CmoCh17G004740 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G004740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TAC1
Location	Cmo_Chr17 : 3472249 .. 3474585 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCCTTTCTAACTCACAATCTTTCAACCAAAATGAAGGTCTTTACGTCCCTCTAACCCTACTCTTTCCATTTTCTTCATACTCTCTTTATTCATTTATTCACCACTTTCTTTCTTACTTCAGATCTTCAACTGGGTGCACAAGACTTTTCATCACACCGCTCTCAAGGGTTTCTCTCTCATACGTCTCATTTTACTTCATTTTTTCATAGAGATCGAAAAAAAAATAACTTTTTATACGTACAACTATTTCAATTTTGAATTGTTCCAAGAGTTCAACGATTGCCGAGGTGCGAGATCGATCCATCTAACTTATAAGATTGTTATTTTTTCTAGAGGGTTATACTCAAAATGCGACGAAGAAGACCGAAACCGCAACCATTAATGAAGTGGACAGGCAAGCATTGTTGAAGCAAGTAGATCTTGATGTGGAAGCCCTTCATGACTGGAGAGATGGCATTCTCACCATTGGTACATTCGGGTTCGAATCATTGAAACCATCGAACAAGCAAATGGAGTATCTCGTACTAAAGAGCGAAGACGACGACGAGGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGAAATCATTCGTTCATGAGGAAGACGACGATAGTATCGATTTCGTGGACGATGAAGAGCTAAACCCTTTGATGTTCACAACATTTGGACACAAATCAAAGGATGTAAATGGGGAGAAAGGTGGTGATTTGATCATTGGAGCTTATGAGCTGAATATGAATATGGAATCAAAATACAATGAGATTATGGAGATGGAGGAGGATGAGGAGAAGAAGAAAGTGGAAAGGAGGATAACACTGGCGGACTTGTTCTTGGCGGATGCTGGAGATGTGGCGAAAGCACTAGAGAATGAAAAAGTGCTTCAAAAGAAAACAGGTGATGTTAGAACTAAGAGTGGCCTCTCCTTTGCCAAGAAGCTTATCCCTCGAGTTAAGGAGGATTCACATCCCATTAAGAATCTTCAACGAGTGAGTAATGTTGTTGTTATTTATTTATTTATTTTTCGTGGATTTTAATGATTTTTTGAGACAGCCACCAAAACATAATCTTTAAAGAAAAAGACCAAATCAAAAGCAAATCCGAAGTACAAATCATGCATGATGACGTGTTATGATGCCACGTGTACGCAGTTGATGAGAAGGATGCTGAAGAGGAAGATCCACCCAGAGATTGAAGACAAGATCAACAAAGCATCATCATCTGACCAAACTCACCAAATAGGAACACCCAACCATGAAGGATTTGAAGGCTTTGAAGCTCTCTCTCTTCTTCCAATTCAAGGTAAATTATACACTCTTCTCTTATTCCTATATTAAACACTAAAACCCTAATTTTTCTTTTTGTTTTTCGAAGTTATTTTAATATAAGTTCGAAAACGTTTCATAACAATAAGAAGCAAAAACGAGTAACAGTTACTAATGCTTATATTTCCTAATAACTTGAAACACGAAACATAAAACGAGAAAAAAGAACATTACCAAACCCTAATCCAATAACCTAACCAAAGAGTATTATTTTCTTTGTGATACTTAAATTGTAAGATCTCACGTCGATTAGGGAGGAGAACGAAATATTTTTTATAAGGGTGTAGAAACTTCTCCCTAAGAAACGAGTTTTAAAAATTTGGAAGGAAAACCCGAATGAAAAAACTCAAAGAGGACAATATCGACTAATGTTACGCTAGTACAGAAATTGAATCCGTTTCACCGCCAACAGCCGAGAAGTAAAATCCAAGAGAGAAGGGGTCAAAGAAATTGGTCACAAATCTTTTCCTATCATACAATTCTTGCTTATTAGATGAACATATGAAACCCCAGCAATCTTGTGGGGTTATCAGACGTCTAATCCACACACTGCAATTAGTGGGGACACTTCAATTATTTATTTACTCCATCAAAATTCTCTGTTTTGAATTATAAGTTCTTGTTTCTCTGATGAGTGCTTGGATTTGGTGTGTTTTGTATGTGCAGATGCAGTTGCCTGATGGATTTAATTAATGGGTGTCTTCTAAATTATGTCTCTGATTGCTTAGAGTTATGCTTAATTATCTTATGGTAATTATCAAAAACAATGTTTATTCTTATTATTATTATGATTATCATTAGTAATTTTGTTCATTAGATCTTGTTGTATATGAAGCGTTAATTAAGACTACTTGATTCTGTTCTGTAAGCTATTTTGATGTTGTTTTGGCTTAGCATACAAGTCATGGAAGTGTGGTTTGTCGGTCAGTTCTTGGCGTTTCATTTGTTGGTTAAATTATTCATCTCCAATCAAAACATTGTTCATTAATTATTTTCACTTTTTCATTCAAT

mRNA sequence

TTTCTCCTTTCTAACTCACAATCTTTCAACCAAAATGAAGATCTTCAACTGGGTGCACAAGACTTTTCATCACACCGCTCTCAAGGAGGGTTATACTCAAAATGCGACGAAGAAGACCGAAACCGCAACCATTAATGAAGTGGACAGGCAAGCATTGTTGAAGCAAGTAGATCTTGATGTGGAAGCCCTTCATGACTGGAGAGATGGCATTCTCACCATTGGTACATTCGGGTTCGAATCATTGAAACCATCGAACAAGCAAATGGAGTATCTCGTACTAAAGAGCGAAGACGACGACGAGGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGAAATCATTCGTTCATGAGGAAGACGACGATAGTATCGATTTCGTGGACGATGAAGAGCTAAACCCTTTGATGTTCACAACATTTGGACACAAATCAAAGGATGTAAATGGGGAGAAAGGTGGTGATTTGATCATTGGAGCTTATGAGCTGAATATGAATATGGAATCAAAATACAATGAGATTATGGAGATGGAGGAGGATGAGGAGAAGAAGAAAGTGGAAAGGAGGATAACACTGGCGGACTTGTTCTTGGCGGATGCTGGAGATGTGGCGAAAGCACTAGAGAATGAAAAAGTGCTTCAAAAGAAAACAGGTGATGTTAGAACTAAGAGTGGCCTCTCCTTTGCCAAGAAGCTTATCCCTCGAGTTAAGGAGGATTCACATCCCATTAAGAATCTTCAACGATTGATGAGAAGGATGCTGAAGAGGAAGATCCACCCAGAGATTGAAGACAAGATCAACAAAGCATCATCATCTGACCAAACTCACCAAATAGGAACACCCAACCATGAAGGATTTGAAGGCTTTGAAGCTCTCTCTCTTCTTCCAATTCAAGATGCAGTTGCCTGATGGATTTAATTAATGGGTGTCTTCTAAATTATGTCTCTGATTGCTTAGAGTTATGCTTAATTATCTTATGGTAATTATCAAAAACAATGTTTATTCTTATTATTATTATGATTATCATTAGTAATTTTGTTCATTAGATCTTGTTGTATATGAAGCGTTAATTAAGACTACTTGATTCTGTTCTGTAAGCTATTTTGATGTTGTTTTGGCTTAGCATACAAGTCATGGAAGTGTGGTTTGTCGGTCAGTTCTTGGCGTTTCATTTGTTGGTTAAATTATTCATCTCCAATCAAAACATTGTTCATTAATTATTTTCACTTTTTCATTCAAT

Coding sequence (CDS)

ATGAAGATCTTCAACTGGGTGCACAAGACTTTTCATCACACCGCTCTCAAGGAGGGTTATACTCAAAATGCGACGAAGAAGACCGAAACCGCAACCATTAATGAAGTGGACAGGCAAGCATTGTTGAAGCAAGTAGATCTTGATGTGGAAGCCCTTCATGACTGGAGAGATGGCATTCTCACCATTGGTACATTCGGGTTCGAATCATTGAAACCATCGAACAAGCAAATGGAGTATCTCGTACTAAAGAGCGAAGACGACGACGAGGAGGAAGAGGAAGAAGAAGAAGAAGAGGAAGAGAAATCATTCGTTCATGAGGAAGACGACGATAGTATCGATTTCGTGGACGATGAAGAGCTAAACCCTTTGATGTTCACAACATTTGGACACAAATCAAAGGATGTAAATGGGGAGAAAGGTGGTGATTTGATCATTGGAGCTTATGAGCTGAATATGAATATGGAATCAAAATACAATGAGATTATGGAGATGGAGGAGGATGAGGAGAAGAAGAAAGTGGAAAGGAGGATAACACTGGCGGACTTGTTCTTGGCGGATGCTGGAGATGTGGCGAAAGCACTAGAGAATGAAAAAGTGCTTCAAAAGAAAACAGGTGATGTTAGAACTAAGAGTGGCCTCTCCTTTGCCAAGAAGCTTATCCCTCGAGTTAAGGAGGATTCACATCCCATTAAGAATCTTCAACGATTGATGAGAAGGATGCTGAAGAGGAAGATCCACCCAGAGATTGAAGACAAGATCAACAAAGCATCATCATCTGACCAAACTCACCAAATAGGAACACCCAACCATGAAGGATTTGAAGGCTTTGAAGCTCTCTCTCTTCTTCCAATTCAAGATGCAGTTGCCTGA

Homology

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BLAST of CmoCh17G004740 vs. TrEMBL
Match: A0A0A0KCK2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107930 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.3e-101
Identity = 212/294 (72.11%), Postives = 238/294 (80.95%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVD  ALLKQV  D VE +HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120
           LTIGTFGFESLKPSN+Q EY +L+SE+DD E+EEEEEE   KSFVH+EDDD I ++++EE
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEE---KSFVHDEDDDIIGYLENEE 120

Query: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180
           LNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180

Query: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240
           ADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240

Query: 241 MLKRKIHPEIEDK--INKASSSD-QTHQIG-TPNHEGFEGFEALSLLPIQDAVA 290
           M+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP Q A A
Sbjct: 241 MMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADA 280

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BLAST of CmoCh17G004740 vs. TrEMBL
Match: U3MMQ4_PRUPE (TAC1 OS=Prunus persica PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.2e-52
Identity = 146/303 (48.18%), Postives = 192/303 (63.37%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDL-DVEALHDWRDGI 60
           MKIFNWVHK  H   +K+G+  N  KK+E  T N+ D QA LKQV L +V+ L  WRDGI
Sbjct: 1   MKIFNWVHKRLHQRVVKDGFAGNV-KKSELET-NDKDTQAFLKQVGLVNVDGLDGWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDF-VDDE 120
           LTIGTFGF+ LKPS  Q EY VL+SE+DD+E         +     ++DD+  D  V+DE
Sbjct: 61  LTIGTFGFDPLKPSTHQNEYFVLESEEDDQESHGFSHSGNDDD---DDDDEHYDHSVEDE 120

Query: 121 ELNPLMFTTFGHKSKDVNG------EKGGDLIIGAYELNMNMESKYNEIM----EMEEDE 180
           ELNPLMFTTF H  +D+        +K  D+I+    + +      +EI     +   D+
Sbjct: 121 ELNPLMFTTFEHSFEDIGSNFDAIVQKPADVILTVDGVPLTPFEGSSEISTKPDQSANDQ 180

Query: 181 EKKKVERRITLADLFLADAGDVAKA-LENEKVL--QKKTGDVRTKSGLSFAKKLIPRVKE 240
            K K  +RITLADLF AD  DV +  L++ KV    +K  + RT+SGL+FAKKLIPRVK+
Sbjct: 181 SKNKKGQRITLADLFQADVPDVGQLKLDSGKVQPEMEKKMNARTRSGLAFAKKLIPRVKD 240

Query: 241 DSHPIKNLQRLMRRMLKRKIHP-EIEDKINKASSSDQTHQIGTPNHEGFEGFEALSLLPI 288
           DS PIKN+QRLMRRMLKRKIHP E+E KI+K+    Q   +   ++   + +E++SLLPI
Sbjct: 241 DSSPIKNMQRLMRRMLKRKIHPAELEVKIHKSDGQKQPSAVELISNVENDAYESVSLLPI 298

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BLAST of CmoCh17G004740 vs. TrEMBL
Match: W9S2D9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023458 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.3e-45
Identity = 135/295 (45.76%), Postives = 176/295 (59.66%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATI---NEVDRQALLKQVDLDVEALHDWRD 60
           MK FNWVHK FHH   K+ + Q   K T    +   N+ D QALLK+V L ++AL  W+ 
Sbjct: 1   MKFFNWVHKRFHHPLPKDDFAQKVEKSTTEEVLHHTNDKDTQALLKKVVL-IDALDGWKY 60

Query: 61  GILTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDD 120
           GIL IGTFGF+ LKP N+Q EYLVL+S++DDEE  E   E  +     E  DD+    +D
Sbjct: 61  GILAIGTFGFDPLKPFNQQKEYLVLESKEDDEESPEYSLEGSDSDENDEYSDDTT--FED 120

Query: 121 EELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRI 180
           EE+NPLM +T GH  KDV  +       G +  +  + ++    + ++ D EKKKV  R 
Sbjct: 121 EEVNPLMLSTLGHSFKDVEKKDVLLSFDGVFLASSEVAAEEKTNISLQSDHEKKKV-GRT 180

Query: 181 TLADLFLADAGDVAKALENEKVL---QKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQ 240
           TLADLFLADA DV   +++ KVL     K  + +TK  LSFAKK IP+VKE++ PIKN+Q
Sbjct: 181 TLADLFLADA-DVKMKIDSGKVLHDDSAKKMNAKTKKSLSFAKKFIPKVKEETSPIKNIQ 240

Query: 241 RLMRRMLKRKIHPEIEDKINKASSSDQTHQIGT----PNHEGFEGFEALSLLPIQ 286
           RLM+RMLKRKIHPE+ D   K   SD     G      N       E++SLL +Q
Sbjct: 241 RLMKRMLKRKIHPELLDV--KTQKSDGQKAAGAIELIANGPKNATSESVSLLAMQ 288

[Close]

BLAST of CmoCh17G004740 vs. TrEMBL
Match: A0A061E038_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005082 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.4e-45
Identity = 137/302 (45.36%), Postives = 186/302 (61.59%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLDVEALHDWRDGIL 60
           MKIFNWV + FHH  LK+G  +N  KKT++  I + + +ALL+QV L V+ L  WRDGIL
Sbjct: 1   MKIFNWVQRRFHHNVLKDGLARNV-KKTDSIAI-DTNTKALLEQVAL-VDVLDGWRDGIL 60

Query: 61  TIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEE-----EEEEEKSFVHEEDDDSIDFV 120
           TIGTFGF+ LK  ++Q EYL  +SE+++EEEEEEE      +EE+    H++DD++    
Sbjct: 61  TIGTFGFDPLKSFSEQKEYLASESEEEEEEEEEEERYSDNNDEEDDDDDHDDDDNN---- 120

Query: 121 DDEELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNME----SKYNEI-MEMEEDE-E 180
           +DEE+NPLMF+TF H  +DV  +       G  ++ M  +    S  +EI  +++  E  
Sbjct: 121 NDEEVNPLMFSTFEHSFEDVESDVDHPK-YGKPDVTMTFDRVAGSTDHEIKFDLDATEGH 180

Query: 181 KKKVERRITLADLFLADAGDVAK----ALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKE 240
             K+ RR TLADLF  D+    K    AL++      K   VRTK+GLSFAKKLIP+V E
Sbjct: 181 SGKLRRRTTLADLFSEDSDMKKKPSPLALDSNSC---KRASVRTKNGLSFAKKLIPQVGE 240

Query: 241 DSHPIKNLQRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEGFEGFEALSLLPIQ 288
           DS PIK L ++MRRMLKRKIHPE+E K +K     +   I     +  E  E++SLL   
Sbjct: 241 DSRPIKKLHQMMRRMLKRKIHPELEGKGSKLEGQSKASVIDVLGSKKHEAGESVSLLQTP 291

[Close]

BLAST of CmoCh17G004740 vs. TrEMBL
Match: A0A0S3SZ53_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G176900 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.4e-45
Identity = 128/260 (49.23%), Postives = 170/260 (65.38%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLDVEALHDWRDGIL 60
           MKIFNWVHK FHH +LK+G+  N  KKTE A IN  D QALLKQV L  E+L  W DGIL
Sbjct: 1   MKIFNWVHKRFHHNSLKDGFASNM-KKTEPA-INNADSQALLKQVAL-TESLGGWEDGIL 60

Query: 61  TIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEEL 120
           TIGT G++ LK  N   EY  L      E E E+E+ E E S + +E+++     + EEL
Sbjct: 61  TIGTLGYDPLKSMNPHKEYFAL------EIEVEQEDGEGENSIMVDEEEEKCYSAEHEEL 120

Query: 121 NPLMFTTFGHKSKDVNGEK--GGDLIIGAYELNMNMESKYNEIME---MEEDEEKKKVER 180
           NPL++ TF H  +D+  E    GD++    E+ +      +E+ME   ME DE+KKK ER
Sbjct: 121 NPLIYNTFEHNFEDIVSENYDDGDVVRSFNEIVVAPPVICHEVMESYDMEADEKKKKGER 180

Query: 181 RITLADLFLADAGDVAKALENEKVLQKKTGD---VRTKSGLSFAKKLIPRVKEDSHPIKN 240
            ITLADLFLAD+ DV   L   KV Q  + +   ++ K GLSFAKKLIPRVK++ HP+K+
Sbjct: 181 -ITLADLFLADS-DVKIKLNPAKVCQLASSEKPNLKAKHGLSFAKKLIPRVKDNPHPMKD 240

Query: 241 LQRLMRRMLKRKIHPEIEDK 253
           +++LM++MLKRKIHP+++ K
Sbjct: 241 IKKLMKKMLKRKIHPDLDVK 249

[Close]

BLAST of CmoCh17G004740 vs. TAIR10
Match: AT2G46640.3 (AT2G46640.3 unknown protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 91/308 (29.55%), Postives = 147/308 (47.73%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKE--GYTQNATKKTETATINEVDR--QALLKQVDLDVEALHDWR 60
           M IFNWV K  H   +KE  G  +N  KK     I+E+++  +A+L QV L V+AL +W 
Sbjct: 1   MTIFNWVQKKLHQNVIKEIDGVRKNEKKKRNEG-ISEIEKNTKAILDQVGL-VDALDNWF 60

Query: 61  DGILTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVD 120
           DG+LTIGTFGF++L               +  EE+E +++E       +   D SI    
Sbjct: 61  DGVLTIGTFGFDTL---------------NFKEEDEMDDDECGSGDLDYVVIDGSIIKNV 120

Query: 121 DEELNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERR 180
           D+E +PL+  +  +K  D + + G   +    +   ++++     +    + E +  ++R
Sbjct: 121 DQESDPLI--SVENKFYDHHEDVGNLYVQADTDHFGSIKTAETPAVTAAAEAEIEPQKKR 180

Query: 181 ITLADLFLADAGDVAKA----------LENEKVLQKKTGDVRTKSGLSFAKKLIPRVK-- 240
            TLA+LF+ D                 L+ E+V   K    +     SF KK +   K  
Sbjct: 181 TTLAELFMEDHDKGYDTWHCKKPNNPNLDGEEVKYYKQNGSKLSKRFSFVKKKLVMSKSK 240

Query: 241 ---EDSHPIKNLQRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGTPNHEGFEGFEALSL 290
               D  PIK ++++++RMLK+KIHP+++    KA   D  ++         E  E+  L
Sbjct: 241 EEENDLRPIKKMRQMIKRMLKKKIHPDVD--ATKALKKDVPYK----PTRNCEALESHYL 283

[Close]

BLAST of CmoCh17G004740 vs. NCBI nr
Match: gi|778712188|ref|XP_011656860.1| (PREDICTED: uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 1.9e-102
Identity = 213/294 (72.45%), Postives = 240/294 (81.63%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVD  ALLKQV  D VE +HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120
           LTIGTFGFESLKPSN+Q EY +L+SE+DD E+EEEEEE   KSFVH+EDDD I ++++EE
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEE---KSFVHDEDDDIIGYLENEE 120

Query: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180
           LNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180

Query: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240
           ADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240

Query: 241 MLKRKIHPEIEDK--INKASSSD-QTHQIG-TPNHEGFEGFEALSLLPIQDAVA 290
           M+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 MMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQDAIA 280

[Close]

BLAST of CmoCh17G004740 vs. NCBI nr
Match: gi|659119603|ref|XP_008459743.1| (PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A isoform X2 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 2.5e-102
Identity = 212/293 (72.35%), Postives = 239/293 (81.57%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ Q+ATKK E+  INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120
           LTIGTFGFESLKPSN+Q EY  L+SE+DD E+EEEEE    KSFVH+EDDD I ++++EE
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFALESEEDDYEDEEEEE----KSFVHDEDDDIIGYLENEE 120

Query: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180
           LNPLMF  FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMFKAFGHKSKDVSVEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180

Query: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240
           ADLFLADA DVAKALE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADARDVAKALEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240

Query: 241 MLKRKIHPEIEDK--INKASSSDQTHQIG-TPNHEGFEGFEALSLLPIQDAVA 290
           M+KRKIHPE+EDK  INK SS   THQIG  PN+  F+ FE++SLLP QDA+A
Sbjct: 241 MMKRKIHPEVEDKIIINKPSSDLITHQIGIIPNNGPFQSFESISLLPTQDAIA 278

[Close]

BLAST of CmoCh17G004740 vs. NCBI nr
Match: gi|449445710|ref|XP_004140615.1| (PREDICTED: uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 6.2e-101
Identity = 212/294 (72.11%), Postives = 238/294 (80.95%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ QNATKK E+ +INEVD  ALLKQV  D VE +HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQNATKKNESVSINEVDSHALLKQVAFDRVETIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120
           LTIGTFGFESLKPSN+Q EY +L+SE+DD E+EEEEEE   KSFVH+EDDD I ++++EE
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFMLESEEDDYEDEEEEEE---KSFVHDEDDDIIGYLENEE 120

Query: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180
           LNPLM   FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMLKAFGHKSKDVSAEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180

Query: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240
           ADLFLADA DVAK LE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADARDVAKVLEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240

Query: 241 MLKRKIHPEIEDK--INKASSSD-QTHQIG-TPNHEGFEGFEALSLLPIQDAVA 290
           M+KRKIHPEIEDK  INK SSSD  THQIG  PN+  F+ FE++SLLP Q A A
Sbjct: 241 MMKRKIHPEIEDKVIINKPSSSDLTTHQIGIIPNNGPFQSFESISLLPTQGADA 280

[Close]

BLAST of CmoCh17G004740 vs. NCBI nr
Match: gi|659119601|ref|XP_008459742.1| (PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 [Cucumis melo])

HSP 1 Score: 375.6 bits (963), Expect = 8.0e-101
Identity = 211/293 (72.01%), Postives = 237/293 (80.89%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLD-VEALHDWRDGI 60
           MKIFNWVHKTFHH+ LKEG+ Q+ATKK E+  INEVDR ALLKQV  D VEA+HDWRDGI
Sbjct: 1   MKIFNWVHKTFHHSLLKEGFAQHATKKNESVGINEVDRHALLKQVAFDHVEAIHDWRDGI 60

Query: 61  LTIGTFGFESLKPSNKQMEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120
           LTIGTFGFESLKPSN+Q EY  L+SE+DD E+EEEEE    KSFVH+EDDD I ++++EE
Sbjct: 61  LTIGTFGFESLKPSNEQKEYFALESEEDDYEDEEEEE----KSFVHDEDDDIIGYLENEE 120

Query: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNMESKYNEIMEMEEDEEKKKVERRITL 180
           LNPLMF  FGHKSKDV+ EKG D +I           KYN IMEME +EEKKK ERRITL
Sbjct: 121 LNPLMFKAFGHKSKDVSVEKGEDDLI-----------KYNAIMEMENEEEKKKGERRITL 180

Query: 181 ADLFLADAGDVAKALENEKVLQKKTGDVRTKSGLSFAKKLIPRVKEDSHPIKNLQRLMRR 240
           ADLFLADA DVAKALE++KVLQKKT DVR+KSGLSFAKK IPRVKEDSHPIKN QRLMRR
Sbjct: 181 ADLFLADARDVAKALEDDKVLQKKTADVRSKSGLSFAKKFIPRVKEDSHPIKNFQRLMRR 240

Query: 241 MLKRKIHPEIEDK--INKASSSDQTHQIG-TPNHEGFEGFEALSLLPIQDAVA 290
           M+KRKIHPE+EDK  INK SS   THQIG  PN+  F+ FE++SLLP Q A A
Sbjct: 241 MMKRKIHPEVEDKIIINKPSSDLITHQIGIIPNNGPFQSFESISLLPTQGADA 278

[Close]

BLAST of CmoCh17G004740 vs. NCBI nr
Match: gi|1009176779|ref|XP_015869614.1| (PREDICTED: uncharacterized protein LOC107406908, partial [Ziziphus jujuba])

HSP 1 Score: 222.6 bits (566), Expect = 8.7e-55
Identity = 157/306 (51.31%), Postives = 198/306 (64.71%), Query Frame = 1


Query: 1   MKIFNWVHKTFHHTALKEGYTQNATKKTETATINEVDRQALLKQVDLDVEALHDWRDGIL 60
           MKIFNWVHK FHH+ LK+   QN  +KTE  T ++ D QALLKQV L V+AL  W+DGIL
Sbjct: 1   MKIFNWVHKRFHHSVLKDDLAQNV-EKTELVT-SDKDTQALLKQVAL-VDALDGWKDGIL 60

Query: 61  TIGTFGFESLKPSNKQ-MEYLVLKSEDDDEEEEEEEEEEEEKSFVHEEDDDSIDFVDDEE 120
           TIGTFGF+ LKP N+Q  EYLVL+SE+DDEE  E   +         ++D   D V+DEE
Sbjct: 61  TIGTFGFDPLKPFNQQPKEYLVLESEEDDEESREYLLDS-------NDEDGENDNVEDEE 120

Query: 121 LNPLMFTTFGHKSKDVNGEKGGDLIIGAYELNMNME---------SKYNEIMEMEED--- 180
           +NPLMFT+ GH  +DV      D++    ++ + ++         S ++  + ME++   
Sbjct: 121 VNPLMFTSLGHSFEDVGPNFDADVLEKPDDVLLTLDGVPLAPYVGSDHHHGLGMEQEICA 180

Query: 181 -EEKKKVERRITLADLFLADAGDVAKALENEKVLQK--KTGDVRTKSGLSFAKKLIPRVK 240
            ++KKK   R TLADLFLADA DV   L++ KV+ K  K  +V +K+GLSFAKK IPRVK
Sbjct: 181 VDQKKKKGERTTLADLFLADA-DVKMKLDSGKVMPKSNKKLNVGSKNGLSFAKKFIPRVK 240

Query: 241 EDSHPIKNLQRLMRRMLKRKIHPEIEDKINKASSSDQTHQIGT-----PNHEGFEGFEAL 286
           EDS PIKNLQRLM+RMLKRKIHPEI+DKINK  S  Q    G       N E     EA+
Sbjct: 241 EDSSPIKNLQRLMKRMLKRKIHPEIDDKINK--SDGQKPAAGAAGLVITNGEQAASHEAV 293

The following BLAST results are available for this feature:

BLAST of CmoCh17G004740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh17G004740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCK2_CUCSA	4.3e-101	72.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107930 PE=4 SV=1	[more]
U3MMQ4_PRUPE	8.2e-52	48.18	TAC1 OS=Prunus persica PE=4 SV=1	[more]
W9S2D9_9ROSA	3.3e-45	45.76	Uncharacterized protein OS=Morus notabilis GN=L484_023458 PE=4 SV=1	[more]
A0A061E038_THECC	7.4e-45	45.36	Uncharacterized protein OS=Theobroma cacao GN=TCM_005082 PE=4 SV=1	[more]
A0A0S3SZ53_PHAAN	7.4e-45	49.23	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G176900 PE=...	[more]

BLAST of CmoCh17G004740 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46640.3	2.7e-14	29.55	unknown protein	[more]

BLAST of CmoCh17G004740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778712188\|ref\|XP_011656860.1\|	1.9e-102	72.45	PREDICTED: uncharacterized protein LOC101216403 isoform X2 [Cucumis sativus]	[more]
gi\|659119603\|ref\|XP_008459743.1\|	2.5e-102	72.35	PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A isoform X2 [Cu...	[more]
gi\|449445710\|ref\|XP_004140615.1\|	6.2e-101	72.11	PREDICTED: uncharacterized protein LOC101216403 isoform X1 [Cucumis sativus]	[more]
gi\|659119601\|ref\|XP_008459742.1\|	8.0e-101	72.01	PREDICTED: U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 [Cu...	[more]
gi\|1009176779\|ref\|XP_015869614.1\|	8.7e-55	51.31	PREDICTED: uncharacterized protein LOC107406908, partial [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G004740.1	CmoCh17G004740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 79..102 scor
None	No IPR available	PANTHER	PTHR38366	FAMILY NOT NAMED	coord: 2..289 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G004740	Cucsa.120810	Cucumber (Gy14) v1	cgycmoB0292
CmoCh17G004740	CmaCh17G005010	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G004740	Cla006689	Watermelon (97103) v1	cmowmB346
CmoCh17G004740	Csa6G107930	Cucumber (Chinese Long) v2	cmocuB369
CmoCh17G004740	MELO3C022248	Melon (DHL92) v3.5.1	cmomeB306
CmoCh17G004740	ClCG06G002790	Watermelon (Charleston Gray)	cmowcgB325
CmoCh17G004740	CSPI06G08580	Wild cucumber (PI 183967)	cmocpiB372
CmoCh17G004740	Lsi09G016550	Bottle gourd (USVL1VR-Ls)	cmolsiB326
CmoCh17G004740	Cp4.1LG12g04310	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G004740	MELO3C022248.2	Melon (DHL92) v3.6.1	cmomedB351
CmoCh17G004740	CsaV3_6G008960	Cucumber (Chinese Long) v3	cmocucB0444
CmoCh17G004740	Cla97C06G112160	Watermelon (97103) v2	cmowmbB361
CmoCh17G004740	Bhi12G001939	Wax gourd	cmowgoB0455
CmoCh17G004740	CsGy6G008680	Cucumber (Gy14) v2	cgybcmoB744
CmoCh17G004740	Carg26675	Silver-seed gourd	carcmoB1210

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G004740	Bottle gourd (USVL1VR-Ls)	cmolsiB320