Carg19125 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19125
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pyrroline-5-carboxylate reductase
Location	Cucurbita_argyrosperma_scaffold_112 : 299908 .. 300411 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG

mRNA sequence

ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG

Coding sequence (CDS)

ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG

Protein sequence

MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES

Homology

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_023531926.1 (uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 6.1e-81
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR
Sbjct: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 167

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_022988973.1 (uncharacterized protein LOC111486173 [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 5.2e-80
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EV-SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120
           EV SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_022930709.1 (uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata])

HSP 1 Score: 305.4 bits (781), Expect = 1.1e-79
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           EV SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR
Sbjct: 61  EV-SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 166

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_022148023.1 (uncharacterized protein LOC111016811 [Momordica charantia])

HSP 1 Score: 275.8 bits (704), Expect = 9.7e-71
Identity = 148/167 (88.62%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPET  P +YSL MRVMSKRRTWVCLFVLVYAL+LSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETAPPPFYSLFMRVMSKRRTWVCLFVLVYALILSSSWNFLASILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
            V   SS+SFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKP+R
Sbjct: 61  GV---SSASFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPRR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKIT+EIFGVV +ILLKEGN+VAAVCA+LGYFALFRK+N+S
Sbjct: 121 ALVVEGRKITREIFGVVLRILLKEGNVVAAVCALLGYFALFRKTNDS 164

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_008455313.1 (PREDICTED: uncharacterized protein LOC103495508 [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 6.3e-70
Identity = 151/172 (87.79%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQW-----YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MADNKEEDPET  PQ      YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFF 120
           YKSQVE   +SSSSFGWPAIYASLLLG VFGV+SMVAALAVM+PATLVTWI IVVLLYFF
Sbjct: 61  YKSQVE---ASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFF 120

Query: 121 GKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           GKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 GKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Carg19125 vs. TAIR10
Match: AT1G03730.1 (unknown protein)

HSP 1 Score: 190.3 bits (482), Expect = 9.8e-49
Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 14  PQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSSFGWP 73
           P+ Y + MR+MSKRRTWVCLFV VYA+LL+SSWNFL S+LSWYK Q    +SS S    P
Sbjct: 16  PRSYLIFMRIMSKRRTWVCLFVAVYAILLASSWNFLTSVLSWYKLQY---TSSPSPSRLP 75

Query: 74  AIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITKEI 133
           A+YAS++LGAVFG +SMVAA AV VPA +V WI++VVLL FFGK +R LVVE RKIT+E+
Sbjct: 76  AVYASVVLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFGKSRRVLVVEARKITREV 135

Query: 134 FGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           FG V K+LLKEGN VAAVCAVLGYF L RK  +S
Sbjct: 136 FGFVFKVLLKEGNAVAAVCAVLGYFILIRKDFDS 166

[Close]

BLAST of Carg19125 vs. TAIR10
Match: AT4G03600.1 (unknown protein)

HSP 1 Score: 181.8 bits (460), Expect = 3.5e-46
Identity = 95/158 (60.13%), Postives = 123/158 (77.85%), Query Frame = 0


Query: 10  ETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSS 69
           +T +P+ Y + + +MSKRRTWVCLF+ VYA+L+SSSWN L S+L+WYK Q   S+S  S 
Sbjct: 4   QTESPRSYHIFITIMSKRRTWVCLFIAVYAILVSSSWNLLRSVLNWYKLQYTSSNSDYSP 63

Query: 70  FGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKI 129
              PA+YAS++LGA+FG +SMVAA+ V VPA +V WI++VVLL FFGK +R LVVEGRKI
Sbjct: 64  SRLPAVYASVVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVEGRKI 123

Query: 130 TKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           T+E+ G V K+LLKEGN+VAA CAVL YF L R+  +S
Sbjct: 124 TREVVGFVFKVLLKEGNVVAAFCAVLAYFLLIRRDFDS 161

[Close]

BLAST of Carg19125 vs. TAIR10
Match: AT4G28330.1 (unknown protein)

HSP 1 Score: 167.5 bits (423), Expect = 6.8e-42
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MAD  +E+PET+    Y L +RV+SKRRTW CLF++VYA+LLSSSWN L SI++WY    
Sbjct: 1   MAD--KEEPETMTS--YKLFLRVISKRRTWACLFLVVYAILLSSSWNSLNSIVNWYGENH 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           + SS      G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F GK ++
Sbjct: 61  QTSS------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAGKSRK 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
            +V+EGRK+TKEI G V ++LLKEGN VA +CA+L YF  F   + S
Sbjct: 121 RVVIEGRKVTKEIAGFVFRVLLKEGNFVALLCALLAYFVFFNSYSSS 157

[Close]

BLAST of Carg19125 vs. TAIR10
Match: AT4G28340.1 (unknown protein)

HSP 1 Score: 157.1 bits (396), Expect = 9.2e-39
Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MAD +E++  T     Y L +RV+SKRRTWVCLF++VYA+LLSSS N L SI++WY    
Sbjct: 1   MADKEEQETMTS----YKLFLRVISKRRTWVCLFLVVYAVLLSSSRNSLNSIVNWYGENH 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           + SS      G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F  K ++
Sbjct: 61  QTSS------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPVKSRK 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALF 162
            +V+EGRK+TKEI G V K+LLKEGN VA +CAV+ YF  F
Sbjct: 121 KVVIEGRKVTKEIAGYVFKVLLKEGNFVALLCAVIAYFVFF 151

[Close]

BLAST of Carg19125 vs. TrEMBL
Match: tr|A0A1S3C0S4|A0A1S3C0S4_CUCME (uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.2e-70
Identity = 151/172 (87.79%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQW-----YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MADNKEEDPET  PQ      YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFF 120
           YKSQVE   +SSSSFGWPAIYASLLLG VFGV+SMVAALAVM+PATLVTWI IVVLLYFF
Sbjct: 61  YKSQVE---ASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFF 120

Query: 121 GKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           GKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 GKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Carg19125 vs. TrEMBL
Match: tr|A0A0A0K1T7|A0A0A0K1T7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048040 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.0e-69
Identity = 148/172 (86.05%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQW-----YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MADNKEE+PET  PQ      YSL M+VMSKRRTWVCLFVLVYALLLSSSWNFL SILSW
Sbjct: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFF 120
           YKSQVE   +SSSSFGWPAIYASLLLG VFGV+SMVAALAVM+PATLVTWI IVVLLYFF
Sbjct: 61  YKSQVE---ASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFF 120

Query: 121 GKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           GKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 GKPRRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Carg19125 vs. TrEMBL
Match: tr|W9QTB5|W9QTB5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004790 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.0e-55
Identity = 125/165 (75.76%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADN EE+ E   P  Y+L +RVMSKRRTW+C+FVLVYA++L+SSWNFL SILSWY  Q 
Sbjct: 1   MADNLEEEQER-TPSSYTLFLRVMSKRRTWLCIFVLVYAIILTSSWNFLKSILSWYNLQ- 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
             S SSSS+ GWPA+YAS+LLGAVFGV+SMVAALAV+VPATLVTWI IVVLL FFGKP+R
Sbjct: 61  --SKSSSSTSGWPALYASVLLGAVFGVVSMVAALAVVVPATLVTWIAIVVLLAFFGKPRR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSN 166
            LVVEGRKIT+EI G V KILLKEGN+VAAVCAVLGYFAL RK+N
Sbjct: 121 DLVVEGRKITREIVGFVLKILLKEGNVVAAVCAVLGYFALVRKNN 161

[Close]

BLAST of Carg19125 vs. TrEMBL
Match: tr|A0A2P6RTV5|A0A2P6RTV5_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0126711 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.2e-55
Identity = 121/172 (70.35%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQ-----WYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MAD  EE+ +T AP+     +Y + +R+MSKRRTWVC+FVLVYA+LL+SSWNFL SILSW
Sbjct: 1   MADKGEEEQDTAAPRPLPPSYYLVFLRIMSKRRTWVCIFVLVYAILLTSSWNFLKSILSW 60

Query: 61  YKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFF 120
           YK Q      S SS+GWPA+YAS+LLGAVFG+LSM AALAVMVPATLVTWI IVVLL FF
Sbjct: 61  YKLQ---GQPSPSSYGWPALYASVLLGAVFGLLSMFAALAVMVPATLVTWIAIVVLLAFF 120

Query: 121 GKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           GKP+ +LVVEGRKIT+EI G+V KILLKEGNLVAAVCA++GYFALFR++  +
Sbjct: 121 GKPRTSLVVEGRKITREIVGIVFKILLKEGNLVAAVCAIVGYFALFRRNGNA 169

[Close]

BLAST of Carg19125 vs. TrEMBL
Match: tr|A0A2N9F0Z5|A0A2N9F0Z5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8423 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.9e-53
Identity = 115/150 (76.67%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 17  YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSSFGWPAIY 76
           Y L++RVMSKRRTWVC++V VY +LL+ SWNFL SILSWYK  ++  SSSSSS GWPA+Y
Sbjct: 24  YMLLLRVMSKRRTWVCIYVTVYGILLTCSWNFLKSILSWYK--LQALSSSSSSSGWPALY 83

Query: 77  ASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITKEIFGV 136
           AS+LLGA+FGVLSMVAALAVMVPATLVTWIT++VLL FFGKPKR LVVEGR +TKEI G 
Sbjct: 84  ASVLLGALFGVLSMVAALAVMVPATLVTWITVMVLLAFFGKPKRTLVVEGRMVTKEIVGF 143

Query: 137 VAKILLKEGNLVAAVCAVLGYFALFRKSNE 167
           + KILLKEGN+VAAVCAVLGYFAL R++NE
Sbjct: 144 LLKILLKEGNVVAAVCAVLGYFALVRRNNE 171

The following BLAST results are available for this feature:

BLAST of Carg19125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531926.1	6.1e-81	99.40	uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022988973.1	5.2e-80	99.40	uncharacterized protein LOC111486173 [Cucurbita maxima]	[more]
XP_022930709.1	1.1e-79	99.40	uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata]	[more]
XP_022148023.1	9.7e-71	88.62	uncharacterized protein LOC111016811 [Momordica charantia]	[more]
XP_008455313.1	6.3e-70	87.79	PREDICTED: uncharacterized protein LOC103495508 [Cucumis melo]	[more]

BLAST of Carg19125 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03730.1	9.8e-49	67.53	unknown protein	[more]
AT4G03600.1	3.5e-46	60.13	unknown protein	[more]
AT4G28330.1	6.8e-42	56.89	unknown protein	[more]
AT4G28340.1	9.2e-39	57.14	unknown protein	[more]

BLAST of Carg19125 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19125 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0S4\|A0A1S3C0S4_CUCME	4.2e-70	87.79	uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=...	[more]
tr\|A0A0A0K1T7\|A0A0A0K1T7_CUCSA	6.0e-69	86.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048040 PE=4 SV=1	[more]
tr\|W9QTB5\|W9QTB5_9ROSA	1.0e-55	75.76	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004790 PE=4 SV=1	[more]
tr\|A0A2P6RTV5\|A0A2P6RTV5_ROSCH	2.2e-55	70.35	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0126711 PE=4...	[more]
tr\|A0A2N9F0Z5\|A0A2N9F0Z5_FAGSY	7.9e-53	76.67	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8423 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19125-RA	Carg19125-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34656	FAMILY NOT NAMED	coord: 1..166
None	No IPR available	PANTHER	PTHR34656:SF1	SUBFAMILY NOT NAMED	coord: 1..166

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19125	Cla002267	Watermelon (97103) v1	carwmB0717
Carg19125	Cla013559	Watermelon (97103) v1	carwmB0719
Carg19125	Csa7G048040	Cucumber (Chinese Long) v2	carcuB0739
Carg19125	MELO3C018731	Melon (DHL92) v3.5.1	carmeB0715
Carg19125	MELO3C013623	Melon (DHL92) v3.5.1	carmeB0714
Carg19125	ClCG07G002860	Watermelon (Charleston Gray)	carwcgB0697
Carg19125	ClCG02G017670	Watermelon (Charleston Gray)	carwcgB0695
Carg19125	CSPI07G04680	Wild cucumber (PI 183967)	carcpiB0755
Carg19125	Cucsa.147610	Cucumber (Gy14) v1	carcgyB0810
Carg19125	Cucsa.119130	Cucumber (Gy14) v1	carcgyB0808
Carg19125	CmaCh11G018800	Cucurbita maxima (Rimu)	carcmaB1006
Carg19125	CmoCh11G019590	Cucurbita moschata (Rifu)	carcmoB0979
Carg19125	Lsi11G015630	Bottle gourd (USVL1VR-Ls)	carlsiB659
Carg19125	Lsi10G008990	Bottle gourd (USVL1VR-Ls)	carlsiB657
Carg19125	Cp4.1LG04g03060	Cucurbita pepo (Zucchini)	carcpeB1015
Carg19125	CsGy6G010510	Cucumber (Gy14) v2	carcgybB0716
Carg19125	MELO3C018731.2	Melon (DHL92) v3.6.1	carmedB0728
Carg19125	MELO3C013623.2	Melon (DHL92) v3.6.1	carmedB0727
Carg19125	CsaV3_7G004480	Cucumber (Chinese Long) v3	carcucB0758
Carg19125	CsaV3_6G012890	Cucumber (Chinese Long) v3	carcucB0757
Carg19125	Cla97C07G131190	Watermelon (97103) v2	carwmbB0754
Carg19125	Bhi05G001624	Wax gourd	carwgoB0847

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19125	Watermelon (97103) v2	carwmbB0751
Carg19125	Wax gourd	carwgoB0849
Carg19125	Silver-seed gourd	carcarB035
Carg19125	Silver-seed gourd	carcarB176
Carg19125	Silver-seed gourd	carcarB590
Carg19125	Cucumber (Gy14) v2	carcgybB0717
Carg19125	Cucumber (Gy14) v1	carcgyB0809
Carg19125	Cucurbita maxima (Rimu)	carcmaB1007
Carg19125	Cucurbita maxima (Rimu)	carcmaB1008
Carg19125	Cucurbita maxima (Rimu)	carcmaB1010
Carg19125	Cucurbita moschata (Rifu)	carcmoB0980
Carg19125	Cucurbita moschata (Rifu)	carcmoB0981
Carg19125	Cucurbita moschata (Rifu)	carcmoB0983
Carg19125	Cucurbita pepo (Zucchini)	carcpeB1012
Carg19125	Cucurbita pepo (Zucchini)	carcpeB1013
Carg19125	Cucurbita pepo (Zucchini)	carcpeB1016