CsGy7G002700 (gene) Cucumber (Gy14) v2

Overview
NameCsGy7G002700
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr7 : 2163808 .. 2164373 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCTAAGGCTTTCATCCTCCTCGGTCTCCTTTTCGCAGCTGTCATCCTAGAGGTAACCGCAGTTACGGCCACGAACGACATAAAATCTAGTGAGTCTAATCATTTATTAGATGATACATTGCAACACACTCTTTACTTATACTCATTTCATTAGTGTTATATGTGTGTGTTGATTCTCATGAGATATTCATTAACATTGTAGATGAAGCTTTTAAGCAAACAGATGAAATCAATGATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAACAACAAATCCTACTTTGTTGCTTTGTTTTTTGATTTCTCAAGTTCATATATTATATAATAATGTCTGCAGTCCAGTGTGTTTGCTTTTAAGTACTGAATAAATGCTTTGTTATGAAAAAAAAAAAGTAATGAATAAATGGAATGGCTTGAGATTGACT

mRNA sequence

ATGAATTCTAAGGCTTTCATCCTCCTCGGTCTCCTTTTCGCAGCTGTCATCCTAGAGATGAAGCTTTTAAGCAAACAGATGAAATCAATGATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAACAACAAATCCTACTTTGTTGCTTTGTTTTTTGATTTCTCAAGTTCATATATTATATAATAATGTCTGCAGTCCAGTGTGTTTGCTTTTAAGTACTGAATAAATGCTTTGTTATGAAAAAAAAAAAGTAATGAATAAATGGAATGGCTTGAGATTGACT

Coding sequence (CDS)

ATGAATTCTAAGGCTTTCATCCTCCTCGGTCTCCTTTTCGCAGCTGTCATCCTAGAGATGAAGCTTTTAAGCAAACAGATGAAATCAATGATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

Protein sequence

MNSKAFILLGLLFAAVILEMKLLSKQMKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Homology
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BLAST of CsGy7G002700 vs. NCBI nr
Match: KGN43449.1 (hypothetical protein Csa_7G037530 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 7.3e-22
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 27 MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 86
          MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Sbjct: 1  MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 59

[Close]
BLAST of CsGy7G002700 vs. TrEMBL
Match: tr|A0A0A0K399|A0A0A0K399_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037530 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.8e-22
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 27 MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 86
          MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Sbjct: 1  MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 59

The following BLAST results are available for this feature:
BLAST of CsGy7G002700 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43449.17.3e-22100.00hypothetical protein Csa_7G037530 [Cucumis sativus][more]
BLAST of CsGy7G002700 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy7G002700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy7G002700 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K399|A0A0A0K399_CUCSA4.8e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037530 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G002700.1CsGy7G002700.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy7G002700Csa7G037530Cucumber (Chinese Long) v2cgybcuB324
CsGy7G002700CSPI07G03010Wild cucumber (PI 183967)cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy7G002700Cucumber (Gy14) v2cgybcgybB072
CsGy7G002700Cucurbita maxima (Rimu)cgybcmaB899
CsGy7G002700Cucurbita maxima (Rimu)cgybcmaB944
CsGy7G002700Cucurbita moschata (Rifu)cgybcmoB877
CsGy7G002700Cucurbita moschata (Rifu)cgybcmoB927
CsGy7G002700Cucurbita pepo (Zucchini)cgybcpeB910
CsGy7G002700Cucurbita pepo (Zucchini)cgybcpeB919
CsGy7G002700Cucurbita pepo (Zucchini)cgybcpeB964
CsGy7G002700Cucumber (Chinese Long) v2cgybcuB296
CsGy7G002700Cucumber (Chinese Long) v2cgybcuB328
CsGy7G002700Bottle gourd (USVL1VR-Ls)cgyblsiB455
CsGy7G002700Bottle gourd (USVL1VR-Ls)cgyblsiB462
CsGy7G002700Melon (DHL92) v3.5.1cgybmeB467
CsGy7G002700Melon (DHL92) v3.5.1cgybmeB468
CsGy7G002700Melon (DHL92) v3.6.1cgybmedB464
CsGy7G002700Melon (DHL92) v3.6.1cgybmedB465
CsGy7G002700Watermelon (Charleston Gray)cgybwcgB504
CsGy7G002700Watermelon (Charleston Gray)cgybwcgB506
CsGy7G002700Watermelon (97103) v1cgybwmB565
CsGy7G002700Watermelon (97103) v1cgybwmB566
CsGy7G002700Wild cucumber (PI 183967)cgybcpiB304
CsGy7G002700Silver-seed gourdcarcgybB0217
CsGy7G002700Silver-seed gourdcarcgybB1049
CsGy7G002700Cucumber (Chinese Long) v3cgybcucB316
CsGy7G002700Cucumber (Chinese Long) v3cgybcucB348
CsGy7G002700Cucumber (Chinese Long) v3cgybcucB349
CsGy7G002700Watermelon (97103) v2cgybwmbB500
CsGy7G002700Watermelon (97103) v2cgybwmbB502
CsGy7G002700Wax gourdcgybwgoB640
CsGy7G002700Wax gourdcgybwgoB641
CsGy7G002700Wax gourdcgybwgoB650