CmaCh09G012080 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G012080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RmlC-like cupins superfamily protein
Location	Cma_Chr09 : 7971442 .. 7974473 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTGATAATATAGCCCTAAAAATAGGGGAAATCAAATAGTGAGGATCTTGGGAGTTGCGATGGCTTCCGCAGTGAACGGATTCTCATTACTAAATTTAAAACCGCCCACTTCCCTCAGTAAACCCAGAAACGTCTCTTTGAACTTCGTGAAAAGGGCACCATCCCTTCAGATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAGTATTTTGATTTCTATATCTCTTTTCTTGATTGTTTTCTCCATTTAATTGCTGCAATATCATTGTTTCGGCCGCCTAATGTTTACTGGTTGTTGATGTTAATGGCCCCTGTGGCTGTTCTTTTGATAATCGAGCCTTGATATTAGCGATGTTAGCAATTTTGGAATTGGGTTTCAATCTGTTTTAAGGGTTTATGAATGTTTATAAATAGATGGATGATTGAATGCTTAAGGTGTTGTTATTTTGATATTTGATCGCTTCAAGCTTCTGGGTTGTAAGTTTGCATGTTGGCAATTTCTTGTTTGGTTGTTTGGTGGGGCGCTAAGATTAAGAACTAAGAACGGTTAGGAATCACGACCTCCGCAATGATATGATTTTGTCCACTTTGAGCATAAACTTTGCTTTTGGTTTTTCCAAAAGGTATCGTACCAATGGAGATTCTCCTTAATTAGTCAAGGTGGGACTCACTCCCCTCAAACGAAGTACACTATAGAGCCTCCCTGAGGCCTATGGAGCTCTCGAACAGTCTCTCCTTAATAGAGGCTTGACTCTTAAAGAGTCCTCAAACAAAGTACACCTTCGTCCGACACTTGAGTCACTTTTGACTACACCTTCGAGACTCACAAATTCTTTGTTCGACTTGTTCGACATTTGAGAATTATGTTGACATGGTTAAGTTAAAAGCACGACTCTGATACCATAGTATAAATCACAGACCTCCACAATGATATGATATTGTTCACTTTGAGCATAAACTCTCATGATTTTGCTTTTGGTTTTCCCTCTTATACCAATGGAGATGTATTCCTTATAAACCCATGATCATTTCCTTAATTAGCCAATGAGTGACTCCCTCCCAACAATCCTCCCCTCAAATAAAGTACACTATAAAGCCTCCCAACAATCCTCCCCCAACAATCCTCCCTTCGAACAAAGTACACTATATAGCCTGAGGCCTATGGGATCCTCGAACCGTCTCCCTTTTATCAAGGCTCGACGCTTTCTCTGGAGCCCTCGAAAAAAGTACATCTTTGTTTAACACTTGAGTCATTTTTTACTACACCTTCGAGACTCACAAATTCTTTATTTGACATTTGAGAATTTTGTTGACATGGTTAAGTTAAGGGCATTGATACCATGTTATAAATGATCAACTCACTGCATGTGGAGCATGCCTCACAAATTCTTTATTCGACATTTGAGAATCGTACTATGTGTGGGGTAAGTTGTTACTCCATTATCCATATTGGTTTTTAAGATCTCCAAAACACAAAAGTTTGGAGATTGTTTCATGTAAAGTTTTTATTACACAAGTCTCCTCTGCAAAAAAAGATTCCTGTTCTCTTTTACTACATACAAGCCAAAGTAGAGTCATAACAGAACTTAATTGTACGCCAGGTCTTTTGAAGGACTTTGTATCTTGTGATGTGGGGTGTCAAATGACTCACGGAAAATAGGCCACATCTTGTCTTAGGAAAGGAATACATCTCCATTGGTTTGAGATCATTTGGGAAAAATAAAAGTAAGACCGTGAAAGCTTTTGCTTAAAATGGACAATATCATACCATTGTGGAGAGTCGTGGTTCCTAACATGGTATCAGAGCCATACCCTTAACTTAGTCATGCTAATCGAATCTTCGAGTATCAAACAAAGAAATTGGTAGCCTCGAAGGTGTAGTCAAAAGTGACTCAACTGTCGAACAAAATGTGTACTTTATTCGAGAGCTCCCGATAAGAGTCGAGGCTTGATTAAGGGGAGGATGTTCAAGGGCTTCATAGGCCTCAAAGGAGGCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAAGATTGTTGGGAGAGAGTATATAAGTAAGGAATACGTCTCCATTGATATGAGACCTTTTGGGGAAACCAAAAGTAAAGTCACGAGAGCTTATGCTGAAAGTGGACCATTGTGAAGGTCCGTAGTTCCTAATAGTAGATTTCAAAATGGTTGATGGCTAAACGGTCGTCACCAAATTCATAACTAGTACCTTAGTTTTTGTTTTAAAAACCAATAAAGATATATAAATTGTTCAACAGGAACTTGAAAGCATGAACTGGATAGATGGGTTTTTGATTAATTGGATGTTTTGATTGTGAATCCAACAGGTGGGGGTGTGGGCCGAGCAAATTCCCATGGACATATTCGGACAAGGAGACATGCTATCTGCTAGAGGGAAAGGTCAAGGTTACTCCAGCAGGCTCAGATGAGGGGGTTGAGGTTGGCGCTGGGGATTTGGTTGTGTTCCCAGCGGGAATGAGCTGCACTTGGGATGTCTCAATTGCTGTGGATAAGCACTATAAGTTTGGTTAGTTGTATCTAAAGCCCTTTGTATGTTCATGAACTCCATTGCTCCTTTTTCTTGTTCAACCGAATCGAACCGAACCAAACCAAACCAAACTAAACTGGATTTGTAGGTTCTATTACGGAATTGTTTATGCCACATTTGAGTTTGATGCTCACAATTAGGAACCTAACCCTTTTTGTTTCCCCATACCCGTTGAATTCACTCCGAATTCGTCAACACAAACACAAATAAAATCATCGAATTGCACACATAGAAAGAAAACAAACTATTTCTATTTTTAGAGCTTAGGTATATGAAGAAAGAAGGTCTCTTTCGTCCCGTGGTTAGGACATTGTCTTTCCATGTTGAAGACGAGTTCTAATTAGGAATAGGTTCTCATTCCTGGCAAAAGTAATAAAGACTTGATTTTCAATTATCAAATAAAA

mRNA sequence

TAATTGATAATATAGCCCTAAAAATAGGGGAAATCAAATAGTGAGGATCTTGGGAGTTGCGATGGCTTCCGCAGTGAACGGATTCTCATTACTAAATTTAAAACCGCCCACTTCCCTCAGTAAACCCAGAAACGTCTCTTTGAACTTCGTGAAAAGGGCACCATCCCTTCAGATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAGTGGGGGTGTGGGCCGAGCAAATTCCCATGGACATATTCGGACAAGGAGACATGCTATCTGCTAGAGGGAAAGGTCAAGGTTACTCCAGCAGGCTCAGATGAGGGGGTTGAGGTTGGCGCTGGGGATTTGGTTGTGTTCCCAGCGGGAATGAGCTGCACTTGGGATGTCTCAATTGCTGTGGATAAGCACTATAAGTTTGGTTAGTTGTATCTAAAGCCCTTTGTATGTTCATGAACTCCATTGCTCCTTTTTCTTGTTCAACCGAATCGAACCGAACCAAACCAAACCAAACTAAACTGGATTTGTAGGTTCTATTACGGAATTGTTTATGCCACATTTGAGTTTGATGCTCACAATTAGGAACCTAACCCTTTTTGTTTCCCCATACCCGTTGAATTCACTCCGAATTCGTCAACACAAACACAAATAAAATCATCGAATTGCACACATAGAAAGAAAACAAACTATTTCTATTTTTAGAGCTTAGGTATATGAAGAAAGAAGGTCTCTTTCGTCCCGTGGTTAGGACATTGTCTTTCCATGTTGAAGACGAGTTCTAATTAGGAATAGGTTCTCATTCCTGGCAAAAGTAATAAAGACTTGATTTTCAATTATCAAATAAAA

Coding sequence (CDS)

ATGGCTTCCGCAGTGAACGGATTCTCATTACTAAATTTAAAACCGCCCACTTCCCTCAGTAAACCCAGAAACGTCTCTTTGAACTTCGTGAAAAGGGCACCATCCCTTCAGATTCGAGCCGATTCCATGGCGACTGAGAGGCTGGGCATCAAGGTTGAGAAGAATCCGCCTGAATCTAAGCTTACTGAACTCGGCGTTCGTCAATGGCCCAAGTGGGGGTGTGGGCCGAGCAAATTCCCATGGACATATTCGGACAAGGAGACATGCTATCTGCTAGAGGGAAAGGTCAAGGTTACTCCAGCAGGCTCAGATGAGGGGGTTGAGGTTGGCGCTGGGGATTTGGTTGTGTTCCCAGCGGGAATGAGCTGCACTTGGGATGTCTCAATTGCTGTGGATAAGCACTATAAGTTTGGTTAG

Protein sequence

MASAVNGFSLLNLKPPTSLSKPRNVSLNFVKRAPSLQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAGMSCTWDVSIAVDKHYKFG

Homology

[Close]

BLAST of CmaCh09G012080 vs. TrEMBL
Match: A0A0A0KVZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646710 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.3e-65
Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MASAVNGFSLLNLKPPTSLSKPRNVSLNFVKRAPSLQIRADSMATERLGIKVEKNPPESK 60
           MASAV+GF LLNLKP + L+KP NVSL F KRAPSLQIRADSMATERLGIKVEKNP ESK
Sbjct: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAG 120
           LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGS+E VE+GAGDLVVFP G
Sbjct: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120

Query: 121 MSCTWDVSIAVDKHYKF 138
           MSCTWDVS+AVDKHYKF
Sbjct: 121 MSCTWDVSVAVDKHYKF 137

[Close]

BLAST of CmaCh09G012080 vs. TrEMBL
Match: R0GXZ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002235mg PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.1e-45
Identity = 95/133 (71.43%), Postives = 106/133 (79.70%), Query Frame = 1


Query: 10  LLNLKPPTSLSKPRNVSLNFV--KRAPSLQ---IRADSMATERLGIKVEKNPPESKLTEL 69
           L+NL   TS++  R V  N +   R PS     IRA+SMATE+LGI VEKNPPESKLT+L
Sbjct: 6   LVNL---TSINPHRLVLTNKIYNSRRPSSSMAAIRAESMATEKLGITVEKNPPESKLTQL 65

Query: 70  GVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAGMSCT 129
           GVR WPKWGC PSKFPWTYS KETCYLLEGKVKV P GS+EGVE+ AGD VVFP GMSCT
Sbjct: 66  GVRNWPKWGCPPSKFPWTYSAKETCYLLEGKVKVYPEGSEEGVEIEAGDFVVFPKGMSCT 125

Query: 130 WDVSIAVDKHYKF 138
           WDVS+AVDKHY+F
Sbjct: 126 WDVSVAVDKHYQF 135

[Close]

BLAST of CmaCh09G012080 vs. TrEMBL
Match: W9RZP3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025166 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.9e-45
Identity = 84/100 (84.00%), Postives = 89/100 (89.00%), Query Frame = 1


Query: 38  IRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVK 97
           IRADSMATE+LGIK+EKNPPESKL +LGVR WPKWGC PSKFPWTY  KETCYLLEGKVK
Sbjct: 40  IRADSMATEKLGIKIEKNPPESKLAQLGVRNWPKWGCPPSKFPWTYDAKETCYLLEGKVK 99

Query: 98  VTPAGSDEGVEVGAGDLVVFPAGMSCTWDVSIAVDKHYKF 138
           VTPAGS E VE+GAGDLV FP GM+CTWDVS AVDKHY F
Sbjct: 100 VTPAGSTESVEIGAGDLVEFPKGMNCTWDVSAAVDKHYNF 139

[Close]

BLAST of CmaCh09G012080 vs. TrEMBL
Match: Q8LEK1_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-44
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 1


Query: 38  IRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVK 97
           IRA+SMATE+LGI +EKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLL+GKVK
Sbjct: 36  IRAESMATEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVK 95

Query: 98  VTPAGSDEGVEVGAGDLVVFPAGMSCTWDVSIAVDKHYKF 138
           V P GSDEGVE+ AGD VVFP GMSCTWDVS+AVDKHY+F
Sbjct: 96  VYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 135

[Close]

BLAST of CmaCh09G012080 vs. TrEMBL
Match: A0A0D3B7Z2_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-44
Identity = 86/125 (68.80%), Postives = 103/125 (82.40%), Query Frame = 1


Query: 17  TSLSKP---RNVSLNFVKRAPSLQ-IRADSMATERLGIKVEKNPPESKLTELGVRQWPKW 76
           T++ +P   R  +  ++ R PS+  IRA+S+ATE+LGI +EKNPPESKLT+LGVR WPKW
Sbjct: 12  TNIYRPVLTRTSNKPYITRGPSMAAIRAESVATEKLGIFIEKNPPESKLTQLGVRSWPKW 71

Query: 77  GCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAGMSCTWDVSIAVD 136
           GC PSKFPWTY  KETC+LLEGKVKV P GSDEGVE+ AGD V+FP GMSCTWDVS+AVD
Sbjct: 72  GCPPSKFPWTYDAKETCFLLEGKVKVYPDGSDEGVEIEAGDFVIFPKGMSCTWDVSVAVD 131

Query: 137 KHYKF 138
           KHY+F
Sbjct: 132 KHYQF 136

[Close]

BLAST of CmaCh09G012080 vs. TAIR10
Match: AT4G10300.1 (AT4G10300.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 3.2e-45
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 1


Query: 38  IRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVK 97
           IRA+S  TE+LGI +EKNPPESKLT+LGVR WPKWGC PSKFPWTYS KETCYLL+GKVK
Sbjct: 36  IRAES--TEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVK 95

Query: 98  VTPAGSDEGVEVGAGDLVVFPAGMSCTWDVSIAVDKHYKF 138
           V P GSDEGVE+ AGD VVFP GMSCTWDVS+AVDKHY+F
Sbjct: 96  VYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 133

[Close]

BLAST of CmaCh09G012080 vs. TAIR10
Match: AT3G04300.1 (AT3G04300.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1


Query: 48  LGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGV 107
           + I +E NP   +L++LGV  WPKW C P K+   + ++ETCYL++GKVKV P GS E V
Sbjct: 1   MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFV 60

Query: 108 EVGAGDLVVFPAGMSCTWDVSIAVDKHYKF 138
           E GAGDLV  P G+SCTWDVS+ +DKHYKF
Sbjct: 61  EFGAGDLVTIPKGLSCTWDVSLFIDKHYKF 90

[Close]

BLAST of CmaCh09G012080 vs. TAIR10
Match: AT4G28703.1 (AT4G28703.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-25
Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 1


Query: 43  MATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTP-- 102
           MA +   I VE+NP +++L EL  + WPKWGC P K+   Y  +E CY+L GKVKV P  
Sbjct: 1   MADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKP 60

Query: 103 ---AGSDEG----VEVGAGDLVVFPAGMSCTWDVSIAVDKHYKF 138
              + SD      VE GAGD+V FP G+SCTWDVS++VDKHY F
Sbjct: 61  PPSSSSDAEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104

[Close]

BLAST of CmaCh09G012080 vs. TAIR10
Match: AT4G10280.1 (AT4G10280.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 97.8 bits (242), Expect = 5.5e-21
Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 36  LQIRADS-MATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEG 95
           + + +DS + TE  G+K+ +   ++KL +LGV  WPKW   PSKFPW +   ET Y +EG
Sbjct: 33  VSVSSDSEIPTEIHGVKILRQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEG 92

Query: 96  KVKVTPAGSD---EGVEVGAGDLVVFPAGMSCTWDVSIAVDKHY 136
           KVKV   G D   E  E+G GD+VVFP  M   W+++ AV K Y
Sbjct: 93  KVKVNVDGYDEEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQY 136

[Close]

BLAST of CmaCh09G012080 vs. TAIR10
Match: AT4G10290.1 (AT4G10290.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-15
Identity = 44/101 (43.56%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 38  IRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVK 97
           I A  + TE  G+KV +   ++KL ELGV  W  W   P KFPW +   ET Y +EGK+K
Sbjct: 8   IFAPEVPTEIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLK 67

Query: 98  VTPAG---SDEGVEVGAGDLVVFPAGMSCTWDVSIAVDKHY 136
           V         E +E  AGDLVVFP  M+   DV   V K Y
Sbjct: 68  VKVEDHHKEGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108

[Close]

BLAST of CmaCh09G012080 vs. NCBI nr
Match: gi|449447523|ref|XP_004141517.1| (PREDICTED: uncharacterized protein LOC101218376 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 7.6e-65
Identity = 122/137 (89.05%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MASAVNGFSLLNLKPPTSLSKPRNVSLNFVKRAPSLQIRADSMATERLGIKVEKNPPESK 60
           MASAV+GF LLNLKP + L+KP NVSL F KRAPSLQIRADSMATERLGIKVEKNP ESK
Sbjct: 1   MASAVDGFLLLNLKPQSLLTKPTNVSLYFGKRAPSLQIRADSMATERLGIKVEKNPSESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAG 120
           LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGS+E VE+GAGDLVVFP G
Sbjct: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSNESVEIGAGDLVVFPKG 120

Query: 121 MSCTWDVSIAVDKHYKF 138
           MSCTWDVS+AVDKHYKF
Sbjct: 121 MSCTWDVSVAVDKHYKF 137

[Close]

BLAST of CmaCh09G012080 vs. NCBI nr
Match: gi|659119135|ref|XP_008459495.1| (PREDICTED: uncharacterized protein LOC103498612 [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-63
Identity = 120/138 (86.96%), Postives = 126/138 (91.30%), Query Frame = 1


Query: 1   MASAVNGFSLLNLKPPTSLSKPRNVSLNFVKRAPSLQIRADSMATERLGIKVEKNPPESK 60
           MASAV+GF  LNLKP + L+KP NVSL F KRA SLQIRADSMATERLGIKVEKNP ESK
Sbjct: 1   MASAVDGFLCLNLKPRSLLTKPTNVSLYFGKRAQSLQIRADSMATERLGIKVEKNPSESK 60

Query: 61  LTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAG 120
           L+ELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDE VE+GAGDLVVFP G
Sbjct: 61  LSELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDESVEIGAGDLVVFPKG 120

Query: 121 MSCTWDVSIAVDKHYKFG 139
           MSCTWDVS+AVDKHY FG
Sbjct: 121 MSCTWDVSVAVDKHYNFG 138

[Close]

BLAST of CmaCh09G012080 vs. NCBI nr
Match: gi|568849055|ref|XP_006478291.1| (PREDICTED: uncharacterized protein LOC102607448 [Citrus sinensis])

HSP 1 Score: 198.4 bits (503), Expect = 8.4e-48
Identity = 98/141 (69.50%), Postives = 113/141 (80.14%), Query Frame = 1


Query: 3   SAVNGFSLLNLKPPT--SLSKPRNVSLNFVKRAPSLQIRADSMAT---ERLGIKVEKNPP 62
           + V+  S L LK PT    SKP   S +F  R   + +RA++M+T   E+LG+K+E+NPP
Sbjct: 2   ACVSSSSFLLLKQPTFSPRSKP---SSHFSTRRRVVVVRAEAMSTTTIEKLGVKIERNPP 61

Query: 63  ESKLTELGVRQWPKWGCGPSKFPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVF 122
           ESKLTELGVRQWPKWGC PSKFPWTYSDKETCYLLEGKVKV P GS+EGVE+GAGDLVVF
Sbjct: 62  ESKLTELGVRQWPKWGCPPSKFPWTYSDKETCYLLEGKVKVYPDGSNEGVEIGAGDLVVF 121

Query: 123 PAGMSCTWDVSIAVDKHYKFG 139
           P GMSCTWDVS+ VDKHYKFG
Sbjct: 122 PKGMSCTWDVSVGVDKHYKFG 139

[Close]

BLAST of CmaCh09G012080 vs. NCBI nr
Match: gi|729296097|ref|XP_010542415.1| (PREDICTED: uncharacterized protein LOC104815631 [Tarenaya hassleriana])

HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47
Identity = 87/107 (81.31%), Postives = 98/107 (91.59%), Query Frame = 1


Query: 31  KRAPSLQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSKFPWTYSDKETCY 90
           +R  + +IRA+SMATE+LGIK+EKNPPE++LTELGVR WPKWGC PSKFPWTYS KETC+
Sbjct: 34  RRTATARIRAESMATEKLGIKIEKNPPETRLTELGVRNWPKWGCPPSKFPWTYSAKETCF 93

Query: 91  LLEGKVKVTPAGSDEGVEVGAGDLVVFPAGMSCTWDVSIAVDKHYKF 138
           LLEGKVKV P GSDEGVE+GAGDLVVFP GMSCTWDVS+AVDKHYKF
Sbjct: 94  LLEGKVKVYPDGSDEGVEIGAGDLVVFPKGMSCTWDVSVAVDKHYKF 140

[Close]

BLAST of CmaCh09G012080 vs. NCBI nr
Match: gi|727421617|ref|XP_010437254.1| (PREDICTED: uncharacterized protein LOC104721044 [Camelina sativa])

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 1


Query: 19  LSKPRNVSLNFVKRAPSLQIRADSMATERLGIKVEKNPPESKLTELGVRQWPKWGCGPSK 78
           L++  N S N  + +    IRA+SMATE+LGI +EKNPPESKLT+LGVR WPKWGC PSK
Sbjct: 19  LTRTSNKSYNSRRPSSMAAIRAESMATEKLGITIEKNPPESKLTQLGVRNWPKWGCPPSK 78

Query: 79  FPWTYSDKETCYLLEGKVKVTPAGSDEGVEVGAGDLVVFPAGMSCTWDVSIAVDKHYKF 138
           FPWTYS KETCYLLEGKVKV P GS+EGVE+ AGD VVFP GMSCTWDVS+AVDKHY+F
Sbjct: 79  FPWTYSSKETCYLLEGKVKVYPDGSEEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 137

The following BLAST results are available for this feature:

BLAST of CmaCh09G012080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G012080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVZ0_CUCSA	5.3e-65	89.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646710 PE=4 SV=1	[more]
R0GXZ3_9BRAS	6.1e-45	71.43	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002235mg PE=4 SV=1	[more]
W9RZP3_9ROSA	7.9e-45	84.00	Uncharacterized protein OS=Morus notabilis GN=L484_025166 PE=4 SV=1	[more]
Q8LEK1_ARATH	1.4e-44	83.00	Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1	[more]
A0A0D3B7Z2_BRAOL	3.0e-44	68.80	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of CmaCh09G012080 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10300.1	3.2e-45	81.00	RmlC-like cupins superfamily protein	[more]
AT3G04300.1	1.4e-29	57.78	RmlC-like cupins superfamily protein	[more]
AT4G28703.1	2.1e-25	51.92	RmlC-like cupins superfamily protein	[more]
AT4G10280.1	5.5e-21	45.19	RmlC-like cupins superfamily protein	[more]
AT4G10290.1	3.4e-15	43.56	RmlC-like cupins superfamily protein	[more]

BLAST of CmaCh09G012080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447523\|ref\|XP_004141517.1\|	7.6e-65	89.05	PREDICTED: uncharacterized protein LOC101218376 [Cucumis sativus]	[more]
gi\|659119135\|ref\|XP_008459495.1\|	1.9e-63	86.96	PREDICTED: uncharacterized protein LOC103498612 [Cucumis melo]	[more]
gi\|568849055\|ref\|XP_006478291.1\|	8.4e-48	69.50	PREDICTED: uncharacterized protein LOC102607448 [Citrus sinensis]	[more]
gi\|729296097\|ref\|XP_010542415.1\|	3.2e-47	81.31	PREDICTED: uncharacterized protein LOC104815631 [Tarenaya hassleriana]	[more]
gi\|727421617\|ref\|XP_010437254.1\|	1.8e-45	73.11	PREDICTED: uncharacterized protein LOC104721044 [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008579	DUF861_Cupin_3
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G012080.1	CmaCh09G012080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008579	Domain of unknown function DUF861, cupin-3	PFAM	PF05899	Cupin_3	coord: 62..135 score: 3.7
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 60..128 score: 3.21
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 47..137 score: 7.3
None	No IPR available	PANTHER	PTHR33271	FAMILY NOT NAMED	coord: 5..137 score: 1.5
None	No IPR available	PANTHER	PTHR33271:SF6	SUBFAMILY NOT NAMED	coord: 5..137 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G012080	Cucsa.237860	Cucumber (Gy14) v1	cgycmaB0658
CmaCh09G012080	Cla012370	Watermelon (97103) v1	cmawmB017
CmaCh09G012080	Csa5G646710	Cucumber (Chinese Long) v2	cmacuB031
CmaCh09G012080	MELO3C022114	Melon (DHL92) v3.5.1	cmameB011
CmaCh09G012080	ClCG08G001910	Watermelon (Charleston Gray)	cmawcgB032
CmaCh09G012080	CSPI05G30250	Wild cucumber (PI 183967)	cmacpiB031
CmaCh09G012080	CmoCh09G011990	Cucurbita moschata (Rifu)	cmacmoB030
CmaCh09G012080	Lsi08G001900	Bottle gourd (USVL1VR-Ls)	cmalsiB035
CmaCh09G012080	Cp4.1LG06g09780	Cucurbita pepo (Zucchini)	cmacpeB064
CmaCh09G012080	MELO3C022114.2	Melon (DHL92) v3.6.1	cmamedB012
CmaCh09G012080	CsaV3_5G039360	Cucumber (Chinese Long) v3	cmacucB0038
CmaCh09G012080	Cla97C08G145990	Watermelon (97103) v2	cmawmbB038
CmaCh09G012080	Bhi06G000111	Wax gourd	cmawgoB0011
CmaCh09G012080	CsGy5G029640	Cucumber (Gy14) v2	cgybcmaB580

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G012080	Watermelon (97103) v1	cmawmB016
CmaCh09G012080	Cucurbita maxima (Rimu)	cmacmaB048
CmaCh09G012080	Cucurbita moschata (Rifu)	cmacmoB046