Csa7G037530 (gene) Cucumber (Chinese Long) v2

NameCsa7G037530
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 1980489 .. 1980832 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGTTACGGCCACGAACGACATAAAATCTAGTGAGTCTAATCATTTATTAGATGATACATTGCAACACACTCTTTACTTATACTCATTTCATTAGTGTTATATGTGTGTGTTGATTCTCATGAGATATTCATTAACATTGTAGATGAAGCTTTTAAGCAAACAGATGAAATCAATGATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

mRNA sequence

ATGAAATCAATGATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

Coding sequence (CDS)

ATGAAATCAATGATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

Protein sequence

MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV*
BLAST of Csa7G037530 vs. TrEMBL
Match: A0A0A0K399_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037530 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.6e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1

Query: 1  MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 60
          MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Sbjct: 1  MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 59

BLAST of Csa7G037530 vs. NCBI nr
Match: gi|700188216|gb|KGN43449.1| (hypothetical protein Csa_7G037530 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-24
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1

Query: 1  MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 60
          MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Sbjct: 1  MKSMMSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K399_CUCSA2.6e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700188216|gb|KGN43449.1|3.7e-24100.00hypothetical protein Csa_7G037530 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU149226cucumber EST collection version 3.0transcribed_cluster
CU159302cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G037530.1Csa7G037530.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU149226CU149226transcribed_cluster
CU159302CU159302transcribed_cluster