CsGy7G009280 (gene) Cucumber (Gy14) v2

Overview
NameCsGy7G009280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Description60S ribosomal protein L27
LocationChr7 : 11656712 .. 11657324 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAATTCATCAAGCCCAACAAAGCTGTTATCGTTCTTCAAGGCCGATATGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTGATTCGCAAAGATTCAAAGAAAAAGACAGAAAAAAAATCGAGAGTGAAAGCATTCATCAAGCTTGAGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAGAGTGTCGAAGGTATCGGCGTCAAAGGAGATCAAAAAGAGATTGGAGAACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTCACCAAGCTTAGGTTCTGAGGGAATCATTTCAGGTGTTAGAGGTTTGTTTTTTCTTGATTCAAATTTGGAGAAACGATTTTGATTATGATGATGAATGAATTTGTTGATTTTCTTTTTAGCTCTAAATGGGGAGAAGGAGGAAGAATGTAATCCAATGATTTTGAGTCGCTCAATCTCATTTAATTTTCTCATATTTGGATACAGATTCAATACCGATTGTTGA

mRNA sequence

ATGGTGAAATTCATCAAGCCCAACAAAGCTGTTATCGTTCTTCAAGGCCGATATGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTGATTCGCAAAGATTCAAAGAAAAAGACAGAAAAAAAATCGAGAGTGAAAGCATTCATCAAGCTTGAGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAGAGTGTCGAAGGTATCGGCGTCAAAGGAGATCAAAAAGAGATTGGAGAACAGGTTTAAGACTGGGAAGAACAGATTCAATACCGATTGTTGA

Coding sequence (CDS)

ATGGTGAAATTCATCAAGCCCAACAAAGCTGTTATCGTTCTTCAAGGCCGATATGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTGATTCGCAAAGATTCAAAGAAAAAGACAGAAAAAAAATCGAGAGTGAAAGCATTCATCAAGCTTGAGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAGAGTGTCGAAGGTATCGGCGTCAAAGGAGATCAAAAAGAGATTGGAGAACAGGTTTAAGACTGGGAAGAACAGATTCAATACCGATTGTTGA

Protein sequence

MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENRFKTGKNRFNTDC
Homology
[Close]
BLAST of CsGy7G009280 vs. NCBI nr
Match: XP_011658974.1 (PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus] >KGN44160.1 hypothetical protein Csa_7G209560 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 1.7e-62
Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVVRKDSKK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT+KKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR
Sbjct: 61  KTDKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. NCBI nr
Match: XP_004145994.2 (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis sativus] >KGN54977.1 60S ribosomal protein L27 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60
Identity = 120/128 (93.75%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAV+VLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKK
Sbjct: 1   MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVVRKDSKK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT+KKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQS+VSKV+ASKEIKKRLE+R
Sbjct: 61  KTDKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. NCBI nr
Match: XP_008464678.1 (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 4.7e-60
Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT+KKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCLQS+VSKV+ASKEIKKRLE+R
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. NCBI nr
Match: XP_022940098.1 (60S ribosomal protein L27-3-like [Cucurbita moschata])

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58
Identity = 119/128 (92.97%), Postives = 125/128 (97.66%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGR+AGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS K
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCLQS+VSKV+ASKEIKKRLE+R
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. NCBI nr
Match: XP_022981139.1 (60S ribosomal protein L27-like [Cucurbita maxima])

HSP 1 Score: 229.9 bits (585), Expect = 4.8e-57
Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGR+AGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS K
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGMKKYPSKVIRKDSTK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVN DCLQS+ SKV+A+KEIKKRLE+R
Sbjct: 61  KTAKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNADCLQSKGSKVAAAKEIKKRLEDR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TAIR10
Match: AT4G15000.1 (Ribosomal L27e protein family)

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-51
Identity = 98/128 (76.56%), Postives = 113/128 (88.28%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGRYAG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVK FIKL NYQH+MPTRYTLDVDLK+V  +D LQS+  KV+A KE K +LE R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TAIR10
Match: AT3G22230.1 (Ribosomal L27e protein family)

HSP 1 Score: 194.1 bits (492), Expect = 5.3e-50
Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGRYAG+KAVI+++FD+GT DR YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVK FIKL NYQH+MPTRYTLDVDLK+V  +D L+S+  KV+A KE K +LE R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TAIR10
Match: AT2G32220.1 (Ribosomal L27e protein family)

HSP 1 Score: 181.8 bits (460), Expect = 2.7e-46
Identity = 89/128 (69.53%), Postives = 108/128 (84.38%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVK +KP KAVI+LQGRY G+KAVIV++FD+GT ++ YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVK F K+ NYQH+MPTRYTLD+DLK+VV+ D + S+  KV+A KE K + E R
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. Swiss-Prot
Match: sp|Q05462|RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-50
Identity = 99/128 (77.34%), Postives = 114/128 (89.06%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+KPNKAVI+LQGRYAG+KAVIV+ FD+GTR++PYGHCLVAG+KK+PSKVI+KDS K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVKAF+KL NYQH+MPTRYTLDVDLKD V  D LQS+  KV+A KE KK LE R
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. Swiss-Prot
Match: sp|P51419|RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 2.3e-50
Identity = 98/128 (76.56%), Postives = 113/128 (88.28%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGRYAG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVK FIKL NYQH+MPTRYTLDVDLK+V  +D LQS+  KV+A KE K +LE R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. Swiss-Prot
Match: sp|Q8LCL3|RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 9.6e-49
Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+K NKAVI+LQGRYAG+KAVI+++FD+GT DR YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVK FIKL NYQH+MPTRYTLDVDLK+V  +D L+S+  KV+A KE K +LE R
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. Swiss-Prot
Match: sp|P41101|RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.5e-46
Identity = 99/132 (75.00%), Postives = 108/132 (81.82%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           M KF+KPNKAVI+LQG+YAGRKAVIVR FDEGTRDRPYGHCLVAG+ +YP KVIRKDS K
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDL----KDVVNVDCLQSRVSKVSASKEIKKR 120
           K  KKSRVKAFIKL NY HIMPTRYTLD DL    KDVVN D LQ+R  KV+A +  K R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKAR 120

Query: 121 LENRFKTGKNRF 129
           L  RFKTGKNR+
Sbjct: 121 LAERFKTGKNRW 131

[Close]
BLAST of CsGy7G009280 vs. Swiss-Prot
Match: sp|Q9SKX8|RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-45
Identity = 89/128 (69.53%), Postives = 108/128 (84.38%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVK +KP KAVI+LQGRY G+KAVIV++FD+GT ++ YGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVK F K+ NYQH+MPTRYTLD+DLK+VV+ D + S+  KV+A KE K + E R
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TrEMBL
Match: tr|A0A0A0K3A4|A0A0A0K3A4_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_7G209560 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62
Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVVRKDSKK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT+KKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR
Sbjct: 61  KTDKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TrEMBL
Match: tr|A0A0A0L310|A0A0A0L310_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G618420 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 8.2e-61
Identity = 120/128 (93.75%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAV+VLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKK
Sbjct: 1   MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVVRKDSKK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT+KKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQS+VSKV+ASKEIKKRLE+R
Sbjct: 61  KTDKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TrEMBL
Match: tr|A0A1S3CNL3|A0A1S3CNL3_CUCME (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103502503 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.1e-60
Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKFIKPNKAVIVLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK
Sbjct: 1   MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT+KKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCLQS+VSKV+ASKEIKKRLE+R
Sbjct: 61  KTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TrEMBL
Match: tr|A0A2N9FTH9|A0A2N9FTH9_FAGSY (60S ribosomal protein L27 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21879 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.8e-53
Identity = 107/128 (83.59%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+KPNKAVI+LQGRYAGRKAVIVR FDEGTRDRPYGHCLVAG+ KYPSKVIRKDS K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGRKAVIVRAFDEGTRDRPYGHCLVAGISKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVKAF+KL N+QH+MPTRYTLDVDLKD V+VDCLQS+  KV+A+KE KKRLE+R
Sbjct: 61  KTAKKSRVKAFVKLVNFQHLMPTRYTLDVDLKDAVSVDCLQSKDKKVTAAKETKKRLEDR 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

[Close]
BLAST of CsGy7G009280 vs. TrEMBL
Match: tr|A0A2P4L2S1|A0A2P4L2S1_QUESU (60s ribosomal protein l27 OS=Quercus suber OX=58331 GN=CFP56_62577 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 1   MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKK 60
           MVKF+KPNKAVI+LQGRYAGRKAVIVR+FDEGTRDRPYGHCLVAG+KKYPSKVIRKDS K
Sbjct: 1   MVKFLKPNKAVILLQGRYAGRKAVIVRSFDEGTRDRPYGHCLVAGIKKYPSKVIRKDSAK 60

Query: 61  KTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENR 120
           KT KKSRVKAFIKL N+QH+MPTRYTLDVDLKDVV VD LQS+  KV+A+KE KK+LE R
Sbjct: 61  KTAKKSRVKAFIKLVNFQHLMPTRYTLDVDLKDVVAVDSLQSKDKKVTAAKETKKKLEER 120

Query: 121 FKTGKNRF 129
           FKTGKNR+
Sbjct: 121 FKTGKNRW 128

The following BLAST results are available for this feature:
BLAST of CsGy7G009280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658974.11.7e-6297.66PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus] >KGN44160.1 hypothet... [more]
XP_004145994.21.2e-6093.75PREDICTED: 60S ribosomal protein L27-3-like [Cucumis sativus] >KGN54977.1 60S ri... [more]
XP_008464678.14.7e-6094.53PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo][more]
XP_022940098.11.2e-5892.9760S ribosomal protein L27-3-like [Cucurbita moschata][more]
XP_022981139.14.8e-5790.6360S ribosomal protein L27-like [Cucurbita maxima][more]
BLAST of CsGy7G009280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15000.11.3e-5176.56Ribosomal L27e protein family[more]
AT3G22230.15.3e-5075.00Ribosomal L27e protein family[more]
AT2G32220.12.7e-4669.53Ribosomal L27e protein family[more]
BLAST of CsGy7G009280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q05462|RL27_PEA1.8e-5077.3460S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1[more]
sp|P51419|RL273_ARATH2.3e-5076.5660S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2[more]
sp|Q8LCL3|RL272_ARATH9.6e-4975.0060S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2[more]
sp|P41101|RL27_SOLTU4.5e-4675.0060S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1[more]
sp|Q9SKX8|RL271_ARATH5.0e-4569.5360S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1[more]
BLAST of CsGy7G009280 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K3A4|A0A0A0K3A4_CUCSA1.1e-6297.6660S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_7G209560 PE=3 SV=1[more]
tr|A0A0A0L310|A0A0A0L310_CUCSA8.2e-6193.7560S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G618420 PE=3 SV=1[more]
tr|A0A1S3CNL3|A0A1S3CNL3_CUCME3.1e-6094.5360S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103502503 PE=3 SV=1[more]
tr|A0A2N9FTH9|A0A2N9FTH9_FAGSY4.8e-5383.5960S ribosomal protein L27 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21879 PE=3 SV=... [more]
tr|A0A2P4L2S1|A0A2P4L2S1_QUESU1.4e-5284.3860s ribosomal protein l27 OS=Quercus suber OX=58331 GN=CFP56_62577 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR008991Translation_prot_SH3-like_sf
IPR038655L27e_sf
IPR001141Ribosomal_L27e
IPR005824KOW
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G009280.1CsGy7G009280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 4..31
e-value: 0.0049
score: 26.1
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 52..128
e-value: 5.0E-24
score: 84.4
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 1..128
IPR001141Ribosomal protein L27ePRODOMPD009396coord: 70..128
e-value: 3.0E-11
score: 160.0
IPR038655Ribosomal protein L27e superfamilyGENE3DG3DSA:2.30.30.770coord: 1..130
e-value: 1.1E-49
score: 170.0
NoneNo IPR availablePANTHERPTHR10497:SF460S RIBOSOMAL PROTEIN L27-1-RELATEDcoord: 1..128
NoneNo IPR availableCDDcd06090KOW_RPL27coord: 6..88
e-value: 1.28176E-36
score: 121.136
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILYSSF50104Translation proteins SH3-like domaincoord: 2..123

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy7G009280Csa7G209560Cucumber (Chinese Long) v2cgybcuB323
CsGy7G009280CSPI07G09770Wild cucumber (PI 183967)cgybcpiB331
CsGy7G009280CsaV3_7G021820Cucumber (Chinese Long) v3cgybcucB347
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy7G009280Silver-seed gourdcarcgybB0893
CsGy7G009280Watermelon (97103) v2cgybwmbB534
CsGy7G009280Wax gourdcgybwgoB661
CsGy7G009280Cucurbita maxima (Rimu)cgybcmaB882
CsGy7G009280Cucurbita maxima (Rimu)cgybcmaB939
CsGy7G009280Cucurbita moschata (Rifu)cgybcmoB864
CsGy7G009280Cucurbita moschata (Rifu)cgybcmoB922
CsGy7G009280Cucurbita pepo (Zucchini)cgybcpeB945
CsGy7G009280Cucurbita pepo (Zucchini)cgybcpeB979
CsGy7G009280Bottle gourd (USVL1VR-Ls)cgyblsiB478
CsGy7G009280Melon (DHL92) v3.5.1cgybmeB472
CsGy7G009280Melon (DHL92) v3.6.1cgybmedB469
CsGy7G009280Watermelon (Charleston Gray)cgybwcgB477
CsGy7G009280Watermelon (97103) v1cgybwmB519