CsGy6G008680 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G008680
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	U3 small nucleolar RNA-associated protein 14 homolog A
Location	Chr6 : 7217307 .. 7220952 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTCTTTACATAATGAACAACCTCCAAACACTTTGTATTTTATATCCTCTTGTTATTAGTAGTATTATTCATTCCAGTGCATACTCTTTTCTTGATTGATTAATTTAATCCACCACTTTCTTCTTTTTGTTTCCTTCCTTTTCAGATCTTCAATTGGGTGCACAAGACTTTTCATCATTCTCTTCTCAAGGGTTTAATTTCTCTCATTTTATTGCAATTCTTTCTTCCTTTGGGTGTAGGATATATATTTTTAAAAATACATATCTTAGAGTTATGTTCGAAACATAAATTGAATGCTTGATATTTTTCAGAGGGTTTTGCGCAAAATGCGACGAAGAAGAATGAAAGTGTAAGCATTAATGAAGTGGATAGGCATGCATTGTTGAAGCAAGTAGCGTTTGATCGTGTGGAAGCCATTCATGACTGGAGAGATGGCATTCTCACCATTGGCACATTCGGGTTTGAATCATTGAAACCTTCGAACGAGCAAAAGGAGTATTTCATGCTCGAGAGCGAAGAAGACGACTACGAAGACGAGGAAGAAGAGGAAGAGAAATCGTTCGTTCACGATGAAGATGACGACATTATCGGTTACTTGGAAAACGAAGAACTAAACCCTTTGATGTTGAAAGCATTTGGACACAAATCAAAGGATGTAAGTGCTGAGAAAGGTGAAGATGATTTGATCAAATACAATGCAATTATGGAGATGGAGAATGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATTACACTGGCTGATTTGTTCTTAGCTGATGCAAGAGATGTGGCAAAAGTACTTGAGGATGACAAAGTGCTTCAAAAGAAAACAGCTGATGTGAGAAGTAAGAGTGGTCTCTCCTTTGCCAAGAAGTTTATCCCTCGAGTTAAGGAGGATTCACACCCTATTAAGAACTTTCAACGAGTGAGTAACCTTATTATTATTTTTTATTATTGTAGTCTTGTAAAGTTTTGGGCCAATGGATGATTTAACAAGTTTTTAAAATGAATTTCAAAAAACAAGTGTTTGTCTGCAAGTTGCTAAAATCTGATAACGACATTCACTTGGAAATTTGTGTTACGCCACTAAGTTGGGTGAGAAAAAATTGGGTATAGGAGAGCCTAATTAGCCGACAAAGTATTTTTGTGATAGAATTACTAAAATTGTTGTGATTTTGGGAGATGCAGGTTGAAAAAATATTCACCATTTAAAACAAAATTTCAATTTTTTAAACATTCTTAATTGGAAAATGGAGAGTTTATGTTGTTATAAATTCAAAAAAATCACACCAAACACAAAAAGGAATGGTGTAAAAATTAATCCAAAACTTAAATCTTGAAAGATAAAAAGATGGCAACAAAAGCAACCTGAAAATAAAATGATGAATCCATAAGTACAAAACATGCATGTTGGTATTGTTTATAGAAAAGAAGAAAGTAGAATTTATGAAAGAAACAACAAAAAGGAAATTTAAAAAGAAAGAGAGAGAGAAGAAATCATTGAGTTGTTGTATGATTGGGATGCCACGTGTACGTTATGCAGTTGATGAGAAGGATGATGAAGAGGAAGATCCATCCAGAGATTGAAGACAAGGTCATCATCAACAAACCATCATCGTCTGACCTAACAACTCACCAAATAGGAATAATCCCCAACAATGGACCTTTTCAATCCTTTGAATCCATCTCTCTTCTTCCAACTCAAGGTAATTTTTACTTTTTTTTTTTTTATTATTATTATCTTCTCCTTTTCTTTCTTTCCATGAAATAAGAAAAATTATGAACGTTTCTATACTGAAGTTTCCAACTTAAGTTAGTTAAAGGTTATCCAGCCTAGCTAGGGTTTATTTTATCATTTTAGTTATGTTTGTTTGGTAAGCGTTTTATTTAAAGAACTTTTCACTTTTAAGTTTATTGTTTTGAAATCTACTTCTGGTTCATGTATTCAAAATTTTGAAAACTAAAAATAAAGAATTTTTAAAAACAATTTAACTACATACTCATCACTTCGATTATAAATTTTATCTTTTTCAACTTAATTGACTAAGTGATAAAAACGTCCCTTTTTAAAAATTTTAAATTTTGGTTTGATTTTTAAAAACATAACAAAAAGAAAGAAACTAATTATGGGTGAAAAGTTTTAATTTTAAAAAAAAAAATCAAAAACAAAAAATTAAACCTTTATCTAAGTAGATGATCACGTAGATATGTTGAATTGGACACGTTGATTTCTTGAATTAGACTAAAAGGTCAAATCCATCCTAAAGTGTCAAAAACATGGTAGAAATTGAAAAGATGAGAAATGAAAAACAATCAAACCCATCAAAATTGAGTCAATTCTGTGTCTATTTGTCTTTAATAATTACCCAATTCTATCCTATTTTCAAATAACTTTAGAGAACCATAATACAATTGGTTCATTTGATTACAGCTATTTCAACTTTAGTTTTAACCCAAAATCAAATTATATGGATTCACCTAACACTGAAATTTTCACTATGCCAACAACCCTAGCATAGGGTATATCATGGTGAGACTACAAGTGTTCAATGTAGGCCCTAAAAAACATTTGAATAATTTTATCAACTTTTCTCAATTGGACAAATTTCAATCAAAGCTGTATATGGTCAAATGGGATTATTGAAGATTAAACTTGCATATCACATACAGAAAAGTGTCATTATTACTGTCCTTGTATTTTATCCATGTGACATTTGAAATTTAATGGGCCATTTCATCGCAAACAACACAAAAGCAAATTCCAAGTAAGAAACAGTCAAACAAATCAGTCACAAATCTTTTCCTCTGTCATACAATTCTGGCTATTAATTAAATATCGCAAACTCATCTAATCTGGTGGGCTCTCACATGTCTAATCCACTCATACTTCATGCTATTTGATACAGATATATATGTGAATTATTTAGGTTCCCAAAGTCTATTTTTCTTCACATTCTTAAATACATTGTTCTTAAACCCAAGCAAAAACAAGTTTTTGACTGCATCTTCTTTTGACAACTAAGTATAAACGAAAAATTAAATATAATGGTTCAGAAACGAGGTCTTATTTGAATACTCATTTTGGATTGACTTTTTGCTGCTTTAAGTAATCTTTGTTTTACTATTTCTCTTAAGTGTAATTAGAAAATGCCTCCTTATAATGGGGAATTATTATATACATAGCAAAAAGAAACTAGTAAAAAAAAAAATTCAAATGAGAGAGTGTGTGATGGATTTTAATTACTATATTTTTTAAAATTGTTTCAATATTATATTTTACTATTATAAGTTTGTTTTTGTTTAGTCACTAATTGGTTTTTTTCTTTCTAATTTGGTGTGTTTACTTAGGTGCAGATGCAATTGCGTGATGGATTTAATGGATGGATGTATTTGAAATTAATGAGTTGTGTTTAATTATCTCTTATGGTAATTTGTTGAAAACAATGTTTATTTATTATTTTTGTTCATTAGGTGTTTATTGTATATGGAGCTTTTTAATTAAGACTACTTGTAAGTTGTAAGTTGTTTTGATGTTGTTTTTGGGTTTAGCAAACAAAGTCGTGGAATTGTGGTTTGTGGGTCAGTTCTTGGCGTTTCTCTACTTCCTCAAATTTATTCATTTCCAATCAATATATCTTCAC

mRNA sequence

ATGAAGATCTTCAATTGGGTGCACAAGACTTTTCATCATTCTCTTCTCAAGGAGGGTTTTGCGCAAAATGCGACGAAGAAGAATGAAAGTGTAAGCATTAATGAAGTGGATAGGCATGCATTGTTGAAGCAAGTAGCGTTTGATCGTGTGGAAGCCATTCATGACTGGAGAGATGGCATTCTCACCATTGGCACATTCGGGTTTGAATCATTGAAACCTTCGAACGAGCAAAAGGAGTATTTCATGCTCGAGAGCGAAGAAGACGACTACGAAGACGAGGAAGAAGAGGAAGAGAAATCGTTCGTTCACGATGAAGATGACGACATTATCGGTTACTTGGAAAACGAAGAACTAAACCCTTTGATGTTGAAAGCATTTGGACACAAATCAAAGGATGTAAGTGCTGAGAAAGGTGAAGATGATTTGATCAAATACAATGCAATTATGGAGATGGAGAATGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATTACACTGGCTGATTTGTTCTTAGCTGATGCAAGAGATGTGGCAAAAGTACTTGAGGATGACAAAGTGCTTCAAAAGAAAACAGCTGATGTGAGAAGTAAGAGTGGTCTCTCCTTTGCCAAGAAGTTTATCCCTCGAGTTAAGGAGGATTCACACCCTATTAAGAACTTTCAACGATTGATGAGAAGGATGATGAAGAGGAAGATCCATCCAGAGATTGAAGACAAGGTCATCATCAACAAACCATCATCGTCTGACCTAACAACTCACCAAATAGGAATAATCCCCAACAATGGACCTTTTCAATCCTTTGAATCCATCTCTCTTCTTCCAACTCAAGGTGCAGATGCAATTGCGTGATGGATTTAATGGATGGATGTATTTGAAATTAATGAGTTGTGTTTAATTATCTCTTATGGTAATTTGTTGAAAACAATGTTTATTTATTATTTTTGTTCATTAGGTGTTTATTGTATATGGAGCTTTTTAATTAAGACTACTTGTAAGTTGTAAGTTGTTTTGATGTTGTTTTTGGGTTTAGCAAACAAAGTCGTGGAATTGTGGTTTGTGGGTCAGTTCTTGGCGTTTCTCTACTTCCTCAAATTTATTCATTTCCAATCAATATATCTTCAC

Coding sequence (CDS)

ATGAAGATCTTCAATTGGGTGCACAAGACTTTTCATCATTCTCTTCTCAAGGAGGGTTTTGCGCAAAATGCGACGAAGAAGAATGAAAGTGTAAGCATTAATGAAGTGGATAGGCATGCATTGTTGAAGCAAGTAGCGTTTGATCGTGTGGAAGCCATTCATGACTGGAGAGATGGCATTCTCACCATTGGCACATTCGGGTTTGAATCATTGAAACCTTCGAACGAGCAAAAGGAGTATTTCATGCTCGAGAGCGAAGAAGACGACTACGAAGACGAGGAAGAAGAGGAAGAGAAATCGTTCGTTCACGATGAAGATGACGACATTATCGGTTACTTGGAAAACGAAGAACTAAACCCTTTGATGTTGAAAGCATTTGGACACAAATCAAAGGATGTAAGTGCTGAGAAAGGTGAAGATGATTTGATCAAATACAATGCAATTATGGAGATGGAGAATGAGGAGGAGAAGAAGAAAGGGGAGAGGAGAATTACACTGGCTGATTTGTTCTTAGCTGATGCAAGAGATGTGGCAAAAGTACTTGAGGATGACAAAGTGCTTCAAAAGAAAACAGCTGATGTGAGAAGTAAGAGTGGTCTCTCCTTTGCCAAGAAGTTTATCCCTCGAGTTAAGGAGGATTCACACCCTATTAAGAACTTTCAACGATTGATGAGAAGGATGATGAAGAGGAAGATCCATCCAGAGATTGAAGACAAGGTCATCATCAACAAACCATCATCGTCTGACCTAACAACTCACCAAATAGGAATAATCCCCAACAATGGACCTTTTCAATCCTTTGAATCCATCTCTCTTCTTCCAACTCAAGGTGCAGATGCAATTGCGTGA

Protein sequence

MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGILTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEEKSFVHDEDDDIIGYLENEELNPLMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA

Homology

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BLAST of CsGy6G008680 vs. NCBI nr
Match: XP_004140615.1 (PREDICTED: uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus] >KGN46544.1 hypothetical protein Csa_6G107930 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 1.8e-130
Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVD HALLKQVAFDRVE IHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120
           LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV
Sbjct: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 283
           IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA
Sbjct: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 282

[Close]

BLAST of CsGy6G008680 vs. NCBI nr
Match: XP_011656860.1 (PREDICTED: uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus])

HSP 1 Score: 466.1 bits (1198), Expect = 8.6e-128
Identity = 278/282 (98.58%), Postives = 278/282 (98.58%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVD HALLKQVAFDRVE IHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120
           LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV
Sbjct: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 283
           IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQ  DAIA
Sbjct: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQ--DAIA 280

[Close]

BLAST of CsGy6G008680 vs. NCBI nr
Match: XP_008459743.1 (PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 7.0e-122
Identity = 262/282 (92.91%), Postives = 265/282 (93.97%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQ+ATKKNESV INEVDRHALLKQVAFD VEAIHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120
           LTIGTFGFESLKPSNE        XXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNE-QKEYFALXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LM KAFGHKSKDVS EKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAK 
Sbjct: 121 LMFKAFGHKSKDVSVEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKA 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPE+EDK+
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEVEDKI 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 283
           IINKP SSDL THQIGIIPNNGPFQSFESISLLPTQ  DAIA
Sbjct: 241 IINKP-SSDLITHQIGIIPNNGPFQSFESISLLPTQ--DAIA 278

[Close]

BLAST of CsGy6G008680 vs. NCBI nr
Match: XP_022958918.1 (adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058.1 adoMet-dependent rRNA methyltransferase SPB1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.3 bits (856), Expect = 3.9e-88
Identity = 219/294 (74.49%), Postives = 239/294 (81.29%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60

Query: 61  LTIGTFGFESLKPSN---EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEE 120
           LTIGTFGFESLKPSN   E    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++++EE
Sbjct: 61  LTIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDDEE 120

Query: 121 LNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180
           LNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180

Query: 181 ADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240
           ADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240

Query: 241 MMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADA 281
           M+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP Q A A
Sbjct: 241 MLKRKIHPEIEDK--INKASSSD-QTHQIG-TPNHEGFEGFEALSLLPIQDAVA 289

[Close]

BLAST of CsGy6G008680 vs. NCBI nr
Match: XP_023006624.1 (eukaryotic translation initiation factor 5B [Cucurbita maxima])

HSP 1 Score: 334.0 bits (855), Expect = 5.1e-88
Identity = 219/296 (73.99%), Postives = 240/296 (81.08%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNE-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLEN 120
           LTIGTFGFESLKPSN+        XXXXXXXXXXXXXXXXXXXXXXXXXXXXX I ++++
Sbjct: 61  LTIGTFGFESLKPSNKQMEYLVLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDFVDD 120

Query: 121 EELNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRI 180
           EELNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRI
Sbjct: 121 EELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRI 180

Query: 181 TLADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLM 240
           TLADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLM
Sbjct: 181 TLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLM 240

Query: 241 RRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADA 281
           RRM+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP Q A A
Sbjct: 241 RRMLKRKIHPEIEDK--INKASSSD-QTHQIG-TPNHEGFEGFEALSLLPIQDAVA 291

[Close]

BLAST of CsGy6G008680 vs. TAIR10
Match: AT2G46640.3 (unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 78/275 (28.36%), Postives = 122/275 (44.36%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKE--GFAQNATKK-NESVSINEVDRHALLKQVAFDRVEAIHDWR 60
           M IFNWV K  H +++KE  G  +N  KK NE +S  E +  A+L QV    V+A+ +W 
Sbjct: 1   MTIFNWVQKKLHQNVIKEIDGVRKNEKKKRNEGISEIEKNTKAILDQVGL--VDALDNWF 60

Query: 61  DGILTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIG-----Y 120
           DG+LTIGTFGF++L    E                                 I      Y
Sbjct: 61  DGVLTIGTFGFDTLNFKEEDEMDDDECGSGDLDYVVIDGSIIKNVDQESDPLISVENKFY 120

Query: 121 LENEELNPLMLKA----FGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLAD 180
             +E++  L ++A    FG      S +  E   +   A  E E E +KK    R TLA+
Sbjct: 121 DHHEDVGNLYVQADTDHFG------SIKTAETPAV--TAAAEAEIEPQKK----RTTLAE 180

Query: 181 LFL-------------------ADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPR 240
           LF+                    D  +V    ++   L K+ + V+ K  +S +K+    
Sbjct: 181 LFMEDHDKGYDTWHCKKPNNPNLDGEEVKYYKQNGSKLSKRFSFVKKKLVMSKSKE---- 240

Query: 241 VKEDSHPIKNFQRLMRRMMKRKIHPEIEDKVIINK 245
            + D  PIK  +++++RM+K+KIHP+++    + K
Sbjct: 241 EENDLRPIKKMRQMIKRMLKKKIHPDVDATKALKK 257

[Close]

BLAST of CsGy6G008680 vs. TrEMBL
Match: tr|A0A0A0KCK2|A0A0A0KCK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.2e-130
Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVD HALLKQVAFDRVE IHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120
           LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV
Sbjct: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 283
           IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA
Sbjct: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 282

[Close]

BLAST of CsGy6G008680 vs. TrEMBL
Match: tr|A0A1S3CAZ2|A0A1S3CAZ2_CUCME (U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 GN=LOC103498785 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 4.7e-122
Identity = 262/282 (92.91%), Postives = 265/282 (93.97%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHKTFHHSLLKEGFAQ+ATKKNESV INEVDRHALLKQVAFD VEAIHDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120
           LTIGTFGFESLKPSNE        XXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP
Sbjct: 61  LTIGTFGFESLKPSNE-QKEYFALXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELNP 120

Query: 121 LMLKAFGHKSKDVSAEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKV 180
           LM KAFGHKSKDVS EKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAK 
Sbjct: 121 LMFKAFGHKSKDVSVEKGEDDLIKYNAIMEMENEEEKKKGERRITLADLFLADARDVAKA 180

Query: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEIEDKV 240
           LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPE+EDK+
Sbjct: 181 LEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRRMMKRKIHPEVEDKI 240

Query: 241 IINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADAIA 283
           IINKP SSDL THQIGIIPNNGPFQSFESISLLPTQ  DAIA
Sbjct: 241 IINKP-SSDLITHQIGIIPNNGPFQSFESISLLPTQ--DAIA 278

[Close]

BLAST of CsGy6G008680 vs. TrEMBL
Match: tr|A0A2P4KRW0|A0A2P4KRW0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37650 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-48
Identity = 170/303 (56.11%), Postives = 201/303 (66.34%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHK FHH++LKEG A+N  K  ES + N  D+ ALLKQVA    E +  WRDGI
Sbjct: 1   MKIFNWVHKRFHHTVLKEGLARN-VKTTESTT-NNSDKQALLKQVAL--AEVLDGWRDGI 60

Query: 61  LTIGTFGFESLKPSNE--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEEL 120
           LTIGTFGF+ LKP N+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    ++EEL
Sbjct: 61  LTIGTFGFDPLKPFNQQKEYLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHEEL 120

Query: 121 NPLMLKAFGHKSKDVSAEKGED------DLI-----------KYNAIMEMENEEEKKKGE 180
           NPLM   F H  +D+ +    D      D+I           +Y+ +   E EE+KKKGE
Sbjct: 121 NPLMFTTFEHNFEDLESNFDHDINVCKPDVIMTVDGVPLTPPEYDELDNREGEEKKKKGE 180

Query: 181 RRITLADLFLADARDVAKVLEDDKVLQ---KKTADVRSKSGLSFAKKFIPRV---KEDSH 240
            RITLADLFLADA DV + L+ D       KKT  +R+K+GLSFAKKFIPRV   KEDS 
Sbjct: 181 -RITLADLFLADA-DVKEKLDPDHFFPNSGKKTV-LRTKNGLSFAKKFIPRVKGAKEDSS 240

Query: 241 PIKNFQRLMRRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPT 279
           PIKN QRLMR+M+KRKIHPE E K+      S   T  + G+I N+    S ES++LLPT
Sbjct: 241 PIKNLQRLMRKMLKRKIHPEFEVKI----HKSESQTPGETGVITNDEHGVS-ESVTLLPT 291

[Close]

BLAST of CsGy6G008680 vs. TrEMBL
Match: tr|U3MMQ4|U3MMQ4_PRUPE (TAC1 OS=Prunus persica OX=3760 GN=PRUPE_2G194000 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.4e-43
Identity = 142/307 (46.25%), Postives = 184/307 (59.93%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHK  H  ++K+GFA N   K   +  N+ D  A LKQV    V+ +  WRDGI
Sbjct: 1   MKIFNWVHKRLHQRVVKDGFAGNV--KKSELETNDKDTQAFLKQVGLVNVDGLDGWRDGI 60

Query: 61  LTIGTFGFESLKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGY-LENEELN 120
           LTIGTFGF+ LKPS           XXXXXXXXXXXXXXXXXXXXXXXX  + +E+EELN
Sbjct: 61  LTIGTFGFDPLKPSTHQNEYFVLESXXXXXXXXXXXXXXXXXXXXXXXXXXHSVEDEELN 120

Query: 121 PLMLKAFGHKSKDVSA------EKGEDDLIKYNAIM---------------EMENEEEKK 180
           PLM   F H  +D+ +      +K  D ++  + +                +  N++ K 
Sbjct: 121 PLMFTTFEHSFEDIGSNFDAIVQKPADVILTVDGVPLTPFEGSSEISTKPDQSANDQSKN 180

Query: 181 KGERRITLADLFLADARDVAKVLEDDKVLQ---KKTADVRSKSGLSFAKKFIPRVKEDSH 240
           K  +RITLADLF AD  DV ++  D   +Q   +K  + R++SGL+FAKK IPRVK+DS 
Sbjct: 181 KKGQRITLADLFQADVPDVGQLKLDSGKVQPEMEKKMNARTRSGLAFAKKLIPRVKDDSS 240

Query: 241 PIKNFQRLMRRMMKRKIHP-EIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLP 282
           PIKN QRLMRRM+KRKIHP E+E K+  +           I  + N+    ++ES+SLLP
Sbjct: 241 PIKNMQRLMRRMLKRKIHPAELEVKIHKSDGQKQPSAVELISNVEND----AYESVSLLP 300

[Close]

BLAST of CsGy6G008680 vs. TrEMBL
Match: tr|A0A2N9IRQ4|A0A2N9IRQ4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54876 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.8e-42
Identity = 152/302 (50.33%), Postives = 186/302 (61.59%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDRHALLKQVAFDRVEAIHDWRDGI 60
           MKIFNWVHK FHH++LK+GFA++   K   ++ N  D+ ALLKQVA    + +  WRDGI
Sbjct: 1   MKIFNWVHKRFHHTVLKDGFARSV--KTTELTTNNTDKQALLKQVAL--ADVLDGWRDGI 60

Query: 61  LTIGTFGFES-LKPSNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLENEELN 120
           LTIGT G E+ LKP N+         XXXXXXXXXXXXXXXXXXXXXXXX          
Sbjct: 61  LTIGTLGLENPLKPFNQQNEYLILESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 PLMLKAFGHKSKDVSAEKGEDDLIKYNAIM------------------EMEN-----EEE 180
           PLM   FGH  +D  +    D++ K + IM                  E++N     E++
Sbjct: 121 PLMFTTFGHNFEDFESNPDHDNVHKPDVIMTVDGVSLTPYLGSPELNVELDNMEGSGEQK 180

Query: 181 KKKGERRITLADLFLADARDVAKVLEDDKVLQK--KTADVRSKSGLSFAKKFIPRVKEDS 240
           KKKGE RITLADLFLADA DV + L+ D+V     K   +R+K+GLSFAKKFIPRVKEDS
Sbjct: 181 KKKGE-RITLADLFLADA-DVKEKLKPDQVYPNSGKKPVLRTKNGLSFAKKFIPRVKEDS 240

Query: 241 HPIKNFQRLMRRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLP 277
            PIKN QRLM+RM+KRKIHPE E K+      S      + G+I  +G     ES +LLP
Sbjct: 241 TPIKNLQRLMKRMLKRKIHPEFEVKM----HKSDGEKPGETGLI-IDGEHGVSESDNLLP 291

The following BLAST results are available for this feature:

BLAST of CsGy6G008680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140615.1	1.8e-130	99.29	PREDICTED: uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus] >KG...	[more]
XP_011656860.1	8.6e-128	98.58	PREDICTED: uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus]	[more]
XP_008459743.1	7.0e-122	92.91	PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A [Cucumis melo]	[more]
XP_022958918.1	3.9e-88	74.49	adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058....	[more]
XP_023006624.1	5.1e-88	73.99	eukaryotic translation initiation factor 5B [Cucurbita maxima]	[more]

BLAST of CsGy6G008680 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46640.3	1.8e-15	28.36	unknown protein	[more]

BLAST of CsGy6G008680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G008680 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCK2\|A0A0A0KCK2_CUCSA	1.2e-130	99.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1	[more]
tr\|A0A1S3CAZ2\|A0A1S3CAZ2_CUCME	4.7e-122	92.91	U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A2P4KRW0\|A0A2P4KRW0_QUESU	9.9e-48	56.11	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37650 PE=4 SV=1	[more]
tr\|U3MMQ4\|U3MMQ4_PRUPE	7.4e-43	46.25	TAC1 OS=Prunus persica OX=3760 GN=PRUPE_2G194000 PE=4 SV=1	[more]
tr\|A0A2N9IRQ4\|A0A2N9IRQ4_FAGSY	4.8e-42	50.33	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54876 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G008680.1	CsGy6G008680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38366	FAMILY NOT NAMED	coord: 1..248

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G008680	Cla006689	Watermelon (97103) v1	cgybwmB509
CsGy6G008680	Csa6G107930	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G008680	MELO3C022248	Melon (DHL92) v3.5.1	cgybmeB381
CsGy6G008680	ClCG06G002790	Watermelon (Charleston Gray)	cgybwcgB438
CsGy6G008680	CSPI06G08580	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G008680	CmaCh17G005010	Cucurbita maxima (Rimu)	cgybcmaB763
CsGy6G008680	CmoCh17G004740	Cucurbita moschata (Rifu)	cgybcmoB744
CsGy6G008680	Lsi09G016550	Bottle gourd (USVL1VR-Ls)	cgyblsiB364
CsGy6G008680	Cp4.1LG12g04310	Cucurbita pepo (Zucchini)	cgybcpeB732
CsGy6G008680	MELO3C022248.2	Melon (DHL92) v3.6.1	cgybmedB385
CsGy6G008680	CsaV3_6G008960	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G008680	Cla97C06G112160	Watermelon (97103) v2	cgybwmbB446
CsGy6G008680	Bhi12G001939	Wax gourd	cgybwgoB522
CsGy6G008680	Carg26675	Silver-seed gourd	carcgybB0888

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G008680	Bottle gourd (USVL1VR-Ls)	cgyblsiB366