CsGy6G028600 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G028600
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 27426972 .. 27427154 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

mRNA sequence

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

Coding sequence (CDS)

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

Protein sequence

MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
Homology
[Close]
BLAST of CsGy6G028600 vs. NCBI nr
Match: KGN48634.1 (hypothetical protein Csa_6G495880 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60
          MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60

[Close]
BLAST of CsGy6G028600 vs. TrEMBL
Match: tr|A0A0A0KIK4|A0A0A0KIK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495880 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60
          MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60

The following BLAST results are available for this feature:
BLAST of CsGy6G028600 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48634.12.1e-28100.00hypothetical protein Csa_6G495880 [Cucumis sativus][more]
BLAST of CsGy6G028600 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G028600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G028600 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KIK4|A0A0A0KIK4_CUCSA1.4e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495880 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G028600.1CsGy6G028600.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G028600Csa6G495880Cucumber (Chinese Long) v2cgybcuB281
CsGy6G028600CSPI06G29130Wild cucumber (PI 183967)cgybcpiB287
CsGy6G028600CsaV3_6G044320Cucumber (Chinese Long) v3cgybcucB298
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G028600Cucumber (Gy14) v2cgybcgybB064
CsGy6G028600Cucumber (Gy14) v2cgybcgybB129
CsGy6G028600Cucurbita maxima (Rimu)cgybcmaB699
CsGy6G028600Cucurbita maxima (Rimu)cgybcmaB715
CsGy6G028600Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G028600Cucurbita maxima (Rimu)cgybcmaB843
CsGy6G028600Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G028600Cucurbita moschata (Rifu)cgybcmoB682
CsGy6G028600Cucurbita moschata (Rifu)cgybcmoB699
CsGy6G028600Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G028600Cucurbita moschata (Rifu)cgybcmoB822
CsGy6G028600Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G028600Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G028600Cucurbita pepo (Zucchini)cgybcpeB805
CsGy6G028600Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G028600Cucurbita pepo (Zucchini)cgybcpeB870
CsGy6G028600Cucurbita pepo (Zucchini)cgybcpeB876
CsGy6G028600Cucumber (Chinese Long) v2cgybcuB249
CsGy6G028600Cucumber (Chinese Long) v2cgybcuB269
CsGy6G028600Bottle gourd (USVL1VR-Ls)cgyblsiB398
CsGy6G028600Bottle gourd (USVL1VR-Ls)cgyblsiB425
CsGy6G028600Bottle gourd (USVL1VR-Ls)cgyblsiB441
CsGy6G028600Melon (DHL92) v3.5.1cgybmeB412
CsGy6G028600Melon (DHL92) v3.5.1cgybmeB443
CsGy6G028600Melon (DHL92) v3.5.1cgybmeB444
CsGy6G028600Melon (DHL92) v3.6.1cgybmedB410
CsGy6G028600Melon (DHL92) v3.6.1cgybmedB439
CsGy6G028600Melon (DHL92) v3.6.1cgybmedB440
CsGy6G028600Watermelon (Charleston Gray)cgybwcgB399
CsGy6G028600Watermelon (Charleston Gray)cgybwcgB461
CsGy6G028600Watermelon (97103) v1cgybwmB432
CsGy6G028600Watermelon (97103) v1cgybwmB468
CsGy6G028600Wild cucumber (PI 183967)cgybcpiB257
CsGy6G028600Wild cucumber (PI 183967)cgybcpiB276
CsGy6G028600Silver-seed gourdcarcgybB0003
CsGy6G028600Silver-seed gourdcarcgybB0388
CsGy6G028600Silver-seed gourdcarcgybB0418
CsGy6G028600Cucumber (Chinese Long) v3cgybcucB262
CsGy6G028600Cucumber (Chinese Long) v3cgybcucB284
CsGy6G028600Watermelon (97103) v2cgybwmbB394
CsGy6G028600Watermelon (97103) v2cgybwmbB470
CsGy6G028600Wax gourdcgybwgoB548
CsGy6G028600Wax gourdcgybwgoB591