CSPI06G29130 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G29130
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 25309439 .. 25309754 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTTGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATTGAGTGTTGAAAAAGGAAGAAGAAAAATGGGTTAAGGGAGAGGGTGAGTTCTGAGTTTGGCAGACAGGAGACACTTCTGTGGGCTGTCAAGCAGGCAGAATTCATCAACATGGGCCATACTTCACCAACCTGGACCCCTCTT

mRNA sequence

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTTGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGAGACACTTCTGTGGGCTGTCAAGCAGGCAGAATTCATCAACATGGGCCATACTTCACCAACCTGGACCCCTCTT

Coding sequence (CDS)

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTTGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGAGACACTTCTGTGGGCTGTCAAGCAGGCAGAATTCATCAACATGGGCCATACTTCACCAACCTGGACCCCTCTT
Homology
[Close]
BLAST of CSPI06G29130 vs. TrEMBL
Match: A0A0A0KIK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495880 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.1e-22
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 

Query: 1  MEEGGGGDRWESGVALDRDIGRVCCCVWLQRKEKNVRMFKVVEIGISICNCM 53
          MEEGGGGDRWESGVALDRDIGRVC CVWLQRKEKNVRMFKVVEIGISICNCM
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCM 52

[Close]
BLAST of CSPI06G29130 vs. NCBI nr
Match: gi|700193430|gb|KGN48634.1| (hypothetical protein Csa_6G495880 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 4.4e-22
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 1 

Query: 1  MEEGGGGDRWESGVALDRDIGRVCCCVWLQRKEKNVRMFKVVEIGISICNCM 53
          MEEGGGGDRWESGVALDRDIGRVC CVWLQRKEKNVRMFKVVEIGISICNCM
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCM 52

The following BLAST results are available for this feature:
BLAST of CSPI06G29130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G29130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIK4_CUCSA3.1e-2298.08Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495880 PE=4 SV=1[more]
BLAST of CSPI06G29130 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G29130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193430|gb|KGN48634.1|4.4e-2298.08hypothetical protein Csa_6G495880 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G29130.1CSPI06G29130.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G29130Csa6G495880Cucumber (Chinese Long) v2cpicuB313
CSPI06G29130CsaV3_6G044320Cucumber (Chinese Long) v3cpicucB363
CSPI06G29130CsGy6G028600Cucumber (Gy14) v2cgybcpiB287
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G29130Watermelon (97103) v2cpiwmbB433
CSPI06G29130Watermelon (97103) v2cpiwmbB520
CSPI06G29130Wax gourdcpiwgoB582
CSPI06G29130Wax gourdcpiwgoB626
CSPI06G29130Wax gourdcpiwgoB656
CSPI06G29130Wild cucumber (PI 183967)cpicpiB084
CSPI06G29130Wild cucumber (PI 183967)cpicpiB161
CSPI06G29130Watermelon (97103) v1cpiwmB519
CSPI06G29130Cucumber (Gy14) v1cgycpiB122
CSPI06G29130Cucumber (Gy14) v1cgycpiB523
CSPI06G29130Cucumber (Gy14) v1cgycpiB581
CSPI06G29130Cucurbita maxima (Rimu)cmacpiB034
CSPI06G29130Cucurbita maxima (Rimu)cmacpiB197
CSPI06G29130Cucurbita maxima (Rimu)cmacpiB689
CSPI06G29130Cucurbita maxima (Rimu)cmacpiB893
CSPI06G29130Cucurbita moschata (Rifu)cmocpiB024
CSPI06G29130Cucurbita moschata (Rifu)cmocpiB179
CSPI06G29130Cucurbita moschata (Rifu)cmocpiB483
CSPI06G29130Cucurbita moschata (Rifu)cmocpiB681
CSPI06G29130Cucurbita moschata (Rifu)cmocpiB873
CSPI06G29130Cucumber (Chinese Long) v2cpicuB277
CSPI06G29130Cucumber (Chinese Long) v2cpicuB300
CSPI06G29130Melon (DHL92) v3.5.1cpimeB470
CSPI06G29130Melon (DHL92) v3.5.1cpimeB507
CSPI06G29130Melon (DHL92) v3.5.1cpimeB508
CSPI06G29130Watermelon (Charleston Gray)cpiwcgB453
CSPI06G29130Watermelon (Charleston Gray)cpiwcgB529
CSPI06G29130Watermelon (97103) v1cpiwmB476
CSPI06G29130Cucurbita pepo (Zucchini)cpecpiB080
CSPI06G29130Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G29130Cucurbita pepo (Zucchini)cpecpiB843
CSPI06G29130Bottle gourd (USVL1VR-Ls)cpilsiB439
CSPI06G29130Bottle gourd (USVL1VR-Ls)cpilsiB463
CSPI06G29130Bottle gourd (USVL1VR-Ls)cpilsiB482
CSPI06G29130Melon (DHL92) v3.6.1cpimedB461
CSPI06G29130Melon (DHL92) v3.6.1cpimedB492
CSPI06G29130Melon (DHL92) v3.6.1cpimedB493
CSPI06G29130Cucumber (Gy14) v2cgybcpiB083
CSPI06G29130Cucumber (Gy14) v2cgybcpiB189
CSPI06G29130Silver-seed gourdcarcpiB0003
CSPI06G29130Silver-seed gourdcarcpiB0213
CSPI06G29130Silver-seed gourdcarcpiB0446
CSPI06G29130Silver-seed gourdcarcpiB0492
CSPI06G29130Silver-seed gourdcarcpiB0809
CSPI06G29130Cucumber (Chinese Long) v3cpicucB327
CSPI06G29130Cucumber (Chinese Long) v3cpicucB349