CsGy6G004670 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G004670
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	proline-rich receptor-like protein kinase PERK14
Location	Chr6 : 4292380 .. 4295397 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTCTGAAACTTGGCGACATCATATCCACACCAAACATATCCCCTCCTCAAATCCTAATCCCTTTCTCTTAAACCAAATCCCTTTTTCATCCTTTGTTTTTTTCTTTTTTATTCTTTTGACTTCAATTCTTCCATTTCACTTCCACTCACAATTTTCTGAAATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCCCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTCCATTTCATTTCCCCATCCTTTTTTTTCTTCTTTTTCTTTGATTCTGTTGTGGTTGCTTAAATTTGAACGGGATTTATTCTTGTTTGTTCGTTATGATATTTCTGAAGCACTAAAAAGAAGAAATAAGTTTTGAGAATACAAGCATAAAATTTTAATTTTTAAGAGAGAGTACTAAAAGTGAAATGGTTATTAAATTGTATATGTTTAACCATCAGGTCAAAGGCTTTTCTTGATTTGTAGAAGTAAGCTACACTGTGGTGTCAACTTCCATAAGGCTTCAAAAACTTATTTGACTAGTCCCCAGTTAATTTTTGCTTGTAGTTGCAAGTTTTGATTATGTTCAAGTGCCAAAACTCCATTTCTTTCTTTTATCTTTATGGATAACCAATTCATTTCAAATAGAGTCGTTTGCAACACTTTCTCTGTTTGAGCATTCATGGTTTGCATCTGATTGAGTTAAAAACAGTCCCTATGTGTACCTTTGTTTCGTTCCATAATGTACTGGGTGTCATAGTTGTCAGTAGGGATTTACACGGGATGAGGTGGCTTTCGAAGATGTCCAACCCAACTCTTAAAATTCGAGTTGGGTTGGTGATATGGAAACCTATGATTTGAAAATTAGGAACCCACCTCTATTATAAATTCGAGTTAATTTAAAACCTCAATTCAAAGATGATATGAACTGGTATGTCTTTGTGTTGCCTCGGGACCAATCACACGTTTCAGAACTAAGAAAATACAGTTAGCATTACGTTCAAGATCAGGAAGTGCACTCAATTGAGGAGAGAAGATTATAATCGGAATCAGTTGACGCTAGAAGATGAAACCAATTGACCTTTGACATCTCATGACTTTAAGACTGTTGTGCAAGTCTTTTATTTGGATTTGAGGATGAATCCTTCAAAAGTAGGAGGAGGGGTTGATATGAACCGAAACATCAAATTATTGGTGAACCTCTGATAGCAAATTCCAAATGATATGAAGACCCTATCACTAGAGGATTTGAAAACCTTAATATTTGAAAATTAGAAACTCAATCAGTGAACCTCAATATCATATTCTAAAATCCCAAATCAATTTGACAACAATCCAAAGGAAAGGACTAGAATTGAATTACCTTTTGATCGAAAATCAAAAAATAAGGAGAACTAGTTCACTCAAGGTGATCAAACTTAAAAAAGGTGGTGATAAGACTATCATCAATTTCTATTCATAGAAAAGCTCTAAAACTTCAATTGTCGAAACTAACTTGAAAAACCTAAAGGCAAGACTTAAATATCCTCCCAATAAAATCCTAATTTATTGTGAAAGGGCTAAATTAACCCTACTTAAATGTTATTAAAAAAATAAAACTGAAAAATATTTAAATTGCATCACAATTTTTAAATAAAATCTAAGCGATAATTTGATGTTTGGTCGATTCATATTAGTTGCATTGGGTTAGTTTGTCAAATTCTTATTAATTTAAAATACTTGATTTTATCGGCCACACATGAATAATAATTAAAATCTTGTAAAACTTAAATGTTTAATATCAAATATCCATGATATCTATCCTAAACTAAACTTTGGACAAAGGCGAACAACGTAACTATTCTAAAAGAAAAACATTGAAAATTCACAATTATCCATCCATAGTCAGTCAAACATAAAACAAAAGTCAAATATTAGTACGTGGTTGGGTTGGGTTGGGTCAACACAAAAGTTAATAAATAAAAGTATTAATCGAGATCCAATCCAAACAGACGAAAACAGAAAAAATTAACTTAACCCAACTCCAGAACAAAAGTAATGCAACCCTATCCAACAAATAGAAAATCTTTAACCCAACCATAAAAGTAACACAACCCAACACTTACTGGGTTAGGTTGTTTGGGTTGTCTAGTCATTTCAATACCTTTAGTTGCTATACTATCAGATATCAGTTGTTCCGTTTACTGTTAATGGGTGATACCTCACTACTTTCCTTGGTTGTTTTTTACTAAACAGGTGGGCTATGTTTGGCTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGACGCGATGTACGAGGTCAATGTTGCTATATTTTTCCATTTTCTGTAATTTATGTATCTACATCATGTAATTCATCTTATAGTCTTCATGAGAGTTTTGTTGTCTGTTACACTTAATTGCCATGCAAGTGTGTGTGCTCCTTGCAATACTTTACTGTTTTTCAGTTATATATAAAAATCTTCCCCCCATTTTTATGAGTCTGTAATTCTAATTCAGTTGGAGCATATTACCTATTCAAACCTTGCTAAAATTCTGTACCTTCATTTATTAGAGGTTCCATTTACATAATAAAAACGTTGAAACTATGATTCATTC

mRNA sequence

ATTTTTCTGAAACTTGGCGACATCATATCCACACCAAACATATCCCCTCCTCAAATCCTAATCCCTTTCTCTTAAACCAAATCCCTTTTTCATCCTTTGTTTTTTTCTTTTTTATTCTTTTGACTTCAATTCTTCCATTTCACTTCCACTCACAATTTTCTGAAATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCCCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGCTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGACGCGATGTACGAGGTCAATGTTGCTATATTTTTCCATTTTCTGTAATTTATGTATCTACATCATGTAATTCATCTTATAGTCTTCATGAGAGTTTTGTTGTCTGTTACACTTAATTGCCATGCAAGTGTGTGTGCTCCTTGCAATACTTTACTGTTTTTCAGTTATATATAAAAATCTTCCCCCCATTTTTATGAGTCTGTAATTCTAATTCAGTTGGAGCATATTACCTATTCAAACCTTGCTAAAATTCTGTACCTTCATTTATTAGAGGTTCCATTTACATAATAAAAACGTTGAAACTATGATTCATTC

Coding sequence (CDS)

ATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCCCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGCTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGA

Protein sequence

MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE

Homology

[Close]

BLAST of CsGy6G004670 vs. NCBI nr
Match: XP_004140959.1 (PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus] >KGN46119.1 hypothetical protein Csa_6G055400 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 3.5e-58
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ 60
           MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKAKELQEYFK 120
           TEGPLRRPSAPSLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKAKELQEYFK
Sbjct: 61  TEGPLRRPSAPSLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKAKELQEYFK 120

Query: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180
           QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID
Sbjct: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180

Query: 181 LE 183
           LE
Sbjct: 181 LE 182

[Close]

BLAST of CsGy6G004670 vs. NCBI nr
Match: XP_022993308.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 5.1e-49
Identity = 160/190 (84.21%), Postives = 165/190 (86.84%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ 60
           MSGACS PF  IKIP+ S  XXXXXXXXXXXXXXXXXXXXXXXXXXXX   F+FTIRSSQ
Sbjct: 1   MSGACSIPFAKIKIPAAS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPS--------XXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKA 120
           TEGPLRRP+APSLR+PS        XXXXXXXXXXXXXXXX      DNVITLEFQR KA
Sbjct: 61  TEGPLRRPAAPSLREPSXXXXXXXXXXXXXXXXXXXXXXXXAYAAKLDNVITLEFQRQKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDE DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEDDQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIIDLE 183
           LSNFGI+DLE
Sbjct: 181 LSNFGIVDLE 189

[Close]

BLAST of CsGy6G004670 vs. NCBI nr
Match: XP_008441491.1 (PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis melo])

HSP 1 Score: 199.1 bits (505), Expect = 1.3e-47
Identity = 170/191 (89.01%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTI 60
           MSGACS PF +IKIPSTS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LFTI
Sbjct: 1   MSGACSIPFANIKIPSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFTI 60

Query: 61  RSSQTEGPLRRPSAP-----SLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLK 120
           RSSQTEGPLRRPSAP           XXXXXXXXXXXXXXXXXXXX  DNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQDNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 183
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 191

[Close]

BLAST of CsGy6G004670 vs. NCBI nr
Match: XP_023535438.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47
Identity = 136/182 (74.73%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ 60
           MSGACSFPF  IKI    XXXXXXXXXXXXXXXXXXXXXXXXX        F+FTIR SQ
Sbjct: 1   MSGACSFPFAKIKI-XXXXXXXXXXXXXXXXXXXXXXXXXXXXIRFSSSKPFVFTIRCSQ 60

Query: 61  TEGPLRRPSAPSLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKAKELQEYFK 120
           T+GP+RRP+APSLR+PS                      DN ITLEFQR KAKELQEYFK
Sbjct: 61  TDGPIRRPAAPSLREPS--PPLKPTPVAQPSAKAYVAKQDNTITLEFQRQKAKELQEYFK 120

Query: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180
           QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGI+D
Sbjct: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVD 179

Query: 181 LE 183
           L+
Sbjct: 181 LD 179

[Close]

BLAST of CsGy6G004670 vs. NCBI nr
Match: XP_022963822.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 197.2 bits (500), Expect = 4.8e-47
Identity = 144/191 (75.39%), Postives = 151/191 (79.06%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ 60
           MSGACSFPF  IKIP T XXXXXXXXXXXXXXXXXXXXXXXXXX       F+FTIRSSQ
Sbjct: 1   MSGACSFPFAKIKIP-TXXXXXXXXXXXXXXXXXXXXXXXXXXXRFSSSKPFVFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRD---------PSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLK 120
           T+GP+RRP+APSLR+           XXXXXX                DN ITLEFQR K
Sbjct: 61  TDGPIRRPAAPSLREXXXXXXXXXXXXXXXXXTAPVAQPSGKAYVAKQDNTITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 183
           LLSNFGI+DL+
Sbjct: 181 LLSNFGIVDLD 190

[Close]

BLAST of CsGy6G004670 vs. TAIR10
Match: AT1G34000.1 (one-helix protein 2)

HSP 1 Score: 154.8 bits (390), Expect = 5.0e-38
Identity = 101/135 (74.81%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 53  LFTIRSSQTEGPLRRPSAP-----SLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEF 112
           +F IR SQTEGPLRRPSAP           XXXXXXXXXXXXXXXX       +V T+EF
Sbjct: 38  VFIIRCSQTEGPLRRPSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXAVAVDGKSVTTVEF 97

Query: 113 QRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 172
           QR KAKELQEYFKQKKL+ A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ VD
Sbjct: 98  QRQKAKELQEYFKQKKLEAAGQGPFFGFQPKNEISNGRWAMFGFAVGMLTEYATGSDLVD 157

Query: 173 QVKILLSNFGIIDLE 183
           QVKILLSNFGI+DLE
Sbjct: 158 QVKILLSNFGILDLE 172

[Close]

BLAST of CsGy6G004670 vs. Swiss-Prot
Match: sp|Q9FEC1|OHP2_ARATH (Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP2 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.9e-37
Identity = 101/135 (74.81%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 53  LFTIRSSQTEGPLRRPSAP-----SLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEF 112
           +F IR SQTEGPLRRPSAP           XXXXXXXXXXXXXXXX       +V T+EF
Sbjct: 38  VFIIRCSQTEGPLRRPSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXAVAVDGKSVTTVEF 97

Query: 113 QRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 172
           QR KAKELQEYFKQKKL+ A QGPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ VD
Sbjct: 98  QRQKAKELQEYFKQKKLEAAGQGPFFGFQPKNEISNGRWAMFGFAVGMLTEYATGSDLVD 157

Query: 173 QVKILLSNFGIIDLE 183
           QVKILLSNFGI+DLE
Sbjct: 158 QVKILLSNFGILDLE 172

[Close]

BLAST of CsGy6G004670 vs. TrEMBL
Match: tr|A0A0A0KBA0|A0A0A0KBA0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055400 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.3e-58
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ 60
           MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKAKELQEYFK 120
           TEGPLRRPSAPSLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKAKELQEYFK
Sbjct: 61  TEGPLRRPSAPSLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLKAKELQEYFK 120

Query: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180
           QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID
Sbjct: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180

Query: 181 LE 183
           LE
Sbjct: 181 LE 182

[Close]

BLAST of CsGy6G004670 vs. TrEMBL
Match: tr|A0A1S3B3J8|A0A1S3B3J8_CUCME (proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC103485601 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.4e-48
Identity = 170/191 (89.01%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MSGACSFPFPSIKIPSTS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLFTI 60
           MSGACS PF +IKIPSTS    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LFTI
Sbjct: 1   MSGACSIPFANIKIPSTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFTI 60

Query: 61  RSSQTEGPLRRPSAP-----SLRDPSXXXXXXXXXXXXXXXXXXXXXXDNVITLEFQRLK 120
           RSSQTEGPLRRPSAP           XXXXXXXXXXXXXXXXXXXX  DNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQDNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 183
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 191

[Close]

BLAST of CsGy6G004670 vs. TrEMBL
Match: tr|I1NH47|I1NH47_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100776918 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 94/133 (70.68%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 55  TIRSSQTEGPLRRPSAPSLRDPS-----XXXXXXXXXXXXXXXXXXXXXXDNVITLEFQR 114
           +IR+SQTEGPLRRP APS+R+PS                            NVITLEFQR
Sbjct: 41  SIRNSQTEGPLRRPVAPSVREPSSSVPQPLKPSAPSQVPPLKASPVAGDDKNVITLEFQR 100

Query: 115 LKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQV 174
            KAKELQEYFKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQV
Sbjct: 101 QKAKELQEYFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQV 160

Query: 175 KILLSNFGIIDLE 183
           KILLSNFGI+DLE
Sbjct: 161 KILLSNFGIVDLE 173

[Close]

BLAST of CsGy6G004670 vs. TrEMBL
Match: tr|A0A0B2SNJ8|A0A0B2SNJ8_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_031711 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 94/133 (70.68%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 55  TIRSSQTEGPLRRPSAPSLRDPS-----XXXXXXXXXXXXXXXXXXXXXXDNVITLEFQR 114
           +IR+SQTEGPLRRP APS+R+PS                            NVITLEFQR
Sbjct: 41  SIRNSQTEGPLRRPVAPSVREPSSSVPQPLKPSAPSQVPPLKASPVAGDDKNVITLEFQR 100

Query: 115 LKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQV 174
            KAKELQEYFKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQV
Sbjct: 101 QKAKELQEYFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQV 160

Query: 175 KILLSNFGIIDLE 183
           KILLSNFGI+DLE
Sbjct: 161 KILLSNFGIVDLE 173

[Close]

BLAST of CsGy6G004670 vs. TrEMBL
Match: tr|A0A1S3V895|A0A1S3V895_VIGRR (uncharacterized protein DDB_G0284459-like isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772461 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41
Identity = 92/133 (69.17%), Postives = 102/133 (76.69%), Query Frame = 0


Query: 55  TIRSSQTEGPLRRPSAPSLRDPS-----XXXXXXXXXXXXXXXXXXXXXXDNVITLEFQR 114
           T+R+SQTEGPLRRP +P +R+PS                            NVITLEFQR
Sbjct: 41  TVRNSQTEGPLRRPVSPPVREPSSTIPQPLKPSPPSQPPLQNPAPVVGDDTNVITLEFQR 100

Query: 115 LKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQV 174
            KAKELQEYFK+KKL+EADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQ+
Sbjct: 101 QKAKELQEYFKKKKLEEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQI 160

Query: 175 KILLSNFGIIDLE 183
           KILLSNFGI+DLE
Sbjct: 161 KILLSNFGIVDLE 173

The following BLAST results are available for this feature:

BLAST of CsGy6G004670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140959.1	3.5e-58	100.00	PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus] >K...	[more]
XP_022993308.1	5.1e-49	84.21	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima]	[more]
XP_008441491.1	1.3e-47	89.01	PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis melo]	[more]
XP_023535438.1	1.7e-47	74.73	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp....	[more]
XP_022963822.1	4.8e-47	75.39	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata]	[more]

BLAST of CsGy6G004670 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34000.1	5.0e-38	74.81	one-helix protein 2	[more]

BLAST of CsGy6G004670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FEC1\|OHP2_ARATH	8.9e-37	74.81	Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of CsGy6G004670 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBA0\|A0A0A0KBA0_CUCSA	2.3e-58	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055400 PE=4 SV=1	[more]
tr\|A0A1S3B3J8\|A0A1S3B3J8_CUCME	8.4e-48	89.01	proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|I1NH47\|I1NH47_SOYBN	1.2e-41	70.68	Uncharacterized protein OS=Glycine max OX=3847 GN=100776918 PE=4 SV=1	[more]
tr\|A0A0B2SNJ8\|A0A0B2SNJ8_GLYSO	1.2e-41	70.68	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_031711 PE=4 SV=1	[more]
tr\|A0A1S3V895\|A0A1S3V895_VIGRR	2.0e-41	69.17	uncharacterized protein DDB_G0284459-like isoform X1 OS=Vigna radiata var. radia...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009642	response to light intensity
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G004670.1	CsGy6G004670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..101
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 40..182
None	No IPR available	PANTHER	PTHR14154:SF22	SUBFAMILY NOT NAMED	coord: 40..182
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 128..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G004670	Cla013639	Watermelon (97103) v1	cgybwmB428
CsGy6G004670	Csa6G055400	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G004670	MELO3C008327	Melon (DHL92) v3.5.1	cgybmeB411
CsGy6G004670	ClCG08G008840	Watermelon (Charleston Gray)	cgybwcgB455
CsGy6G004670	CSPI06G04730	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G004670	CmaCh15G005820	Cucurbita maxima (Rimu)	cgybcmaB740
CsGy6G004670	CmaCh04G024570	Cucurbita maxima (Rimu)	cgybcmaB835
CsGy6G004670	CmoCh15G005890	Cucurbita moschata (Rifu)	cgybcmoB721
CsGy6G004670	CmoCh04G025720	Cucurbita moschata (Rifu)	cgybcmoB815
CsGy6G004670	Lsi08G005690	Bottle gourd (USVL1VR-Ls)	cgyblsiB444
CsGy6G004670	Cp4.1LG01g21260	Cucurbita pepo (Zucchini)	cgybcpeB797
CsGy6G004670	Cp4.1LG13g03820	Cucurbita pepo (Zucchini)	cgybcpeB740
CsGy6G004670	MELO3C029825.2	Melon (DHL92) v3.6.1	cgybmedB409
CsGy6G004670	CsaV3_6G005050	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G004670	Cla97C08G151640	Watermelon (97103) v2	cgybwmbB464
CsGy6G004670	Bhi04G001350	Wax gourd	cgybwgoB546
CsGy6G004670	Carg15800	Silver-seed gourd	carcgybB0066
CsGy6G004670	Carg01615	Silver-seed gourd	carcgybB0824

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None