Csa1G003480 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATAATTTAATGGGGCGGTGGCTACCAATTCTGGGGTTGTTGGCGGTGGCCGTAGTGGTATTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCATTCGCTGGAAACCGACGGCGAGTTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGCTTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAA ATGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATAATTTAATGGGGCGGTGGCTACCAATTCTGGGGTTGTTGGCGGTGGCCGTAGTGGTATTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCATTCGCTGGAAACCGACGGCGAGTTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGCTTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAA ATGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATAATTTAATGGGGCGGTGGCTACCAATTCTGGGGTTGTTGGCGGTGGCCGTAGTGGTATTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCATTCGCTGGAAACCGACGGCGAGTTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGCTTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAA MATATSAIFVLLSGLCFLVFNSDNLMGRWLPILGLLAVAVVVLMAARATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFLAVLRSTEIDLLSSFSA*
BLAST of Csa1G003480 vs. TrEMBL
Match: A0A0A0LNT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003480 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.8e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Csa1G003480 vs. TrEMBL
Match: A0A0A0LRZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003500 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 3.4e-55 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 1
BLAST of Csa1G003480 vs. TrEMBL
Match: M5VW42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026311mg PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.4e-23 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 1
BLAST of Csa1G003480 vs. TrEMBL
Match: A0A0J8CFD2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118220 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.3e-17 Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 1
BLAST of Csa1G003480 vs. TrEMBL
Match: A0A0K9R4B8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113590 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 1
BLAST of Csa1G003480 vs. TAIR10
Match: AT5G50175.1 (AT5G50175.1 unknown protein) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 1
BLAST of Csa1G003480 vs. TAIR10
Match: AT4G03600.1 (AT4G03600.1 unknown protein) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 1
BLAST of Csa1G003480 vs. TAIR10
Match: AT1G03730.1 (AT1G03730.1 unknown protein) HSP 1 Score: 60.5 bits (145), Expect = 8.7e-10 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 1
BLAST of Csa1G003480 vs. TAIR10
Match: AT4G28330.1 (AT4G28330.1 unknown protein) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09 Identity = 28/76 (36.84%), Postives = 49/76 (64.47%), Query Frame = 1
BLAST of Csa1G003480 vs. TAIR10
Match: AT4G28340.1 (AT4G28340.1 unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08 Identity = 26/76 (34.21%), Postives = 47/76 (61.84%), Query Frame = 1
BLAST of Csa1G003480 vs. NCBI nr
Match: gi|700208434|gb|KGN63530.1| (hypothetical protein Csa_1G003480 [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 4.0e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Csa1G003480 vs. NCBI nr
Match: gi|700208436|gb|KGN63532.1| (hypothetical protein Csa_1G003500 [Cucumis sativus]) HSP 1 Score: 222.2 bits (565), Expect = 4.9e-55 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 1
BLAST of Csa1G003480 vs. NCBI nr
Match: gi|659129057|ref|XP_008464506.1| (PREDICTED: uncharacterized protein LOC103502369 [Cucumis melo]) HSP 1 Score: 213.8 bits (543), Expect = 1.7e-52 Identity = 114/122 (93.44%), Postives = 118/122 (96.72%), Query Frame = 1
BLAST of Csa1G003480 vs. NCBI nr
Match: gi|595792421|ref|XP_007199959.1| (hypothetical protein PRUPE_ppa026311mg [Prunus persica]) HSP 1 Score: 115.9 bits (289), Expect = 4.9e-23 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 1
BLAST of Csa1G003480 vs. NCBI nr
Match: gi|645264763|ref|XP_008237833.1| (PREDICTED: uncharacterized protein LOC103336555 [Prunus mume]) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22 Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |