CsGy6G010510 (gene) Cucumber (Gy14) v2

NameCsGy6G010510
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionpyrroline-5-carboxylate reductase
LocationChr6 : 9024363 .. 9024830 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATACTGTACAAAACAAGCCAAAAGGAAGAAAGAACAAAGGAGCCATCTTGGAGTTCACCAAAACAATGGCCTCTAGTTCTACTACTCTTGGGATGTACTTTTGGTTCCATTCTATTTGGTTCAGTGCACCAAAATAGTAGTGCTAGTGTAGTTGTGGTTGGTGGCTTGATGGTTTTGGCTGCAGTGGGGGTGGCGGTGGCGGTGGCGGTTATTGGTGTGGCGGGGTTGGTGACGTGGATCACAGTTGTGGTTTTTTTATGGTTAATTGGGAGGTCGAGACGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGAGATAATGGTGGGGTTTATGGTGAGGGTTTTATTGAAAGAAGGCAATGTTTTGGGTGCCATTTCAGCTGCTGTTTTTGGTTACCTTGGTCTTTGCATGGGCTCCATTATTATTTCTTCCTACTCCAAATTATTTTGGTTGAAATAA

mRNA sequence

ATGGCAATACTGTACAAAACAAGCCAAAAGGAAGAAAGAACAAAGGAGCCATCTTGGAGTTCACCAAAACAATGGCCTCTAGTTCTACTACTCTTGGGATGTACTTTTGGTTCCATTCTATTTGGTTCAGTGCACCAAAATAGTAGTGCTAGTGTAGTTGTGGTTGGTGGCTTGATGGTTTTGGCTGCAGTGGGGGTGGCGGTGGCGGTGGCGGTTATTGGTGTGGCGGGGTTGGTGACGTGGATCACAGTTGTGGTTTTTTTATGGTTAATTGGGAGGTCGAGACGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGAGATAATGGTGGGGTTTATGGTGAGGGTTTTATTGAAAGAAGGCAATGTTTTGGGTGCCATTTCAGCTGCTGTTTTTGGTTACCTTGGTCTTTGCATGGGCTCCATTATTATTTCTTCCTACTCCAAATTATTTTGGTTGAAATAA

Coding sequence (CDS)

ATGGCAATACTGTACAAAACAAGCCAAAAGGAAGAAAGAACAAAGGAGCCATCTTGGAGTTCACCAAAACAATGGCCTCTAGTTCTACTACTCTTGGGATGTACTTTTGGTTCCATTCTATTTGGTTCAGTGCACCAAAATAGTAGTGCTAGTGTAGTTGTGGTTGGTGGCTTGATGGTTTTGGCTGCAGTGGGGGTGGCGGTGGCGGTGGCGGTTATTGGTGTGGCGGGGTTGGTGACGTGGATCACAGTTGTGGTTTTTTTATGGTTAATTGGGAGGTCGAGACGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGAGATAATGGTGGGGTTTATGGTGAGGGTTTTATTGAAAGAAGGCAATGTTTTGGGTGCCATTTCAGCTGCTGTTTTTGGTTACCTTGGTCTTTGCATGGGCTCCATTATTATTTCTTCCTACTCCAAATTATTTTGGTTGAAATAA

Protein sequence

MAILYKTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMVLAAVGVAVAVAVIGVAGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLGLCMGSIIISSYSKLFWLK
BLAST of CsGy6G010510 vs. NCBI nr
Match: KGN46737.1 (hypothetical protein Csa_6G127980 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.9e-68
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MAILYKTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMV 60
           MA+LYKTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMV
Sbjct: 31  MAVLYKTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMV 90

Query: 61  LAAXXXXXXXXXXXXXGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLK 120
           LAAXXXXXXXXXXXXXGLVTWITVVVFLWLIGRSRRRLVAEGRKISKE+MVGFMVRVLLK
Sbjct: 91  LAAXXXXXXXXXXXXXGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEVMVGFMVRVLLK 150

Query: 121 EGNVLGAISAAVFGYLGLCMGSIIISSYSKLFWLK 156
           EGNVLGAISAAVFGYLGLCMGSIIISSYSKLFWLK
Sbjct: 151 EGNVLGAISAAVFGYLGLCMGSIIISSYSKLFWLK 185

BLAST of CsGy6G010510 vs. NCBI nr
Match: XP_023534045.1 (uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.8 bits (190), Expect = 3.6e-11
Identity = 64/138 (46.38%), Postives = 80/138 (57.97%), Query Frame = 0

Query: 12  ERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMVLAAXXXXXXXX 71
           E  ++  +  P+ W      LGC  G + F  V      ++VVVGGL+V  A        
Sbjct: 2   EGARKAPFFPPQLWAAA---LGC--GVVAFCLVQLGHYCTLVVVGGLLVSLA-------- 61

Query: 72  XXXXXGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAA 131
           XXXXX         VFL LIGRSR+R+VAEGRKISKEIMVG +V+VLLKEG VLG +  A
Sbjct: 62  XXXXXXXXXXXXXXVFLVLIGRSRQRVVAEGRKISKEIMVGLVVKVLLKEGKVLGGLCGA 121

Query: 132 VFGYLGLCMG-SIIISSY 149
           V G L +  G S+ I+ Y
Sbjct: 122 VLGCLAVAWGPSLPIAHY 126

BLAST of CsGy6G010510 vs. NCBI nr
Match: OWM91039.1 (hypothetical protein CDL15_Pgr023372 [Punica granatum] >PKI54646.1 hypothetical protein CRG98_024997 [Punica granatum])

HSP 1 Score: 66.6 bits (161), Expect = 8.3e-08
Identity = 49/119 (41.18%), Postives = 63/119 (52.94%), Query Frame = 0

Query: 20  SSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMVLAAXXXXXXXXXXXXXGLV 79
           S P  WP V       + S++ G+V            GL+ + A              LV
Sbjct: 68  SGPSGWPAV-------YASVMLGAVF-----------GLLSMVAALAVAVPAM-----LV 127

Query: 80  TWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLGL 139
           TWITVVV L   G+ RR LV EGRKI++EI VGF+ ++LLKEGNV+ A+  AV GY  L
Sbjct: 128 TWITVVVLLAFFGKPRRTLVVEGRKITREI-VGFVCKILLKEGNVVAAV-CAVVGYFAL 161

BLAST of CsGy6G010510 vs. NCBI nr
Match: OIW08365.1 (hypothetical protein TanjilG_03041 [Lupinus angustifolius])

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0

Query: 78  LVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLG 137
           LVTWIT+VV L   G+ RR LV EGRKI++EI V F+V++LLKEGNV+ A+  AV GY  
Sbjct: 103 LVTWITIVVLLAFFGKPRRTLVVEGRKITREIFV-FVVKILLKEGNVVAAV-CAVLGYFA 161

Query: 138 L 139
           L
Sbjct: 163 L 161

BLAST of CsGy6G010510 vs. NCBI nr
Match: XP_019449027.1 (PREDICTED: uncharacterized protein LOC109351836 [Lupinus angustifolius])

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0

Query: 78  LVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLG 137
           LVTWIT+VV L   G+ RR LV EGRKI++EI V F+V++LLKEGNV+ A+  AV GY  
Sbjct: 138 LVTWITIVVLLAFFGKPRRTLVVEGRKITREIFV-FVVKILLKEGNVVAAV-CAVLGYFA 196

Query: 138 L 139
           L
Sbjct: 198 L 196

BLAST of CsGy6G010510 vs. TAIR10
Match: AT4G03600.1 (unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.8e-09
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0

Query: 78  LVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYL 137
           +V WI+VVV L   G+SRR LV EGRKI++E+ VGF+ +VLLKEGNV+ A  A +  +L
Sbjct: 96  MVIWISVVVLLAFFGKSRRVLVVEGRKITREV-VGFVFKVLLKEGNVVAAFCAVLAYFL 153

BLAST of CsGy6G010510 vs. TAIR10
Match: AT1G03730.1 (unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0

Query: 78  LVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGY 136
           +V WI+VVV L   G+SRR LV E RKI++E+  GF+ +VLLKEGN + A+  AV GY
Sbjct: 101 MVIWISVVVLLAFFGKSRRVLVVEARKITREVF-GFVFKVLLKEGNAVAAV-CAVLGY 156

BLAST of CsGy6G010510 vs. TAIR10
Match: AT4G28330.1 (unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 4.6e-08
Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 0

Query: 41  FGSVHQNSS------ASVVV--VGGLMVLAAXXXXXXXXXXXXXGLVTWITVVVFLWLIG 100
           +G  HQ SS      ASV++  V G++ +AA              +V WI+VVV +   G
Sbjct: 52  YGENHQTSSGLPAIYASVLLGAVFGVLSMAAALFIAVPAI-----VVIWISVVVTMAFAG 111

Query: 101 RSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLGLCMGSIIISSYS 150
           +SR+R+V EGRK++KEI  GF+ RVLLKEGN + A+  A+  Y       +  +SYS
Sbjct: 112 KSRKRVVIEGRKVTKEI-AGFVFRVLLKEGNFV-ALLCALLAYF------VFFNSYS 155

BLAST of CsGy6G010510 vs. TAIR10
Match: AT4G28340.1 (unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.3e-06
Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 0

Query: 41  FGSVHQNSS------ASVVV--VGGLMVLAAXXXXXXXXXXXXXGLVTWITVVVFLWLIG 100
           +G  HQ SS      ASV++  V G++ +AA              +V WI+VVV +    
Sbjct: 52  YGENHQTSSGLPAIYASVLLGAVFGVLSMAAALFIAVPAI-----VVIWISVVVTIAFPV 111

Query: 101 RSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAV 133
           +SR+++V EGRK++KEI  G++ +VLLKEGN +  + A +
Sbjct: 112 KSRKKVVIEGRKVTKEI-AGYVFKVLLKEGNFVALLCAVI 145

BLAST of CsGy6G010510 vs. TrEMBL
Match: tr|A0A0A0KE95|A0A0A0KE95_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127980 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.2e-68
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 0

Query: 1   MAILYKTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMV 60
           MA+LYKTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMV
Sbjct: 31  MAVLYKTSQKEERTKEPSWSSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMV 90

Query: 61  LAAXXXXXXXXXXXXXGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLK 120
           LAAXXXXXXXXXXXXXGLVTWITVVVFLWLIGRSRRRLVAEGRKISKE+MVGFMVRVLLK
Sbjct: 91  LAAXXXXXXXXXXXXXGLVTWITVVVFLWLIGRSRRRLVAEGRKISKEVMVGFMVRVLLK 150

Query: 121 EGNVLGAISAAVFGYLGLCMGSIIISSYSKLFWLK 156
           EGNVLGAISAAVFGYLGLCMGSIIISSYSKLFWLK
Sbjct: 151 EGNVLGAISAAVFGYLGLCMGSIIISSYSKLFWLK 185

BLAST of CsGy6G010510 vs. TrEMBL
Match: tr|A0A218Y2G8|A0A218Y2G8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr023372 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.5e-08
Identity = 49/119 (41.18%), Postives = 63/119 (52.94%), Query Frame = 0

Query: 20  SSPKQWPLVLLLLGCTFGSILFGSVHQNSSASVVVVGGLMVLAAXXXXXXXXXXXXXGLV 79
           S P  WP V       + S++ G+V            GL+ + A              LV
Sbjct: 68  SGPSGWPAV-------YASVMLGAVF-----------GLLSMVAALAVAVPAM-----LV 127

Query: 80  TWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLGL 139
           TWITVVV L   G+ RR LV EGRKI++EI VGF+ ++LLKEGNV+ A+  AV GY  L
Sbjct: 128 TWITVVVLLAFFGKPRRTLVVEGRKITREI-VGFVCKILLKEGNVVAAV-CAVVGYFAL 161

BLAST of CsGy6G010510 vs. TrEMBL
Match: tr|W9QTB5|W9QTB5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004790 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 0

Query: 78  LVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLG 137
           LVTWI +VV L   G+ RR LV EGRKI++EI VGF++++LLKEGNV+ A+  AV GY  
Sbjct: 98  LVTWIAIVVLLAFFGKPRRDLVVEGRKITREI-VGFVLKILLKEGNVVAAV-CAVLGYFA 156

Query: 138 L 139
           L
Sbjct: 158 L 156

BLAST of CsGy6G010510 vs. TrEMBL
Match: tr|A0A2P4M2W0|A0A2P4M2W0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_60978 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0

Query: 78  LVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLG 137
           LVTWIT++V L   G+ +R LV EGR I+KEI VGF++++LLKEGNV+ A+  AV GY  
Sbjct: 20  LVTWITIIVLLTFFGKPKRDLVVEGRTITKEI-VGFLLKILLKEGNVVAAV-CAVLGYFA 78

Query: 138 L 139
           L
Sbjct: 80  L 78

BLAST of CsGy6G010510 vs. TrEMBL
Match: tr|A0A2N9F0Z5|A0A2N9F0Z5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8423 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.6e-07
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0

Query: 78  LVTWITVVVFLWLIGRSRRRLVAEGRKISKEIMVGFMVRVLLKEGNVLGAISAAVFGYLG 137
           LVTWITV+V L   G+ +R LV EGR ++KEI VGF++++LLKEGNV+ A+  AV GY  
Sbjct: 107 LVTWITVMVLLAFFGKPKRTLVVEGRMVTKEI-VGFLLKILLKEGNVVAAV-CAVLGYFA 165

Query: 138 L 139
           L
Sbjct: 167 L 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN46737.11.9e-6898.71hypothetical protein Csa_6G127980 [Cucumis sativus][more]
XP_023534045.13.6e-1146.38uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo][more]
OWM91039.18.3e-0841.18hypothetical protein CDL15_Pgr023372 [Punica granatum] >PKI54646.1 hypothetical ... [more]
OIW08365.11.4e-0760.66hypothetical protein TanjilG_03041 [Lupinus angustifolius][more]
XP_019449027.11.4e-0760.66PREDICTED: uncharacterized protein LOC109351836 [Lupinus angustifolius][more]
Match NameE-valueIdentityDescription
AT4G03600.11.8e-0955.93unknown protein[more]
AT1G03730.11.6e-0855.17unknown protein[more]
AT4G28330.14.6e-0839.32unknown protein[more]
AT4G28340.13.3e-0637.00unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KE95|A0A0A0KE95_CUCSA1.2e-6898.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127980 PE=4 SV=1[more]
tr|A0A218Y2G8|A0A218Y2G8_PUNGR5.5e-0841.18Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr023372 PE=4 SV=1[more]
tr|W9QTB5|W9QTB5_9ROSA2.1e-0759.02Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004790 PE=4 SV=1[more]
tr|A0A2P4M2W0|A0A2P4M2W0_QUESU2.1e-0757.38Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_60978 PE=4 SV=1[more]
tr|A0A2N9F0Z5|A0A2N9F0Z5_FAGSY3.6e-0757.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8423 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G010510.1CsGy6G010510.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR34656FAMILY NOT NAMEDcoord: 48..140
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..34
score: 5.0

The following gene(s) are paralogous to this gene:

None