Cp4.1LG13g03820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g03820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionone-helix protein 2
LocationCp4.1LG13 : 6478460 .. 6480214 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAACAATCGCATGGTTGAAAATCGATGGATCAGCCATCATCTTTGTTTCTTCATTCTCTAAGCTCCTCAATGGCTTGTATTTTACTGAAACTTGGCGACATCTTATCCACACCAAACATATCCCTAATCCATTTCTTCCAAAAATCCACAAGCAATCAATCTTTGGCTTCAATTCCCCAATTCTGATTCCATTTCAGTTCCTCAACAATCTGAAACAGAAATTTCTGAGAGAACAGAAATGTCGGGGGCCTGTTCAATCCCCTTCGCCAAGATCAAAATCCCGGCCACTTCCTCCTCGCCGGCCACCGCTTCTCCGTCGGCGTCAGCCACCTCTTCCGCTTCTTCATCGTCGGCTCACAGTTCCATCAGATTCTCTTCCTCCAAGCCTTTCGTCTTCACCATTAGGAGTTCCCAGACTGAAGGCCCTCTTCGGAGACCGGCGGCTCCTTCTCTGAGAGAGCCATCGCCGCCGTCGCCACCTTCGCCGACGCCTCCTCTCAAGCCGACTCCTCCTCCATCGCAAACGCCTCCGTCGCCGGCGTATGCTGCGAAACTGGATAATGTGATCACATTGGAGTTCCAGAGACAGAAGGCTAAGGAGCTTCAGGAGTACTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAAAATGAAATTTCCAATGGAAGGTCGATTTAGTTTCCACTTTTTCTCCTCCGTTTCTCTCGTGATTACTAAATTTTGAAGTGATATAATCTCATTTGTTCTTGCTGGCTGTTATGATATTCTTTTGCAATTTAATTAACAATAGATCCTGCCAACAATTGACTGCGATTTGACTCATTCTCTTGTTGATATTTGGATTGGCTCCTCTTTCAATTTTCTTCGAGGGATACAATCCCTAAGGATCTCTTGGTAACCTTATGATTTGCTGCAAGTTTTGATTATGTTCAACTGCCTGAACTCCATTTCTTTACTTGATCTTTATGGATAACCAATCCATTTCCAATACAGATTCGTTTGCAACACTTCCTCTGTTTGAGAAATCATATCCACTGTGTTTTGTGCTGATTTTATTCAGATTTCAAGCGTTTTCCAATTCAGTGTATTGATTTTGTTCGTACTTATATGGGAATGGCGTTTATTTGATTTTGATGTTTCTCCTGAAGATTTGCATCGGATTGAGATAAACTGGTCCTTTTTGGTACCTTCGTTCCATAATTTACTGAAACTCATAGCTTCTAGTAGAAATCAGCTGTTCAATTTACTGGTTATGGGTGGATCATCACTACTCTTACTGGGTTGATTTGCACTAAACAGGTGGGCGATGTTTGGGTTTGCCGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAGTAGACCTCGAATGACACCATATACAAGGTCCATGTTGCTATATTTTTCCAATTGCTATAGTTTATATATCTACTTCTTGTAATTCATCTTATAGTCTTCATGAATTGATACTCTTAATGGCCATATAAGTGTGTGCTCCTTGCCAATACTCACTGTTCTTCTCTGTTATATATAAAGTCTTCCGTGAGTCTGTGCAATTCACTGGGGATCTGTACCTTCATTCATTGAAGGTTACTTACATTTGCTTCCTGTTGCATCATTGTTCAACTAGGGAT

mRNA sequence

GAGGTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAACAATCGCATGGTTGAAAATCGATGGATCAGCCATCATCTTTGTTTCTTCATTCTCTAAGCTCCTCAATGGCTTGTATTTTACTGAAACTTGGCGACATCTTATCCACACCAAACATATCCCTAATCCATTTCTTCCAAAAATCCACAAGCAATCAATCTTTGGCTTCAATTCCCCAATTCTGATTCCATTTCAGTTCCTCAACAATCTGAAACAGAAATTTCTGAGAGAACAGAAATGTCGGGGGCCTGTTCAATCCCCTTCGCCAAGATCAAAATCCCGGCCACTTCCTCCTCGCCGGCCACCGCTTCTCCGTCGGCGTCAGCCACCTCTTCCGCTTCTTCATCGTCGGCTCACAGTTCCATCAGATTCTCTTCCTCCAAGCCTTTCGTCTTCACCATTAGGAGTTCCCAGACTGAAGGCCCTCTTCGGAGACCGGCGGCTCCTTCTCTGAGAGAGCCATCGCCGCCGTCGCCACCTTCGCCGACGCCTCCTCTCAAGCCGACTCCTCCTCCATCGCAAACGCCTCCGTCGCCGGCGTATGCTGCGAAACTGGATAATGTGATCACATTGGAGTTCCAGAGACAGAAGGCTAAGGAGCTTCAGGAGTACTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAAAATGAAATTTCCAATGGAAGGTGGGCGATGTTTGGGTTTGCCGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAGTAGACCTCGAATGACACCATATACAAGGTCCATGTTGCTATATTTTTCCAATTGCTATAGTTTATATATCTACTTCTTGTAATTCATCTTATAGTCTTCATGAATTGATACTCTTAATGGCCATATAAGTGTGTGCTCCTTGCCAATACTCACTGTTCTTCTCTGTTATATATAAAGTCTTCCGTGAGTCTGTGCAATTCACTGGGGATCTGTACCTTCATTCATTGAAGGTTACTTACATTTGCTTCCTGTTGCATCATTGTTCAACTAGGGAT

Coding sequence (CDS)

ATGTCGGGGGCCTGTTCAATCCCCTTCGCCAAGATCAAAATCCCGGCCACTTCCTCCTCGCCGGCCACCGCTTCTCCGTCGGCGTCAGCCACCTCTTCCGCTTCTTCATCGTCGGCTCACAGTTCCATCAGATTCTCTTCCTCCAAGCCTTTCGTCTTCACCATTAGGAGTTCCCAGACTGAAGGCCCTCTTCGGAGACCGGCGGCTCCTTCTCTGAGAGAGCCATCGCCGCCGTCGCCACCTTCGCCGACGCCTCCTCTCAAGCCGACTCCTCCTCCATCGCAAACGCCTCCGTCGCCGGCGTATGCTGCGAAACTGGATAATGTGATCACATTGGAGTTCCAGAGACAGAAGGCTAAGGAGCTTCAGGAGTACTTTAAGCAGAAGAAGCTTGATGAGGCTGATCAGGGACCGTTCTTTGGCTTCATCGGGAAAAATGAAATTTCCAATGGAAGGTGGGCGATGTTTGGGTTTGCCGTTGGATTGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAGTAGACCTCGAATGA

Protein sequence

MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLE
Homology
[Close]
BLAST of Cp4.1LG13g03820 vs. TrEMBL
Match: A0A0A0KBA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055400 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.3e-70
Identity = 159/190 (83.68%), Postives = 171/190 (90.00%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSS-SAHSSIRFSSSKPFVFTIRSSQ 60
           MSGACS PF  IKIP+TSSSPA  S +AS+++S SSS S+ SS+RFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQKA 120
           TEGPLRRP+APSLR+PSPPSPPS TPPLKPTPPP Q+PPS       DNVITLEFQR KA
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPP-QSPPS-------DNVITLEFQRLKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIVDLE 190
           LSNFGI+DLE
Sbjct: 181 LSNFGIIDLE 182

[Close]
BLAST of Cp4.1LG13g03820 vs. TrEMBL
Match: B9H7V8_POPTR (ONE-HELIX protein 2 OS=Populus trichocarpa GN=POPTR_0005s21790g PE=4 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-54
Identity = 136/197 (69.04%), Postives = 160/197 (81.22%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSS-KPFVFTIRSSQ 60
           MS A SIP+  IKIP  SSS +++S  +S +SS+S+SS  S  RFS++ KP++ TIRSSQ
Sbjct: 1   MSVASSIPY--IKIPNPSSSSSSSSSCSSLSSSSSTSSTSSYYRFSTTTKPYIVTIRSSQ 60

Query: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQT-----PPSPAYAAKLD--NVITL 120
            EGP+RRP AP LREPSPP+  SP+PPLKP PP S +     PP PA    ++  NV+TL
Sbjct: 61  AEGPVRRPVAPPLREPSPPA--SPSPPLKPVPPSSPSSPVAPPPKPAAKVAVEDKNVMTL 120

Query: 121 EFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNF 180
           EFQRQKAKELQEYFKQKKL+EADQGPFFGF GKNEI+NGRWAMFGFAVG+LTEYATGS+F
Sbjct: 121 EFQRQKAKELQEYFKQKKLEEADQGPFFGFFGKNEIANGRWAMFGFAVGMLTEYATGSDF 180

Query: 181 VDQVKILLSNFGIVDLE 190
           VDQVKILLSNFGI+DLE
Sbjct: 181 VDQVKILLSNFGIIDLE 193

[Close]
BLAST of Cp4.1LG13g03820 vs. TrEMBL
Match: A0A067KWB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08332 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-53
Identity = 136/194 (70.10%), Postives = 153/194 (78.87%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSSKPF-VFTIRSSQ 60
           MS A S P+ KI  P++S S    SPS    SS+SS+S  S  +FSS+  F   TIRSSQ
Sbjct: 1   MSLASSFPYIKIPNPSSSCS----SPS----SSSSSTSTSSCFKFSSTTKFCALTIRSSQ 60

Query: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLD----NVITLEFQ 120
            EGP+RRP AP LREPSPPSPPSP  PLKP PP S  PP P  AAK+     NVITLEFQ
Sbjct: 61  AEGPIRRPVAPPLREPSPPSPPSP--PLKPVPP-STVPPPPKPAAKVGLDDKNVITLEFQ 120

Query: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           RQKAKELQEYFKQKKL+E+D+GPFFGF+GKNEI+NGRWAMFGFAVG+LTEYATGS+FVDQ
Sbjct: 121 RQKAKELQEYFKQKKLEESDRGPFFGFVGKNEITNGRWAMFGFAVGMLTEYATGSDFVDQ 180

Query: 181 VKILLSNFGIVDLE 190
           VKILLSNFGI+DLE
Sbjct: 181 VKILLSNFGIIDLE 183

[Close]
BLAST of Cp4.1LG13g03820 vs. TrEMBL
Match: I1MP35_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G163800 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.0e-51
Identity = 135/196 (68.88%), Postives = 146/196 (74.49%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSSKPFVFTIRSSQT 60
           MS ACSIP   IKIP  SSSP          S  SSS++  S+RFSSSKP   TIR+SQ 
Sbjct: 1   MSMACSIPC--IKIPTCSSSP----------SCTSSSTSSYSLRFSSSKPHSVTIRNSQA 60

Query: 61  EGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKL-------DNVITLE 120
           EGP+RRP AP +REPS  S  S  P L+    PSQ PPSP+   K         NVITLE
Sbjct: 61  EGPIRRPVAPPIREPSSSSSSSSAPQLQKPTLPSQPPPSPSPPQKPATVVGDDKNVITLE 120

Query: 121 FQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV 180
           FQRQKAKELQEYFKQKKL++ADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FV
Sbjct: 121 FQRQKAKELQEYFKQKKLEQADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFV 180

Query: 181 DQVKILLSNFGIVDLE 190
           DQVKILLSNFGIVDLE
Sbjct: 181 DQVKILLSNFGIVDLE 184

[Close]
BLAST of Cp4.1LG13g03820 vs. TrEMBL
Match: A0A0B2SAJ2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_030142 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.5e-51
Identity = 136/194 (70.10%), Postives = 147/194 (75.77%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSSKPFVFTIRSSQT 60
           MS ACSIP   IKIP  SSSP          S  SSS++  S+RFSSSKP   TIR+SQ 
Sbjct: 1   MSMACSIPC--IKIPTCSSSP----------SCTSSSTSSYSLRFSSSKPHSVTIRNSQA 60

Query: 61  EGPLRRPAAPSLREPSPPSPPSP---TPPLKPTPPPSQTPP-SPAYAAKLD-NVITLEFQ 120
           EGP+RRP AP +REPS  S  +P    P L   PPPS +PP  PA     D NVITLEFQ
Sbjct: 61  EGPIRRPVAPPIREPSSSSSSAPQLQKPTLPSQPPPSPSPPQKPATVVGDDKNVITLEFQ 120

Query: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           RQKAKELQEYFKQKKL++ADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS+FVDQ
Sbjct: 121 RQKAKELQEYFKQKKLEQADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSDFVDQ 180

Query: 181 VKILLSNFGIVDLE 190
           VKILLSNFGIVDLE
Sbjct: 181 VKILLSNFGIVDLE 182

[Close]
BLAST of Cp4.1LG13g03820 vs. TAIR10
Match: AT1G34000.1 (AT1G34000.1 one-helix protein 2)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-45
Identity = 117/173 (67.63%), Postives = 133/173 (76.88%), Query Frame = 1 

Query: 19  SSPATASPSASATSSASSSSAHSSIRFSSS-KPFVFTIRSSQTEGPLRRPAAP-SLREPS 78
           +SP       + +SS+SSS+A SS RFS++ KP VF IR SQTEGPLRRP+AP +LREP 
Sbjct: 4   ASPIQCIRILNPSSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQ 63

Query: 79  PPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQKAKELQEYFKQKKLDEADQ 138
            P PPS       +PPPS  PP  A A    +V T+EFQRQKAKELQEYFKQKKL+ A Q
Sbjct: 64  KPVPPSQP---SSSPPPSP-PPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQ 123

Query: 139 GPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLE 190
           GPFFGF  KNEISNGRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 124 GPFFGFQPKNEISNGRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

[Close]
BLAST of Cp4.1LG13g03820 vs. NCBI nr
Match: gi|659081745|ref|XP_008441491.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 8.5e-75
Identity = 169/194 (87.11%), Postives = 179/194 (92.27%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPAT----ASPSASATSSASSSSA-HSSIRFSSSKPFVFTI 60
           MSGACSIPFA IKIP+TSSSPA     ASPSASA+SSASSSS+ HSS+RF SSKPF+FTI
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASASSSASSSSSLHSSLRFHSSKPFLFTI 60

Query: 61  RSSQTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQ 120
           RSSQTEGPLRRP+APSLR+PSPPSPPSPTPPLKP+PP SQ+PPSP    K DNVITLEFQ
Sbjct: 61  RSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPP-SQSPPSPVL--KQDNVITLEFQ 120

Query: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180
           R KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ
Sbjct: 121 RLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 190
           VKILLSNFGI+DLE
Sbjct: 181 VKILLSNFGIIDLE 191

[Close]
BLAST of Cp4.1LG13g03820 vs. NCBI nr
Match: gi|449446399|ref|XP_004140959.1| (PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 4.8e-70
Identity = 159/190 (83.68%), Postives = 171/190 (90.00%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSS-SAHSSIRFSSSKPFVFTIRSSQ 60
           MSGACS PF  IKIP+TSSSPA  S +AS+++S SSS S+ SS+RFSSSKPF+FTIRSSQ
Sbjct: 1   MSGACSFPFPSIKIPSTSSSPAATSAAASSSASTSSSASSSSSLRFSSSKPFLFTIRSSQ 60

Query: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQKA 120
           TEGPLRRP+APSLR+PSPPSPPS TPPLKPTPPP Q+PPS       DNVITLEFQR KA
Sbjct: 61  TEGPLRRPSAPSLRDPSPPSPPSLTPPLKPTPPP-QSPPS-------DNVITLEFQRLKA 120

Query: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180
           KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL
Sbjct: 121 KELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKIL 180

Query: 181 LSNFGIVDLE 190
           LSNFGI+DLE
Sbjct: 181 LSNFGIIDLE 182

[Close]
BLAST of Cp4.1LG13g03820 vs. NCBI nr
Match: gi|566172587|ref|XP_002307511.2| (ONE-HELIX protein 2 [Populus trichocarpa])

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54
Identity = 136/197 (69.04%), Postives = 160/197 (81.22%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSS-KPFVFTIRSSQ 60
           MS A SIP+  IKIP  SSS +++S  +S +SS+S+SS  S  RFS++ KP++ TIRSSQ
Sbjct: 1   MSVASSIPY--IKIPNPSSSSSSSSSCSSLSSSSSTSSTSSYYRFSTTTKPYIVTIRSSQ 60

Query: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQT-----PPSPAYAAKLD--NVITL 120
            EGP+RRP AP LREPSPP+  SP+PPLKP PP S +     PP PA    ++  NV+TL
Sbjct: 61  AEGPVRRPVAPPLREPSPPA--SPSPPLKPVPPSSPSSPVAPPPKPAAKVAVEDKNVMTL 120

Query: 121 EFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNF 180
           EFQRQKAKELQEYFKQKKL+EADQGPFFGF GKNEI+NGRWAMFGFAVG+LTEYATGS+F
Sbjct: 121 EFQRQKAKELQEYFKQKKLEEADQGPFFGFFGKNEIANGRWAMFGFAVGMLTEYATGSDF 180

Query: 181 VDQVKILLSNFGIVDLE 190
           VDQVKILLSNFGI+DLE
Sbjct: 181 VDQVKILLSNFGIIDLE 193

[Close]
BLAST of Cp4.1LG13g03820 vs. NCBI nr
Match: gi|743901884|ref|XP_011044269.1| (PREDICTED: PH domain-containing protein DDB_G0287875 [Populus euphratica])

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-54
Identity = 135/197 (68.53%), Postives = 157/197 (79.70%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSS-KPFVFTIRSSQ 60
           MS A SIP+ KI  P++SSS    S  +S +SS+S+SS  S  RFS++ KP++ TIRSSQ
Sbjct: 1   MSVASSIPYIKIPNPSSSSS----SSCSSLSSSSSTSSTSSYYRFSTTTKPYIVTIRSSQ 60

Query: 61  TEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPP-----PSQTPPSPAYAAKLD--NVITL 120
            EGP+RRP AP LREPSPP+  SP+PPLKP PP     P   PP PA    ++  NV+TL
Sbjct: 61  AEGPVRRPVAPPLREPSPPA--SPSPPLKPVPPSSLSSPVAPPPKPAAKVAVEDKNVMTL 120

Query: 121 EFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNF 180
           EFQRQKAKELQEYFKQKKL+EADQGPFFGF GKNEI+NGRWAMFGFAVG+LTEYATGS+F
Sbjct: 121 EFQRQKAKELQEYFKQKKLEEADQGPFFGFFGKNEIANGRWAMFGFAVGMLTEYATGSDF 180

Query: 181 VDQVKILLSNFGIVDLE 190
           VDQVKILLSNFGI+DLE
Sbjct: 181 VDQVKILLSNFGIIDLE 191

[Close]
BLAST of Cp4.1LG13g03820 vs. NCBI nr
Match: gi|1009138300|ref|XP_015886512.1| (PREDICTED: probable inactive serine/threonine-protein kinase slob2 [Ziziphus jujuba])

HSP 1 Score: 217.2 bits (552), Expect = 2.4e-53
Identity = 138/199 (69.35%), Postives = 157/199 (78.89%), Query Frame = 1 

Query: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSSKPFVFTIRSSQT 60
           MS A S PF  IKIP +SS+P   S S S++S+ SS+S H S  FSS+K  + TIRSSQT
Sbjct: 1   MSVASSFPF--IKIPTSSSAP---SCSYSSSSTTSSTSHHPSSWFSSTKLSIKTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPS----PAYAAKL------DNVI 120
           EGP+RRP APS+REPSPP P  PTPP +P P  S +PPS    PA  + L      + VI
Sbjct: 61  EGPIRRPVAPSVREPSPPPPLKPTPPSQPPPSSSSSPPSLPPKPAPVSGLVSVDDKNAVI 120

Query: 121 TLEFQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGS 180
           TLEFQRQKAKELQ+YFKQKKLD+ADQGPFFGF+GKNEISNGRWAMFGFAVG+LTEYATGS
Sbjct: 121 TLEFQRQKAKELQDYFKQKKLDDADQGPFFGFVGKNEISNGRWAMFGFAVGMLTEYATGS 180

Query: 181 NFVDQVKILLSNFGIVDLE 190
           +FVDQVKILLSNFGIVDLE
Sbjct: 181 DFVDQVKILLSNFGIVDLE 194

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g03820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG13g03820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBA0_CUCSA3.3e-7083.68Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055400 PE=4 SV=1[more]
B9H7V8_POPTR1.2e-5469.04ONE-HELIX protein 2 OS=Populus trichocarpa GN=POPTR_0005s21790g PE=4 SV=2[more]
A0A067KWB8_JATCU3.7e-5370.10Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08332 PE=4 SV=1[more]
I1MP35_SOYBN2.0e-5168.88Uncharacterized protein OS=Glycine max GN=GLYMA_16G163800 PE=4 SV=1[more]
A0A0B2SAJ2_GLYSO4.5e-5170.10Uncharacterized protein OS=Glycine soja GN=glysoja_030142 PE=4 SV=1[more]
BLAST of Cp4.1LG13g03820 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G34000.12.0e-4567.63 one-helix protein 2[more]
BLAST of Cp4.1LG13g03820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081745|ref|XP_008441491.1|8.5e-7587.11PREDICTED: putative protein TPRXL [Cucumis melo][more]
gi|449446399|ref|XP_004140959.1|4.8e-7083.68PREDICTED: proline-rich receptor-like protein kinase PERK14 [Cucumis sativus][more]
gi|566172587|ref|XP_002307511.2|1.7e-5469.04ONE-HELIX protein 2 [Populus trichocarpa][more]
gi|743901884|ref|XP_011044269.1|6.3e-5468.53PREDICTED: PH domain-containing protein DDB_G0287875 [Populus euphratica][more]
gi|1009138300|ref|XP_015886512.1|2.4e-5369.35PREDICTED: probable inactive serine/threonine-protein kinase slob2 [Ziziphus juj... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009637 response to blue light
biological_process GO:0010218 response to far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0009744 response to sucrose
biological_process GO:0016310 phosphorylation
biological_process GO:0009642 response to light intensity
biological_process GO:0055085 transmembrane transport
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g03820.1Cp4.1LG13g03820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 135..178
score: 1.8
NoneNo IPR availableGENE3DG3DSA:1.20.1620.10coord: 143..176
score: 1.
NoneNo IPR availablePANTHERPTHR33401FAMILY NOT NAMEDcoord: 107..189
score: 5.2