CsGy7G015460 (gene) Cucumber (Gy14) v2

Overview
NameCsGy7G015460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr7 : 19408414 .. 19408874 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCATCAAATCCCTAATTTCCATATCTCTTCTCGCCCTTCTTTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCAATTGCCGCGGCGCTTCCAATTCTGTTACCGCAATGCTCCGCCGTAACATCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAAGGGAAGATGAATGTTCGTATCAAAAAAGGTGGACTGGGGCGGTTTCGACCTATAGGGGCTGGCACTGGAACTGGGACCCGTAGTTCAGCAGCGAATCGGAGCCGAGTCGATTCTTTTGGCCTCGGATTTCTCCTCTTCTTCTTCGGGTTGGTCTTGTAAAATCTGATTGATTTTGTTCGTTTCTGTAAAGAATAACTGAGATTTATTTGGGATTTTATTAATTCATTTCGTTCCTTCTTATTTGATGATGAAAGATTGATGTGTGTGTCACTGTGCTGTATATGTTTATCTAA

mRNA sequence

ATGGCTGCCATCAAATCCCTAATTTCCATATCTCTTCTCGCCCTTCTTTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCAATTGCCGCGGCGCTTCCAATTCTGTTACCGCAATGCTCCGCCGTAACATCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAAGGGAAGATGAATGTTCGTATCAAAAAAGGTGGACTGGGGCGGTTTCGACCTATAGGGGCTGGCACTGGAACTGGGACCCGTAGTTCAGCAGCGAATCGGAGCCGAGTCGATTCTTTTGGCCTCGGATTTCTCCTCTTCTTCTTCGGGTTGATTGATGTGTGTGTCACTGTGCTGTATATGTTTATCTAA

Coding sequence (CDS)

ATGGCTGCCATCAAATCCCTAATTTCCATATCTCTTCTCGCCCTTCTTTTCTTCTCCGAATCCCTATCCACTTCTGCCGCCAATTGCCGCGGCGCTTCCAATTCTGTTACCGCAATGCTCCGCCGTAACATCCTTCAGACGGCGACTCATGAAATTGCAGATTCGGAAGGGAAGATGAATGTTCGTATCAAAAAAGGTGGACTGGGGCGGTTTCGACCTATAGGGGCTGGCACTGGAACTGGGACCCGTAGTTCAGCAGCGAATCGGAGCCGAGTCGATTCTTTTGGCCTCGGATTTCTCCTCTTCTTCTTCGGGTTGATTGATGTGTGTGTCACTGTGCTGTATATGTTTATCTAA

Protein sequence

MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMNVRIKKGGLGRFRPIGAGTGTGTRSSAANRSRVDSFGLGFLLFFFGLIDVCVTVLYMFI
Homology
[Close]
BLAST of CsGy7G015460 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_7G394060 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60
           MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60

Query: 61  VRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLLFFFGLI 108
           VRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLLFFFGL+
Sbjct: 61  VRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLLFFFGLV 107

[Close]
BLAST of CsGy7G015460 vs. NCBI nr
Match: XP_008451651.1 (PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo])

HSP 1 Score: 53.5 bits (127), Expect = 5.6e-04
Identity = 44/101 (43.56%), Postives = 55/101 (54.46%), Query Frame = 0 

Query: 1  MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60
          MAAI+ L+SI+LLALLFFSESL T        S+S+T +  RNIL T  H I +   + +
Sbjct: 1  MAAIRPLVSIALLALLFFSESLLT--------SHSLTGIPHRNILHTVAHRIVNGSVESS 60

Query: 61 VRIKKGGL-----GRFRPI-GAXXXXXXXXSAANRSRVDSF 96
           + K   L      R RPI  +        SA NRSRV SF
Sbjct: 61 YQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASF 93

[Close]
BLAST of CsGy7G015460 vs. NCBI nr
Match: XP_008451666.1 (PREDICTED: protein no-on-transient A-like [Cucumis melo])

HSP 1 Score: 53.5 bits (127), Expect = 5.6e-04
Identity = 64/140 (45.71%), Postives = 69/140 (49.29%), Query Frame = 0 

Query: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGA-SNSVTAMLRRNILQTATHEIA------ 60
           MAAIK+ I ISLLALLFF E L       RGA SNSVT +L R ILQTA H+ A      
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  DSEGKM-NVRIKKG--------------------------GLGRFRPIGAXXXXXXXXSA 107
            SE KM NV +K G                                    XXXXXXXX  
Sbjct: 61  SSERKMNNVHMKIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

[Close]
BLAST of CsGy7G015460 vs. TrEMBL
Match: tr|A0A0A0KAQ7|A0A0A0KAQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60
           MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN
Sbjct: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60

Query: 61  VRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLLFFFGLI 108
           VRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLLFFFGL+
Sbjct: 61  VRIKKGGLGRFRPIGAXXXXXXXXSAANRSRVDSFGLGFLLFFFGLV 107

[Close]
BLAST of CsGy7G015460 vs. TrEMBL
Match: tr|A0A1S3BRF6|A0A1S3BRF6_CUCME (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-04
Identity = 64/140 (45.71%), Postives = 69/140 (49.29%), Query Frame = 0 

Query: 1   MAAIKSLISISLLALLFFSESLSTSAANCRGA-SNSVTAMLRRNILQTATHEIA------ 60
           MAAIK+ I ISLLALLFF E L       RGA SNSVT +L R ILQTA H+ A      
Sbjct: 1   MAAIKTTIFISLLALLFFYEYLYPLPPPVRGAHSNSVTGVLHRKILQTAAHKTAGDNVES 60

Query: 61  DSEGKM-NVRIKKG--------------------------GLGRFRPIGAXXXXXXXXSA 107
            SE KM NV +K G                                    XXXXXXXX  
Sbjct: 61  SSERKMNNVHMKIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

[Close]
BLAST of CsGy7G015460 vs. TrEMBL
Match: tr|A0A1S3BT53|A0A1S3BT53_CUCME (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-04
Identity = 44/101 (43.56%), Postives = 55/101 (54.46%), Query Frame = 0 

Query: 1  MAAIKSLISISLLALLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIADSEGKMN 60
          MAAI+ L+SI+LLALLFFSESL T        S+S+T +  RNIL T  H I +   + +
Sbjct: 1  MAAIRPLVSIALLALLFFSESLLT--------SHSLTGIPHRNILHTVAHRIVNGSVESS 60

Query: 61 VRIKKGGL-----GRFRPI-GAXXXXXXXXSAANRSRVDSF 96
           + K   L      R RPI  +        SA NRSRV SF
Sbjct: 61 YQRKSNKLHTKDRRRIRPILISGSNGMHHKSAENRSRVASF 93

The following BLAST results are available for this feature:
BLAST of CsGy7G015460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44886.12.0e-4199.07hypothetical protein Csa_7G394060 [Cucumis sativus][more]
XP_008451651.15.6e-0443.56PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo][more]
XP_008451666.15.6e-0445.71PREDICTED: protein no-on-transient A-like [Cucumis melo][more]
BLAST of CsGy7G015460 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy7G015460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy7G015460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KAQ7|A0A0A0KAQ7_CUCSA1.3e-4199.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1[more]
tr|A0A1S3BRF6|A0A1S3BRF6_CUCME3.7e-0445.71protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1[more]
tr|A0A1S3BT53|A0A1S3BT53_CUCME3.7e-0443.56E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 P... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G015460.1CsGy7G015460.1mRNA