CmoCh11G000690 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGCGAGGTTAAACAACTTGATCTTCTTTATTGGATCCGATCGACTTACTTATTTTCCTATCATTTACCCATTTAAGTTGTATTATACTAGTTGGCAACACTAATTAATCACAATTAAATAAATATATGATTTCATTAATATAAAACTTTAGGACATAAAGAGAAAAAAAAAGGAATGAAATTTATATTAAAAATATATGGGCACATGCAGAGAGTAGTCCCTAAATTATGCAATTGGCAGTTGACTTACTACTTCAATCAAAGCTCATTATCAAGTACCAACCTTGTTATAAAACATCTTATATCCCTAATTTTAGGGATTTATATCAAATTTAATCATAAATTTTAATTTCGTCAAATTAAGTGTCTATTCAATTTTCACTAAATATTAGTTTTATAAGAATATTTTAAAGAAAAAAAAATGATTGCTGAAATAAAAATATCATATACTATAAATTGCAATATTTTATGAATTGAAGGCAGAAATTAGTTTTGTAGCTTGAAAAGATATATTGGCCCCCACATAATGAGGTCGAGCACCTCCCCATGTGCAGCACATGGCTGCCAATTCCTTTCCCAAACACCAATCTTGAACCAGCTTTGAAATAATCAATCAAAATCCAAGATTCAATTAATATCCATTTGAGTTGTCATAATAATTCATATATAAAAACAAATAACAAACGGAAAGTTTGCATAAAAAGCACATACTCTCGTCAGATTGCTCTGTAACGCAAAGCGCAGAAGAATGTCGACTCCGGTGACGGAGGCCGTTTTGCTGTCGGGGATATTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTCTTAATTTTGATTTGATGGGGCGATGGGTTCCAATTGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCCGGAAACCGACGGCGGGTTTTGGTGAAACAGGGAAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGGTTTCGCCGCCGTCCTCAGCCTCGTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA ATGTCGCGAGGTTCGTGTATTGTCGTTCTTAATTTTGATTTGATGGGGCGATGGGTTCCAATTGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCCGGAAACCGACGGCGGGTTTTGGTGAAACAGGGAAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGGTTTCGCCGCCGTCCTCAGCCTCGTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA ATGTCGCGAGGTTCGTGTATTGTCGTTCTTAATTTTGATTTGATGGGGCGATGGGTTCCAATTGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCCGGAAACCGACGGCGGGTTTTGGTGAAACAGGGAAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGGTTTCGCCGCCGTCCTCAGCCTCGTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA
BLAST of CmoCh11G000690 vs. TrEMBL
Match: A0A0A0LNT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003480 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.9e-29 Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 1
BLAST of CmoCh11G000690 vs. TrEMBL
Match: A0A0A0LRZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003500 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-28 Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 1
BLAST of CmoCh11G000690 vs. TrEMBL
Match: M5VW42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026311mg PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-16 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 1
BLAST of CmoCh11G000690 vs. TrEMBL
Match: W9S826_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002064 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 6.4e-13 Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 1
BLAST of CmoCh11G000690 vs. TrEMBL
Match: A0A103XWH6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_023599 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-11 Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 1
BLAST of CmoCh11G000690 vs. TAIR10
Match: AT5G50175.1 (AT5G50175.1 unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 3.2e-11 Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 1
BLAST of CmoCh11G000690 vs. TAIR10
Match: AT4G03600.1 (AT4G03600.1 unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 1
BLAST of CmoCh11G000690 vs. TAIR10
Match: AT1G03730.1 (AT1G03730.1 unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 5.2e-06 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 1
BLAST of CmoCh11G000690 vs. NCBI nr
Match: gi|659129057|ref|XP_008464506.1| (PREDICTED: uncharacterized protein LOC103502369 [Cucumis melo]) HSP 1 Score: 142.5 bits (358), Expect = 4.4e-31 Identity = 83/106 (78.30%), Postives = 92/106 (86.79%), Query Frame = 1
BLAST of CmoCh11G000690 vs. NCBI nr
Match: gi|700208434|gb|KGN63530.1| (hypothetical protein Csa_1G003480 [Cucumis sativus]) HSP 1 Score: 136.0 bits (341), Expect = 4.1e-29 Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 1
BLAST of CmoCh11G000690 vs. NCBI nr
Match: gi|700208436|gb|KGN63532.1| (hypothetical protein Csa_1G003500 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 1.6e-28 Identity = 79/106 (74.53%), Postives = 91/106 (85.85%), Query Frame = 1
BLAST of CmoCh11G000690 vs. NCBI nr
Match: gi|645264763|ref|XP_008237833.1| (PREDICTED: uncharacterized protein LOC103336555 [Prunus mume]) HSP 1 Score: 91.7 bits (226), Expect = 8.9e-16 Identity = 51/81 (62.96%), Postives = 69/81 (85.19%), Query Frame = 1
BLAST of CmoCh11G000690 vs. NCBI nr
Match: gi|595792421|ref|XP_007199959.1| (hypothetical protein PRUPE_ppa026311mg [Prunus persica]) HSP 1 Score: 91.7 bits (226), Expect = 8.9e-16 Identity = 52/81 (64.20%), Postives = 69/81 (85.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |