CU086925 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU086925
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 580767 .. 586768 (-)
Sequence length244
The following sequences are available for this feature:

transcribed_cluster sequence

GAAAAGAAGAAGTTAAGCGGAGAAAGAAGAAAGAAGATCGATCTCCGTGGAACGAAGGACGGCGAGGAAGCTGAAGAGGGCGGCGAAAGCAACAGCAAGAAGACCTCTTTCTTTAACGATTACGGAGGCCAAGTACATGGCTACATCGGCGGTGATCTTTCTCCCATCTTTGACCAGAACTCGCCGTCAGTTCCCGGCGAACGCCAATAGCACCAACACCGTAATCCACGCCACCATCGTGGCT
BLAST of CU086925 vs. TrEMBL
Match: A0A0A0LNT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003480 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-16
Identity = 52/69 (75.36%), Postives = 52/69 (75.36%), Query Frame = -2

Query: 37  ATMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERGXXXXXXXXXXXXX 96
           ATMVAWITVLVLLAFAGN RRVLVKDGRKITADVAMYLASVIVKERG             
Sbjct: 48  ATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL 107

Query: 97  XXXRSTEID 156
              RSTEID
Sbjct: 108 AVLRSTEID 116

Query: 157 216
           
Sbjct: 168 116

Query: 217 244
           
Sbjct: 228 116

BLAST of CU086925 vs. TrEMBL
Match: A0A0A0LRZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003500 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.7e-16
Identity = 51/68 (75.00%), Postives = 51/68 (75.00%), Query Frame = -2

Query: 40  ATMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERGXXXXXXXXXXXXX 99
           ATMVAWITVLVLLAFAGN RRVLVKDGRKITADVAMYLASVIVKERG             
Sbjct: 53  ATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL 112

Query: 100 XXXRSTEI 159
              RSTEI
Sbjct: 113 AVLRSTEI 120

Query: 160 219
           
Sbjct: 173 120

Query: 220 244
           
Sbjct: 233 120

BLAST of CU086925 vs. TrEMBL
Match: W9S826_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002064 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 6.3e-10
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = -2

Query: 103 MVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERG 162
           MV WITVLVLLAFAGN RRVLVK GR+IT DVAM+L  V+VKERG
Sbjct: 1   MVTWITVLVLLAFAGNRRRVLVKRGRRITNDVAMFLVGVLVKERG 45

Query: 163 222
           
Sbjct: 61  45

Query: 223 238
           
Sbjct: 121 45

BLAST of CU086925 vs. TrEMBL
Match: A0A068UYP2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037351001 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.3e-10
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = -2

Query: 103 TMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERG 162
           T+V WIT+LVLLAFAGN RRVLVK GR+IT DVAM+LA V+ KERG
Sbjct: 63  TIVTWITLLVLLAFAGNRRRVLVKKGRRITLDVAMHLAMVVAKERG 108

Query: 163 222
           
Sbjct: 123 108

Query: 223 241
           
Sbjct: 183 108

BLAST of CU086925 vs. TrEMBL
Match: M5VW42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026311mg PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-09
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = -2

Query: 103 TMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERG 162
           TM+AWITVLVLL FAGN RRVLV+ G+ ITADVA+YL  VI+KERG
Sbjct: 56  TMMAWITVLVLLTFAGNRRRVLVRRGKLITADVAIYLFQVIMKERG 101

Query: 163 222
           
Sbjct: 116 101

Query: 223 241
           
Sbjct: 176 101

BLAST of CU086925 vs. NCBI nr
Match: gi|700208434|gb|KGN63530.1| (hypothetical protein Csa_1G003480 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 2.9e-16
Identity = 52/69 (75.36%), Postives = 52/69 (75.36%), Query Frame = -2

Query: 37  ATMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERGXXXXXXXXXXXXX 96
           ATMVAWITVLVLLAFAGN RRVLVKDGRKITADVAMYLASVIVKERG             
Sbjct: 48  ATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL 107

Query: 97  XXXRSTEID 156
              RSTEID
Sbjct: 108 AVLRSTEID 116

Query: 157 216
           
Sbjct: 168 116

Query: 217 244
           
Sbjct: 228 116

BLAST of CU086925 vs. NCBI nr
Match: gi|700208436|gb|KGN63532.1| (hypothetical protein Csa_1G003500 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-15
Identity = 51/68 (75.00%), Postives = 51/68 (75.00%), Query Frame = -2

Query: 40  ATMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERGXXXXXXXXXXXXX 99
           ATMVAWITVLVLLAFAGN RRVLVKDGRKITADVAMYLASVIVKERG             
Sbjct: 53  ATMVAWITVLVLLAFAGNRRRVLVKDGRKITADVAMYLASVIVKERGLLAVAFAALFSFL 112

Query: 100 XXXRSTEI 159
              RSTEI
Sbjct: 113 AVLRSTEI 120

Query: 160 219
           
Sbjct: 173 120

Query: 220 244
           
Sbjct: 233 120

BLAST of CU086925 vs. NCBI nr
Match: gi|659129057|ref|XP_008464506.1| (PREDICTED: uncharacterized protein LOC103502369 [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-15
Identity = 50/69 (72.46%), Postives = 51/69 (73.91%), Query Frame = -2

Query: 37  ATMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERGXXXXXXXXXXXXX 96
           ATMVAWITVLVLLAFAGN RRVLVK GRKITADVAMYLASV+VKERG             
Sbjct: 59  ATMVAWITVLVLLAFAGNRRRVLVKHGRKITADVAMYLASVMVKERGLLAVAFAALFSFV 118

Query: 97  XXXRSTEID 156
              RSTEID
Sbjct: 119 AVARSTEID 127

Query: 157 216
           
Sbjct: 179 127

Query: 217 244
           
Sbjct: 239 127

BLAST of CU086925 vs. NCBI nr
Match: gi|645264763|ref|XP_008237833.1| (PREDICTED: uncharacterized protein LOC103336555 [Prunus mume])

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-09
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = -2

Query: 103 ATMVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERG 162
           ATM+AWITVLVLL FAGN RRVLV+ G+ ITADVA+YL  VI+KERG
Sbjct: 58  ATMMAWITVLVLLTFAGNHRRVLVRRGKLITADVAIYLFRVIIKERG 104

Query: 163 222
           
Sbjct: 118 104

Query: 223 244
           
Sbjct: 178 104

BLAST of CU086925 vs. NCBI nr
Match: gi|703122937|ref|XP_010102690.1| (hypothetical protein L484_002064 [Morus notabilis])

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-09
Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = -2

Query: 103 MVAWITVLVLLAFAGN*RRVLVKDGRKITADVAMYLASVIVKERG 162
           MV WITVLVLLAFAGN RRVLVK GR+IT DVAM+L  V+VKERG
Sbjct: 1   MVTWITVLVLLAFAGNRRRVLVKRGRRITNDVAMFLVGVLVKERG 45

Query: 163 222
           
Sbjct: 61  45

Query: 223 238
           
Sbjct: 121 45

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LNT4_CUCSA1.6e-1675.36Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003480 PE=4 SV=1[more]
A0A0A0LRZ2_CUCSA7.7e-1675.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003500 PE=4 SV=1[more]
W9S826_9ROSA6.3e-1080.00Uncharacterized protein OS=Morus notabilis GN=L484_002064 PE=4 SV=1[more]
A0A068UYP2_COFCA8.3e-1076.09Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037351001 PE=4 SV=1[more]
M5VW42_PRUPE2.4e-0976.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026311mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208434|gb|KGN63530.1|2.9e-1675.36hypothetical protein Csa_1G003480 [Cucumis sativus][more]
gi|700208436|gb|KGN63532.1|1.4e-1575.00hypothetical protein Csa_1G003500 [Cucumis sativus][more]
gi|659129057|ref|XP_008464506.1|4.2e-1572.46PREDICTED: uncharacterized protein LOC103502369 [Cucumis melo][more]
gi|645264763|ref|XP_008237833.1|1.6e-0976.60PREDICTED: uncharacterized protein LOC103336555 [Prunus mume][more]
gi|703122937|ref|XP_010102690.1|1.6e-0980.00hypothetical protein L484_002064 [Morus notabilis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G003490Csa1G003490gene
Csa1G003500Csa1G003500gene
Csa1G003480Csa1G003480gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LY9Y8FKNP3UI02LY9Y8EST
G0132309G0132309EST