Carg26675 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26675
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NAD-dependent protein deacetylase HST1-like protein
Location	Cucurbita_argyrosperma_scaffold_268 : 194677 .. 196982 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTAACTCACAATCTTTCAACCAAAATGAAGGTCTTTACGTCCCTCTAACCCTACTCTTTCCATTTTCTTCATACTCTCTTTATTCATTTATTCACCACTTTCTTTCTTACTTCAGATCTTCAACTGGGTGCACAAGACTTTTCATCACACCGCTCTCAAGGGTTTCTCTCTCATACGTCTCATTTTACTTCAATTTTTCATAGAGATCGAAAAAAAATAACTTTTTATACGTACAACTATTTCAATTTTGAATTGTTCCAAGAGTTCAACGATTGCCGAGGTGCAAGATCGATCCATCTAACTTTTAAGATTGTTATTTTTTCTAGAGGGTTATACTCAAAATGCGACGAAGAAGACCGAAACCGCAATCATTAATGAAGTGGACAGGCAAGCATTGTTGAAGCAAGTAGATCTTGATGTGGAAGCCCTTCATGACTGGAGAGATGGCATTCTCACCATTGGTACATTCGGGTTCGAATCATTGAAACCATCGAACAAGCAAATGGAGTATCTCGTACTCAAGAGCGAAGACGACGACGAGGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGAAATCGTTTGTTCATGAGGAAGACGACGATAGTATCGATTTCGTGGACGATGAAGAGCTAAACCCTTTGATGTTCACAACATTTGGACACAAATCAAAGGATGTAAATGGGGAGAAAGGTGGTGATTTGATCATTGGAGCTTATGAGCTGAATATGAATATGGAATCAAAATACAATGAGATTATGGAGATGGAGGAGGATGAGGAGAAGAAGAAAGTGCAAAGGAGGATAACACTGGCGGACTTGTTCTTGGCGGATGCTGGAGATGTGGCGAAAGCACTAGAGAATGAAAAAGTGCTTCAAAAGAAAACAGGTGATGTTAGAACTAAGAGTGGCCTCTCCTTTGCCAAGAAGCTTATCCCTCGAGTTAAGGAGGATTCACATCCCATTAAGAATCTTCAACGAGTGAGTAATGTTGTTGTTATTTATTTATTTATTTTTCGTGGATTTTAATGATTTTTTGAGACAGCCACCAAAACATAATCTTTAAAGAAAAAGACCAAATCAAAAGCAAATCCGAAGTACAAATCATGCATGATGACGTGTTATGATGCCACGTGTACGCAGTTGATGAGAAGGATGCTGAAGAGGAAGATCCACCCAGAGATTGAGGACAAGATCAACAAAGCATCATCATCTGACCAAACTCACCAAATAGGAACACCCAACCATGAAGCATTTGAAGGCTTTGAAGCTCTCTCTCTTCTTCCAAATCAAGGTAAATTATACACTCTTCTCTTATTCCTATATTAAACACTAAAACCCTAATTTTTCTTTTTGTTTTCGAAGTAATTTTAATATAAGTTCGAAAACGTTTCATAACAATAAGAAGCAAAAACGAGTAACAGTTACTAATGCTTATATTTCCTAATAACTTGAAACACAAAACATAAAACGAGAAAAAAGAACGTTACCAAACCCTAATCCAATAACCTAACCAAAGAGTATTATTTTCTTTGTGATACTTAAATTGTGAGATCCCACGTCGAGGGAGGAGAACGAAACATTTTTTATAAGGGTGTAGAAACTTCTCCTTAAGAAACGAGTTTTAAAAATTTGGAAGGAAAACCCGAATGAAAAAACTCAAAGCAAACAATATCGACTAATGTTACGCTAGTACAGAAATTGAACCAATTTCACCGCCAACAGCCGAGAAGTAAAATCCAAGAGAGAAGGGGTCAAAGAAATTGGTCACAAATCTTTTCCTATCATACAATTCTTGCTTATTAGATGAACATATGAAATCCCAGCAATCTTGTGGGGTTATCAGACGTCTAATCCACACACTGCAGTTAGTGGGGACACTTCAATTATTTATTTACTCCATCAAAATTCTCTGTTTTGAATTATAAGTTCTTGTTTCTCTGATGAGTGCTTGGATTTGGTGTGTTTTGTATGTGCAGATGCAGTTGCCTGATGGATTTAATTCATGGGTGTCTTCTAAATTATGTCTCTGATTGCTTAGAGTTATGCTTAATTATCTTATGGTAATTATCAAAAACAATGTTTATTCTTATTATTATTATGATTATCATTAGTAATTTTGTTCATTAGATCTTGTTGTATATGAAGCGTTAATTAAGACTACTTGATTCTGTTCTGTAAGCTATTTTGATGTTGTTTTGGCTTAGCATACAAGTCATGGAAGTGTGGTTTGTCGGTCAGTTCTTGGCGTTTCATTTGTTGGTTAAATTATTCATCTCCAATCAAAATATTGTTCATT

mRNA sequence

TTTCTAACTCACAATCTTTCAACCAAAATGAAGATCTTCAACTGGGTGCACAAGACTTTTCATCACACCGCTCTCAAGGAGGGTTATACTCAAAATGCGACGAAGAAGACCGAAACCGCAATCATTAATGAAGTGGACAGGCAAGCATTGTTGAAGCAAGTAGATCTTGATGTGGAAGCCCTTCATGACTGGAGAGATGGCATTCTCACCATTGGTACATTCGGGTTCGAATCATTGAAACCATCGAACAAGCAAATGGAGTATCTCGTACTCAAGAGCGAAGACGACGACGAGGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGAAATCGTTTGTTCATGAGGAAGACGACGATAGTATCGATTTCGTGGACGATGAAGAGCTAAACCCTTTGATGTTCACAACATTTGGACACAAATCAAAGGATGTAAATGGGGAGAAAGGTGGTGATTTGATCATTGGAGCTTATGAGCTGAATATGAATATGGAATCAAAATACAATGAGATTATGGAGATGGAGGAGGATGAGGAGAAGAAGAAAGTGCAAAGGAGGATAACACTGGCGGACTTGTTCTTGGCGGATGCTGGAGATGTGGCGAAAGCACTAGAGAATGAAAAAGTGCTTCAAAAGAAAACAGGTGATGTTAGAACTAAGAGTGGCCTCTCCTTTGCCAAGAAGCTTATCCCTCGAGTTAAGGAGGATTCACATCCCATTAAGAATCTTCAACGATTGATGAGAAGGATGCTGAAGAGGAAGATCCACCCAGAGATTGAGGACAAGATCAACAAAGCATCATCATCTGACCAAACTCACCAAATAGGAACACCCAACCATGAAGCATTTGAAGGCTTTGAAGCTCTCTCTCTTCTTCCAAATCAAGATGCAGTTGCCTGATGGATTTAATTCATGGGTGTCTTCTAAATTATGTCTCTGATTGCTTAGAGTTATGCTTAATTATCTTATGGTAATTATCAAAAACAATGTTTATTCTTATTATTATTATGATTATCATTAGTAATTTTGTTCATTAGATCTTGTTGTATATGAAGCGTTAATTAAGACTACTTGATTCTGTTCTGTAAGCTATTTTGATGTTGTTTTGGCTTAGCATACAAGTCATGGAAGTGTGGTTTGTCGGTCAGTTCTTGGCGTTTCATTTGTTGGTTAAATTATTCATCTCCAATCAAAATATTGTTCATT

Coding sequence (CDS)

ATGAAGATCTTCAACTGGGTGCACAAGACTTTTCATCACACCGCTCTCAAGGAGGGTTATACTCAAAATGCGACGAAGAAGACCGAAACCGCAATCATTAATGAAGTGGACAGGCAAGCATTGTTGAAGCAAGTAGATCTTGATGTGGAAGCCCTTCATGACTGGAGAGATGGCATTCTCACCATTGGTACATTCGGGTTCGAATCATTGAAACCATCGAACAAGCAAATGGAGTATCTCGTACTCAAGAGCGAAGACGACGACGAGGAGGAAGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGAAATCGTTTGTTCATGAGGAAGACGACGATAGTATCGATTTCGTGGACGATGAAGAGCTAAACCCTTTGATGTTCACAACATTTGGACACAAATCAAAGGATGTAAATGGGGAGAAAGGTGGTGATTTGATCATTGGAGCTTATGAGCTGAATATGAATATGGAATCAAAATACAATGAGATTATGGAGATGGAGGAGGATGAGGAGAAGAAGAAAGTGCAAAGGAGGATAACACTGGCGGACTTGTTCTTGGCGGATGCTGGAGATGTGGCGAAAGCACTAGAGAATGAAAAAGTGCTTCAAAAGAAAACAGGTGATGTTAGAACTAAGAGTGGCCTCTCCTTTGCCAAGAAGCTTATCCCTCGAGTTAAGGAGGATTCACATCCCATTAAGAATCTTCAACGATTGATGAGAAGGATGCTGAAGAGGAAGATCCACCCAGAGATTGAGGACAAGATCAACAAAGCATCATCATCTGACCAAACTCACCAAATAGGAACACCCAACCATGAAGCATTTGAAGGCTTTGAAGCTCTCTCTCTTCTTCCAAATCAAGATGCAGTTGCCTGA

Protein sequence

MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLDVEALHDWRDGILTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVQRRITLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEAFEGFEALSLLPNQDAVA

Homology

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BLAST of Carg26675 vs. NCBI nr
Match: XP_023006624.1 (eukaryotic translation initiation factor 5B [Cucurbita maxima])

HSP 1 Score: 491.5 bits (1264), Expect = 2.0e-135
Identity = 284/291 (97.59%), Postives = 285/291 (97.94%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLDVEALHDWRDGIL 60
           MKIFNWVHKTFHHTALKEGYTQNATKKTETA INEVDRQALLKQVDLDVEALHDWRDGIL
Sbjct: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLDVEALHDWRDGIL 60

Query: 61  TIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDDE 120
           TIGTFGFESLKPSNKQMEYLVL XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DFVDDE
Sbjct: 61  TIGTFGFESLKPSNKQMEYLVLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIDFVDDE 120

Query: 121 ELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVQRRIT 180
           ELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKV+RRIT
Sbjct: 121 ELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRIT 180

Query: 181 LADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMR 240
           LADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMR
Sbjct: 181 LADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMR 240

Query: 241 RMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEAFEGFEALSLLPNQDAVA 292
           RMLKRKIHPEIEDKINKASSSDQTHQIGTPNHE FEGFEALSLLP QDAVA
Sbjct: 241 RMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEGFEGFEALSLLPIQDAVA 291

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BLAST of Carg26675 vs. NCBI nr
Match: XP_022958918.1 (adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058.1 adoMet-dependent rRNA methyltransferase SPB1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487.3 bits (1253), Expect = 3.7e-134
Identity = 285/291 (97.94%), Postives = 286/291 (98.28%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLDVEALHDWRDGIL 60
           MKIFNWVHKTFHHTALKEGYTQNATKKTETA INEVDRQALLKQVDLDVEALHDWRDGIL
Sbjct: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLDVEALHDWRDGIL 60

Query: 61  TIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDDE 120
           TIGTFGFESLKPSNKQMEYLVL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDDE
Sbjct: 61  TIGTFGFESLKPSNKQMEYLVL--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDDE 120

Query: 121 ELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVQRRIT 180
           ELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKV+RRIT
Sbjct: 121 ELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRIT 180

Query: 181 LADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMR 240
           LADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMR
Sbjct: 181 LADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMR 240

Query: 241 RMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEAFEGFEALSLLPNQDAVA 292
           RMLKRKIHPEIEDKINKASSSDQTHQIGTPNHE FEGFEALSLLP QDAVA
Sbjct: 241 RMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEGFEGFEALSLLPIQDAVA 289

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BLAST of Carg26675 vs. NCBI nr
Match: XP_023549056.1 (adoMet-dependent rRNA methyltransferase SPB1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 5.9e-132
Identity = 284/296 (95.95%), Postives = 286/296 (96.62%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTA-----LKEGYTQNATKKTETAIINEVDRQALLKQVDLDVEALHDW 60
           MKIFNWVHKTFHHTA     LK+GYTQNATKKTETA INEVDRQALLKQVDLDVEALHDW
Sbjct: 1   MKIFNWVHKTFHHTALKGFSLKQGYTQNATKKTETATINEVDRQALLKQVDLDVEALHDW 60

Query: 61  RDGILTIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 120
           RDGILTIGTFGFESLKPSNKQMEYLVL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD
Sbjct: 61  RDGILTIGTFGFESLKPSNKQMEYLVL--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD 120

Query: 121 FVDDEELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKV 180
           FVDDEELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKV
Sbjct: 121 FVDDEELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKV 180

Query: 181 QRRITLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNL 240
           +RRITLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNL
Sbjct: 181 ERRITLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNL 240

Query: 241 QRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEAFEGFEALSLLPNQDAVA 292
           QRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHE FEGFEALSLLP QDAVA
Sbjct: 241 QRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEGFEGFEALSLLPIQDAVA 294

[Close]

BLAST of Carg26675 vs. NCBI nr
Match: XP_008459743.1 (PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 1.1e-90
Identity = 216/295 (73.22%), Postives = 240/295 (81.36%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ Q+ATKK E+  INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDD 120
           LTIGTFGFESLKPSN+Q EY  L      XXXXXXXXXXXXXXXXXXXXXXXXX  ++++
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFAL------XXXXXXXXXXXXXXXXXXXXXXXXXIGYLEN 120

Query: 121 EELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVQRRI 180
           EELNPLMF  FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK +RRI
Sbjct: 121 EELNPLMFKAFGHKSKDVSVEKGEDDLI-----------KYNAIMEMENEEEKKKGERRI 180

Query: 181 TLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLM 240
           TLADLFLADA DVAKALE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLM
Sbjct: 181 TLADLFLADARDVAKALEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLM 240

Query: 241 RRMLKRKIHPEIEDK--INKASSSDQTHQIG-TPNHEAFEGFEALSLLPNQDAVA 292
           RRM+KRKIHPE+EDK  INK SS   THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 RRMMKRKIHPEVEDKIIINKPSSDLITHQIGIIPNNGPFQSFESISLLPTQDAIA 278

[Close]

BLAST of Carg26675 vs. NCBI nr
Match: XP_011656860.1 (PREDICTED: uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 7.6e-87
Identity = 218/296 (73.65%), Postives = 240/296 (81.08%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+  INEVD  ALLKQV  D VE +HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDD 120
           LTIGTFGFESLKPSN+       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++++
Sbjct: 61  LTIGTFGFESLKPSNE-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLEN 120

Query: 121 EELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVQRRI 180
           EELNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK +RRI
Sbjct: 121 EELNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRI 180

Query: 181 TLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLM 240
           TLADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLM
Sbjct: 181 TLADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLM 240

Query: 241 RRMLKRKIHPEIEDK--INKASSSD-QTHQIG-TPNHEAFEGFEALSLLPNQDAVA 292
           RRM+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 RRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280

[Close]

BLAST of Carg26675 vs. TAIR10
Match: AT2G46640.3 (unknown protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 87/320 (27.19%), Postives = 140/320 (43.75%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKE--GYTQNATKKTETAIIN-EVDRQALLKQVDLDVEALHDWRD 60
           M IFNWV K  H   +KE  G  +N  KK    I   E + +A+L QV L V+AL +W D
Sbjct: 1   MTIFNWVQKKLHQNVIKEIDGVRKNEKKKRNEGISEIEKNTKAILDQVGL-VDALDNWFD 60

Query: 61  GILTIGTFGFESL-----------KPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXX 120
           G+LTIGTFGF++L           +  +  ++Y+V+                        
Sbjct: 61  GVLTIGTFGFDTLNFKEEDEMDDDECGSGDLDYVVIDGSIIKNV---------------- 120

Query: 121 XXXXXXXXDFVDDEELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEM 180
                       D+E +PL+  +  +K  D + + G   +    +   ++++     +  
Sbjct: 121 ------------DQESDPLI--SVENKFYDHHEDVGNLYVQADTDHFGSIKTAETPAVTA 180

Query: 181 EEDEEKKKVQRRITLADLFLADAGDVAKA----------LENEKVLQKKTGDVRTKSGLS 240
             + E +  ++R TLA+LF+ D                 L+ E+V   K    +     S
Sbjct: 181 AAEAEIEPQKKRTTLAELFMEDHDKGYDTWHCKKPNNPNLDGEEVKYYKQNGSKLSKRFS 240

Query: 241 FAKKLIPRVK-----EDSHPIKNLQRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPN 292
           F KK +   K      D  PIK ++++++RMLK+KIHP+++    KA   D  ++  T N
Sbjct: 241 FVKKKLVMSKSKEEENDLRPIKKMRQMIKRMLKKKIHPDVD--ATKALKKDVPYK-PTRN 283

[Close]

BLAST of Carg26675 vs. TrEMBL
Match: tr|A0A1S3CAZ2|A0A1S3CAZ2_CUCME (U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 GN=LOC103498785 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.5e-91
Identity = 216/295 (73.22%), Postives = 240/295 (81.36%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ Q+ATKK E+  INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDD 120
           LTIGTFGFESLKPSN+Q EY  L      XXXXXXXXXXXXXXXXXXXXXXXXX  ++++
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFAL------XXXXXXXXXXXXXXXXXXXXXXXXXIGYLEN 120

Query: 121 EELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVQRRI 180
           EELNPLMF  FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK +RRI
Sbjct: 121 EELNPLMFKAFGHKSKDVSVEKGEDDLI-----------KYNAIMEMENEEEKKKGERRI 180

Query: 181 TLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLM 240
           TLADLFLADA DVAKALE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLM
Sbjct: 181 TLADLFLADARDVAKALEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLM 240

Query: 241 RRMLKRKIHPEIEDK--INKASSSDQTHQIG-TPNHEAFEGFEALSLLPNQDAVA 292
           RRM+KRKIHPE+EDK  INK SS   THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 RRMMKRKIHPEVEDKIIINKPSSDLITHQIGIIPNNGPFQSFESISLLPTQDAIA 278

[Close]

BLAST of Carg26675 vs. TrEMBL
Match: tr|A0A0A0KCK2|A0A0A0KCK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.6e-85
Identity = 217/296 (73.31%), Postives = 238/296 (80.41%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+  INEVD  ALLKQV  D VE +HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDD 120
           LTIGTFGFESLKPSN+       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++++
Sbjct: 61  LTIGTFGFESLKPSNE-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGYLEN 120

Query: 121 EELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVQRRI 180
           EELNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK +RRI
Sbjct: 121 EELNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRI 180

Query: 181 TLADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLM 240
           TLADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLM
Sbjct: 181 TLADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLM 240

Query: 241 RRMLKRKIHPEIEDK--INKASSSD-QTHQIG-TPNHEAFEGFEALSLLPNQDAVA 292
           RRM+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP Q A A
Sbjct: 241 RRMMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADA 280

[Close]

BLAST of Carg26675 vs. TrEMBL
Match: tr|A0A2P4KRW0|A0A2P4KRW0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37650 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.6e-51
Identity = 173/300 (57.67%), Postives = 203/300 (67.67%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLDVEALHDWRDGIL 60
           MKIFNWVHK FHHT LKEG  +N   KT  +  N  D+QALLKQV L  E L  WRDGIL
Sbjct: 1   MKIFNWVHKRFHHTVLKEGLARNV--KTTESTTNNSDKQALLKQVAL-AEVLDGWRDGIL 60

Query: 61  TIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDDE 120
           TIGTFGF+ LKP N+Q EYLV   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     E
Sbjct: 61  TIGTFGFDPLKPFNQQKEYLV---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHE 120

Query: 121 ELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMES------KYNEIMEMEEDEEKKK 180
           ELNPLMFTTF H  +D+      D+ +   ++ M ++       +Y+E ++  E EEKKK
Sbjct: 121 ELNPLMFTTFEHNFEDLESNFDHDINVCKPDVIMTVDGVPLTPPEYDE-LDNREGEEKKK 180

Query: 181 VQRRITLADLFLADAGDVAKALENEKVLQK--KTGDVRTKSGLSFAKKLIPRV---KEDS 240
              RITLADLFLADA DV + L+ +       K   +RTK+GLSFAKK IPRV   KEDS
Sbjct: 181 KGERITLADLFLADA-DVKEKLDPDHFFPNSGKKTVLRTKNGLSFAKKFIPRVKGAKEDS 240

Query: 241 HPIKNLQRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEAFEGFEALSLLPNQDA 290
            PIKNLQRLMR+MLKRKIHPE E KI+K S S    + G   ++     E+++LLP Q A
Sbjct: 241 SPIKNLQRLMRKMLKRKIHPEFEVKIHK-SESQTPGETGVITNDEHGVSESVTLLPTQGA 291

[Close]

BLAST of Carg26675 vs. TrEMBL
Match: tr|U3MMQ4|U3MMQ4_PRUPE (TAC1 OS=Prunus persica OX=3760 GN=PRUPE_2G194000 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 162/304 (53.29%), Postives = 201/304 (66.12%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDL-DVEALHDWRDGI 60
           MKIFNWVHK  H   +K+G+  N  KK+E    N+ D QA LKQV L +V+ L  WRDGI
Sbjct: 1   MKIFNWVHKRLHQRVVKDGFAGN-VKKSELE-TNDKDTQAFLKQVGLVNVDGLDGWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDD 120
           LTIGTFGF+ LKPS  Q EY VL  XXXXXXXXXXXXXXXXXXXXXXXXXX      V+D
Sbjct: 61  LTIGTFGFDPLKPSTHQNEYFVLESXXXXXXXXXXXXXXXXXXXXXXXXXXHS----VED 120

Query: 121 EELNPLMFTTFGHKSKDVNG------EKGGDLIIGAYELNMNMESKYNEIM----EMEED 180
           EELNPLMFTTF H  +D+        +K  D+I+    + +      +EI     +   D
Sbjct: 121 EELNPLMFTTFEHSFEDIGSNFDAIVQKPADVILTVDGVPLTPFEGSSEISTKPDQSAND 180

Query: 181 EEKKKVQRRITLADLFLADAGDVAK-ALENEKVL--QKKTGDVRTKSGLSFAKKLIPRVK 240
           + K K  +RITLADLF AD  DV +  L++ KV    +K  + RT+SGL+FAKKLIPRVK
Sbjct: 181 QSKNKKGQRITLADLFQADVPDVGQLKLDSGKVQPEMEKKMNARTRSGLAFAKKLIPRVK 240

Query: 241 EDSHPIKNLQRLMRRMLKRKIHP-EIEDKINKASSSDQTHQIGTPNHEAFEGFEALSLLP 290
           +DS PIKN+QRLMRRMLKRKIHP E+E KI+K+    Q   +   ++   + +E++SLLP
Sbjct: 241 DDSSPIKNMQRLMRRMLKRKIHPAELEVKIHKSDGQKQPSAVELISNVENDAYESVSLLP 298

[Close]

BLAST of Carg26675 vs. TrEMBL
Match: tr|A0A2N9IRQ4|A0A2N9IRQ4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54876 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.4e-44
Identity = 160/307 (52.12%), Postives = 192/307 (62.54%), Query Frame = 0


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETAIINEVDRQALLKQVDLDVEALHDWRDGIL 60
           MKIFNWVHK FHHT LK+G+ ++   KT     N  D+QALLKQV L  + L  WRDGIL
Sbjct: 1   MKIFNWVHKRFHHTVLKDGFARSV--KTTELTTNNTDKQALLKQVAL-ADVLDGWRDGIL 60

Query: 61  TIGTFGFES-LKPSNKQMEYLVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDD 120
           TIGT G E+ LKP N+Q EYL+L       XXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  TIGTLGLENPLKPFNQQNEYLIL-----ESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EELNPLMFTTFGHKSKDVNGEKGGDLI-----------------IGAYELNMNMESKYNE 180
               PLMFTTFGH  +D       D +                 +G+ ELN+ +++    
Sbjct: 121 XXXXPLMFTTFGHNFEDFESNPDHDNVHKPDVIMTVDGVSLTPYLGSPELNVELDN---- 180

Query: 181 IMEMEEDEEKKKVQRRITLADLFLADAGDVAKALENEKVLQK--KTGDVRTKSGLSFAKK 240
            ME    E+KKK   RITLADLFLADA DV + L+ ++V     K   +RTK+GLSFAKK
Sbjct: 181 -ME-GSGEQKKKKGERITLADLFLADA-DVKEKLKPDQVYPNSGKKPVLRTKNGLSFAKK 240

Query: 241 LIPRVKEDSHPIKNLQRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEAFEGFEA 288
            IPRVKEDS PIKNLQRLM+RMLKRKIHPE E K++K S  ++  + G          E+
Sbjct: 241 FIPRVKEDSTPIKNLQRLMKRMLKRKIHPEFEVKMHK-SDGEKPGETGLIIDGEHGVSES 291

The following BLAST results are available for this feature:

BLAST of Carg26675 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006624.1	2.0e-135	97.59	eukaryotic translation initiation factor 5B [Cucurbita maxima]	[more]
XP_022958918.1	3.7e-134	97.94	adoMet-dependent rRNA methyltransferase SPB1 [Cucurbita moschata] >XP_023549058....	[more]
XP_023549056.1	5.9e-132	95.95	adoMet-dependent rRNA methyltransferase SPB1 isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_008459743.1	1.1e-90	73.22	PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A [Cucumis melo]	[more]
XP_011656860.1	7.6e-87	73.65	PREDICTED: uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus]	[more]

BLAST of Carg26675 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46640.3	1.1e-15	27.19	unknown protein	[more]

BLAST of Carg26675 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg26675 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CAZ2\|A0A1S3CAZ2_CUCME	7.5e-91	73.22	U3 small nucleolar RNA-associated protein 14 homolog A OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0KCK2\|A0A0A0KCK2_CUCSA	1.6e-85	73.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107930 PE=4 SV=1	[more]
tr\|A0A2P4KRW0\|A0A2P4KRW0_QUESU	2.6e-51	57.67	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37650 PE=4 SV=1	[more]
tr\|U3MMQ4\|U3MMQ4_PRUPE	1.2e-48	53.29	TAC1 OS=Prunus persica OX=3760 GN=PRUPE_2G194000 PE=4 SV=1	[more]
tr\|A0A2N9IRQ4\|A0A2N9IRQ4_FAGSY	2.4e-44	52.12	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54876 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26675-RA	Carg26675-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..112
None	No IPR available	PANTHER	PTHR38366	FAMILY NOT NAMED	coord: 1..289

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26675	Cla006689	Watermelon (97103) v1	carwmB0902
Carg26675	Csa6G107930	Cucumber (Chinese Long) v2	carcuB0915
Carg26675	MELO3C022248	Melon (DHL92) v3.5.1	carmeB0887
Carg26675	ClCG06G002790	Watermelon (Charleston Gray)	carwcgB0877
Carg26675	CSPI06G08580	Wild cucumber (PI 183967)	carcpiB0936
Carg26675	Cucsa.120810	Cucumber (Gy14) v1	carcgyB1018
Carg26675	CmaCh17G005010	Cucurbita maxima (Rimu)	carcmaB1239
Carg26675	CmoCh17G004740	Cucurbita moschata (Rifu)	carcmoB1210
Carg26675	Lsi09G016550	Bottle gourd (USVL1VR-Ls)	carlsiB821
Carg26675	Cp4.1LG12g04310	Cucurbita pepo (Zucchini)	carcpeB1250
Carg26675	CsGy6G008680	Cucumber (Gy14) v2	carcgybB0888
Carg26675	MELO3C022248.2	Melon (DHL92) v3.6.1	carmedB0895
Carg26675	CsaV3_6G008960	Cucumber (Chinese Long) v3	carcucB0938
Carg26675	Cla97C06G112160	Watermelon (97103) v2	carwmbB0942
Carg26675	Bhi12G001939	Wax gourd	carwgoB1045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26675	Bottle gourd (USVL1VR-Ls)	carlsiB820