[more]
sp\|Q0WQN4\|RAA6B_ARATH	4.8e-77	65.33	Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2	[more]
sp\|Q1PEX3\|RAA1H_ARATH	6.7e-63	56.34	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]
sp\|P28185\|RAA1A_ARATH	4.3e-62	57.08	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]
sp\|Q40521\|RB11B_TOBAC	9.7e-62	56.81	Ras-related protein Rab11B OS=Nicotiana tabacum OX=4097 GN=RAB11B PE=2 SV=1	[more]

BLAST of CsaV3_1G004280 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LS89\|A0A0A0LS89_CUCSA	2.0e-120	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1	[more]
tr\|A0A1S3BWB9\|A0A1S3BWB9_CUCME	3.3e-115	96.77	ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=...	[more]
tr\|Q6ZYK8\|Q6ZYK8_CUCSA	7.1e-110	99.51	Putative Ras-related GTP-binding protein (Fragment) OS=Cucumis sativus OX=3659 G...	[more]
tr\|A0A2P4J2J6\|A0A2P4J2J6_QUESU	8.7e-84	73.73	Ras-related protein raba6b OS=Quercus suber OX=58331 GN=CFP56_26564 PE=4 SV=1	[more]
tr\|A0A0B0MUD4\|A0A0B0MUD4_GOSAR	1.5e-83	72.35	Ras-related RABA6b-like protein OS=Gossypium arboreum OX=29729 GN=F383_27648 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0045491	xylan metabolic process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G004280.1	CsaV3_1G004280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 36..52 score: 33.84 coord: 151..173 score: 46.78 coord: 54..76 score: 50.35 coord: 13..34 score: 51.86 coord: 116..129 score: 53.85
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 2.2E-28 score: 110.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 2.4E-100 score: 349.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..215 e-value: 1.7E-7 score: 40.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..176 e-value: 5.9E-11 score: 20.9
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 6..216 e-value: 1.6E-65 score: 222.2
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 5..217
None	No IPR available	PANTHER	PTHR24073:SF872	RAS-RELATED PROTEIN RABA1E	coord: 5..217
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..216 score: 34.148
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 4.06035E-104 score: 299.86
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..167 e-value: 8.9E-33 score: 111.3
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..174 e-value: 3.0E-59 score: 199.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..189

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G004280	CSPI01G04280	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G004280	Cucsa.111500	Cucumber (Gy14) v1	cgycucB143
CsaV3_1G004280	CmoCh11G003130	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G004280	Cp4.1LG04g13580	Cucurbita pepo (Zucchini)	cpecucB0815
CsaV3_1G004280	CsGy1G004170	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G004280	Carg09106	Silver-seed gourd	carcucB0629
CsaV3_1G004280	Cla018930	Watermelon (97103) v1	cucwmB106
CsaV3_1G004280	MELO3C017352	Melon (DHL92) v3.5.1	cucmeB055
CsaV3_1G004280	ClCG06G014380	Watermelon (Charleston Gray)	cucwcgB089
CsaV3_1G004280	Lsi06G012910	Bottle gourd (USVL1VR-Ls)	cuclsiB082
CsaV3_1G004280	MELO3C017352.2	Melon (DHL92) v3.6.1	cucmedB051
CsaV3_1G004280	Cla97C06G123840	Watermelon (97103) v2	cucwmbB077
CsaV3_1G004280	Bhi02G000095	Wax gourd	cucwgoB085

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G004280	Cucumber (Chinese Long) v3	cuccucB000
CsaV3_1G004280	Silver-seed gourd	carcucB0419
CsaV3_1G004280	Silver-seed gourd	carcucB0824
CsaV3_1G004280	Cucumber (Gy14) v2	cgybcucB003
CsaV3_1G004280	Cucumber (Gy14) v1	cgycucB164
CsaV3_1G004280	Cucurbita maxima (Rimu)	cmacucB0060
CsaV3_1G004280	Cucurbita maxima (Rimu)	cmacucB0101
CsaV3_1G004280	Cucurbita maxima (Rimu)	cmacucB0252
CsaV3_1G004280	Cucurbita maxima (Rimu)	cmacucB0466
CsaV3_1G004280	Cucurbita moschata (Rifu)	cmocucB0046
CsaV3_1G004280	Cucurbita moschata (Rifu)	cmocucB0238
CsaV3_1G004280	Cucurbita pepo (Zucchini)	cpecucB0033
CsaV3_1G004280	Cucurbita pepo (Zucchini)	cpecucB0444
CsaV3_1G004280	Cucurbita pepo (Zucchini)	cpecucB0627
CsaV3_1G004280	Wild cucumber (PI 183967)	cpicucB002
CsaV3_1G004280	Bottle gourd (USVL1VR-Ls)	cuclsiB024
CsaV3_1G004280	Melon (DHL92) v3.5.1	cucmeB026
CsaV3_1G004280	Melon (DHL92) v3.6.1	cucmedB024
CsaV3_1G004280	Watermelon (Charleston Gray)	cucwcgB064
CsaV3_1G004280	Watermelon (97103) v1	cucwmB071
CsaV3_1G004280	Watermelon (97103) v2	cucwmbB055
CsaV3_1G004280	Wax gourd	cucwgoB042