Carg19125-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
BLAST of Carg19125-RA vs. NCBI nr
Match: XP_023531926.1 (uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 309.7 bits (792), Expect = 6.1e-81 Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Carg19125-RA vs. NCBI nr
Match: XP_022988973.1 (uncharacterized protein LOC111486173 [Cucurbita maxima]) HSP 1 Score: 306.6 bits (784), Expect = 5.2e-80 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Carg19125-RA vs. NCBI nr
Match: XP_022930709.1 (uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata]) HSP 1 Score: 305.4 bits (781), Expect = 1.1e-79 Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Carg19125-RA vs. NCBI nr
Match: XP_022148023.1 (uncharacterized protein LOC111016811 [Momordica charantia]) HSP 1 Score: 275.8 bits (704), Expect = 9.7e-71 Identity = 148/167 (88.62%), Postives = 158/167 (94.61%), Query Frame = 0
BLAST of Carg19125-RA vs. NCBI nr
Match: XP_008455313.1 (PREDICTED: uncharacterized protein LOC103495508 [Cucumis melo]) HSP 1 Score: 273.1 bits (697), Expect = 6.3e-70 Identity = 151/172 (87.79%), Postives = 156/172 (90.70%), Query Frame = 0
BLAST of Carg19125-RA vs. TAIR10
Match: AT1G03730.1 (unknown protein) HSP 1 Score: 190.3 bits (482), Expect = 9.8e-49 Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = 0
BLAST of Carg19125-RA vs. TAIR10
Match: AT4G03600.1 (unknown protein) HSP 1 Score: 181.8 bits (460), Expect = 3.5e-46 Identity = 95/158 (60.13%), Postives = 123/158 (77.85%), Query Frame = 0
BLAST of Carg19125-RA vs. TAIR10
Match: AT4G28330.1 (unknown protein) HSP 1 Score: 167.5 bits (423), Expect = 6.8e-42 Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0
BLAST of Carg19125-RA vs. TAIR10
Match: AT4G28340.1 (unknown protein) HSP 1 Score: 157.1 bits (396), Expect = 9.2e-39 Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of Carg19125-RA vs. TrEMBL
Match: tr|A0A1S3C0S4|A0A1S3C0S4_CUCME (uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 4.2e-70 Identity = 151/172 (87.79%), Postives = 156/172 (90.70%), Query Frame = 0
BLAST of Carg19125-RA vs. TrEMBL
Match: tr|A0A0A0K1T7|A0A0A0K1T7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048040 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 6.0e-69 Identity = 148/172 (86.05%), Postives = 155/172 (90.12%), Query Frame = 0
BLAST of Carg19125-RA vs. TrEMBL
Match: tr|W9QTB5|W9QTB5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004790 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.0e-55 Identity = 125/165 (75.76%), Postives = 142/165 (86.06%), Query Frame = 0
BLAST of Carg19125-RA vs. TrEMBL
Match: tr|A0A2P6RTV5|A0A2P6RTV5_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0126711 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 2.2e-55 Identity = 121/172 (70.35%), Postives = 144/172 (83.72%), Query Frame = 0
BLAST of Carg19125-RA vs. TrEMBL
Match: tr|A0A2N9F0Z5|A0A2N9F0Z5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8423 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 7.9e-53 Identity = 115/150 (76.67%), Postives = 133/150 (88.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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