Carg20199 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACTCCGGTGACGGAGGCCGTTTTGCTGTCGGGGATATTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTCTTAATTTCGATTTGATGGGGCGATGGGTTCCAATTGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCTGGAAACCGACGGCGGGTTTTGGTGAAACAGGGGAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGCTTTCGCCGCCGTCCTCAGCTTCTTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA ATGTCGACTCCGGTGACGGAGGCCGTTTTGCTGTCGGGGATATTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTCTTAATTTCGATTTGATGGGGCGATGGGTTCCAATTGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCTGGAAACCGACGGCGGGTTTTGGTGAAACAGGGGAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGCTTTCGCCGCCGTCCTCAGCTTCTTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA ATGTCGACTCCGGTGACGGAGGCCGTTTTGCTGTCGGGGATATTTCTGTTGCTTTCAGGTTCGTGTATTGTCGTTCTTAATTTCGATTTGATGGGGCGATGGGTTCCAATTGTGGGGTTGTTAGTGGTTGCCGGAGTGGCGGTGGTGGCCGCGAGAGCCACCATGGTGGCGTGGATCACGGTGTTGGTGCTGTTGGCGTTCGCTGGAAACCGACGGCGGGTTTTGGTGAAACAGGGGAGACAGATCACCGCTGATGTAGCCATGTACTTGGGCGCCGTGTTGGTTAAAGAAAGAGGGCTTGTTGCTGTTGCTTTCGCCGCCGTCCTCAGCTTCTTCGCCGTGGTTCGGTCGATGGAGATCGATTCACTTTCTGTTTCTGTTTAA MSTPVTEAVLLSGIFLLLSGSCIVVLNFDLMGRWVPIVGLLVVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRQITADVAMYLGAVLVKERGLVAVAFAAVLSFFAVVRSMEIDSLSVSV
BLAST of Carg20199 vs. NCBI nr
Match: XP_023530771.1 (uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.5 bits (550), Expect = 5.3e-53 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Carg20199 vs. NCBI nr
Match: XP_022933693.1 (uncharacterized protein LOC111441029 [Cucurbita moschata]) HSP 1 Score: 212.6 bits (540), Expect = 7.7e-52 Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Carg20199 vs. NCBI nr
Match: XP_023004957.1 (uncharacterized protein LOC111498104 [Cucurbita maxima]) HSP 1 Score: 212.6 bits (540), Expect = 7.7e-52 Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Carg20199 vs. NCBI nr
Match: KGN63532.1 (hypothetical protein Csa_1G003500 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32 Identity = 92/125 (73.60%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of Carg20199 vs. NCBI nr
Match: KGN63530.1 (hypothetical protein Csa_1G003480 [Cucumis sativus]) HSP 1 Score: 147.9 bits (372), Expect = 2.3e-32 Identity = 88/118 (74.58%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of Carg20199 vs. TAIR10
Match: AT5G50175.1 (unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-11 Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of Carg20199 vs. TAIR10
Match: AT4G03600.1 (unknown protein) HSP 1 Score: 57.4 bits (137), Expect = 7.5e-09 Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of Carg20199 vs. TAIR10
Match: AT1G03730.1 (unknown protein) HSP 1 Score: 53.5 bits (127), Expect = 1.1e-07 Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0
BLAST of Carg20199 vs. TAIR10
Match: AT4G28330.1 (unknown protein) HSP 1 Score: 46.2 bits (108), Expect = 1.7e-05 Identity = 31/86 (36.05%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Carg20199 vs. TAIR10
Match: AT4G28340.1 (unknown protein) HSP 1 Score: 42.7 bits (99), Expect = 1.9e-04 Identity = 29/81 (35.80%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Carg20199 vs. TrEMBL
Match: tr|A0A0A0LRZ2|A0A0A0LRZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003500 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 9.0e-33 Identity = 92/125 (73.60%), Postives = 104/125 (83.20%), Query Frame = 0
BLAST of Carg20199 vs. TrEMBL
Match: tr|A0A0A0LNT4|A0A0A0LNT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003480 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.5e-32 Identity = 88/118 (74.58%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of Carg20199 vs. TrEMBL
Match: tr|A0A2N9H933|A0A2N9H933_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS36524 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.0e-17 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 0
BLAST of Carg20199 vs. TrEMBL
Match: tr|A0A2I4HAV9|A0A2I4HAV9_9ROSI (uncharacterized protein LOC109015267 OS=Juglans regia OX=51240 GN=LOC109015267 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-15 Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 0
BLAST of Carg20199 vs. TrEMBL
Match: tr|A0A2P4H3D9|A0A2P4H3D9_QUESU (Protein nbr1 like OS=Quercus suber OX=58331 GN=CFP56_16298 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.2e-14 Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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