CSPI01G00980 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGACACCCACGACGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATGATTTAATGGGGCGGTGGCTACCAATTCTGGGGTTGTTGGCGGTGGCCGTAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCGTTCGCTGGAAACCGACGGCGAGTTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGCTTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAACTTCTTCTTTTCTTTCCTTTTCCTTTTCCTTTTCCGGAGAGATGAAATTTGGGTGAATTTTACCGGTTTTGTAACGGTAAAAATTTATAATTAGGTTTTGGTTTCAAAACACTTACTTTAAAGTTTTAACATCAACACTCCGA ATGTTGACACCCACGACGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATGATTTAATGGGGCGGTGGCTACCAATTCTGGGGTTGTTGGCGGTGGCCGTAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCGTTCGCTGGAAACCGACGGCGAGTTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGCTTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAA ATGTTGACACCCACGACGGCGACGGCCACCTCCGCCATTTTTGTTCTGCTTTCAGGTTTGTGTTTTCTCGTTTTCAATTCCGATGATTTAATGGGGCGGTGGCTACCAATTCTGGGGTTGTTGGCGGTGGCCGTAGTGGCGTTGATGGCGGCCAGAGCCACGATGGTGGCGTGGATCACGGTGTTGGTGCTATTGGCGTTCGCTGGAAACCGACGGCGAGTTCTGGTCAAAGATGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCTCCGTAATCGTTAAAGAAAGAGGTCTTCTTGCTGTTGCTTTCGCCGCCCTCTTCAGCTTCCTCGCCGTCCTTCGTTCCACGGAGATCGATCTTCTTTCTTCTTTCTCCGCTTAA
BLAST of CSPI01G00980 vs. TrEMBL
Match: A0A0A0LRZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003500 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 3.0e-54 Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 1
BLAST of CSPI01G00980 vs. TrEMBL
Match: A0A0A0LNT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G003480 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 1.8e-51 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 1
BLAST of CSPI01G00980 vs. TrEMBL
Match: M5VW42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026311mg PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.0e-18 Identity = 64/116 (55.17%), Postives = 84/116 (72.41%), Query Frame = 1
BLAST of CSPI01G00980 vs. TrEMBL
Match: A0A0J8CFD2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118220 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.8e-14 Identity = 63/132 (47.73%), Postives = 82/132 (62.12%), Query Frame = 1
BLAST of CSPI01G00980 vs. TrEMBL
Match: W9S826_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002064 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.5e-13 Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 1
BLAST of CSPI01G00980 vs. TAIR10
Match: AT5G50175.1 (AT5G50175.1 unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 5.3e-10 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 1
BLAST of CSPI01G00980 vs. TAIR10
Match: AT4G03600.1 (AT4G03600.1 unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07 Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 1
BLAST of CSPI01G00980 vs. TAIR10
Match: AT1G03730.1 (AT1G03730.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 9.3e-07 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 1
BLAST of CSPI01G00980 vs. TAIR10
Match: AT4G28330.1 (AT4G28330.1 unknown protein) HSP 1 Score: 47.4 bits (111), Expect = 7.9e-06 Identity = 28/76 (36.84%), Postives = 50/76 (65.79%), Query Frame = 1
BLAST of CSPI01G00980 vs. NCBI nr
Match: gi|700208436|gb|KGN63532.1| (hypothetical protein Csa_1G003500 [Cucumis sativus]) HSP 1 Score: 219.2 bits (557), Expect = 4.3e-54 Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 1
BLAST of CSPI01G00980 vs. NCBI nr
Match: gi|700208434|gb|KGN63530.1| (hypothetical protein Csa_1G003480 [Cucumis sativus]) HSP 1 Score: 209.9 bits (533), Expect = 2.6e-51 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 1
BLAST of CSPI01G00980 vs. NCBI nr
Match: gi|659129057|ref|XP_008464506.1| (PREDICTED: uncharacterized protein LOC103502369 [Cucumis melo]) HSP 1 Score: 208.8 bits (530), Expect = 5.8e-51 Identity = 119/128 (92.97%), Postives = 124/128 (96.88%), Query Frame = 1
BLAST of CSPI01G00980 vs. NCBI nr
Match: gi|595792421|ref|XP_007199959.1| (hypothetical protein PRUPE_ppa026311mg [Prunus persica]) HSP 1 Score: 100.1 bits (248), Expect = 2.9e-18 Identity = 64/116 (55.17%), Postives = 84/116 (72.41%), Query Frame = 1
BLAST of CSPI01G00980 vs. NCBI nr
Match: gi|645264763|ref|XP_008237833.1| (PREDICTED: uncharacterized protein LOC103336555 [Prunus mume]) HSP 1 Score: 99.8 bits (247), Expect = 3.8e-18 Identity = 65/115 (56.52%), Postives = 81/115 (70.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |