CmoCh04G025720 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G025720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	High light induced protein like, chloroplast
Location	Cmo_Chr04 : 18826031 .. 18828196 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTGTATTCTTCTGAAACTTGGCCACATCGTATCCACACCAAACACATCCACTCGATTTTGACTTCAATTCCTCTAATCCGAATCCATTTCAGTTCCACAAGAATCTGATAGAGAAATTTCAGAGATACAAGGCGAAATGTCGGGGGCCTGTTCATTCCCCTTTGCCAAAATCAAAATCCCCACCGTTTCCTCGTCGTCGGCGGCCGTTTCTCCGTCGGCTTCGGCTGCCAGTTCCACTTCTTCATCGTCCGCTCACAGTTCCATCAGATTCTCCTCCTCCAAACCTTTTGTCTTCACCATTCGGAGCTCTCAGACCGACGGCCCTATCAGGAGACCGGCGGCTCCTTCTCTGAGAGAGCCGTCGCCGCCTTCGCCGCCGCCTCCTCTCAAGCCGCCTCCTTCTTCGGCGACGGCTCCTGTTGCTCAGCCGTCGGGGAAGGCGTATGTTGCAAAACAGGATAATACGATCACTTTAGAGTTTCAGAGGCAGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGCAGGTGATTTCATTTCCTCTTTTCTCCTCCGATTTTATCGATGATTATTAAATTTTGAAGCTGGATATTCTCCCTAGTGAACTCCATTATAAGTTTTGATTATGTTCTTGTGCCTAAACTAGTGAACTCCATTCCTTTTAGCACAAGTACAAGAATTCTTTCTTTATCTTCATGGATAACCAATCCATTTCCCATGTACTTTGGAGGATCGTTTGCACGACTGCTTCTGTTCCAGAATCATATCCACTGTGGTTTGTGCTGATTTTATTCAAAACCTGCATTCAATTTAGATTAAGAATGTATTTGATTTAGATGTTCGCGACTAGAAGTCAATCCCTATGATCGAAGTTATATTCTCTATAACATAGGTCTTATCTAGGTCTTATCTACGCAAGGAATGGAGAACATACGAAAGCTTTGAAGTATTATTTTCGGCCACTAGAACGAAACCCGTTCTCACCACAATCTACGGCTGTGATCTTTAATGACCTGTAGCACTTCGTAGAAGTAGAAATATGAAGAAATAGGTATGTCTAGATACTTTATTCTAATTGATAGAAGAAGCACAATAAAGATCAAATACTGTAACAGCCCAATCCTACCTAGCAAATATTGTCCTCTTTGAGCTTTCCCTTAAGATTTTTAGAACGCATCTACTAGGGAGAGGTTTCTACACCCTTATAAAGGATACTTTGTTCTACTCTCCAACCGATGTGGGATCCCATAATCCACCCCTTTTAGGGCCCTGCCTCCTCGTTAGCTCTCGTTCCACTCTCCAATCGATGTGGGATCTCACAATCCACCCCTTTCAGGGCCCTGCATCCTCGTTAGCCCGCGTTCCCCTCTCCAATCAACGTGGGATCTCACAATCCACCCCCTTCAGAGCCCTGCGTCCTCGTTAGCCCTCGTTTCTCTCTCCGATCAACGTGGGATCTCACAGATATCCATGTGTTTTGTGTTGATTTTATGGAAATGGAATGTATTTGATTTAGATGTTGCTCCTGAAGATGTGAATCTGACTGAATTGAACTGGTTCTTTGTGTACCTTCATTCCATATTTGACTGAATCTCATAGTTGCTAGTAGCAATCAGCTGTTCATTTTACTCGTTAAGGGTGTCATCATTACTCTTACTGAGACGTTTTTCCCCCAACAGGTGGGCAATGTTTGGTTTTGCTGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTTTCAAATTTTGGGATAGTTGATCTCGATTGACACGATGAACAAGGTCCATGTTTAATTTTTAATGTATCTACATCTTGTAATTCATTTCATAGTGTTCTTGAGATTCGTTGTTTGATACACCAATTGCCATTCAAGTTTGTGCTCCTTGCAATGCTTACTGTTCTTCTGTTTATATATAAAGTTCTTTCTTAGTTATTTATCGGAGAGATTATAATCCATCTCGAAAATATGATAGATTGTCTTATTTTTGTCGATAATAATATCGATAAATGTTGTATTTCTAGTTGCCTACCTTGAAATTTAGATGCACGGATCAAAATGTGATGCAGTGG

mRNA sequence

GGCTTGTATTCTTCTGAAACTTGGCCACATCGTATCCACACCAAACACATCCACTCGATTTTGACTTCAATTCCTCTAATCCGAATCCATTTCAGTTCCACAAGAATCTGATAGAGAAATTTCAGAGATACAAGGCGAAATGTCGGGGGCCTGTTCATTCCCCTTTGCCAAAATCAAAATCCCCACCGTTTCCTCGTCGTCGGCGGCCGTTTCTCCGTCGGCTTCGGCTGCCAGTTCCACTTCTTCATCGTCCGCTCACAGTTCCATCAGATTCTCCTCCTCCAAACCTTTTGTCTTCACCATTCGGAGCTCTCAGACCGACGGCCCTATCAGGAGACCGGCGGCTCCTTCTCTGAGAGAGCCGTCGCCGCCTTCGCCGCCGCCTCCTCTCAAGCCGCCTCCTTCTTCGGCGACGGCTCCTGTTGCTCAGCCGTCGGGGAAGGCGTATGTTGCAAAACAGGATAATACGATCACTTTAGAGTTTCAGAGGCAGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGCAGGTGGGCAATGTTTGGTTTTGCTGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTTTCAAATTTTGGGATAGTTGATCTCGATTGACACGATGAACAAGGTCCATGTTTAATTTTTAATGTATCTACATCTTGTAATTCATTTCATAGTGTTCTTGAGATTCGTTGTTTGATACACCAATTGCCATTCAAGTTTGTGCTCCTTGCAATGCTTACTGTTCTTCTGTTTATATATAAAGTTCTTTCTTAGTTATTTATCGGAGAGATTATAATCCATCTCGAAAATATGATAGATTGTCTTATTTTTGTCGATAATAATATCGATAAATGTTGTATTTCTAGTTGCCTACCTTGAAATTTAGATGCACGGATCAAAATGTGATGCAGTGG

Coding sequence (CDS)

ATGTCGGGGGCCTGTTCATTCCCCTTTGCCAAAATCAAAATCCCCACCGTTTCCTCGTCGTCGGCGGCCGTTTCTCCGTCGGCTTCGGCTGCCAGTTCCACTTCTTCATCGTCCGCTCACAGTTCCATCAGATTCTCCTCCTCCAAACCTTTTGTCTTCACCATTCGGAGCTCTCAGACCGACGGCCCTATCAGGAGACCGGCGGCTCCTTCTCTGAGAGAGCCGTCGCCGCCTTCGCCGCCGCCTCCTCTCAAGCCGCCTCCTTCTTCGGCGACGGCTCCTGTTGCTCAGCCGTCGGGGAAGGCGTATGTTGCAAAACAGGATAATACGATCACTTTAGAGTTTCAGAGGCAGAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGCAGGTGGGCAATGTTTGGTTTTGCTGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTTTCAAATTTTGGGATAGTTGATCTCGATTGA

Homology

[Close]

BLAST of CmoCh04G025720 vs. TrEMBL
Match: A0A0A0KBA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055400 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.6e-64
Identity = 148/194 (76.29%), Postives = 163/194 (84.02%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSS-SAHSSIRFSSSKPFVFTIRSSQ 60
           MSGACSFPF  IKIP+ SSS AA S +AS+++STSSS S+ SS+RFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQ 120
           T+GP+RRP+APSLR+PSPPSPP   PPLKP P   + P             DN ITLEFQ
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP------------SDNVITLEFQ 120

Query: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLD 191
           VKILLSNFGI+DL+
Sbjct: 181 VKILLSNFGIIDLE 182

[Close]

BLAST of CmoCh04G025720 vs. TrEMBL
Match: B9H7V8_POPTR (ONE-HELIX protein 2 OS=Populus trichocarpa GN=POPTR_0005s21790g PE=4 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 8.9e-55
Identity = 137/195 (70.26%), Postives = 162/195 (83.08%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFS-SSKPFVFTIRSSQ 60
           MS A S P+ KI  P+ SSSS++   S S++SSTSS+S++   RFS ++KP++ TIRSSQ
Sbjct: 1   MSVASSIPYIKIPNPSSSSSSSSSCSSLSSSSSTSSTSSY--YRFSTTTKPYIVTIRSSQ 60

Query: 61  TDGPIRRPAAPSLREPSPP-SPPPPLKP-PPSSATAPVA-QPSGKAYVAKQD-NTITLEF 120
            +GP+RRP AP LREPSPP SP PPLKP PPSS ++PVA  P   A VA +D N +TLEF
Sbjct: 61  AEGPVRRPVAPPLREPSPPASPSPPLKPVPPSSPSSPVAPPPKPAAKVAVEDKNVMTLEF 120

Query: 121 QRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 180
           QRQKAKELQEYFKQKKL+EADQGPFFGF GKNEI+NGRWAMFGFAVG+LTEYATGS+FVD
Sbjct: 121 QRQKAKELQEYFKQKKLEEADQGPFFGFFGKNEIANGRWAMFGFAVGMLTEYATGSDFVD 180

Query: 181 QVKILLSNFGIVDLD 191
           QVKILLSNFGI+DL+
Sbjct: 181 QVKILLSNFGIIDLE 193

[Close]

BLAST of CmoCh04G025720 vs. TrEMBL
Match: A0A067KWB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08332 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-51
Identity = 132/192 (68.75%), Postives = 151/192 (78.65%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPF-VFTIRSSQ 60
           MS A SFP+  IKIP  SSS +  SPS    SS+SS+S  S  +FSS+  F   TIRSSQ
Sbjct: 1   MSLASSFPY--IKIPNPSSSCS--SPS----SSSSSTSTSSCFKFSSTTKFCALTIRSSQ 60

Query: 61  TDGPIRRPAAPSLREPSPPSPP-PPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQRQ 120
            +GPIRRP AP LREPSPPSPP PPLKP P S   P  +P+ K  +    N ITLEFQRQ
Sbjct: 61  AEGPIRRPVAPPLREPSPPSPPSPPLKPVPPSTVPPPPKPAAKVGL-DDKNVITLEFQRQ 120

Query: 121 KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVK 180
           KAKELQEYFKQKKL+E+D+GPFFGF+GKNEI+NGRWAMFGFAVG+LTEYATGS+FVDQVK
Sbjct: 121 KAKELQEYFKQKKLEESDRGPFFGFVGKNEITNGRWAMFGFAVGMLTEYATGSDFVDQVK 180

Query: 181 ILLSNFGIVDLD 191
           ILLSNFGI+DL+
Sbjct: 181 ILLSNFGIIDLE 183

[Close]

BLAST of CmoCh04G025720 vs. TrEMBL
Match: B9SEA9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0961480 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-51
Identity = 134/193 (69.43%), Postives = 150/193 (77.72%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSS-KPFVFTIRSSQ 60
           MS A S P+  IKIP  SSS +  SPS    SS+S++S  SS RF+++ KP   TIRSSQ
Sbjct: 1   MSVASSIPY--IKIPNPSSSCS--SPS----SSSSATSTSSSFRFATTVKPCALTIRSSQ 60

Query: 61  TDGPIRRPAAPSLREPSPPSPPP-PLKP-PPSSATAPVAQPSGKAYVAKQDNTITLEFQR 120
            DGPIRRP AP LREPSPPS PP PLKP PPSS  AP         V +  N ITLEFQR
Sbjct: 61  ADGPIRRPVAPPLREPSPPSSPPSPLKPVPPSSPVAPPPPKPASQVVLEDKNAITLEFQR 120

Query: 121 QKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQV 180
           QKAKELQ+YFKQKKL+EA QGPFFGF+GKNEI+NGRWAMFGFAVGLLTEYATGS+FVDQV
Sbjct: 121 QKAKELQDYFKQKKLEEAAQGPFFGFVGKNEIANGRWAMFGFAVGLLTEYATGSDFVDQV 180

Query: 181 KILLSNFGIVDLD 191
           KILLSNFGI+DL+
Sbjct: 181 KILLSNFGILDLE 185

[Close]

BLAST of CmoCh04G025720 vs. TrEMBL
Match: I1JDC2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G079400 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.3e-49
Identity = 134/195 (68.72%), Postives = 145/195 (74.36%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPF-VFTIRSSQ 60
           MS ACS P   IKIPT SSS           S TSSSS++S +RFSSSKP    TIR+SQ
Sbjct: 1   MSMACSIPC--IKIPTRSSSP----------SCTSSSSSYS-LRFSSSKPHNSVTIRNSQ 60

Query: 61  TDGPIRRPAAPSLREPSPPSPPPPLKPP--PSSATAPVAQPSGK--AYVAKQDNTITLEF 120
            +GPIRRP AP +REPS  S  P L+ P  PS   +P + P  K    V    N ITLEF
Sbjct: 61  AEGPIRRPVAPPIREPSSSSSAPQLQKPTLPSQPPSPSSSPPQKPATVVGDDKNVITLEF 120

Query: 121 QRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 180
           QRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVD
Sbjct: 121 QRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVD 180

Query: 181 QVKILLSNFGIVDLD 191
           QVKILLSNFGIVDL+
Sbjct: 181 QVKILLSNFGIVDLE 182

[Close]

BLAST of CmoCh04G025720 vs. TAIR10
Match: AT1G34000.1 (AT1G34000.1 one-helix protein 2)

HSP 1 Score: 177.9 bits (450), Expect = 5.7e-45
Identity = 110/164 (67.07%), Postives = 126/164 (76.83%), Query Frame = 1


Query: 31  ASSTSSSSAHSSIRFSSS-KPFVFTIRSSQTDGPIRRPAAP-SLREPSPPSPP--PPLKP 90
           +SS+SSS+A SS RFS++ KP VF IR SQT+GP+RRP+AP +LREP  P PP  P   P
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQKPVPPSQPSSSP 75

Query: 91  PPSSATAPVAQPSGKAYVAKQDNTITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGK 150
           PPS        P  KA      +  T+EFQRQKAKELQEYFKQKKL+ A QGPFFGF  K
Sbjct: 76  PPSP-------PPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQPK 135

Query: 151 NEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLD 191
           NEISNGRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DL+
Sbjct: 136 NEISNGRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

[Close]

BLAST of CmoCh04G025720 vs. NCBI nr
Match: gi|659081745|ref|XP_008441491.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 1.9e-66
Identity = 155/198 (78.28%), Postives = 168/198 (84.85%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAV----SPSASAASSTSSSSA-HSSIRFSSSKPFVFTI 60
           MSGACS PFA IKIP+ SSS AA     SPSASA+SS SSSS+ HSS+RF SSKPF+FTI
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFHSSKPFLFTI 60

Query: 61  RSSQTDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSATAPVAQPSGKAYVAKQDNTIT 120
           RSSQT+GP+RRP+APSLR+PSPPSPP   PPLKP P S + P       + V KQDN IT
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPPSQSPP-------SPVLKQDNVIT 120

Query: 121 LEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSN 180
           LEFQR KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSN
Sbjct: 121 LEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSN 180

Query: 181 FVDQVKILLSNFGIVDLD 191
           FVDQVKILLSNFGI+DL+
Sbjct: 181 FVDQVKILLSNFGIIDLE 191

[Close]

BLAST of CmoCh04G025720 vs. NCBI nr
Match: gi|449446399|ref|XP_004140959.1| (PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 5.2e-64
Identity = 148/194 (76.29%), Postives = 163/194 (84.02%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSS-SAHSSIRFSSSKPFVFTIRSSQ 60
           MSGACSFPF  IKIP+ SSS AA S +AS+++STSSS S+ SS+RFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TDGPIRRPAAPSLREPSPPSPP---PPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQ 120
           T+GP+RRP+APSLR+PSPPSPP   PPLKP P   + P             DN ITLEFQ
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP------------SDNVITLEFQ 120

Query: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLD 191
           VKILLSNFGI+DL+
Sbjct: 181 VKILLSNFGIIDLE 182

[Close]

BLAST of CmoCh04G025720 vs. NCBI nr
Match: gi|566172587|ref|XP_002307511.2| (ONE-HELIX protein 2 [Populus trichocarpa])

HSP 1 Score: 221.5 bits (563), Expect = 1.3e-54
Identity = 137/195 (70.26%), Postives = 162/195 (83.08%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFS-SSKPFVFTIRSSQ 60
           MS A S P+ KI  P+ SSSS++   S S++SSTSS+S++   RFS ++KP++ TIRSSQ
Sbjct: 1   MSVASSIPYIKIPNPSSSSSSSSSCSSLSSSSSTSSTSSY--YRFSTTTKPYIVTIRSSQ 60

Query: 61  TDGPIRRPAAPSLREPSPP-SPPPPLKP-PPSSATAPVA-QPSGKAYVAKQD-NTITLEF 120
            +GP+RRP AP LREPSPP SP PPLKP PPSS ++PVA  P   A VA +D N +TLEF
Sbjct: 61  AEGPVRRPVAPPLREPSPPASPSPPLKPVPPSSPSSPVAPPPKPAAKVAVEDKNVMTLEF 120

Query: 121 QRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 180
           QRQKAKELQEYFKQKKL+EADQGPFFGF GKNEI+NGRWAMFGFAVG+LTEYATGS+FVD
Sbjct: 121 QRQKAKELQEYFKQKKLEEADQGPFFGFFGKNEIANGRWAMFGFAVGMLTEYATGSDFVD 180

Query: 181 QVKILLSNFGIVDLD 191
           QVKILLSNFGI+DL+
Sbjct: 181 QVKILLSNFGIIDLE 193

[Close]

BLAST of CmoCh04G025720 vs. NCBI nr
Match: gi|1009138300|ref|XP_015886512.1| (PREDICTED: probable inactive serine/threonine-protein kinase slob2 [Ziziphus jujuba])

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54
Identity = 138/199 (69.35%), Postives = 160/199 (80.40%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQT 60
           MS A SFPF  IKIPT   SS+A S S S++S+TSS+S H S  FSS+K  + TIRSSQT
Sbjct: 1   MSVASSFPF--IKIPT---SSSAPSCSYSSSSTTSSTSHHPSSWFSSTKLSIKTIRSSQT 60

Query: 61  DGPIRRPAAPSLREPSPP---SPPPPLKPPPSSATAPVAQP------SGKAYVAKQDNTI 120
           +GPIRRP APS+REPSPP    P PP +PPPSS+++P + P      SG   V  ++  I
Sbjct: 61  EGPIRRPVAPSVREPSPPPPLKPTPPSQPPPSSSSSPPSLPPKPAPVSGLVSVDDKNAVI 120

Query: 121 TLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS 180
           TLEFQRQKAKELQ+YFKQKKLD+ADQGPFFGF+GKNEISNGRWAMFGFAVG+LTEYATGS
Sbjct: 121 TLEFQRQKAKELQDYFKQKKLDDADQGPFFGFVGKNEISNGRWAMFGFAVGMLTEYATGS 180

Query: 181 NFVDQVKILLSNFGIVDLD 191
           +FVDQVKILLSNFGIVDL+
Sbjct: 181 DFVDQVKILLSNFGIVDLE 194

[Close]

BLAST of CmoCh04G025720 vs. NCBI nr
Match: gi|743901884|ref|XP_011044269.1| (PREDICTED: PH domain-containing protein DDB_G0287875 [Populus euphratica])

HSP 1 Score: 219.9 bits (559), Expect = 3.7e-54
Identity = 138/195 (70.77%), Postives = 162/195 (83.08%), Query Frame = 1


Query: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSS-KPFVFTIRSSQ 60
           MS A S P+  IKIP  SSSS++   S S++SSTSS+S++   RFS++ KP++ TIRSSQ
Sbjct: 1   MSVASSIPY--IKIPNPSSSSSSSCSSLSSSSSTSSTSSY--YRFSTTTKPYIVTIRSSQ 60

Query: 61  TDGPIRRPAAPSLREPSPP-SPPPPLKP-PPSSATAPVAQP-SGKAYVAKQD-NTITLEF 120
            +GP+RRP AP LREPSPP SP PPLKP PPSS ++PVA P    A VA +D N +TLEF
Sbjct: 61  AEGPVRRPVAPPLREPSPPASPSPPLKPVPPSSLSSPVAPPPKPAAKVAVEDKNVMTLEF 120

Query: 121 QRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 180
           QRQKAKELQEYFKQKKL+EADQGPFFGF GKNEI+NGRWAMFGFAVG+LTEYATGS+FVD
Sbjct: 121 QRQKAKELQEYFKQKKLEEADQGPFFGFFGKNEIANGRWAMFGFAVGMLTEYATGSDFVD 180

Query: 181 QVKILLSNFGIVDLD 191
           QVKILLSNFGI+DL+
Sbjct: 181 QVKILLSNFGIIDLE 191

The following BLAST results are available for this feature:

BLAST of CmoCh04G025720 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G025720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBA0_CUCSA	3.6e-64	76.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055400 PE=4 SV=1	[more]
B9H7V8_POPTR	8.9e-55	70.26	ONE-HELIX protein 2 OS=Populus trichocarpa GN=POPTR_0005s21790g PE=4 SV=2	[more]
A0A067KWB8_JATCU	1.6e-51	68.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08332 PE=4 SV=1	[more]
B9SEA9_RICCO	2.7e-51	69.43	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0961480 PE=4 SV=1	[more]
I1JDC2_SOYBN	4.3e-49	68.72	Uncharacterized protein OS=Glycine max GN=GLYMA_02G079400 PE=4 SV=1	[more]

BLAST of CmoCh04G025720 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34000.1	5.7e-45	67.07	one-helix protein 2	[more]

BLAST of CmoCh04G025720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081745\|ref\|XP_008441491.1\|	1.9e-66	78.28	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|449446399\|ref\|XP_004140959.1\|	5.2e-64	76.29	PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus]	[more]
gi\|566172587\|ref\|XP_002307511.2\|	1.3e-54	70.26	ONE-HELIX protein 2 [Populus trichocarpa]	[more]
gi\|1009138300\|ref\|XP_015886512.1\|	1.7e-54	69.35	PREDICTED: probable inactive serine/threonine-protein kinase slob2 [Ziziphus juj...	[more]
gi\|743901884\|ref\|XP_011044269.1\|	3.7e-54	70.77	PREDICTED: PH domain-containing protein DDB_G0287875 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009637	response to blue light
biological_process	GO:0010218	response to far red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010114	response to red light
biological_process	GO:0009744	response to sucrose
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009642	response to light intensity
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G025720.1	CmoCh04G025720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 136..179 score: 2.3
None	No IPR available	GENE3D	G3DSA:1.20.1620.10		coord: 145..177 score: 1.
None	No IPR available	PANTHER	PTHR33401	FAMILY NOT NAMED	coord: 108..190 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G025720	Cucsa.363880	Cucumber (Gy14) v1	cgycmoB1004
CmoCh04G025720	CmaCh15G005820	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G025720	CmaCh04G024570	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G025720	Cla013639	Watermelon (97103) v1	cmowmB663
CmoCh04G025720	Csa6G055400	Cucumber (Chinese Long) v2	cmocuB760
CmoCh04G025720	MELO3C008327	Melon (DHL92) v3.5.1	cmomeB672
CmoCh04G025720	ClCG08G008840	Watermelon (Charleston Gray)	cmowcgB682
CmoCh04G025720	CSPI06G04730	Wild cucumber (PI 183967)	cmocpiB769
CmoCh04G025720	Lsi08G005690	Bottle gourd (USVL1VR-Ls)	cmolsiB697
CmoCh04G025720	Cp4.1LG13g03820	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G025720	Cp4.1LG01g21260	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G025720	MELO3C029825.2	Melon (DHL92) v3.6.1	cmomedB762
CmoCh04G025720	CsaV3_6G005050	Cucumber (Chinese Long) v3	cmocucB0898
CmoCh04G025720	Cla97C08G151640	Watermelon (97103) v2	cmowmbB762
CmoCh04G025720	Bhi04G001350	Wax gourd	cmowgoB0865
CmoCh04G025720	CsGy6G004670	Cucumber (Gy14) v2	cgybcmoB815
CmoCh04G025720	Carg01615	Silver-seed gourd	carcmoB1121
CmoCh04G025720	Carg15800	Silver-seed gourd	carcmoB0094

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G025720	CmoCh15G005890	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G025720	Cucurbita moschata (Rifu)	cmocmoB029
CmoCh04G025720	Cucurbita moschata (Rifu)	cmocmoB367
CmoCh04G025720	Cucumber (Gy14) v1	cgycmoB0137
CmoCh04G025720	Cucumber (Chinese Long) v2	cmocuB771
CmoCh04G025720	Watermelon (Charleston Gray)	cmowcgB605
CmoCh04G025720	Watermelon (Charleston Gray)	cmowcgB680
CmoCh04G025720	Watermelon (97103) v1	cmowmB661
CmoCh04G025720	Cucurbita pepo (Zucchini)	cmocpeB708
CmoCh04G025720	Bottle gourd (USVL1VR-Ls)	cmolsiB643
CmoCh04G025720	Cucumber (Gy14) v2	cgybcmoB950
CmoCh04G025720	Cucumber (Chinese Long) v3	cmocucB0902
CmoCh04G025720	Cucumber (Chinese Long) v3	cmocucB0911
CmoCh04G025720	Watermelon (97103) v2	cmowmbB760
CmoCh04G025720	Watermelon (97103) v2	cmowmbB770