CsGy7G009280.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAATTCATCAAGCCCAACAAAGCTGTTATCGTTCTTCAAGGCCGATATGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTGATTCGCAAAGATTCAAAGAAAAAGACAGAAAAAAAATCGAGAGTGAAAGCATTCATCAAGCTTGAGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAGAGTGTCGAAGGTATCGGCGTCAAAGGAGATCAAAAAGAGATTGGAGAACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTCACCAAGCTTAGGTTCTGAGGGAATCATTTCAGGTGTTAGAGGTTTGTTTTTTCTTGATTCAAATTTGGAGAAACGATTTTGATTATGATGATGAATGAATTTGTTGATTTTCTTTTTAGCTCTAAATGGGGAGAAGGAGGAAGAATGTAATCCAATGATTTTGAGTCGCTCAATCTCATTTAATTTTCTCATATTTGGATACAGATTCAATACCGATTGTTGA ATGGTGAAATTCATCAAGCCCAACAAAGCTGTTATCGTTCTTCAAGGCCGATATGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTGATTCGCAAAGATTCAAAGAAAAAGACAGAAAAAAAATCGAGAGTGAAAGCATTCATCAAGCTTGAGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAGAGTGTCGAAGGTATCGGCGTCAAAGGAGATCAAAAAGAGATTGGAGAACAGGTTTAAGACTGGGAAGAACAGATTCAATACCGATTGTTGA ATGGTGAAATTCATCAAGCCCAACAAAGCTGTTATCGTTCTTCAAGGCCGATATGCCGGCCGGAAAGCTGTGATCGTCCGAAACTTCGATGAAGGAACCCGCGACCGGCCCTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTGATTCGCAAAGATTCAAAGAAAAAGACAGAAAAAAAATCGAGAGTGAAAGCATTCATCAAGCTTGAGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAGAGTGTCGAAGGTATCGGCGTCAAAGGAGATCAAAAAGAGATTGGAGAACAGGTTTAAGACTGGGAAGAACAGATTCAATACCGATTGTTGA MVKFIKPNKAVIVLQGRYAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTEKKSRVKAFIKLENYQHIMPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENRFKTGKNRFNTDC
BLAST of CsGy7G009280.1 vs. NCBI nr
Match: XP_011658974.1 (PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus] >KGN44160.1 hypothetical protein Csa_7G209560 [Cucumis sativus]) HSP 1 Score: 248.1 bits (632), Expect = 1.7e-62 Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. NCBI nr
Match: XP_004145994.2 (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis sativus] >KGN54977.1 60S ribosomal protein L27 [Cucumis sativus]) HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60 Identity = 120/128 (93.75%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. NCBI nr
Match: XP_008464678.1 (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo]) HSP 1 Score: 240.0 bits (611), Expect = 4.7e-60 Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. NCBI nr
Match: XP_022940098.1 (60S ribosomal protein L27-3-like [Cucurbita moschata]) HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58 Identity = 119/128 (92.97%), Postives = 125/128 (97.66%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. NCBI nr
Match: XP_022981139.1 (60S ribosomal protein L27-like [Cucurbita maxima]) HSP 1 Score: 229.9 bits (585), Expect = 4.8e-57 Identity = 116/128 (90.62%), Postives = 123/128 (96.09%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TAIR10
Match: AT4G15000.1 (Ribosomal L27e protein family) HSP 1 Score: 199.5 bits (506), Expect = 1.3e-51 Identity = 98/128 (76.56%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TAIR10
Match: AT3G22230.1 (Ribosomal L27e protein family) HSP 1 Score: 194.1 bits (492), Expect = 5.3e-50 Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TAIR10
Match: AT2G32220.1 (Ribosomal L27e protein family) HSP 1 Score: 181.8 bits (460), Expect = 2.7e-46 Identity = 89/128 (69.53%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. Swiss-Prot
Match: sp|Q05462|RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 1.8e-50 Identity = 99/128 (77.34%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. Swiss-Prot
Match: sp|P51419|RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2) HSP 1 Score: 199.5 bits (506), Expect = 2.3e-50 Identity = 98/128 (76.56%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. Swiss-Prot
Match: sp|Q8LCL3|RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2) HSP 1 Score: 194.1 bits (492), Expect = 9.6e-49 Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. Swiss-Prot
Match: sp|P41101|RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 4.5e-46 Identity = 99/132 (75.00%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. Swiss-Prot
Match: sp|Q9SKX8|RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 5.0e-45 Identity = 89/128 (69.53%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TrEMBL
Match: tr|A0A0A0K3A4|A0A0A0K3A4_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_7G209560 PE=3 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62 Identity = 125/128 (97.66%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TrEMBL
Match: tr|A0A0A0L310|A0A0A0L310_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G618420 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 8.2e-61 Identity = 120/128 (93.75%), Postives = 128/128 (100.00%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TrEMBL
Match: tr|A0A1S3CNL3|A0A1S3CNL3_CUCME (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103502503 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.1e-60 Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TrEMBL
Match: tr|A0A2N9FTH9|A0A2N9FTH9_FAGSY (60S ribosomal protein L27 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21879 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.8e-53 Identity = 107/128 (83.59%), Postives = 119/128 (92.97%), Query Frame = 0
BLAST of CsGy7G009280.1 vs. TrEMBL
Match: tr|A0A2P4L2S1|A0A2P4L2S1_QUESU (60s ribosomal protein l27 OS=Quercus suber OX=58331 GN=CFP56_62577 PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52 Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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