CSPI06G04730 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G04730
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ONE-HELIX protein 2
Location	Chr6 : 4297481 .. 4300486 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGACATCATATCCACACCAAACATATCCCCTCCTCAAATCCTAATCCCTTTCTCTTAAACCAAATCCCTTTTTCATCCTTTGTTTTTTTCTTTTTTATTCTTTTGACTTCAATTCTTCCATTTCACTTCCACTCACAATTTTCTGAAATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCGCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTCCATTTCATTTCCCCATCCTTTTTTTTTTCTTCTTTTTCTTTGATTCTGTTGTGGTTGCTTAAATTTGAACGGGATTTATTCTTGTTTGTTCGTTATGATATTTCTGAAGCACTAAAAAGAAGAAATAAGTTTTGAGAATACAAGCATAAAATTTTAATTTTTAAGAGAGAATACTAAAAGTGAAATGGTTATTAAATTGTATATGTTTAACCATCAGGTCAAAGGCTTTTCTTGATTTGTAGAAGTAAGCTACACTGTGGTGTCAACTTCCATAAGGCTTTAAAAACTTATTTGACTAGTCCCCAGTTAATTTTTGCTTGTAGTTGCAAGTTTTGATTATGTTCAAGTGCCAAAACTCCATTTCTTTCTTTTATCTTTATGGACAACCAATTCATTTCAAATAGAGTCGTTTGCAACACTTTCTCTGTTTGAGCATTCATAGTTTGCATCTGATTGAGTTAAAAACAGTCCCTATGTGTACCTTTGTTTCGTTCCATAATGTACTGGGTGTCATAGTTGTCAGTAGGGATTTACACGGGATGAGGTGGCTTTCGAAGGTGTCCAACCCAACTCTTAAGATTCGAGTTGAGTTGGTGATATGGAAACCTATGATTTGAAAATTAGGAACCCACCTCTAATATAAATTCGAGTTAATTTAAAACCTCAATTCAAAGATGATATGAACTGGTATGTCTTTGTGTTGCCTCCGGGACCAATCACACGTTCCAGAACTAAGAAAATACAGTTAGCATTGAATTCTCACGTTCAAGATCAGGAAGTGCACTCAATTGAGGAGAGAAGATTATAATCGGAGTCCGTTGACGCTACAAGATGAAACCAATTGACCTTTGACATCTCATGACTTTAAGACTGTTGTGCAAGTCATTTATTTGGATTTGAGGATGAATCCTTCAAAAGTAGGAGGAGGGGTTGATATGAACCGAAACATCAAATTATTGGTGAACCTCTAATAGCAAATTCCAAATGATATGAAGACCCTGTCACTGGAGGATTTGAAAACCTTAATATTTGAAAATTAGGAACTCAATTAGTGAACCTCAATATCATATTCTAAAATCCCAAATCAATTTGACACAACAATCCAAAGGAAAGGACTAGAATTGAATTACCTTTTGATCGAAAATCAATAAATAAGGAGAACTAGTTCACTCAAGGTGATCAAACTTAAAAAAGGTGGTGATAAGACTATCATCGATTTCTATTCATAGAAAAGCTCTAGAACTTCAATTGTCGAAACTAACTTGAAAAACCTAAAGGCAAGACTTAAATATCCTCCCAATAAAATCCTAATTTATTGTGAAAGGGCTAAATTAACCCTACTTAAATGTTATTAAAAAGAATAAAACTGAAAAATATTAAAATTGTATCACAATCTTTAAATAAAATCTAAGCAATAATTTGATGTTTGGTCGATTCATATTAGTTGGATTGAGTTAGTTTGTCAAATTCTTATTAATTTAAAATACTTGATTTTATCGGCCACACATGAATAATAATTAAAATCTTGTAAAACTTAAATGTTTAATATCAAATATCCATGATATCTATCCTAAACTTTGGACAAAGGCGAACATCGTAACTATTCTAAAAGAAAAACATTGAAAATTCACAATTATCTATCCATAGTCAGTCAAACATAAAACAAAGGCAAATATTAGTACGTGGTTGGGTTGGGTTGGGTCAACACTAAAAATAATAAATAAAAATATTAATCGAGATCCAATCCAAACAGACGAAAACAGAAAAAATTAACTTAACCCAACTCCAGAACAAAAGTAATGCAACCCTATCCAACAAATAGAAAATCTTTAACCCAACCATAAAAGTAACACAACCCAACACTTACAGTCTGGGTTAGGTTGTTTGGGTTGTCGAGTCATTTCAATACCTTTAGTTGCTATACTATCAGATATCAGTTGTTCCGTTTACTGTTAATGGGTGATACCTCACTACTTTCCTTGGTTGTTTTTTACTAAACAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGACGCGATGTACGAGGTCAATGTTGCTATATTTTTCCATTTTCTGTAATTTATGTATCTACATCATGTAATTCATCTTATAGTCTTCATGAGAGTTTTGTTGTCTGTTACACTTAATTGCCATGCAAGTGTGTGTGCTCCTTGCAATACTTTACTGTTTTTCAGTTATATATAAAAATCTTCCCCCCTTTTTTATGAGTCTGTAATTCTAATTCAGTTGGAGCATATTACCTATTCAAACCTTGCTAAAATTCTGTACCTTCATTTATTAGAGGTTCCATTTACATAATAAAAACGTTGAAACTAT

mRNA sequence

ATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCGCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGA

Coding sequence (CDS)

ATGTCTGGGGCTTGTTCATTCCCCTTCCCCAGTATCAAAATCCCCTCCACTTCCTCCTCACCGGCCGCCACCTCCGCTGCCGCTTCTTCCTCCGCCTCCACCTCCTCTTCAGCTTCTTCTTCATCCTCCCTCCGATTCTCCTCCTCCAAGCCTTTCCTCTTCACCATTCGAAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCTCCGCTCCTTCTCTCAGAGACCCCTCCCCGCCCTCTCCCCCTTCCCTGACGCCTCCTCTCAAGCCTACTCCTCCCCCGCAATCCCCTCCGTCGGATAATGTGATCACATTGGAGTTTCAGCGGCTCAAGGCTAAGGAGCTTCAGGAGTATTTTAAGCAGAAGAAGCTTGATGAAGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCTAATGGAAGGTGGGCTATGTTTGGTTTCGCTGTTGGATTACTGACTGAGTATGCAACTGGTTCGAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAATAGATCTCGAATGA

Homology

[Close]

BLAST of CSPI06G04730 vs. TrEMBL
Match: A0A0A0KBA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055400 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.2e-86
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120
           TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120

Query: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180
           QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID
Sbjct: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180

Query: 181 LE 183
           LE
Sbjct: 181 LE 182

[Close]

BLAST of CSPI06G04730 vs. TrEMBL
Match: A0A067KWB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08332 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.4e-51
Identity = 133/194 (68.56%), Postives = 149/194 (76.80%), Query Frame = 1


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFL-FTIRSS 60
           MS A SFP+  IKIP+ SSS        SS +S+SSS S+SS  +FSS+  F   TIRSS
Sbjct: 1   MSLASSFPY--IKIPNPSSS-------CSSPSSSSSSTSTSSCFKFSSTTKFCALTIRSS 60

Query: 61  QTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP-----------SDNVITLEFQ 120
           Q EGP+RRP AP LR+PSPPSPPS  PPLKP PP   PP             NVITLEFQ
Sbjct: 61  QAEGPIRRPVAPPLREPSPPSPPS--PPLKPVPPSTVPPPPKPAAKVGLDDKNVITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKL+E+D+GPFFGF+GKNEI+NGRWAMFGFAVG+LTEYATGS+FVDQ
Sbjct: 121 RQKAKELQEYFKQKKLEESDRGPFFGFVGKNEITNGRWAMFGFAVGMLTEYATGSDFVDQ 180

Query: 181 VKILLSNFGIIDLE 183
           VKILLSNFGIIDLE
Sbjct: 181 VKILLSNFGIIDLE 183

[Close]

BLAST of CSPI06G04730 vs. TrEMBL
Match: I1LDD9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G222100 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.7e-51
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 9   FPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFL-FTIRSSQTEGPLRR 68
           FP IKIP+ SSSP+ TS             SS+SS RFSSSKP+   +IR+SQTEGPLRR
Sbjct: 50  FPCIKIPACSSSPSCTS-------------SSTSSFRFSSSKPYAAVSIRNSQTEGPLRR 109

Query: 69  PSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP---------SDNVITLEFQRLKAKELQEY 128
           P AP +R+PS     S+  PLKP+PP Q PP          +NVITLEFQR KAKELQEY
Sbjct: 110 PVAPPVREPS----SSVPQPLKPSPPSQVPPQKASPVAGDDNNVITLEFQRQKAKELQEY 169

Query: 129 FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGI 183
           FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQVKILLSNFGI
Sbjct: 170 FKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKILLSNFGI 216

[Close]

BLAST of CSPI06G04730 vs. TrEMBL
Match: C6TKA6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.7e-51
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 9   FPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFL-FTIRSSQTEGPLRR 68
           FP IKIP+ SSSP+ TS             SS+SS RFSSSKP+   +IR+SQTEGPLRR
Sbjct: 7   FPCIKIPACSSSPSCTS-------------SSTSSFRFSSSKPYAAVSIRNSQTEGPLRR 66

Query: 69  PSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP---------SDNVITLEFQRLKAKELQEY 128
           P AP +R+PS     S+  PLKP+PP Q PP          +NVITLEFQR KAKELQEY
Sbjct: 67  PVAPPVREPS----SSVPQPLKPSPPSQVPPQKASPVAGDDNNVITLEFQRQKAKELQEY 126

Query: 129 FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGI 183
           FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQVKILLSNFGI
Sbjct: 127 FKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKILLSNFGI 173

[Close]

BLAST of CSPI06G04730 vs. TrEMBL
Match: A0A0B2QAM1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011508 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 7.5e-51
Identity = 126/184 (68.48%), Postives = 141/184 (76.63%), Query Frame = 1


Query: 9   FPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFL-FTIRSSQTEGPLRR 68
           FP IKIP+ SSSP  TS             SS+SS RFSSSKP+   +IR+SQTEGPLRR
Sbjct: 7   FPCIKIPACSSSPTCTS-------------SSTSSFRFSSSKPYAAVSIRNSQTEGPLRR 66

Query: 69  PSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP---------SDNVITLEFQRLKAKELQEY 128
           P AP +R+PS     S+  PLKP+PP Q PP          +NVITLEFQR KAKELQEY
Sbjct: 67  PVAPPVREPS----SSVPQPLKPSPPSQVPPQKASPVAGDDNNVITLEFQRQKAKELQEY 126

Query: 129 FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGI 183
           FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQVKILLSNFGI
Sbjct: 127 FKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKILLSNFGI 173

[Close]

BLAST of CSPI06G04730 vs. TAIR10
Match: AT1G34000.1 (AT1G34000.1 one-helix protein 2)

HSP 1 Score: 181.0 bits (458), Expect = 6.5e-46
Identity = 112/159 (70.44%), Postives = 131/159 (82.39%), Query Frame = 1


Query: 32  ASTSSSASSSSSLRFSSS-KPFLFTIRSSQTEGPLRRPSAP-SLRDPS---PPSPPSLTP 91
           +S+SSS+++SSS RFS++ KP +F IR SQTEGPLRRPSAP +LR+P    PPS PS +P
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQKPVPPSQPSSSP 75

Query: 92  PLKPTPPPQSPPS---DNVITLEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISN 151
           P  P+PPPQ   +    +V T+EFQR KAKELQEYFKQKKL+ A QGPFFGF  KNEISN
Sbjct: 76  P--PSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQPKNEISN 135

Query: 152 GRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIIDLE 183
           GRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 136 GRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: gi|449446399|ref|XP_004140959.1| (PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 6.0e-86
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120
           TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDNVITLEFQRLKAKELQEYFK 120

Query: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180
           QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID
Sbjct: 121 QKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIID 180

Query: 181 LE 183
           LE
Sbjct: 181 LE 182

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: gi|659081745|ref|XP_008441491.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 9.7e-76
Identity = 171/191 (89.53%), Postives = 175/191 (91.62%), Query Frame = 1


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSL----RFSSSKPFLFTI 60
           MSGACS PF +IKIPSTSSSPAAT++AAS SAS SSSASSSSSL    RF SSKPFLFTI
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFHSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPS-----DNVITLEFQRLK 120
           RSSQTEGPLRRPSAPSLRDPSPPSPPS TPPLKP+PP QSPPS     DNVITLEFQRLK
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPPSQSPPSPVLKQDNVITLEFQRLK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIIDLE 183
           LLSNFGIIDLE
Sbjct: 181 LLSNFGIIDLE 191

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: gi|802607712|ref|XP_012073948.1| (PREDICTED: uncharacterized protein DDB_G0284459 [Jatropha curcas])

HSP 1 Score: 209.5 bits (532), Expect = 4.8e-51
Identity = 133/194 (68.56%), Postives = 149/194 (76.80%), Query Frame = 1


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFL-FTIRSS 60
           MS A SFP+  IKIP+ SSS        SS +S+SSS S+SS  +FSS+  F   TIRSS
Sbjct: 1   MSLASSFPY--IKIPNPSSS-------CSSPSSSSSSTSTSSCFKFSSTTKFCALTIRSS 60

Query: 61  QTEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP-----------SDNVITLEFQ 120
           Q EGP+RRP AP LR+PSPPSPPS  PPLKP PP   PP             NVITLEFQ
Sbjct: 61  QAEGPIRRPVAPPLREPSPPSPPS--PPLKPVPPSTVPPPPKPAAKVGLDDKNVITLEFQ 120

Query: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKL+E+D+GPFFGF+GKNEI+NGRWAMFGFAVG+LTEYATGS+FVDQ
Sbjct: 121 RQKAKELQEYFKQKKLEESDRGPFFGFVGKNEITNGRWAMFGFAVGMLTEYATGSDFVDQ 180

Query: 181 VKILLSNFGIIDLE 183
           VKILLSNFGIIDLE
Sbjct: 181 VKILLSNFGIIDLE 183

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: gi|1009138300|ref|XP_015886512.1| (PREDICTED: probable inactive serine/threonine-protein kinase slob2 [Ziziphus jujuba])

HSP 1 Score: 209.5 bits (532), Expect = 4.8e-51
Identity = 133/206 (64.56%), Postives = 152/206 (73.79%), Query Frame = 1


Query: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60
           MS A SFPF  IKIP++SS+P+ +     SS+ST+SS S   S  FSS+K  + TIRSSQ
Sbjct: 1   MSVASSFPF--IKIPTSSSAPSCSY----SSSSTTSSTSHHPSSWFSSTKLSIKTIRSSQ 60

Query: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPPQSPPSDN------------------- 120
           TEGP+RRP APS+R+PSPP      PPLKPTPP Q PPS +                   
Sbjct: 61  TEGPIRRPVAPSVREPSPP------PPLKPTPPSQPPPSSSSSPPSLPPKPAPVSGLVSV 120

Query: 121 -----VITLEFQRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLL 180
                VITLEFQR KAKELQ+YFKQKKLD+ADQGPFFGF+GKNEISNGRWAMFGFAVG+L
Sbjct: 121 DDKNAVITLEFQRQKAKELQDYFKQKKLDDADQGPFFGFVGKNEISNGRWAMFGFAVGML 180

Query: 181 TEYATGSNFVDQVKILLSNFGIIDLE 183
           TEYATGS+FVDQVKILLSNFGI+DLE
Sbjct: 181 TEYATGSDFVDQVKILLSNFGIVDLE 194

[Close]

BLAST of CSPI06G04730 vs. NCBI nr
Match: gi|947086378|gb|KRH35099.1| (hypothetical protein GLYMA_10G222100 [Glycine max])

HSP 1 Score: 208.8 bits (530), Expect = 8.2e-51
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 9   FPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFL-FTIRSSQTEGPLRR 68
           FP IKIP+ SSSP+ TS             SS+SS RFSSSKP+   +IR+SQTEGPLRR
Sbjct: 50  FPCIKIPACSSSPSCTS-------------SSTSSFRFSSSKPYAAVSIRNSQTEGPLRR 109

Query: 69  PSAPSLRDPSPPSPPSLTPPLKPTPPPQSPP---------SDNVITLEFQRLKAKELQEY 128
           P AP +R+PS     S+  PLKP+PP Q PP          +NVITLEFQR KAKELQEY
Sbjct: 110 PVAPPVREPS----SSVPQPLKPSPPSQVPPQKASPVAGDDNNVITLEFQRQKAKELQEY 169

Query: 129 FKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGI 183
           FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQVKILLSNFGI
Sbjct: 170 FKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQVKILLSNFGI 216

The following BLAST results are available for this feature:

BLAST of CSPI06G04730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G04730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBA0_CUCSA	4.2e-86	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055400 PE=4 SV=1	[more]
A0A067KWB8_JATCU	3.4e-51	68.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08332 PE=4 SV=1	[more]
I1LDD9_SOYBN	5.7e-51	68.48	Uncharacterized protein OS=Glycine max GN=GLYMA_10G222100 PE=4 SV=1	[more]
C6TKA6_SOYBN	5.7e-51	68.48	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
A0A0B2QAM1_GLYSO	7.5e-51	68.48	Uncharacterized protein OS=Glycine soja GN=glysoja_011508 PE=4 SV=1	[more]

BLAST of CSPI06G04730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G34000.1	6.5e-46	70.44	one-helix protein 2	[more]

BLAST of CSPI06G04730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446399\|ref\|XP_004140959.1\|	6.0e-86	100.00	PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus]	[more]
gi\|659081745\|ref\|XP_008441491.1\|	9.7e-76	89.53	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|802607712\|ref\|XP_012073948.1\|	4.8e-51	68.56	PREDICTED: uncharacterized protein DDB_G0284459 [Jatropha curcas]	[more]
gi\|1009138300\|ref\|XP_015886512.1\|	4.8e-51	64.56	PREDICTED: probable inactive serine/threonine-protein kinase slob2 [Ziziphus juj...	[more]
gi\|947086378\|gb\|KRH35099.1\|	8.2e-51	68.48	hypothetical protein GLYMA_10G222100 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009637	response to blue light
biological_process	GO:0010218	response to far red light
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010114	response to red light
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009642	response to light intensity
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G04730.1	CSPI06G04730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	G3DSA:1.10.3460.10		coord: 138..171 score: 1.
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 128..171 score: 1.
None	No IPR available	PANTHER	PTHR33401	FAMILY NOT NAMED	coord: 96..182 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G04730	Csa6G055400	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G04730	MELO3C008327	Melon (DHL92) v3.5.1	cpimeB469
CSPI06G04730	Lsi08G005690	Bottle gourd (USVL1VR-Ls)	cpilsiB487
CSPI06G04730	MELO3C029825.2	Melon (DHL92) v3.6.1	cpimedB460
CSPI06G04730	CsaV3_6G005050	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G04730	Bhi04G001350	Wax gourd	cpiwgoB579
CSPI06G04730	Cucsa.363880	Cucumber (Gy14) v1	cgycpiB540
CSPI06G04730	CmaCh15G005820	Cucurbita maxima (Rimu)	cmacpiB315
CSPI06G04730	CmaCh04G024570	Cucurbita maxima (Rimu)	cmacpiB778
CSPI06G04730	CmoCh04G025720	Cucurbita moschata (Rifu)	cmocpiB769
CSPI06G04730	CmoCh15G005890	Cucurbita moschata (Rifu)	cmocpiB306
CSPI06G04730	Cp4.1LG13g03820	Cucurbita pepo (Zucchini)	cpecpiB198
CSPI06G04730	Cp4.1LG01g21260	Cucurbita pepo (Zucchini)	cpecpiB460
CSPI06G04730	CsGy6G004670	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G04730	Carg01615	Silver-seed gourd	carcpiB0870
CSPI06G04730	Carg15800	Silver-seed gourd	carcpiB0070

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None