Csa6G495880 (gene) Cucumber (Chinese Long) v2

NameCsa6G495880
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 24155455 .. 24155637 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

mRNA sequence

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

Coding sequence (CDS)

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

Protein sequence

MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC*
BLAST of Csa6G495880 vs. TrEMBL
Match: A0A0A0KIK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495880 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 7.8e-29
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1

Query: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60
          MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60

BLAST of Csa6G495880 vs. NCBI nr
Match: gi|700193430|gb|KGN48634.1| (hypothetical protein Csa_6G495880 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1

Query: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60
          MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KIK4_CUCSA7.8e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700193430|gb|KGN48634.1|1.1e-28100.00hypothetical protein Csa_6G495880 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G495880.1Csa6G495880.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G495880CSPI06G29130Wild cucumber (PI 183967)cpicuB313
Csa6G495880CsGy6G028600Cucumber (Gy14) v2cgybcuB281
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G495880Wax gourdcuwgoB577
Csa6G495880Wax gourdcuwgoB621
Csa6G495880Wax gourdcuwgoB648
Csa6G495880Cucumber (Chinese Long) v2cucuB072
Csa6G495880Cucumber (Chinese Long) v2cucuB143
Csa6G495880Cucumber (Gy14) v1cgycuB121
Csa6G495880Cucumber (Gy14) v1cgycuB496
Csa6G495880Cucumber (Gy14) v1cgycuB552
Csa6G495880Cucurbita maxima (Rimu)cmacuB034
Csa6G495880Cucurbita maxima (Rimu)cmacuB194
Csa6G495880Cucurbita maxima (Rimu)cmacuB681
Csa6G495880Cucurbita maxima (Rimu)cmacuB775
Csa6G495880Cucurbita maxima (Rimu)cmacuB877
Csa6G495880Cucurbita moschata (Rifu)cmocuB024
Csa6G495880Cucurbita moschata (Rifu)cmocuB176
Csa6G495880Cucurbita moschata (Rifu)cmocuB477
Csa6G495880Cucurbita moschata (Rifu)cmocuB670
Csa6G495880Cucurbita moschata (Rifu)cmocuB766
Csa6G495880Cucurbita moschata (Rifu)cmocuB865
Csa6G495880Melon (DHL92) v3.5.1cumeB470
Csa6G495880Melon (DHL92) v3.5.1cumeB502
Csa6G495880Melon (DHL92) v3.5.1cumeB503
Csa6G495880Watermelon (Charleston Gray)cuwcgB432
Csa6G495880Watermelon (Charleston Gray)cuwcgB503
Csa6G495880Watermelon (97103) v1cuwmB461
Csa6G495880Watermelon (97103) v1cuwmB500
Csa6G495880Cucurbita pepo (Zucchini)cpecuB085
Csa6G495880Cucurbita pepo (Zucchini)cpecuB468
Csa6G495880Cucurbita pepo (Zucchini)cpecuB503
Csa6G495880Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G495880Bottle gourd (USVL1VR-Ls)culsiB456
Csa6G495880Bottle gourd (USVL1VR-Ls)culsiB474
Csa6G495880Cucumber (Gy14) v2cgybcuB082
Csa6G495880Cucumber (Gy14) v2cgybcuB185
Csa6G495880Melon (DHL92) v3.6.1cumedB452
Csa6G495880Melon (DHL92) v3.6.1cumedB482
Csa6G495880Melon (DHL92) v3.6.1cumedB483
Csa6G495880Silver-seed gourdcarcuB0003
Csa6G495880Silver-seed gourdcarcuB0206
Csa6G495880Silver-seed gourdcarcuB0409
Csa6G495880Silver-seed gourdcarcuB0441
Csa6G495880Silver-seed gourdcarcuB0791
Csa6G495880Watermelon (97103) v2cuwmbB412
Csa6G495880Watermelon (97103) v2cuwmbB494