CsGy5G029640 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G029640
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	RmlC-like cupins superfamily protein
Location	Chr5 : 32960724 .. 32962938 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCCCAACTTACAAGATAAGGTACGAGTAGATGAACCAATTCCAAGTGGCAGTCCATTAGAGTTATGAACATGAGGTTGATAATTGATATGGCCGTTGGTTTTCCTCTAGGAGAACCCCAAAAAGTAAGGGAAATCAAAAGGTGGGATCTTGGGAATTGGGATGGCTTCTGCTGTGGACGGCTTCTTATTACTAAATTTAAAGCCACAATCTCTCCTCACCAAACCTACAAACGTTTCTTTGTACTTTGGGAAAAGGGCACCGTCTCTTCAAATTCGAGCAGATTCCATGGCTACTGAGAGGCTGGGGATCAAAGTTGAGAAGAATCCATCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCTAAGTATTTTGATTTCTCTATCTTGTTTCTTGCTTCTTCTTTTTTTCTCTCTATTTAATTGTTGAATGCCTTTGTTTCTGCCCCCAATTTGTTGCTAGTGGTTGATATTAATGGCCCATGTAGTTTTTCTTTTTAATCATTGAGCCTTGGTATGAACGATGTTAGCGATTTTGGAGTTGGGTTTCGATCTGTTTGAAGAGTTAATGAATGTTGATAAATAGATGGATGATGATATGCTGAAGGAGTTGTTGTTTTGATCTATGACCACTTCCAGCTTCTGGGTTGTAAGTTGTGCATATGTTCATTTCTCGTTCGGCTCTTAGATGGGTAGCTACGAACTAAGAACCACTGTGCGTTGGTTTAGTGGTCAAGAAGAGCCATTTTAAATAATGAACAGCATAGAGCTGATGGATTCAAAGCTGGGTTACTAGATACCATTTGGGGTTTGTTTGGTTTAAATTTTGAAGGGTTTAATTTTGAAAATGAGTTATTTTGGAAATAAGGTAAAACGGCTGGAAACTGTTTTTGAAACACTTTCAAAGTTCATTAGTCAATTGGAATAGACCCTTAATGTATGATGAGTTTTCTTGACAACCATTTATAGTAAGGTTGCACAAACTAGCATTGGCAGTCACAAATATCAGAATCAATGGATTTAGAAAAAGGTTCTAACCCCAAGTTTATAGTTTTTGTTTGAGTAGGAATTAGTAAATATGCTAACAAAGTAGGTTTACTTAGTTGTAGGTTATAAGTTGTTGTACACACCACTCTTATAGTTGGTGTCCAAACATGGAGTGGATTATAATAACCAGTCTCTAACTTTAGAAAGAATATATATCAAAGGGTATATTGTTAGAAAATGGATTAATTACCAAATTCATAAGTGATACCTTCTAGACCTGTGATTTTTGTTTGCATATTAAAATATATGAATAGTATTTTAAATTATGTAACAGAAACTTGAAAACCTGAGATGGAGAGGTACTTAGGTTTCTCATAGAAGCATACATGAATGAATATTTGGTTGGTTTTGTTGTGAAATTTTGAGTGAAAATTGAATGTCAAACTGAAACTGGGAAATCCAATAGGTGGGGTTGTGGACCAAGCAAATTCCCATGGACATATTCAGACAAAGAGACATGCTATCTGCTAGAAGGAAAGGTAAAAGTTACTCCTGCTGGATCAAATGAATCTGTTGAGATTGGCGCTGGGGATTTGGTTGTGTTTCCAAAAGGAATGAGCTGCACTTGGGATGTCTCTGTTGCTGTGGATAAGCACTATAAGTTTGAATAGAACTTGTGGTGTGTATGAACTAATGCCTTTTTGAATGTTGATGAACTCTTCTTCCATGACTGCTTTTCTTGTTGAACCAGATTTCTAGGTTCTATTATTGAATTGCTTCTGGAACAAACTGAGCTAATATGATGAATCTAATATCACGTTTGAGATTGCTGGTTGTTGAGATTTTAATGCTCTAATTAGAATCTAAGTTTTCTCTTGAATGTTATGAAACTCTATGATTTGAATCAGTAACGTTTTGCTTATAAACAAGAAGATTCAAATAACACTCAAATCTTAAAAAGTTCCAAAACCAATTCGAAATTAATCATTGTGAAGTGAAAAATTGAATTGCCTTGATCAAATATCTCGAAGAATGGAACATTGCTCCGAAACATCCACAAGCAAGATTGATCATTGCTTTGATTTCTCAAATATCTTGAAGAATGGAACATCATTGCTCCGAAACATTCACGAGCAAGATTGATCATTGCTTTGAATTCTTCTTTCGTCTTAGCTTTCTTCTTTGAAGTTTTTTTTTTTTTTTTGATCTTATTATATATTT

mRNA sequence

AAATCCCAACTTACAAGATAAGGTACGAGTAGATGAACCAATTCCAAGTGGCAGTCCATTAGAGTTATGAACATGAGGTTGATAATTGATATGGCCGTTGGTTTTCCTCTAGGAGAACCCCAAAAAGTAAGGGAAATCAAAAGGTGGGATCTTGGGAATTGGGATGGCTTCTGCTGTGGACGGCTTCTTATTACTAAATTTAAAGCCACAATCTCTCCTCACCAAACCTACAAACGTTTCTTTGTACTTTGGGAAAAGGGCACCGTCTCTTCAAATTCGAGCAGATTCCATGGCTACTGAGAGGCTGGGGATCAAAGTTGAGAAGAATCCATCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCTAAGTGGGGTTGTGGACCAAGCAAATTCCCATGGACATATTCAGACAAAGAGACATGCTATCTGCTAGAAGGAAAGGTAAAAGTTACTCCTGCTGGATCAAATGAATCTGTTGAGATTGGCGCTGGGGATTTGGTTGTGTTTCCAAAAGGAATGAGCTGCACTTGGGATGTCTCTGTTGCTGTGGATAAGCACTATAAGTTTGAATAGAACTTGTGGTGTGTATGAACTAATGCCTTTTTGAATGTTGATGAACTCTTCTTCCATGACTGCTTTTCTTGTTGAACCAGATTTCTAGGTTCTATTATTGAATTGCTTCTGGAACAAACTGAGCTAATATGATGAATCTAATATCACGTTTGAGATTGCTGGTTGTTGAGATTTTAATGCTCTAATTAGAATCTAAGTTTTCTCTTGAATGTTATGAAACTCTATGATTTGAATCAGTAACGTTTTGCTTATAAACAAGAAGATTCAAATAACACTCAAATCTTAAAAAGTTCCAAAACCAATTCGAAATTAATCATTGTGAAGTGAAAAATTGAATTGCCTTGATCAAATATCTCGAAGAATGGAACATTGCTCCGAAACATCCACAAGCAAGATTGATCATTGCTTTGATTTCTCAAATATCTTGAAGAATGGAACATCATTGCTCCGAAACATTCACGAGCAAGATTGATCATTGCTTTGAATTCTTCTTTCGTCTTAGCTTTCTTCTTTGAAGTTTTTTTTTTTTTTTTGATCTTATTATATATTT

Coding sequence (CDS)

ATGGCTTCTGCTGTGGACGGCTTCTTATTACTAAATTTAAAGCCACAATCTCTCCTCACCAAACCTACAAACGTTTCTTTGTACTTTGGGAAAAGGGCACCGTCTCTTCAAATTCGAGCAGATTCCATGGCTACTGAGAGGCTGGGGATCAAAGTTGAGAAGAATCCATCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCTAAGTGGGGTTGTGGACCAAGCAAATTCCCATGGACATATTCAGACAAAGAGACATGCTATCTGCTAGAAGGAAAGGTAAAAGTTACTCCTGCTGGATCAAATGAATCTGTTGAGATTGGCGCTGGGGATTTGGTTGTGTTTCCAAAAGGAATGAGCTGCACTTGGGATGTCTCTGTTGCTGTGGATAAGCACTATAAGTTTGAATAG

Protein sequence

MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKFE

Homology

[Close]

BLAST of CsGy5G029640 vs. NCBI nr
Match: XP_004141517.1 (PREDICTED: uncharacterized protein LOC101218376 [Cucumis sativus] >KGN52597.1 hypothetical protein Csa_5G646710 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 2.0e-74
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60
           MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK
Sbjct: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120
           LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG
Sbjct: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120

Query: 121 MSCTWDVSVAVDKHYKFE 139
           MSCTWDVSVAVDKHYKFE
Sbjct: 121 MSCTWDVSVAVDKHYKFE 138

[Close]

BLAST of CsGy5G029640 vs. NCBI nr
Match: XP_008459495.1 (PREDICTED: uncharacterized protein LOC103498612 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 4.0e-70
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60
           MASAVDGFL LNLKP+SLLTKPTNVSLYFGKRA SLQIRADSMATERLGIKVEKNPSESK
Sbjct: 1   MASAVDGFLCLNLKPRSLLTKPTNVSLYFGKRAQSLQIRADSMATERLGIKVEKNPSESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120
           L+ELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGS+ESVEIGAGDLVVFPKG
Sbjct: 61  LSELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDESVEIGAGDLVVFPKG 120

Query: 121 MSCTWDVSVAVDKHYKF 138
           MSCTWDVSVAVDKHY F
Sbjct: 121 MSCTWDVSVAVDKHYNF 137

[Close]

BLAST of CsGy5G029640 vs. NCBI nr
Match: XP_023534884.1 (uncharacterized protein LOC111796480 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023534885.1 uncharacterized protein LOC111796480 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.5 bits (654), Expect = 5.1e-65
Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60
           MASAV+GF LLNLKP + L+KP N+SL F KRAPSLQIRADSMATERLGIKVEKNP ESK
Sbjct: 1   MASAVNGFSLLNLKPPTSLSKPRNLSLNFAKRAPSLQIRADSMATERLGIKVEKNPPESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120
           LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGS+E VEIGAGDLVVFP G
Sbjct: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEIGAGDLVVFPAG 120

Query: 121 MSCTWDVSVAVDKHYKF 138
           MSCTWDVS+AVDKHYKF
Sbjct: 121 MSCTWDVSIAVDKHYKF 137

[Close]

BLAST of CsGy5G029640 vs. NCBI nr
Match: XP_022974049.1 (uncharacterized protein LOC111472678 [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 6.6e-65
Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60
           MASAV+GF LLNLKP + L+KP NVSL F KRAPSLQIRADSMATERLGIKVEKNP ESK
Sbjct: 1   MASAVNGFSLLNLKPPTSLSKPRNVSLNFVKRAPSLQIRADSMATERLGIKVEKNPPESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120
           LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGS+E VE+GAGDLVVFP G
Sbjct: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAG 120

Query: 121 MSCTWDVSVAVDKHYKF 138
           MSCTWDVS+AVDKHYKF
Sbjct: 121 MSCTWDVSIAVDKHYKF 137

[Close]

BLAST of CsGy5G029640 vs. NCBI nr
Match: XP_022930131.1 (uncharacterized protein LOC111436648 [Cucurbita moschata])

HSP 1 Score: 253.1 bits (645), Expect = 5.6e-64
Identity = 120/137 (87.59%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60
           MASA++GF LLNLKP + L+KP N+SL F K APSLQIRADSMATERLGIKVEKNP ESK
Sbjct: 1   MASAMNGFSLLNLKPPTSLSKPRNLSLNFAKTAPSLQIRADSMATERLGIKVEKNPPESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120
           LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGS+E VEIGAGDLVVFP G
Sbjct: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEIGAGDLVVFPAG 120

Query: 121 MSCTWDVSVAVDKHYKF 138
           MSCTWDVS+AVDKHYKF
Sbjct: 121 MSCTWDVSIAVDKHYKF 137

[Close]

BLAST of CsGy5G029640 vs. TAIR10
Match: AT4G10300.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 3.2e-45
Identity = 84/120 (70.00%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 19  LTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSK 78
           LT+ +N   Y  +R  S+     + +TE+LGI +EKNP ESKLT+LGVR WPKWGC PSK
Sbjct: 16  LTRRSN-KPYNSRRPSSMAAAIRAESTEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSK 75

Query: 79  FPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKFE 138
           FPWTYS KETCYLL+GKVKV P GS+E VEI AGD VVFPKGMSCTWDVSVAVDKHY+FE
Sbjct: 76  FPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134

[Close]

BLAST of CsGy5G029640 vs. TAIR10
Match: AT3G04300.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 2.0e-31
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 48  LGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESV 107
           + I +E NPS  +L++LGV  WPKW C P K+   + ++ETCYL++GKVKV P GS+E V
Sbjct: 1   MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFV 60

Query: 108 EIGAGDLVVFPKGMSCTWDVSVAVDKHYKFE 139
           E GAGDLV  PKG+SCTWDVS+ +DKHYKF+
Sbjct: 61  EFGAGDLVTIPKGLSCTWDVSLFIDKHYKFD 91

[Close]

BLAST of CsGy5G029640 vs. TAIR10
Match: AT4G28703.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 6.7e-27
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0


Query: 43  MATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKV---- 102
           MA +   I VE+NPS+++L EL  + WPKWGC P K+   Y  +E CY+L GKVKV    
Sbjct: 1   MADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKP 60

Query: 103 TPAGSNES-----VEIGAGDLVVFPKGMSCTWDVSVAVDKHYKF 138
            P+ S+++     VE GAGD+V FPKG+SCTWDVS++VDKHY F
Sbjct: 61  PPSSSSDAEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104

[Close]

BLAST of CsGy5G029640 vs. TAIR10
Match: AT4G10280.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.4e-23
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 8   FLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADS-MATERLGIKVEKNPSESKLTELGV 67
           FL L+L   ++    + ++     +   + + +DS + TE  G+K+ +  S++KL +LGV
Sbjct: 5   FLTLSLLLVTVCVCVSFITTKLNPKEAIVSVSSDSEIPTEIHGVKILRQASDTKLAQLGV 64

Query: 68  RQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAG---SNESVEIGAGDLVVFPKGMSC 127
             WPKW   PSKFPW +   ET Y +EGKVKV   G     E+ EIG GD+VVFPK M  
Sbjct: 65  ASWPKWEGAPSKFPWEFKKTETIYFMEGKVKVNVDGYDEEEETFEIGKGDVVVFPKDMKV 124

Query: 128 TWDVSVAVDKHYKFE 139
            W+++ AV K Y  E
Sbjct: 125 VWEITEAVKKQYSLE 139

[Close]

BLAST of CsGy5G029640 vs. TAIR10
Match: AT4G10290.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16
Identity = 45/101 (44.55%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 38  IRADSMATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVK 97
           I A  + TE  G+KV +  S++KL ELGV  W  W   P KFPW +   ET Y +EGK+K
Sbjct: 8   IFAPEVPTEIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLK 67

Query: 98  VTPAG---SNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHY 136
           V         E++E  AGDLVVFP+ M+   DV   V K Y
Sbjct: 68  VKVEDHHKEGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108

[Close]

BLAST of CsGy5G029640 vs. TrEMBL
Match: tr|A0A0A0KVZ0|A0A0A0KVZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646710 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60
           MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK
Sbjct: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120
           LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG
Sbjct: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120

Query: 121 MSCTWDVSVAVDKHYKFE 139
           MSCTWDVSVAVDKHYKFE
Sbjct: 121 MSCTWDVSVAVDKHYKFE 138

[Close]

BLAST of CsGy5G029640 vs. TrEMBL
Match: tr|A0A1S3C9T6|A0A1S3C9T6_CUCME (uncharacterized protein LOC103498612 OS=Cucumis melo OX=3656 GN=LOC103498612 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.6e-70
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60
           MASAVDGFL LNLKP+SLLTKPTNVSLYFGKRA SLQIRADSMATERLGIKVEKNPSESK
Sbjct: 1   MASAVDGFLCLNLKPRSLLTKPTNVSLYFGKRAQSLQIRADSMATERLGIKVEKNPSESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120
           L+ELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGS+ESVEIGAGDLVVFPKG
Sbjct: 61  LSELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDESVEIGAGDLVVFPKG 120

Query: 121 MSCTWDVSVAVDKHYKF 138
           MSCTWDVSVAVDKHY F
Sbjct: 121 MSCTWDVSVAVDKHYNF 137

[Close]

BLAST of CsGy5G029640 vs. TrEMBL
Match: tr|A0A2H5QC91|A0A2H5QC91_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_216420 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.8e-47
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 8   FLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMAT---ERLGIKVEKNPSESKLTEL 67
           FLLL     S  +KP+N   +F  R   + +RA++M+T   E+LG+K+E+NP ESKLTEL
Sbjct: 9   FLLLKQPTFSPRSKPSN---HFSTRRRVVVVRAEAMSTTTIEKLGVKIERNPPESKLTEL 68

Query: 68  GVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKGMSCT 127
           GVRQWPKWGC PSKFPWTYSDKETCYLLEGKVKV P GSNE VEIGAGDLVVFPKGMSCT
Sbjct: 69  GVRQWPKWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVFPKGMSCT 128

Query: 128 WDVSVAVDKHYKF 138
           WDVSV VDKHYKF
Sbjct: 129 WDVSVGVDKHYKF 138

[Close]

BLAST of CsGy5G029640 vs. TrEMBL
Match: tr|A0A0B0P865|A0A0B0P865_GOSAR (Ethanolamine utilization eutQ OS=Gossypium arboreum OX=29729 GN=F383_00164 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.8e-46
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 36  LQIRADSMATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGK 95
           + IR++SMATE+LGIKVE NPSESKL++LGVRQWPKWGC PSKFPWTYS KETCYLLEGK
Sbjct: 35  INIRSESMATEKLGIKVETNPSESKLSQLGVRQWPKWGCPPSKFPWTYSSKETCYLLEGK 94

Query: 96  VKVTPAGSNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKFE 139
           VKV P GSN+ VEIGAGDLV FPKGMSCTW+VSVAVDKHYKFE
Sbjct: 95  VKVYPEGSNDFVEIGAGDLVEFPKGMSCTWEVSVAVDKHYKFE 137

[Close]

BLAST of CsGy5G029640 vs. TrEMBL
Match: tr|A0A1U8JPC3|A0A1U8JPC3_GOSHI (uncharacterized protein LOC107909172 OS=Gossypium hirsutum OX=3635 GN=LOC107909172 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.8e-46
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 36  LQIRADSMATERLGIKVEKNPSESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGK 95
           + IR++SMATE+LGIKVE NPSESKL++LGVRQWPKWGC PSKFPWTYS KETCYLLEGK
Sbjct: 35  INIRSESMATEKLGIKVETNPSESKLSQLGVRQWPKWGCPPSKFPWTYSSKETCYLLEGK 94

Query: 96  VKVTPAGSNESVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKFE 139
           VKV P GSN+ VEIGAGDLV FPKGMSCTW+VSVAVDKHYKFE
Sbjct: 95  VKVYPEGSNDFVEIGAGDLVEFPKGMSCTWEVSVAVDKHYKFE 137

The following BLAST results are available for this feature:

BLAST of CsGy5G029640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141517.1	2.0e-74	100.00	PREDICTED: uncharacterized protein LOC101218376 [Cucumis sativus] >KGN52597.1 hy...	[more]
XP_008459495.1	4.0e-70	95.62	PREDICTED: uncharacterized protein LOC103498612 [Cucumis melo]	[more]
XP_023534884.1	5.1e-65	89.05	uncharacterized protein LOC111796480 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022974049.1	6.6e-65	89.05	uncharacterized protein LOC111472678 [Cucurbita maxima]	[more]
XP_022930131.1	5.6e-64	87.59	uncharacterized protein LOC111436648 [Cucurbita moschata]	[more]

BLAST of CsGy5G029640 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10300.1	3.2e-45	70.00	RmlC-like cupins superfamily protein	[more]
AT3G04300.1	2.0e-31	59.34	RmlC-like cupins superfamily protein	[more]
AT4G28703.1	6.7e-27	52.88	RmlC-like cupins superfamily protein	[more]
AT4G10280.1	3.4e-23	40.00	RmlC-like cupins superfamily protein	[more]
AT4G10290.1	1.4e-16	44.55	RmlC-like cupins superfamily protein	[more]

BLAST of CsGy5G029640 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G029640 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVZ0\|A0A0A0KVZ0_CUCSA	1.4e-74	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646710 PE=4 SV=1	[more]
tr\|A0A1S3C9T6\|A0A1S3C9T6_CUCME	2.6e-70	95.62	uncharacterized protein LOC103498612 OS=Cucumis melo OX=3656 GN=LOC103498612 PE=...	[more]
tr\|A0A2H5QC91\|A0A2H5QC91_CITUN	1.8e-47	72.18	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_216420 PE=4 SV=1	[more]
tr\|A0A0B0P865\|A0A0B0P865_GOSAR	7.8e-46	84.47	Ethanolamine utilization eutQ OS=Gossypium arboreum OX=29729 GN=F383_00164 PE=4 ...	[more]
tr\|A0A1U8JPC3\|A0A1U8JPC3_GOSHI	7.8e-46	84.47	uncharacterized protein LOC107909172 OS=Gossypium hirsutum OX=3635 GN=LOC1079091...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll
IPR008579	DUF861_Cupin_3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G029640.1	CsGy5G029640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008579	Domain of unknown function DUF861, cupin-3	PFAM	PF05899	Cupin_3	coord: 62..135 e-value: 1.2E-31 score: 108.1
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 39..137 e-value: 1.1E-38 score: 132.9
None	No IPR available	PANTHER	PTHR33271	FAMILY NOT NAMED	coord: 1..138
None	No IPR available	PANTHER	PTHR33271:SF6	SUBFAMILY NOT NAMED	coord: 1..138
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	SSF51182	RmlC-like cupins	coord: 61..135

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G029640	Cla012370	Watermelon (97103) v1	cgybwmB351
CsGy5G029640	Csa5G646710	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G029640	MELO3C022114	Melon (DHL92) v3.5.1	cgybmeB299
CsGy5G029640	ClCG08G001910	Watermelon (Charleston Gray)	cgybwcgB379
CsGy5G029640	CSPI05G30250	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G029640	CmaCh09G012080	Cucurbita maxima (Rimu)	cgybcmaB580
CsGy5G029640	CmoCh09G011990	Cucurbita moschata (Rifu)	cgybcmoB552
CsGy5G029640	Lsi08G001900	Bottle gourd (USVL1VR-Ls)	cgyblsiB358
CsGy5G029640	Cp4.1LG06g09780	Cucurbita pepo (Zucchini)	cgybcpeB696
CsGy5G029640	MELO3C022114.2	Melon (DHL92) v3.6.1	cgybmedB299
CsGy5G029640	CsaV3_5G039360	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G029640	Cla97C08G145990	Watermelon (97103) v2	cgybwmbB385
CsGy5G029640	Bhi06G000111	Wax gourd	cgybwgoB439

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G029640	Cucurbita maxima (Rimu)	cgybcmaB633
CsGy5G029640	Cucurbita moschata (Rifu)	cgybcmoB611
CsGy5G029640	Cucurbita pepo (Zucchini)	cgybcpeB672