CSPI07G04680 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G04680
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	F21B7.33
Location	Chr7 : 3473520 .. 3474767 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCTTCCAATAACACAACCTATTAAACCAATCCCATTGAAAAGTAACACACAAAGCACCAAAACAGAGAGTGGATTGTTGTTATTATTATTATTATTGTTTTTAGCTTTTCTTTACCTTCGCTCTTCTCTTACAAATACCATCTGCTTTTTCATCTTCTCTCACTGCCCCTTGACACCAAAAGGGGAAAGCACAAAACCAGAGAGAAAGAAGCTATAGAAGGAACTGAAATCAAATCACAGAGTTAAACTGATTTGGAAATCAAGGTTTGTTTTTTATTTATTTATTTTTGAAATGGCAGACAATAAGGAAGAAGAACCAGAAACAGCCCCACCACAACAAGCAATACCCAAATCTTATTCATTGTTTATGAAAGTTATGAGCAAAAGAAGAACATGGGTATGTTTATTTGTTCTAGTTTATGCTCTTCTTTTGTCATCTTCTTGGAATTTTCTTGTTTCTATATTGTCTTGGTATAAATCCCAAGTGGAAGCTTCTTCTTCTTCATTTGGGTGGCCTGCAATTTATGCTTCTTTGCTTCTTGGAGGTGTTTTTGGGGTTATTTCAATGGTGGCTGCACTGGCTGTGATGATTCCTGCTACACTTGTCACTTGGATTGCCATTGTTGTGTTGCTTTATTTCTTTGGGAAGCCAAGGAGGTTGTTGGTGGTGGAAGGGAGGAAGATCACCAAAGAGATTTTTGGCGTCGTGGTTAAGATTTTGTTGAAGGAAGGGAATCTGGTGGCTGCTGTCTGTGCTGTTTTGGGTTATTTTGCACTTTTTAGGAAGACTAACGAGAGTTAGAGATACTGAAATTCAGACTAAGAATTTAGGGTTTTGAATCAAATGGGTATCTGAAATTTCGGGCGAGGGTTTGATTTGGTAAAGTTTTTTTTTTTTTTTTTTTTTGGGATTATACGTGTAGGTGAAGCAATTTCTGTGGGTTATATTCTGACATTGTGTAATGGGGGAATGATGGATTTGGGGAATTAATTGGGGTTTTAATGGTTTAACTTTAGATCTTCTTTGTAGCTGTAGAGAGCTGTTGGGTTTATATGAATTATAACTTATAATACTCTTTTGTTCTTTTTAGAATTGATGAGTTCTCTCCAGAAATGCTTCTTCATAACTAGAGATTTGCGGTTCTCTCTGTTTTTTGTTCCCTTTGTTCGCATTTTCTACTAATTCAATTCAATGATACTCGAAAACATTAGAGCTCTTATTCCCTCACTCTATCGTCATCGGGCT

mRNA sequence

ATGGCAGACAATAAGGAAGAAGAACCAGAAACAGCCCCACCACAACAAGCAATACCCAAATCTTATTCATTGTTTATGAAAGTTATGAGCAAAAGAAGAACATGGGTATGTTTATTTGTTCTAGTTTATGCTCTTCTTTTGTCATCTTCTTGGAATTTTCTTGTTTCTATATTGTCTTGGTATAAATCCCAAGTGGAAGCTTCTTCTTCTTCATTTGGGTGGCCTGCAATTTATGCTTCTTTGCTTCTTGGAGGTGTTTTTGGGGTTATTTCAATGGTGGCTGCACTGGCTGTGATGATTCCTGCTACACTTGTCACTTGGATTGCCATTGTTGTGTTGCTTTATTTCTTTGGGAAGCCAAGGAGGTTGTTGGTGGTGGAAGGGAGGAAGATCACCAAAGAGATTTTTGGCGTCGTGGTTAAGATTTTGTTGAAGGAAGGGAATCTGGTGGCTGCTGTCTGTGCTGTTTTGGGTTATTTTGCACTTTTTAGGAAGACTAACGAGAGTTAG

Coding sequence (CDS)

ATGGCAGACAATAAGGAAGAAGAACCAGAAACAGCCCCACCACAACAAGCAATACCCAAATCTTATTCATTGTTTATGAAAGTTATGAGCAAAAGAAGAACATGGGTATGTTTATTTGTTCTAGTTTATGCTCTTCTTTTGTCATCTTCTTGGAATTTTCTTGTTTCTATATTGTCTTGGTATAAATCCCAAGTGGAAGCTTCTTCTTCTTCATTTGGGTGGCCTGCAATTTATGCTTCTTTGCTTCTTGGAGGTGTTTTTGGGGTTATTTCAATGGTGGCTGCACTGGCTGTGATGATTCCTGCTACACTTGTCACTTGGATTGCCATTGTTGTGTTGCTTTATTTCTTTGGGAAGCCAAGGAGGTTGTTGGTGGTGGAAGGGAGGAAGATCACCAAAGAGATTTTTGGCGTCGTGGTTAAGATTTTGTTGAAGGAAGGGAATCTGGTGGCTGCTGTCTGTGCTGTTTTGGGTTATTTTGCACTTTTTAGGAAGACTAACGAGAGTTAG

Homology

[Close]

BLAST of CSPI07G04680 vs. TrEMBL
Match: A0A0A0K1T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048040 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 4.1e-83
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW
Sbjct: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP
Sbjct: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
           RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of CSPI07G04680 vs. TrEMBL
Match: W9QTB5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004790 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-58
Identity = 125/167 (74.85%), Postives = 145/167 (86.83%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MADN EEE      Q+  P SY+LF++VMSKRRTW+C+FVLVYA++L+SSWNFL SILSW
Sbjct: 1   MADNLEEE------QERTPSSYTLFLRVMSKRRTWLCIFVLVYAIILTSSWNFLKSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           Y  Q ++SSS+ GWPA+YAS+LLG VFGV+SMVAALAV++PATLVTWIAIVVLL FFGKP
Sbjct: 61  YNLQSKSSSSTSGWPALYASVLLGAVFGVVSMVAALAVVVPATLVTWIAIVVLLAFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTN 168
           RR LVVEGRKIT+EI G V+KILLKEGN+VAAVCAVLGYFAL RK N
Sbjct: 121 RRDLVVEGRKITREIVGFVLKILLKEGNVVAAVCAVLGYFALVRKNN 161

[Close]

BLAST of CSPI07G04680 vs. TrEMBL
Match: M5W010_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012505mg PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.8e-57
Identity = 119/168 (70.83%), Postives = 143/168 (85.12%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MAD  E+E ET PP+      Y +F+  MSKRRTWVCLFVLVYA+LL+S WNFL SILSW
Sbjct: 1   MADTTEDEQETPPPRSY----YMMFLTTMSKRRTWVCLFVLVYAILLTSLWNFLKSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           Y+ Q + S+SS+GWPA+YAS+LLG VFG++SM AALAV++PATLVTWI IVV+L FFGKP
Sbjct: 61  YELQAQPSASSYGWPALYASVLLGAVFGLLSMFAALAVVVPATLVTWITIVVMLAFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 169
           R  LVVEGRKIT+EIFG+V++ILLKEGNLVAA CAVLGYFALFR+++E
Sbjct: 121 RSTLVVEGRKITREIFGIVIRILLKEGNLVAAACAVLGYFALFRRSSE 164

[Close]

BLAST of CSPI07G04680 vs. TrEMBL
Match: A0A061E501_THECC (Pyrroline-5-carboxylate reductase 1 OS=Theobroma cacao GN=TCM_008118 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.0e-54
Identity = 118/157 (75.16%), Postives = 134/157 (85.35%), Query Frame = 1


Query: 11  TAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYKSQVEASSS 70
           T PP    P SY LF+KVMSKRRTWV LFVLVYA+LL+SSWN L SILSWYK Q + SS+
Sbjct: 15  TTPPP---PSSYKLFLKVMSKRRTWVFLFVLVYAILLASSWNSLKSILSWYKRQAQPSSA 74

Query: 71  SFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKPRRLLVVEGRK 130
           S GWPA+YAS+LLG VFG++SMVAALAV +PATLVTWI +VVLL FFGKP+R LV+EGRK
Sbjct: 75  SSGWPALYASVLLGAVFGLLSMVAALAVAVPATLVTWITVVVLLAFFGKPKRTLVLEGRK 134

Query: 131 ITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTN 168
           IT+EI G+V KILLKEGNLVAAVCAVLGYFAL RK +
Sbjct: 135 ITREIAGIVFKILLKEGNLVAAVCAVLGYFALVRKNS 168

[Close]

BLAST of CSPI07G04680 vs. TrEMBL
Match: B9RVY9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174240 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.7e-53
Identity = 116/167 (69.46%), Postives = 136/167 (81.44%), Query Frame = 1


Query: 3   DNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYK 62
           +++EE   T   QQ    +YSLF+ VMSKRRTWVCLFVLVY +LLSSSWN L S+LSWYK
Sbjct: 2   ESQEEVEATRIQQQQPSSTYSLFITVMSKRRTWVCLFVLVYTILLSSSWNLLKSVLSWYK 61

Query: 63  SQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKPRR 122
            Q + ++SS GWPA+YAS+LLG VFG++SMVAALAV +PATLV WI +VVLL FFGKPRR
Sbjct: 62  EQSQVATSS-GWPALYASVLLGAVFGLLSMVAALAVAVPATLVIWITVVVLLAFFGKPRR 121

Query: 123 LLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
            LV+EGRKIT+EI G V KILLKEGN VAAVCAVLGYFAL R+  E+
Sbjct: 122 ALVIEGRKITREIIGFVFKILLKEGNFVAAVCAVLGYFALVRRNYEA 167

[Close]

BLAST of CSPI07G04680 vs. TAIR10
Match: AT1G03730.1 (AT1G03730.1 unknown protein)

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-51
Identity = 103/151 (68.21%), Postives = 124/151 (82.12%), Query Frame = 1


Query: 19  PKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYKSQVEASSSSFGWPAIY 78
           P+SY +FM++MSKRRTWVCLFV VYA+LL+SSWNFL S+LSWYK Q  +S S    PA+Y
Sbjct: 16  PRSYLIFMRIMSKRRTWVCLFVAVYAILLASSWNFLTSVLSWYKLQYTSSPSPSRLPAVY 75

Query: 79  ASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKPRRLLVVEGRKITKEIFGV 138
           AS++LG VFG +SMVAA AV +PA +V WI++VVLL FFGK RR+LVVE RKIT+E+FG 
Sbjct: 76  ASVVLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFGKSRRVLVVEARKITREVFGF 135

Query: 139 VVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
           V K+LLKEGN VAAVCAVLGYF L RK  +S
Sbjct: 136 VFKVLLKEGNAVAAVCAVLGYFILIRKDFDS 166

[Close]

BLAST of CSPI07G04680 vs. TAIR10
Match: AT4G03600.1 (AT4G03600.1 unknown protein)

HSP 1 Score: 183.7 bits (465), Expect = 9.3e-47
Identity = 95/158 (60.13%), Postives = 124/158 (78.48%), Query Frame = 1


Query: 15  QQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYKSQVEASSSSFG- 74
           Q   P+SY +F+ +MSKRRTWVCLF+ VYA+L+SSSWN L S+L+WYK Q  +S+S +  
Sbjct: 4   QTESPRSYHIFITIMSKRRTWVCLFIAVYAILVSSSWNLLRSVLNWYKLQYTSSNSDYSP 63

Query: 75  --WPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKPRRLLVVEGRKI 134
              PA+YAS++LG +FG +SMVAA+ V +PA +V WI++VVLL FFGK RR+LVVEGRKI
Sbjct: 64  SRLPAVYASVVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVEGRKI 123

Query: 135 TKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
           T+E+ G V K+LLKEGN+VAA CAVL YF L R+  +S
Sbjct: 124 TREVVGFVFKVLLKEGNVVAAFCAVLAYFLLIRRDFDS 161

[Close]

BLAST of CSPI07G04680 vs. TAIR10
Match: AT4G28330.1 (AT4G28330.1 unknown protein)

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-42
Identity = 95/169 (56.21%), Postives = 122/169 (72.19%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MAD  +EEPET         SY LF++V+SKRRTW CLF++VYA+LLSSSWN L SI++W
Sbjct: 1   MAD--KEEPETMT-------SYKLFLRVISKRRTWACLFLVVYAILLSSSWNSLNSIVNW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           Y    + SS   G PAIYAS+LLG VFGV+SM AAL + +PA +V WI++VV + F GK 
Sbjct: 61  YGENHQTSS---GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAGKS 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
           R+ +V+EGRK+TKEI G V ++LLKEGN VA +CA+L YF  F   + S
Sbjct: 121 RKRVVIEGRKVTKEIAGFVFRVLLKEGNFVALLCALLAYFVFFNSYSSS 157

[Close]

BLAST of CSPI07G04680 vs. TAIR10
Match: AT4G28340.1 (AT4G28340.1 unknown protein)

HSP 1 Score: 158.3 bits (399), Expect = 4.2e-39
Identity = 92/163 (56.44%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MAD +E+E  T         SY LF++V+SKRRTWVCLF++VYA+LLSSS N L SI++W
Sbjct: 1   MADKEEQETMT---------SYKLFLRVISKRRTWVCLFLVVYAVLLSSSRNSLNSIVNW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           Y    + SS   G PAIYAS+LLG VFGV+SM AAL + +PA +V WI++VV + F  K 
Sbjct: 61  YGENHQTSS---GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPVKS 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALF 164
           R+ +V+EGRK+TKEI G V K+LLKEGN VA +CAV+ YF  F
Sbjct: 121 RKKVVIEGRKVTKEIAGYVFKVLLKEGNFVALLCAVIAYFVFF 151

[Close]

BLAST of CSPI07G04680 vs. NCBI nr
Match: gi|778724087|ref|XP_011658746.1| (PREDICTED: uncharacterized protein LOC101207711 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 5.8e-83
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW
Sbjct: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP
Sbjct: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
           RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of CSPI07G04680 vs. NCBI nr
Match: gi|659110604|ref|XP_008455313.1| (PREDICTED: uncharacterized protein LOC103495508 [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 165/169 (97.63%), Postives = 168/169 (99.41%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MADNKEE+PETAPPQQAIPKSYSL M+VMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP
Sbjct: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
           RRLLVVEGRKITKEIFGVV+KILLKEGNLVAAVCAVLGYFALFRKTNES
Sbjct: 121 RRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of CSPI07G04680 vs. NCBI nr
Match: gi|703073465|ref|XP_010089554.1| (hypothetical protein L484_004790 [Morus notabilis])

HSP 1 Score: 232.6 bits (592), Expect = 5.0e-58
Identity = 125/167 (74.85%), Postives = 145/167 (86.83%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MADN EEE      Q+  P SY+LF++VMSKRRTW+C+FVLVYA++L+SSWNFL SILSW
Sbjct: 1   MADNLEEE------QERTPSSYTLFLRVMSKRRTWLCIFVLVYAIILTSSWNFLKSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           Y  Q ++SSS+ GWPA+YAS+LLG VFGV+SMVAALAV++PATLVTWIAIVVLL FFGKP
Sbjct: 61  YNLQSKSSSSTSGWPALYASVLLGAVFGVVSMVAALAVVVPATLVTWIAIVVLLAFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTN 168
           RR LVVEGRKIT+EI G V+KILLKEGN+VAAVCAVLGYFAL RK N
Sbjct: 121 RRDLVVEGRKITREIVGFVLKILLKEGNVVAAVCAVLGYFALVRKNN 161

[Close]

BLAST of CSPI07G04680 vs. NCBI nr
Match: gi|470134623|ref|XP_004303147.1| (PREDICTED: uncharacterized protein LOC101293408 [Fragaria vesca subsp. vesca])

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-57
Identity = 124/169 (73.37%), Postives = 143/169 (84.62%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MADN EEE + APP    P  Y +F+++MSKRRTWVC+FVLVYA+LL+SSWNFL SILSW
Sbjct: 1   MADNNEEEQDAAPP----PSYYLVFLRIMSKRRTWVCIFVLVYAILLTSSWNFLKSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           YK Q   S SS GWPA+YAS+LLG VFG++SM AALAV++PATLVTWIAIVVLL FFGKP
Sbjct: 61  YKLQGLPSPSSSGWPALYASVLLGAVFGLLSMFAALAVLVPATLVTWIAIVVLLAFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNES 170
           RR LVVEGRKIT+EI  +V KILLKEGNLVAAVCAVLGYFALFR+ + +
Sbjct: 121 RRALVVEGRKITREIVVIVFKILLKEGNLVAAVCAVLGYFALFRRNSNA 165

[Close]

BLAST of CSPI07G04680 vs. NCBI nr
Match: gi|595790367|ref|XP_007198936.1| (hypothetical protein PRUPE_ppa012505mg [Prunus persica])

HSP 1 Score: 229.2 bits (583), Expect = 5.5e-57
Identity = 119/168 (70.83%), Postives = 143/168 (85.12%), Query Frame = 1


Query: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60
           MAD  E+E ET PP+      Y +F+  MSKRRTWVCLFVLVYA+LL+S WNFL SILSW
Sbjct: 1   MADTTEDEQETPPPRSY----YMMFLTTMSKRRTWVCLFVLVYAILLTSLWNFLKSILSW 60

Query: 61  YKSQVEASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFFGKP 120
           Y+ Q + S+SS+GWPA+YAS+LLG VFG++SM AALAV++PATLVTWI IVV+L FFGKP
Sbjct: 61  YELQAQPSASSYGWPALYASVLLGAVFGLLSMFAALAVVVPATLVTWITIVVMLAFFGKP 120

Query: 121 RRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 169
           R  LVVEGRKIT+EIFG+V++ILLKEGNLVAA CAVLGYFALFR+++E
Sbjct: 121 RSTLVVEGRKITREIFGIVIRILLKEGNLVAAACAVLGYFALFRRSSE 164

The following BLAST results are available for this feature:

BLAST of CSPI07G04680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G04680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1T7_CUCSA	4.1e-83	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048040 PE=4 SV=1	[more]
W9QTB5_9ROSA	3.5e-58	74.85	Uncharacterized protein OS=Morus notabilis GN=L484_004790 PE=4 SV=1	[more]
M5W010_PRUPE	3.8e-57	70.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012505mg PE=4 SV=1	[more]
A0A061E501_THECC	4.0e-54	75.16	Pyrroline-5-carboxylate reductase 1 OS=Theobroma cacao GN=TCM_008118 PE=4 SV=1	[more]
B9RVY9_RICCO	9.7e-53	69.46	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174240 PE=4 SV=1	[more]

BLAST of CSPI07G04680 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03730.1	2.1e-51	68.21	unknown protein	[more]
AT4G03600.1	9.3e-47	60.13	unknown protein	[more]
AT4G28330.1	5.3e-42	56.21	unknown protein	[more]
AT4G28340.1	4.2e-39	56.44	unknown protein	[more]

BLAST of CSPI07G04680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724087\|ref\|XP_011658746.1\|	5.8e-83	100.00	PREDICTED: uncharacterized protein LOC101207711 [Cucumis sativus]	[more]
gi\|659110604\|ref\|XP_008455313.1\|	1.9e-81	97.63	PREDICTED: uncharacterized protein LOC103495508 [Cucumis melo]	[more]
gi\|703073465\|ref\|XP_010089554.1\|	5.0e-58	74.85	hypothetical protein L484_004790 [Morus notabilis]	[more]
gi\|470134623\|ref\|XP_004303147.1\|	1.1e-57	73.37	PREDICTED: uncharacterized protein LOC101293408 [Fragaria vesca subsp. vesca]	[more]
gi\|595790367\|ref\|XP_007198936.1\|	5.5e-57	70.83	hypothetical protein PRUPE_ppa012505mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G04680.1	CSPI07G04680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34656	FAMILY NOT NAMED	coord: 5..169 score: 4.6E
None	No IPR available	PANTHER	PTHR34656:SF1	SUBFAMILY NOT NAMED	coord: 5..169 score: 4.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G04680	Cla002267	Watermelon (97103) v1	cpiwmB604
CSPI07G04680	Csa7G048040	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G04680	Csa6G127980	Cucumber (Chinese Long) v2	cpicuB353
CSPI07G04680	MELO3C018731	Melon (DHL92) v3.5.1	cpimeB538
CSPI07G04680	MELO3C013623	Melon (DHL92) v3.5.1	cpimeB519
CSPI07G04680	ClCG07G002860	Watermelon (Charleston Gray)	cpiwcgB596
CSPI07G04680	Lsi11G015630	Bottle gourd (USVL1VR-Ls)	cpilsiB505
CSPI07G04680	Lsi10G008990	Bottle gourd (USVL1VR-Ls)	cpilsiB500
CSPI07G04680	MELO3C018731.2	Melon (DHL92) v3.6.1	cpimedB523
CSPI07G04680	MELO3C013623.2	Melon (DHL92) v3.6.1	cpimedB504
CSPI07G04680	CsaV3_6G012890	Cucumber (Chinese Long) v3	cpicucB412
CSPI07G04680	CsaV3_7G004480	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G04680	Cla97C02G043420	Watermelon (97103) v2	cpiwmbB547
CSPI07G04680	Cla97C07G131190	Watermelon (97103) v2	cpiwmbB577
CSPI07G04680	Bhi05G001624	Wax gourd	cpiwgoB673
CSPI07G04680	Cucsa.147610	Cucumber (Gy14) v1	cgycpiB220
CSPI07G04680	Cucsa.119130	Cucumber (Gy14) v1	cgycpiB159
CSPI07G04680	CmaCh11G018800	Cucurbita maxima (Rimu)	cmacpiB144
CSPI07G04680	CmoCh11G019590	Cucurbita moschata (Rifu)	cmocpiB131
CSPI07G04680	CsGy6G010510	Cucumber (Gy14) v2	cgybcpiB298
CSPI07G04680	Carg19125	Silver-seed gourd	carcpiB0755

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI07G04680	CSPI06G10400	Wild cucumber (PI 183967)	cpicpiB191

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G04680	Wax gourd	cpiwgoB694
CSPI07G04680	Wild cucumber (PI 183967)	cpicpiB051
CSPI07G04680	Cucumber (Gy14) v1	cgycpiB176
CSPI07G04680	Cucurbita maxima (Rimu)	cmacpiB429
CSPI07G04680	Cucurbita maxima (Rimu)	cmacpiB533
CSPI07G04680	Cucurbita maxima (Rimu)	cmacpiB579
CSPI07G04680	Cucurbita maxima (Rimu)	cmacpiB650
CSPI07G04680	Cucurbita moschata (Rifu)	cmocpiB419
CSPI07G04680	Cucurbita moschata (Rifu)	cmocpiB524
CSPI07G04680	Cucurbita moschata (Rifu)	cmocpiB643
CSPI07G04680	Watermelon (Charleston Gray)	cpiwcgB569
CSPI07G04680	Watermelon (97103) v1	cpiwmB616
CSPI07G04680	Cucurbita pepo (Zucchini)	cpecpiB257
CSPI07G04680	Cucurbita pepo (Zucchini)	cpecpiB692
CSPI07G04680	Cucurbita pepo (Zucchini)	cpecpiB768
CSPI07G04680	Bottle gourd (USVL1VR-Ls)	cpilsiB521
CSPI07G04680	Melon (DHL92) v3.6.1	cpimedB511
CSPI07G04680	Cucumber (Gy14) v2	cgybcpiB044
CSPI07G04680	Cucumber (Gy14) v2	cgybcpiB332
CSPI07G04680	Silver-seed gourd	carcpiB0034
CSPI07G04680	Silver-seed gourd	carcpiB0176
CSPI07G04680	Silver-seed gourd	carcpiB0911