CSPI07G03010 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G03010
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 2450519 .. 2450686 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

mRNA sequence

ATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA

Coding sequence (CDS)

ATGTCAAGCACCACGATTTGGGAGGAGAAGATGCTTCACTTGCCCAATGCCACCACCATTGCCACAAAGGTTGCTGCAAGTGTTCCCATGGTCATTGCGTCAAGTGCTGCCACTAATCTGCTGATGATCAGGCCCTGGTTGATGTACAATCTCAAGCCAAAAGTTTAA
Homology
[Close]
BLAST of CSPI07G03010 vs. TrEMBL
Match: A0A0A0K399_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037530 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.5e-21
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 56
          MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Sbjct: 5  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 59

[Close]
BLAST of CSPI07G03010 vs. NCBI nr
Match: gi|700188216|gb|KGN43449.1| (hypothetical protein Csa_7G037530 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 7.9e-21
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 56
          MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV
Sbjct: 5  MSSTTIWEEKMLHLPNATTIATKVAASVPMVIASSAATNLLMIRPWLMYNLKPKV 59

The following BLAST results are available for this feature:
BLAST of CSPI07G03010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G03010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K399_CUCSA5.5e-21100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037530 PE=4 SV=1[more]
BLAST of CSPI07G03010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G03010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188216|gb|KGN43449.1|7.9e-21100.00hypothetical protein Csa_7G037530 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G03010.1CSPI07G03010.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G03010Csa7G037530Cucumber (Chinese Long) v2cpicuB354
CSPI07G03010CsGy7G002700Cucumber (Gy14) v2cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G03010Cucumber (Chinese Long) v3cpicucB385
CSPI07G03010Cucumber (Chinese Long) v3cpicucB415
CSPI07G03010Cucumber (Chinese Long) v3cpicucB419
CSPI07G03010Watermelon (97103) v2cpiwmbB552
CSPI07G03010Watermelon (97103) v2cpiwmbB553
CSPI07G03010Wax gourdcpiwgoB680
CSPI07G03010Wax gourdcpiwgoB681
CSPI07G03010Wax gourdcpiwgoB691
CSPI07G03010Wild cucumber (PI 183967)cpicpiB090
CSPI07G03010Cucumber (Gy14) v1cgycpiB287
CSPI07G03010Cucurbita maxima (Rimu)cmacpiB151
CSPI07G03010Cucurbita maxima (Rimu)cmacpiB533
CSPI07G03010Cucurbita moschata (Rifu)cmocpiB131
CSPI07G03010Cucurbita moschata (Rifu)cmocpiB524
CSPI07G03010Cucumber (Chinese Long) v2cpicuB326
CSPI07G03010Cucumber (Chinese Long) v2cpicuB358
CSPI07G03010Melon (DHL92) v3.5.1cpimeB535
CSPI07G03010Melon (DHL92) v3.5.1cpimeB538
CSPI07G03010Watermelon (Charleston Gray)cpiwcgB574
CSPI07G03010Watermelon (97103) v1cpiwmB621
CSPI07G03010Watermelon (97103) v1cpiwmB624
CSPI07G03010Cucurbita pepo (Zucchini)cpecpiB257
CSPI07G03010Cucurbita pepo (Zucchini)cpecpiB301
CSPI07G03010Cucurbita pepo (Zucchini)cpecpiB692
CSPI07G03010Bottle gourd (USVL1VR-Ls)cpilsiB498
CSPI07G03010Bottle gourd (USVL1VR-Ls)cpilsiB505
CSPI07G03010Bottle gourd (USVL1VR-Ls)cpilsiB514
CSPI07G03010Melon (DHL92) v3.6.1cpimedB521
CSPI07G03010Melon (DHL92) v3.6.1cpimedB523
CSPI07G03010Cucumber (Gy14) v2cgybcpiB087
CSPI07G03010Silver-seed gourdcarcpiB0235
CSPI07G03010Silver-seed gourdcarcpiB1103