CsaV3_6G044320 (gene) Cucumber (Chinese Long) v3

NameCsaV3_6G044320
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6 : 26178933 .. 26180626 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGAAAAAGGAAGAAGAAAAATGGGTTAAGGGAGAGGGTGAGTTCTGAGTTTGGCAGACAGGAGACACTTCTGTGGGCTGTCAAGCAGGCAGAATTCATCAACATGGGCCATACTTCACCAACCTGGACCCCTCTTTAAAACACTTTACCTTACTATTTGGCCCATACCTTTTCTCTCTTTCTCTTGTCTTGTTTCCTTTGTACTTCTTCTCAAACAATTATACATCTCTCTCTCTATACATATAGATATAGCTTTTTTCCTTCTAAAATTTAAATTTAGCTAGAATAATGGATGAAGAAAATAGGAAGCAAGCAATGGAAAAAGACAAATCCAATTATAAGACAATACAAGTCATGTTTTTAAAGTACTATGATAATTTTTTCGTTGACAATTTGGGTGGGAAGAGTTTAAACTTAGACTTAGGTTTAAATTGTAGTTCAAATTCATGTTAGTTGAGTTGTTCTTTTCTGTTTTGTTTTTTTTTCCATGTACAATGGTTATAGATATGCTTGTTTTGAAGGTGAATACATAAGGCCTAAGTTAAACTTTTGACCAGGATGGGGGATCCTACCCCACTGTTGGTCCTTTTGTTTTGGCTTCTTCTTAATGAAAGTTATGCATTCTATAAAAAGAAAAAAACACAATAATTACAGTTTTGAATAAAAATGAGTAAGAATCAATCAACATAAAATCCTGAAAGTTCAGATCTATAGCAGGCGCCATGATTCACCCATTTTTGAGTCAAATTAATAGTTTCATCCCCAAGATTGAGAGGCCTTGTAGTTTTTTGTCTGAAGAGTAAATACTAAACACTTACACTGTAATAGTATTGACCATAACTAAATAGTTTATGTTTAGTAAAAGGGGCACAAGTATTTAAAAAAAAAAAAACTAGAAACAGAAATCCACATTTTGGATTAGTAAACCCATAGTTTAAAAAACTAAAAAACTCAAGATCGAGAAATTCAGCAACTTAGTGAAGTTGAAAAGAGTAAAGTTTAGTCTAATCTTGAGTGAAATTAATGATTTAACATTCATTCAAATTAAGAATTGAATCAATCAAACAAGGCGTCACTTTCTGTTCAACTTATTCTGGGATAATGTGCAATTATAAGCACAGATGAATGGATGATGATAAAATAAAGAGATGAAATTTATCAAAACCCAAAGAAAAAGGTAATCCTAATTCGTAAAAAAAGAGCGCGTAATTTCAGATAGAGGAAGAAATGGAAGAAGAAAAAGGTGGAAAAAGAAGGCTCAGACACGCACAAACGCTGTCATCAAATCAAGTAAATTCGAAGGTCCGTCTGTGAATTAACACAGTACAGTATTCAGATTCGAGAAATGAATTTGTTTGTCATCACTGCCTCATTTCCACAATCTCCTACCAATTTCTTTTTCCAAAATTTTGAAACACAATCAGATTCTTAATCAACCAAACCCAAAACAAAATTAAGAAATATACCAAACTCAAACAGAAAATGAAGAGATATGAGAACAGATTGCATCCCGCG

mRNA sequence

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

Coding sequence (CDS)

ATGGAGGAAGGGGGTGGAGGAGACAGATGGGAAAGTGGAGTAGCTTTAGATCGGGACATTGGCAGAGTCTGTGGCTGTGTGTGGTTGCAGAGAAAAGAGAAAAATGTGAGAATGTTTAAGGTGGTGGAAATTGGAATAAGCATTTGCAATTGCATGGTCTTTTATGATATGAATGAGTGTTGA

Protein sequence

MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
BLAST of CsaV3_6G044320 vs. NCBI nr
Match: KGN48634.1 (hypothetical protein Csa_6G495880 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60
          MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60

BLAST of CsaV3_6G044320 vs. TrEMBL
Match: tr|A0A0A0KIK4|A0A0A0KIK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495880 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.5e-29
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60
          MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC
Sbjct: 1  MEEGGGGDRWESGVALDRDIGRVCGCVWLQRKEKNVRMFKVVEIGISICNCMVFYDMNEC 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN48634.11.3e-28100.00hypothetical protein Csa_6G495880 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KIK4|A0A0A0KIK4_CUCSA8.5e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495880 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G044320.1CsaV3_6G044320.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G044320CSPI06G29130Wild cucumber (PI 183967)cpicucB363
CsaV3_6G044320CsGy6G028600Cucumber (Gy14) v2cgybcucB298
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G044320Cucumber (Chinese Long) v3cuccucB090
CsaV3_6G044320Cucumber (Chinese Long) v3cuccucB178
CsaV3_6G044320Silver-seed gourdcarcucB0003
CsaV3_6G044320Silver-seed gourdcarcucB0213
CsaV3_6G044320Silver-seed gourdcarcucB0442
CsaV3_6G044320Silver-seed gourdcarcucB0489
CsaV3_6G044320Silver-seed gourdcarcucB0812
CsaV3_6G044320Cucumber (Gy14) v2cgybcucB087
CsaV3_6G044320Cucumber (Gy14) v2cgybcucB193
CsaV3_6G044320Cucumber (Gy14) v2cgybcucB188
CsaV3_6G044320Cucumber (Gy14) v1cgycucB126
CsaV3_6G044320Cucumber (Gy14) v1cgycucB539
CsaV3_6G044320Cucumber (Gy14) v1cgycucB600
CsaV3_6G044320Cucurbita maxima (Rimu)cmacucB0041
CsaV3_6G044320Cucurbita maxima (Rimu)cmacucB0221
CsaV3_6G044320Cucurbita maxima (Rimu)cmacucB0809
CsaV3_6G044320Cucurbita maxima (Rimu)cmacucB0914
CsaV3_6G044320Cucurbita maxima (Rimu)cmacucB0957
CsaV3_6G044320Cucurbita maxima (Rimu)cmacucB1035
CsaV3_6G044320Cucurbita moschata (Rifu)cmocucB0026
CsaV3_6G044320Cucurbita moschata (Rifu)cmocucB0211
CsaV3_6G044320Cucurbita moschata (Rifu)cmocucB0573
CsaV3_6G044320Cucurbita moschata (Rifu)cmocucB0793
CsaV3_6G044320Cucurbita moschata (Rifu)cmocucB0905
CsaV3_6G044320Cucurbita moschata (Rifu)cmocucB0946
CsaV3_6G044320Cucurbita moschata (Rifu)cmocucB1019
CsaV3_6G044320Cucurbita pepo (Zucchini)cpecucB0092
CsaV3_6G044320Cucurbita pepo (Zucchini)cpecucB0576
CsaV3_6G044320Cucurbita pepo (Zucchini)cpecucB0618
CsaV3_6G044320Cucurbita pepo (Zucchini)cpecucB0983
CsaV3_6G044320Cucurbita pepo (Zucchini)cpecucB1033
CsaV3_6G044320Wild cucumber (PI 183967)cpicucB111
CsaV3_6G044320Wild cucumber (PI 183967)cpicucB239
CsaV3_6G044320Bottle gourd (USVL1VR-Ls)cuclsiB462
CsaV3_6G044320Bottle gourd (USVL1VR-Ls)cuclsiB486
CsaV3_6G044320Bottle gourd (USVL1VR-Ls)cuclsiB504
CsaV3_6G044320Melon (DHL92) v3.5.1cucmeB481
CsaV3_6G044320Melon (DHL92) v3.5.1cucmeB516
CsaV3_6G044320Melon (DHL92) v3.5.1cucmeB517
CsaV3_6G044320Melon (DHL92) v3.6.1cucmedB470
CsaV3_6G044320Melon (DHL92) v3.6.1cucmedB503
CsaV3_6G044320Melon (DHL92) v3.6.1cucmedB504
CsaV3_6G044320Melon (DHL92) v3.6.1cucmedB505
CsaV3_6G044320Watermelon (Charleston Gray)cucwcgB450
CsaV3_6G044320Watermelon (Charleston Gray)cucwcgB455
CsaV3_6G044320Watermelon (Charleston Gray)cucwcgB521
CsaV3_6G044320Watermelon (97103) v1cucwmB486
CsaV3_6G044320Watermelon (97103) v1cucwmB526
CsaV3_6G044320Watermelon (97103) v2cucwmbB430
CsaV3_6G044320Watermelon (97103) v2cucwmbB512
CsaV3_6G044320Wax gourdcucwgoB596
CsaV3_6G044320Wax gourdcucwgoB642
CsaV3_6G044320Wax gourdcucwgoB669